Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57960.t1 | XP_013458562.1 | 94.2 | 327 | 1 | 1 | 1 | 309 | 1 | 327 | 2.50E-155 | 558.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57960.t1 | P26360 | 80.1 | 327 | 46 | 3 | 1 | 309 | 1 | 326 | 1.4e-135 | 483.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57960.t1 | A0A072UU27 | 94.2 | 327 | 1 | 1 | 1 | 309 | 1 | 327 | 1.8e-155 | 558.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene055477 | MS.gene57960 | 0.857186 | 1.94E-62 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene02393 | MS.gene57960 | PPI |
| MS.gene57960 | MS.gene73458 | PPI |
| MS.gene57960 | MS.gene75019 | PPI |
| MS.gene029509 | MS.gene57960 | PPI |
| MS.gene029511 | MS.gene57960 | PPI |
| MS.gene57960 | MS.gene71744 | PPI |
| MS.gene57960 | MS.gene029510 | PPI |
| MS.gene57960 | MS.gene75018 | PPI |
| MS.gene029508 | MS.gene57960 | PPI |
| MS.gene57960 | MS.gene00829 | PPI |
| MS.gene57960 | MS.gene002950 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57960.t1 | MTR_4g129790 | 94.190 | 327 | 1 | 1 | 1 | 309 | 1 | 327 | 0.0 | 614 |
| MS.gene57960.t1 | MTR_3g052270 | 28.395 | 324 | 176 | 10 | 34 | 307 | 30 | 347 | 1.66e-25 | 104 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57960.t1 | AT2G33040 | 78.571 | 322 | 53 | 2 | 1 | 307 | 1 | 321 | 0.0 | 513 |
| MS.gene57960.t1 | AT4G04640 | 30.189 | 318 | 175 | 8 | 34 | 306 | 56 | 371 | 1.06e-29 | 116 |
| MS.gene57960.t1 | AT1G15700 | 28.000 | 325 | 176 | 9 | 34 | 307 | 66 | 383 | 2.19e-25 | 104 |
Find 69 sgRNAs with CRISPR-Local
Find 323 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGTTCTATTTCCACTCAAAT+TGG | 0.218648 | 8.4:-5108021 | MS.gene57960:intron |
| ACATACTTTGTCTCTTTATC+AGG | 0.264351 | 8.4:+5106931 | None:intergenic |
| GCCTTGAGCAAGTTGAATTC+TGG | 0.280287 | 8.4:-5107240 | MS.gene57960:intron |
| TACAGAGATCAATCTTCTAT+TGG | 0.285686 | 8.4:-5108051 | MS.gene57960:intron |
| TGGTTTGTGGCAGCCATTTA+CGG | 0.342195 | 8.4:-5107782 | MS.gene57960:CDS |
| AGAGACAAAGTATGTCATAT+TGG | 0.347992 | 8.4:-5106923 | MS.gene57960:CDS |
| TTGTACGTACGCAAGAAAAC+TGG | 0.369183 | 8.4:+5105788 | None:intergenic |
| GTCTGACCCTCACTTATAAT+AGG | 0.386053 | 8.4:-5103756 | MS.gene57960:intron |
| GAGACAAAGTATGTCATATT+GGG | 0.404543 | 8.4:-5106922 | MS.gene57960:CDS |
| TCACCGAGAAGAGCCGTAAA+TGG | 0.407251 | 8.4:+5107769 | None:intergenic |
| CAGCCATTTACGGCTCTTCT+CGG | 0.412957 | 8.4:-5107772 | MS.gene57960:CDS |
| CTGAAAATTCACGTGGTTTG+TGG | 0.419923 | 8.4:-5107795 | MS.gene57960:CDS |
| GACAGCTCTAGCAGGAATGC+TGG | 0.431443 | 8.4:-5103793 | MS.gene57960:CDS |
| TGGAGGAAGTCTCGGTGAAC+TGG | 0.443236 | 8.4:-5105872 | MS.gene57960:CDS |
| CCTTGCTCCTTGCTCACTGC+AGG | 0.446628 | 8.4:+5103828 | None:intergenic |
| GAATTGATTGAGATTATCTC+TGG | 0.446916 | 8.4:-5103554 | MS.gene57960:CDS |
| TTGTTTGTGCAGTGAGAAAT+CGG | 0.465696 | 8.4:-5107903 | MS.gene57960:intron |
| TCTTCAGACAAAGGTCTTTG+TGG | 0.469713 | 8.4:-5107297 | MS.gene57960:CDS |
| AGAGATCAATCTTCTATTGG+AGG | 0.475794 | 8.4:-5108048 | MS.gene57960:CDS |
| AAGACCTTTGTCTGAAGAAA+CGG | 0.482952 | 8.4:+5107302 | None:intergenic |
| CTGGATTCGTATGAGATTGA+AGG | 0.483416 | 8.4:-5105853 | MS.gene57960:CDS |
| CCACGTCTGTCAAGATAAGC+AGG | 0.495862 | 8.4:-5107263 | MS.gene57960:CDS |
| ACAGCTCTAGCAGGAATGCT+GGG | 0.501839 | 8.4:-5103792 | MS.gene57960:CDS |
| CATGTAGATTGTTGAAAGAG+AGG | 0.506420 | 8.4:-5105902 | MS.gene57960:intron |
| GTTGAAAGAGAGGCTGAAGC+TGG | 0.508534 | 8.4:-5105892 | MS.gene57960:CDS |
| AACTACGTGCTGTTCAAACC+AGG | 0.516036 | 8.4:-5107819 | MS.gene57960:CDS |
| CCGACGCGAAGGGAAGCGTT+TGG | 0.523663 | 8.4:-5108217 | MS.gene57960:CDS |
| CTGCCATGGACAGCTCTAGC+AGG | 0.525991 | 8.4:-5103801 | MS.gene57960:CDS |
| GAATATTCAGAAAATTACTA+AGG | 0.532506 | 8.4:-5107866 | MS.gene57960:CDS |
| GCTGAAGCTGGAGGAAGTCT+CGG | 0.540570 | 8.4:-5105880 | MS.gene57960:CDS |
| TCTGGAGCATCAGCACTGAC+AGG | 0.540615 | 8.4:-5103536 | MS.gene57960:CDS |
| GCTGCTGCACTCCGACGCGA+AGG | 0.542082 | 8.4:-5108228 | MS.gene57960:CDS |
| AATTACTAAGGCTATGAAGA+TGG | 0.542804 | 8.4:-5107854 | MS.gene57960:CDS |
| TGGATTCGTATGAGATTGAA+GGG | 0.556021 | 8.4:-5105852 | MS.gene57960:CDS |
| TCAGACAAAGGTCTTTGTGG+TGG | 0.558554 | 8.4:-5107294 | MS.gene57960:CDS |
| GTATGTCATATTGGGAGAGA+AGG | 0.558989 | 8.4:-5106914 | MS.gene57960:CDS |
| AATGAAAGTACCAATTTGAG+TGG | 0.565521 | 8.4:+5108011 | None:intergenic |
| GAGAATGCCTGCAGTGAGCA+AGG | 0.566041 | 8.4:-5103835 | MS.gene57960:CDS |
| AAAGATACCTATTATAAGTG+AGG | 0.568709 | 8.4:+5103749 | None:intergenic |
| CTGCTGCACTCCGACGCGAA+GGG | 0.583053 | 8.4:-5108227 | MS.gene57960:CDS |
| AAGATACCTATTATAAGTGA+GGG | 0.587593 | 8.4:+5103750 | None:intergenic |
| GGTCATGTTCAATGCGGTGT+TGG | 0.590854 | 8.4:-5103857 | MS.gene57960:CDS |
| CGTTGTACAATTTCTACCAA+CGG | 0.590879 | 8.4:-5106146 | MS.gene57960:CDS |
| GATAATCTCAATCAATTCAG+TGG | 0.592679 | 8.4:+5103559 | None:intergenic |
| AGGAGCAAGGATGTCTGCCA+TGG | 0.594950 | 8.4:-5103815 | MS.gene57960:CDS |
| GAATCTCAAATCGATGGCGA+TGG | 0.602234 | 8.4:-5108250 | None:intergenic |
| GAATCCTCTGAATTATACTC+AGG | 0.606536 | 8.4:-5106827 | MS.gene57960:intron |
| ATTACCGTTTCTTCAGACAA+AGG | 0.610426 | 8.4:-5107306 | MS.gene57960:CDS |
| ATTCCTGCTAGAGCTGTCCA+TGG | 0.613830 | 8.4:+5103798 | None:intergenic |
| GAAAGAGAGGCTGAAGCTGG+AGG | 0.621120 | 8.4:-5105889 | MS.gene57960:CDS |
| CCTGCAGTGAGCAAGGAGCA+AGG | 0.624108 | 8.4:-5103828 | MS.gene57960:CDS |
| CTAACCTGAGTATAATTCAG+AGG | 0.633689 | 8.4:+5106823 | None:intergenic |
| CAGCTCTAGCAGGAATGCTG+GGG | 0.652373 | 8.4:-5103791 | MS.gene57960:CDS |
| CATATTGGGAGAGAAGGCTA+AGG | 0.655816 | 8.4:-5106908 | MS.gene57960:CDS |
| CCTGCTTATCTTGACAGACG+TGG | 0.656536 | 8.4:+5107263 | None:intergenic |
| ACCAGAATTCAACTTGCTCA+AGG | 0.662579 | 8.4:+5107239 | None:intergenic |
| TACGCAAGAAAACTGGAACT+CGG | 0.672354 | 8.4:+5105795 | None:intergenic |
| CACGTCTGTCAAGATAAGCA+GGG | 0.673248 | 8.4:-5107262 | MS.gene57960:CDS |
| CCAAACGCTTCCCTTCGCGT+CGG | 0.680197 | 8.4:+5108217 | None:intergenic |
| ACCAGGGCTGAAAATTCACG+TGG | 0.682606 | 8.4:-5107802 | MS.gene57960:CDS |
| GATAGTATAGTTGACACCGT+TGG | 0.683787 | 8.4:+5106130 | None:intergenic |
| GGTGGTTGAGAAGACATGAG+AGG | 0.688310 | 8.4:+5108192 | None:intergenic |
| GGATTCGTATGAGATTGAAG+GGG | 0.696951 | 8.4:-5105851 | MS.gene57960:CDS |
| ACTACGTGCTGTTCAAACCA+GGG | 0.699734 | 8.4:-5107818 | MS.gene57960:CDS |
| GATTCGTATGAGATTGAAGG+GGG | 0.707101 | 8.4:-5105850 | MS.gene57960:CDS |
| CGTTGGTAGAAATTGTACAA+CGG | 0.712891 | 8.4:+5106147 | None:intergenic |
| TATATAGGTCATGTTCAATG+CGG | 0.738383 | 8.4:-5103863 | MS.gene57960:intron |
| AATAGATGAAAGTACCTCGG+GGG | 0.741176 | 8.4:+5106108 | None:intergenic |
| ACGTGGAGTATGATGCACTG+AGG | 0.781586 | 8.4:-5106192 | MS.gene57960:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAAAAAATAAAAAATTA+GGG | + | chr8.4:5103796-5103815 | None:intergenic | 0.0% |
| !! | AACAATTAAAACTAAACAAT+GGG | + | chr8.4:5105516-5105535 | None:intergenic | 15.0% |
| !! | CAAATTGTAACAAAATAAAA+AGG | + | chr8.4:5104056-5104075 | None:intergenic | 15.0% |
| !! | TTAAGGAATATTGAAAAATA+TGG | - | chr8.4:5105038-5105057 | MS.gene57960:intron | 15.0% |
| !! | TTGAAATTATATACAACATT+CGG | - | chr8.4:5107091-5107110 | MS.gene57960:intron | 15.0% |
| !!! | ATACTTTATTTGTTGTATAT+AGG | - | chr8.4:5107891-5107910 | MS.gene57960:CDS | 15.0% |
| !!! | TCCTAAATTAAATTGTTTTA+AGG | - | chr8.4:5105021-5105040 | MS.gene57960:intron | 15.0% |
| !!! | TCCTTAAAACAATTTAATTT+AGG | + | chr8.4:5105025-5105044 | None:intergenic | 15.0% |
| !! | AAGTATAAAAGAAACGAAAA+AGG | + | chr8.4:5107354-5107373 | None:intergenic | 20.0% |
| !! | AGATATATATGTAAAACACA+AGG | + | chr8.4:5105106-5105125 | None:intergenic | 20.0% |
| !! | ATAAGTATAATTTGAAAGAG+AGG | + | chr8.4:5107865-5107884 | None:intergenic | 20.0% |
| !! | CAACAATTAAAACTAAACAA+TGG | + | chr8.4:5105517-5105536 | None:intergenic | 20.0% |
| !! | CGAAATAACTAAGTATAAAT+AGG | + | chr8.4:5106669-5106688 | None:intergenic | 20.0% |
| !! | CGTTATCTTATAAACAATTT+AGG | + | chr8.4:5104735-5104754 | None:intergenic | 20.0% |
| !! | GAATATTCAGAAAATTACTA+AGG | - | chr8.4:5103903-5103922 | MS.gene57960:intron | 20.0% |
| !! | TAACTAAGTATAAATAGGTA+CGG | + | chr8.4:5106664-5106683 | None:intergenic | 20.0% |
| !! | TAGAAAACAAAGTTTACAAT+TGG | - | chr8.4:5105125-5105144 | MS.gene57960:intron | 20.0% |
| !! | TAGAATATAAAATGCTATCT+GGG | - | chr8.4:5106187-5106206 | MS.gene57960:CDS | 20.0% |
| !! | TTAAGATGATTATGATTTCA+TGG | - | chr8.4:5106383-5106402 | MS.gene57960:intron | 20.0% |
| !! | TTCAATATTCAACAACAAAA+AGG | + | chr8.4:5105318-5105337 | None:intergenic | 20.0% |
| !! | TTTATCATTATAAACTTGAC+AGG | + | chr8.4:5107565-5107584 | None:intergenic | 20.0% |
| !!! | AAAACTTATTTTGCAATATC+AGG | - | chr8.4:5105792-5105811 | MS.gene57960:intron | 20.0% |
| !!! | AATTTTAAAAAATGAAGGTC+CGG | + | chr8.4:5106862-5106881 | None:intergenic | 20.0% |
| !!! | GTTTTAATTGTTGTATTTTC+AGG | - | chr8.4:5105524-5105543 | MS.gene57960:intron | 20.0% |
| !!! | TAAATTTTTTGACTGTGTTA+TGG | - | chr8.4:5103833-5103852 | MS.gene57960:CDS | 20.0% |
| !!! | TATTGCAAAATAAGTTTTCA+TGG | + | chr8.4:5105790-5105809 | None:intergenic | 20.0% |
| !!! | TTTAGACAAATTTTTTGTTC+TGG | - | chr8.4:5108081-5108100 | MS.gene57960:intron | 20.0% |
| !!! | TTTTGATCAAAATAGTAGAA+GGG | - | chr8.4:5106747-5106766 | MS.gene57960:intron | 20.0% |
| ! | AAAATTTGGTATAGAGAGTA+AGG | + | chr8.4:5106248-5106267 | None:intergenic | 25.0% |
| ! | AAAGATACCTATTATAAGTG+AGG | + | chr8.4:5108023-5108042 | None:intergenic | 25.0% |
| ! | AAATCCACAATGAATGTTTA+AGG | + | chr8.4:5105415-5105434 | None:intergenic | 25.0% |
| ! | AAGATACCTATTATAAGTGA+GGG | + | chr8.4:5108022-5108041 | None:intergenic | 25.0% |
| ! | AATCAATAAGCACAATATTC+AGG | + | chr8.4:5107763-5107782 | None:intergenic | 25.0% |
| ! | AATGAAGAGGTTAATTGAAA+AGG | + | chr8.4:5103688-5103707 | None:intergenic | 25.0% |
| ! | ACTAATTCAAATTGACGAAA+TGG | + | chr8.4:5106054-5106073 | None:intergenic | 25.0% |
| ! | ATAATATGGGTGAAGTAATA+AGG | - | chr8.4:5107207-5107226 | MS.gene57960:intron | 25.0% |
| ! | ATCATAATCATCTTAATGCA+AGG | + | chr8.4:5106379-5106398 | None:intergenic | 25.0% |
| ! | ATTAGAGGATGCATATAATA+TGG | - | chr8.4:5107193-5107212 | MS.gene57960:intron | 25.0% |
| ! | CCAAATAAAACTATGTAGTT+GGG | + | chr8.4:5107651-5107670 | None:intergenic | 25.0% |
| ! | CTAATTCAAATTGACGAAAT+GGG | + | chr8.4:5106053-5106072 | None:intergenic | 25.0% |
| ! | CTAGAATATAAAATGCTATC+TGG | - | chr8.4:5106186-5106205 | MS.gene57960:CDS | 25.0% |
| ! | CTAGATATATGTAAAACACA+AGG | + | chr8.4:5104988-5105007 | None:intergenic | 25.0% |
| ! | GTAATAGAAATGAAATGAAG+AGG | + | chr8.4:5103701-5103720 | None:intergenic | 25.0% |
| ! | TAATATGGGTGAAGTAATAA+GGG | - | chr8.4:5107208-5107227 | MS.gene57960:intron | 25.0% |
| ! | TCCAAATAAAACTATGTAGT+TGG | + | chr8.4:5107652-5107671 | None:intergenic | 25.0% |
| ! | TCCTATTCATCAAAAATCAA+GGG | + | chr8.4:5104326-5104345 | None:intergenic | 25.0% |
| ! | TCCTTATAACAAACTAATTC+AGG | + | chr8.4:5105152-5105171 | None:intergenic | 25.0% |
| ! | TGATATCACTTTACTTTCAA+AGG | - | chr8.4:5106444-5106463 | MS.gene57960:intron | 25.0% |
| ! | TTAGAGGATGCATATAATAT+GGG | - | chr8.4:5107194-5107213 | MS.gene57960:intron | 25.0% |
| ! | TTCAATATTCAACAACAAAG+AGG | + | chr8.4:5105290-5105309 | None:intergenic | 25.0% |
| ! | TTCCTATTCATCAAAAATCA+AGG | + | chr8.4:5104327-5104346 | None:intergenic | 25.0% |
| ! | TTGTATGATTGTGCAATAAT+TGG | - | chr8.4:5104100-5104119 | MS.gene57960:intron | 25.0% |
| ! | TTTAAGGAAAATGCTTTCTT+TGG | + | chr8.4:5105399-5105418 | None:intergenic | 25.0% |
| !! | CAGATAGCATTTTATATTCT+AGG | + | chr8.4:5106188-5106207 | None:intergenic | 25.0% |
| !! | CTTTTGATCAAAATAGTAGA+AGG | - | chr8.4:5106746-5106765 | MS.gene57960:intron | 25.0% |
| !! | GATCAAAAGCAAGATAATTT+TGG | + | chr8.4:5106735-5106754 | None:intergenic | 25.0% |
| !! | TAGATATTTTCAAAACCACT+AGG | + | chr8.4:5106518-5106537 | None:intergenic | 25.0% |
| !! | TTGTAGTTAGTTGATATTGT+TGG | - | chr8.4:5107145-5107164 | MS.gene57960:intron | 25.0% |
| !! | TTTTCCTTAAACATTCATTG+TGG | - | chr8.4:5105408-5105427 | MS.gene57960:intron | 25.0% |
| !!! | AAACTTGTTACAAAGTCAAT+AGG | + | chr8.4:5106350-5106369 | None:intergenic | 25.0% |
| !!! | ATATTTTGAGATTCTGGTAA+TGG | - | chr8.4:5104783-5104802 | MS.gene57960:intron | 25.0% |
| !!! | ATTTTAAAAAATGAAGGTCC+GGG | + | chr8.4:5106861-5106880 | None:intergenic | 25.0% |
| !!! | CGGCAAATTTTAAAAAATGA+AGG | + | chr8.4:5106867-5106886 | None:intergenic | 25.0% |
| !!! | TCCTGAATTAGTTTGTTATA+AGG | - | chr8.4:5105148-5105167 | MS.gene57960:intron | 25.0% |
| !!! | TTTAATAGATGAAAGTACCT+CGG | + | chr8.4:5105667-5105686 | None:intergenic | 25.0% |
| AAATACAAGTGATGCAATTG+TGG | + | chr8.4:5104619-5104638 | None:intergenic | 30.0% | |
| AACAGTATTTCACATTGCAA+AGG | + | chr8.4:5104704-5104723 | None:intergenic | 30.0% | |
| AAGTATAAATAGGTACGGTT+CGG | + | chr8.4:5106659-5106678 | None:intergenic | 30.0% | |
| AATATGGACATTGCTCTTAA+TGG | - | chr8.4:5105054-5105073 | MS.gene57960:intron | 30.0% | |
| AATATGGGTGAAGTAATAAG+GGG | - | chr8.4:5107209-5107228 | MS.gene57960:intron | 30.0% | |
| AATTACTAAGGCTATGAAGA+TGG | - | chr8.4:5103915-5103934 | MS.gene57960:intron | 30.0% | |
| ACATACTTTGTCTCTTTATC+AGG | + | chr8.4:5104841-5104860 | None:intergenic | 30.0% | |
| ACTGACCATTTAATTATGAG+AGG | - | chr8.4:5107417-5107436 | MS.gene57960:intron | 30.0% | |
| ACTTGACAATATTTCATGTC+AGG | + | chr8.4:5105734-5105753 | None:intergenic | 30.0% | |
| AGAGACAAAGTATGTCATAT+TGG | - | chr8.4:5104846-5104865 | MS.gene57960:intron | 30.0% | |
| AGTTACTGATGCAATTATAC+AGG | + | chr8.4:5108112-5108131 | None:intergenic | 30.0% | |
| ATATTCAACAACAAAAAGGC+AGG | + | chr8.4:5105314-5105333 | None:intergenic | 30.0% | |
| ATTCAAAATATGACACTGCA+AGG | - | chr8.4:5106105-5106124 | MS.gene57960:intron | 30.0% | |
| CTAAACAATGGGTATATACT+CGG | + | chr8.4:5105505-5105524 | None:intergenic | 30.0% | |
| CTCAATAAAAAAGCAGCAAA+AGG | + | chr8.4:5107802-5107821 | None:intergenic | 30.0% | |
| CTGACCATTTAATTATGAGA+GGG | - | chr8.4:5107418-5107437 | MS.gene57960:intron | 30.0% | |
| CTTGACAATATTTCATGTCA+GGG | + | chr8.4:5105733-5105752 | None:intergenic | 30.0% | |
| CTTGTTAACACAAAAGAATC+AGG | + | chr8.4:5107722-5107741 | None:intergenic | 30.0% | |
| GAAAATATGAACAACACTTG+AGG | + | chr8.4:5107279-5107298 | None:intergenic | 30.0% | |
| GAATTGATTGAGATTATCTC+TGG | - | chr8.4:5108215-5108234 | MS.gene57960:CDS | 30.0% | |
| GAGACAAAGTATGTCATATT+GGG | - | chr8.4:5104847-5104866 | MS.gene57960:intron | 30.0% | |
| GAGTATATATGAACTCTGAA+TGG | + | chr8.4:5107047-5107066 | None:intergenic | 30.0% | |
| GATAATCTCAATCAATTCAG+TGG | + | chr8.4:5108213-5108232 | None:intergenic | 30.0% | |
| GATGATTATGATTTCATGGA+TGG | - | chr8.4:5106387-5106406 | MS.gene57960:intron | 30.0% | |
| GGGAAAAACTTCATTACAAT+AGG | + | chr8.4:5105705-5105724 | None:intergenic | 30.0% | |
| GGTTCTGTTTATATTCTTTC+AGG | - | chr8.4:5104415-5104434 | MS.gene57960:intron | 30.0% | |
| GTTAGATAACTAGTTAGAGA+CGG | - | chr8.4:5107167-5107186 | MS.gene57960:intron | 30.0% | |
| TACAGAGATCAATCTTCTAT+TGG | - | chr8.4:5103718-5103737 | MS.gene57960:intron | 30.0% | |
| TAGAGGAAAGTGAGAAAATT+TGG | + | chr8.4:5106262-5106281 | None:intergenic | 30.0% | |
| TATATACAACATTCGGTATC+TGG | - | chr8.4:5107098-5107117 | MS.gene57960:intron | 30.0% | |
| TATATAGGTCATGTTCAATG+CGG | - | chr8.4:5107906-5107925 | MS.gene57960:intron | 30.0% | |
| TTAGATAACTAGTTAGAGAC+GGG | - | chr8.4:5107168-5107187 | MS.gene57960:intron | 30.0% | |
| TTGAAATTGCAGACAATTGT+GGG | + | chr8.4:5104643-5104662 | None:intergenic | 30.0% | |
| TTGACAATATTTCATGTCAG+GGG | + | chr8.4:5105732-5105751 | None:intergenic | 30.0% | |
| ! | ACCCTTGATTTTTGATGAAT+AGG | - | chr8.4:5104322-5104341 | MS.gene57960:intron | 30.0% |
| ! | ATTGTAATGAAGTTTTTCCC+AGG | - | chr8.4:5105705-5105724 | MS.gene57960:intron | 30.0% |
| ! | TTTTCCGACTGAATATAATG+TGG | - | chr8.4:5105218-5105237 | MS.gene57960:intron | 30.0% |
| !! | AAAGAGGTTTTAATGTCACT+GGG | + | chr8.4:5105274-5105293 | None:intergenic | 30.0% |
| !! | AATGAAAGTACCAATTTGAG+TGG | + | chr8.4:5103761-5103780 | None:intergenic | 30.0% |
| !! | TTAATAGATGAAAGTACCTC+GGG | + | chr8.4:5105666-5105685 | None:intergenic | 30.0% |
| !!! | AAAGGTTCTAAATTTTGTCG+GGG | + | chr8.4:5104686-5104705 | None:intergenic | 30.0% |
| !!! | CAAAGGTTCTAAATTTTGTC+GGG | + | chr8.4:5104687-5104706 | None:intergenic | 30.0% |
| !!! | CCCAACTACATAGTTTTATT+TGG | - | chr8.4:5107648-5107667 | MS.gene57960:intron | 30.0% |
| !!! | GCAAAGGTTCTAAATTTTGT+CGG | + | chr8.4:5104688-5104707 | None:intergenic | 30.0% |
| !!! | GCTGAAATATTTTGAGATTC+TGG | - | chr8.4:5104777-5104796 | MS.gene57960:intron | 30.0% |
| AAAAGAATCAGGAACAAGGT+TGG | + | chr8.4:5107711-5107730 | None:intergenic | 35.0% | |
| AAAGAATCAGGAACAAGGTT+GGG | + | chr8.4:5107710-5107729 | None:intergenic | 35.0% | |
| AAGACCTTTGTCTGAAGAAA+CGG | + | chr8.4:5104470-5104489 | None:intergenic | 35.0% | |
| AATATGAACGTCACTCTAAC+TGG | - | chr8.4:5105180-5105199 | MS.gene57960:intron | 35.0% | |
| ACACAAAAGAATCAGGAACA+AGG | + | chr8.4:5107715-5107734 | None:intergenic | 35.0% | |
| ACCACCACATTATATTCAGT+CGG | + | chr8.4:5105225-5105244 | None:intergenic | 35.0% | |
| ACTGATGCAATTATACAGGA+TGG | + | chr8.4:5108108-5108127 | None:intergenic | 35.0% | |
| AGAGATCAATCTTCTATTGG+AGG | - | chr8.4:5103721-5103740 | MS.gene57960:intron | 35.0% | |
| AGAGCTTCCTAATAACCAAA+AGG | + | chr8.4:5106573-5106592 | None:intergenic | 35.0% | |
| AGTATACGACAAAGTTTGTC+AGG | + | chr8.4:5106019-5106038 | None:intergenic | 35.0% | |
| ATGAATAGGAATTGTCCACA+CGG | - | chr8.4:5104336-5104355 | MS.gene57960:intron | 35.0% | |
| ATTACCGTTTCTTCAGACAA+AGG | - | chr8.4:5104463-5104482 | MS.gene57960:intron | 35.0% | |
| CAAGCCCTCTCATAATTAAA+TGG | + | chr8.4:5107425-5107444 | None:intergenic | 35.0% | |
| CACAATTGTCTGCAATTTCA+AGG | - | chr8.4:5104642-5104661 | MS.gene57960:intron | 35.0% | |
| CATCAAAAATCAAGGGTGAA+GGG | + | chr8.4:5104319-5104338 | None:intergenic | 35.0% | |
| CATGTAGATTGTTGAAAGAG+AGG | - | chr8.4:5105867-5105886 | MS.gene57960:CDS | 35.0% | |
| CCTATAGTAGCAAATAGGTT+TGG | + | chr8.4:5104817-5104836 | None:intergenic | 35.0% | |
| CGTTCTATTTCCACTCAAAT+TGG | - | chr8.4:5103748-5103767 | MS.gene57960:intron | 35.0% | |
| CGTTGTACAATTTCTACCAA+CGG | - | chr8.4:5105623-5105642 | MS.gene57960:intron | 35.0% | |
| CTAACCTGAGTATAATTCAG+AGG | + | chr8.4:5104949-5104968 | None:intergenic | 35.0% | |
| CTCACATATAAGCTGTAAAG+TGG | - | chr8.4:5107064-5107083 | MS.gene57960:intron | 35.0% | |
| CTTGAAATTGCAGACAATTG+TGG | + | chr8.4:5104644-5104663 | None:intergenic | 35.0% | |
| GAAGAAAAGAAACACATCAC+TGG | - | chr8.4:5107479-5107498 | MS.gene57960:intron | 35.0% | |
| GAATCCTCTGAATTATACTC+AGG | - | chr8.4:5104942-5104961 | MS.gene57960:intron | 35.0% | |
| GAATGTGTGTCTAGTATTGT+TGG | + | chr8.4:5104271-5104290 | None:intergenic | 35.0% | |
| GACTGAAAACAAAGACTGAA+TGG | - | chr8.4:5104124-5104143 | MS.gene57960:intron | 35.0% | |
| GGAATTATTTCCAAATAGCC+AGG | + | chr8.4:5106297-5106316 | None:intergenic | 35.0% | |
| GGACATACCATAACATCAAA+AGG | - | chr8.4:5107669-5107688 | MS.gene57960:intron | 35.0% | |
| TAAACACCTCTTATACTGCA+GGG | - | chr8.4:5107502-5107521 | MS.gene57960:intron | 35.0% | |
| TATGAACTCTGAATGGAATG+CGG | + | chr8.4:5107040-5107059 | None:intergenic | 35.0% | |
| TATTGTCAAGTTTCGACGTT+TGG | - | chr8.4:5105743-5105762 | MS.gene57960:intron | 35.0% | |
| TATTTCCAAATAGCCAGGTA+GGG | + | chr8.4:5106292-5106311 | None:intergenic | 35.0% | |
| TCATCAAAAATCAAGGGTGA+AGG | + | chr8.4:5104320-5104339 | None:intergenic | 35.0% | |
| TGGATTCGTATGAGATTGAA+GGG | - | chr8.4:5105917-5105936 | MS.gene57960:intron | 35.0% | |
| TTACATCACACCATTGAAAC+AGG | + | chr8.4:5105838-5105857 | None:intergenic | 35.0% | |
| TTATTTCCAAATAGCCAGGT+AGG | + | chr8.4:5106293-5106312 | None:intergenic | 35.0% | |
| TTGAGAACTTTGACGTTTGA+AGG | - | chr8.4:5107834-5107853 | MS.gene57960:CDS | 35.0% | |
| TTGATTGTAACCACACATGT+CGG | - | chr8.4:5104220-5104239 | MS.gene57960:intron | 35.0% | |
| TTGTTGTCTGTGTATTGTGA+TGG | - | chr8.4:5104565-5104584 | MS.gene57960:intron | 35.0% | |
| TTGTTTGTGCAGTGAGAAAT+CGG | - | chr8.4:5103866-5103885 | MS.gene57960:intron | 35.0% | |
| ! | ACACATTCAATCAGAAGTGT+GGG | - | chr8.4:5104283-5104302 | MS.gene57960:intron | 35.0% |
| ! | AGACTAGTCAGTGAAATCAT+AGG | + | chr8.4:5108150-5108169 | None:intergenic | 35.0% |
| ! | ATGTTTTATACCAACGTACC+CGG | - | chr8.4:5106840-5106859 | MS.gene57960:CDS | 35.0% |
| ! | CCAAACCTATTTGCTACTAT+AGG | - | chr8.4:5104814-5104833 | MS.gene57960:intron | 35.0% |
| ! | CGTTGGTAGAAATTGTACAA+CGG | + | chr8.4:5105625-5105644 | None:intergenic | 35.0% |
| ! | CTTAGTTATTTCGTCGTAGT+TGG | - | chr8.4:5106676-5106695 | MS.gene57960:intron | 35.0% |
| ! | GCTTAATTTGATCCCTGTTA+TGG | + | chr8.4:5106226-5106245 | None:intergenic | 35.0% |
| ! | TATAAAATGCTATCTGGGAC+CGG | - | chr8.4:5106192-5106211 | MS.gene57960:CDS | 35.0% |
| ! | TGATGACATTCTGAAAAACG+TGG | - | chr8.4:5105560-5105579 | MS.gene57960:intron | 35.0% |
| !! | AAACTGCTCTAGAATGTTCT+TGG | + | chr8.4:5106424-5106443 | None:intergenic | 35.0% |
| !! | CAAAGAGGTTTTAATGTCAC+TGG | + | chr8.4:5105275-5105294 | None:intergenic | 35.0% |
| !! | GTTGTGACCTTTTGGTTATT+AGG | - | chr8.4:5106563-5106582 | MS.gene57960:intron | 35.0% |
| !! | TAATAGATGAAAGTACCTCG+GGG | + | chr8.4:5105665-5105684 | None:intergenic | 35.0% |
| !! | TGAGATTCTGGTAATGGTAA+TGG | - | chr8.4:5104789-5104808 | MS.gene57960:intron | 35.0% |
| !!! | CATGATTTGTTGTGACCTTT+TGG | - | chr8.4:5106555-5106574 | MS.gene57960:intron | 35.0% |
| !!! | GTATTTTCAGGTTTCTGTCT+TGG | - | chr8.4:5105536-5105555 | MS.gene57960:intron | 35.0% |
| AAATTTGCCGTATTACGCAC+CGG | - | chr8.4:5106877-5106896 | MS.gene57960:CDS | 40.0% | |
| AAGTGATGCAATTGTGGATG+TGG | + | chr8.4:5104613-5104632 | None:intergenic | 40.0% | |
| AGTTAGAGACGGGAAATTAG+AGG | - | chr8.4:5107178-5107197 | MS.gene57960:intron | 40.0% | |
| ATAGGAAGCAGAAAGTTGTG+TGG | + | chr8.4:5106332-5106351 | None:intergenic | 40.0% | |
| ATTTCCAAATAGCCAGGTAG+GGG | + | chr8.4:5106291-5106310 | None:intergenic | 40.0% | |
| CACACATTCAATCAGAAGTG+TGG | - | chr8.4:5104282-5104301 | MS.gene57960:intron | 40.0% | |
| CAGGTCCTATAGTAGCAAAT+AGG | + | chr8.4:5104822-5104841 | None:intergenic | 40.0% | |
| CTAGCTATGATGCATAGGTA+CGG | + | chr8.4:5106930-5106949 | None:intergenic | 40.0% | |
| CTGAAAATTCACGTGGTTTG+TGG | - | chr8.4:5103974-5103993 | MS.gene57960:intron | 40.0% | |
| CTGGATTCGTATGAGATTGA+AGG | - | chr8.4:5105916-5105935 | MS.gene57960:intron | 40.0% | |
| CTTCTCTTGATGCTTTCTCT+CGG | + | chr8.4:5106979-5106998 | None:intergenic | 40.0% | |
| GATAGTATAGTTGACACCGT+TGG | + | chr8.4:5105642-5105661 | None:intergenic | 40.0% | |
| GATTCGTATGAGATTGAAGG+GGG | - | chr8.4:5105919-5105938 | MS.gene57960:intron | 40.0% | |
| GGATTCGTATGAGATTGAAG+GGG | - | chr8.4:5105918-5105937 | MS.gene57960:intron | 40.0% | |
| GTAAACACCTCTTATACTGC+AGG | - | chr8.4:5107501-5107520 | MS.gene57960:intron | 40.0% | |
| GTATGTCATATTGGGAGAGA+AGG | - | chr8.4:5104855-5104874 | MS.gene57960:intron | 40.0% | |
| GTCTGACCCTCACTTATAAT+AGG | - | chr8.4:5108013-5108032 | MS.gene57960:intron | 40.0% | |
| TACGCAAGAAAACTGGAACT+CGG | + | chr8.4:5105977-5105996 | None:intergenic | 40.0% | |
| TAGCTATGATGCATAGGTAC+GGG | + | chr8.4:5106929-5106948 | None:intergenic | 40.0% | |
| TATGCATCATAGCTAGGAAG+CGG | - | chr8.4:5106934-5106953 | MS.gene57960:CDS | 40.0% | |
| TCCGACTGAATATAATGTGG+TGG | - | chr8.4:5105221-5105240 | MS.gene57960:intron | 40.0% | |
| TCTTCAGACAAAGGTCTTTG+TGG | - | chr8.4:5104472-5104491 | MS.gene57960:intron | 40.0% | |
| TTAGTCTAATTGCCGTACGT+AGG | - | chr8.4:5106069-5106088 | MS.gene57960:intron | 40.0% | |
| TTCAAGGACATGTTACCTAG+TGG | - | chr8.4:5106500-5106519 | MS.gene57960:intron | 40.0% | |
| TTGGTGCAGCAAAAACGTAA+GGG | - | chr8.4:5106695-5106714 | MS.gene57960:intron | 40.0% | |
| TTGTACGTACGCAAGAAAAC+TGG | + | chr8.4:5105984-5106003 | None:intergenic | 40.0% | |
| TTTCCTCACAAAAGCTGAAC+AGG | + | chr8.4:5105342-5105361 | None:intergenic | 40.0% | |
| ! | AAACCTGTTCAGCTTTTGTG+AGG | - | chr8.4:5105336-5105355 | MS.gene57960:intron | 40.0% |
| ! | ACCAGAATTCAACTTGCTCA+AGG | + | chr8.4:5104533-5104552 | None:intergenic | 40.0% |
| ! | ACTTTCTCTCAGAGCATTCA+AGG | - | chr8.4:5106484-5106503 | MS.gene57960:intron | 40.0% |
| ! | AGATGGGCCTTTTGATGTTA+TGG | + | chr8.4:5107679-5107698 | None:intergenic | 40.0% |
| ! | ATAAAATGCTATCTGGGACC+GGG | - | chr8.4:5106193-5106212 | MS.gene57960:CDS | 40.0% |
| ! | ATGCTTTCTTTGGCAGCTTT+TGG | + | chr8.4:5105389-5105408 | None:intergenic | 40.0% |
| ! | CTATGTAGTTGGGAGTGTAA+TGG | + | chr8.4:5107641-5107660 | None:intergenic | 40.0% |
| ! | TGCTTTCTTTGGCAGCTTTT+GGG | + | chr8.4:5105388-5105407 | None:intergenic | 40.0% |
| ! | TTTCGTGTCATTGCTCATTG+TGG | - | chr8.4:5104394-5104413 | MS.gene57960:intron | 40.0% |
| !! | AATAGATGAAAGTACCTCGG+GGG | + | chr8.4:5105664-5105683 | None:intergenic | 40.0% |
| !! | AGGTTTTAATGTCACTGGGT+TGG | + | chr8.4:5105270-5105289 | None:intergenic | 40.0% |
| !! | ATTAGGAAGCTCTGAAGCAT+GGG | - | chr8.4:5106580-5106599 | MS.gene57960:intron | 40.0% |
| !! | GAGAGAAAGCATCAAGAGAA+GGG | - | chr8.4:5106978-5106997 | MS.gene57960:intron | 40.0% |
| !! | GGTTTTAATGTCACTGGGTT+GGG | + | chr8.4:5105269-5105288 | None:intergenic | 40.0% |
| !! | GTGCTTTTTGCCTGTTTCAA+TGG | - | chr8.4:5105825-5105844 | MS.gene57960:CDS | 40.0% |
| !! | TATTAGGAAGCTCTGAAGCA+TGG | - | chr8.4:5106579-5106598 | MS.gene57960:intron | 40.0% |
| !! | TGATTCTGAAGTCCTACGTA+CGG | + | chr8.4:5106084-5106103 | None:intergenic | 40.0% |
| !!! | AGGGGTTTTGTTCTGTAGTT+TGG | - | chr8.4:5107227-5107246 | MS.gene57960:intron | 40.0% |
| !!! | GGGGTTTTGTTCTGTAGTTT+GGG | - | chr8.4:5107228-5107247 | MS.gene57960:intron | 40.0% |
| AAGCATGGGTACTCCAAACA+TGG | - | chr8.4:5106594-5106613 | MS.gene57960:intron | 45.0% | |
| ACAAATTAGTACGCACCGTG+TGG | + | chr8.4:5104354-5104373 | None:intergenic | 45.0% | |
| AGAGTGAGAGAGAACGAACA+AGG | + | chr8.4:5103638-5103657 | None:intergenic | 45.0% | |
| ATATTTCATGTCAGGGGACC+TGG | + | chr8.4:5105726-5105745 | None:intergenic | 45.0% | |
| ATGATGCATAGGTACGGGTA+CGG | + | chr8.4:5106924-5106943 | None:intergenic | 45.0% | |
| ATGTGGTGGTTGCTTAATGC+TGG | - | chr8.4:5105235-5105254 | MS.gene57960:intron | 45.0% | |
| CACGTCTGTCAAGATAAGCA+GGG | - | chr8.4:5104507-5104526 | MS.gene57960:intron | 45.0% | |
| CATATTGGGAGAGAAGGCTA+AGG | - | chr8.4:5104861-5104880 | MS.gene57960:intron | 45.0% | |
| CGTACCTATGCATCATAGCT+AGG | - | chr8.4:5106928-5106947 | MS.gene57960:CDS | 45.0% | |
| CTTGACAGGTCACTACTTTG+TGG | + | chr8.4:5107551-5107570 | None:intergenic | 45.0% | |
| GAAGCAGAAAGTTGTGTGGA+GGG | + | chr8.4:5106328-5106347 | None:intergenic | 45.0% | |
| GAGTGAGAGAGAACGAACAA+GGG | + | chr8.4:5103637-5103656 | None:intergenic | 45.0% | |
| GCTTCCTAGCTATGATGCAT+AGG | + | chr8.4:5106935-5106954 | None:intergenic | 45.0% | |
| GTCAGTGCTTCATTGGTGAA+GGG | + | chr8.4:5104151-5104170 | None:intergenic | 45.0% | |
| GTTGGTGCAGCAAAAACGTA+AGG | - | chr8.4:5106694-5106713 | MS.gene57960:intron | 45.0% | |
| GTTGTGTGGAGGGATAGATA+TGG | + | chr8.4:5106318-5106337 | None:intergenic | 45.0% | |
| TATTTCATGTCAGGGGACCT+GGG | + | chr8.4:5105725-5105744 | None:intergenic | 45.0% | |
| TCACAACCCTGCAGTATAAG+AGG | + | chr8.4:5107511-5107530 | None:intergenic | 45.0% | |
| TCAGACAAAGGTCTTTGTGG+TGG | - | chr8.4:5104475-5104494 | MS.gene57960:intron | 45.0% | |
| TGGTTGCTTAATGCTGGCAA+GGG | - | chr8.4:5105241-5105260 | MS.gene57960:intron | 45.0% | |
| TGTCAGTGCTTCATTGGTGA+AGG | + | chr8.4:5104152-5104171 | None:intergenic | 45.0% | |
| ! | AACTACGTGCTGTTCAAACC+AGG | - | chr8.4:5103950-5103969 | MS.gene57960:intron | 45.0% |
| ! | ACTACGTGCTGTTCAAACCA+GGG | - | chr8.4:5103951-5103970 | MS.gene57960:intron | 45.0% |
| ! | AGAGGTGTACTTGGACTCTT+GGG | + | chr8.4:5107611-5107630 | None:intergenic | 45.0% |
| ! | CTCCAAACATGGAGAAGTAC+CGG | - | chr8.4:5106605-5106624 | MS.gene57960:intron | 45.0% |
| ! | GCCTTGAGCAAGTTGAATTC+TGG | - | chr8.4:5104529-5104548 | MS.gene57960:intron | 45.0% |
| ! | TAAAATGCTATCTGGGACCG+GGG | - | chr8.4:5106194-5106213 | MS.gene57960:CDS | 45.0% |
| ! | TGGTTTGTGGCAGCCATTTA+CGG | - | chr8.4:5103987-5104006 | MS.gene57960:intron | 45.0% |
| ! | TGTAGTTGGGAGTGTAATGG+AGG | + | chr8.4:5107638-5107657 | None:intergenic | 45.0% |
| ! | TTGAGGCATTTGAGAGACCT+GGG | + | chr8.4:5107262-5107281 | None:intergenic | 45.0% |
| !! | CGAGAGAAAGCATCAAGAGA+AGG | - | chr8.4:5106977-5106996 | MS.gene57960:intron | 45.0% |
| !! | TCCAAACATGGAGAAGTACC+GGG | - | chr8.4:5106606-5106625 | MS.gene57960:intron | 45.0% |
| !! | GAATAAAAAAATAAAAAATT+AGG | + | chr8.4:5103797-5103816 | None:intergenic | 5.0% |
| !!! | TTGTTTATATAAATTTTATA+AGG | - | chr8.4:5107389-5107408 | MS.gene57960:intron | 5.0% |
| AAATGAAGGTCCGGGTACGT+TGG | + | chr8.4:5106853-5106872 | None:intergenic | 50.0% | |
| AAGGTTGGGCGTAGACAAGA+TGG | + | chr8.4:5107696-5107715 | None:intergenic | 50.0% | |
| ACCAGGGCTGAAAATTCACG+TGG | - | chr8.4:5103967-5103986 | MS.gene57960:intron | 50.0% | |
| ACCCGGTACTTCTCCATGTT+TGG | + | chr8.4:5106610-5106629 | None:intergenic | 50.0% | |
| ACCGGGGTGAAATCCATAAC+AGG | - | chr8.4:5106210-5106229 | MS.gene57960:CDS | 50.0% | |
| ACGAACAAGGGAGAGATGAG+AGG | + | chr8.4:5103625-5103644 | None:intergenic | 50.0% | |
| ACGTGGAGTATGATGCACTG+AGG | - | chr8.4:5105577-5105596 | MS.gene57960:intron | 50.0% | |
| AGGGAGAGATGAGAGGAGAT+CGG | + | chr8.4:5103618-5103637 | None:intergenic | 50.0% | |
| AGGTTGGGCGTAGACAAGAT+GGG | + | chr8.4:5107695-5107714 | None:intergenic | 50.0% | |
| ATTCCTGCTAGAGCTGTCCA+TGG | + | chr8.4:5107974-5107993 | None:intergenic | 50.0% | |
| CAGCCATTTACGGCTCTTCT+CGG | - | chr8.4:5103997-5104016 | MS.gene57960:intron | 50.0% | |
| CATTTGAGAGACCTGGGATC+TGG | + | chr8.4:5107256-5107275 | None:intergenic | 50.0% | |
| CCACGTCTGTCAAGATAAGC+AGG | - | chr8.4:5104506-5104525 | MS.gene57960:intron | 50.0% | |
| CCCTGTTATGGATTTCACCC+CGG | + | chr8.4:5106214-5106233 | None:intergenic | 50.0% | |
| CCGGGGTGAAATCCATAACA+GGG | - | chr8.4:5106211-5106230 | MS.gene57960:CDS | 50.0% | |
| CCTGCTTATCTTGACAGACG+TGG | + | chr8.4:5104509-5104528 | None:intergenic | 50.0% | |
| CGTGTGTGTCAGTGCTTCAT+TGG | + | chr8.4:5104158-5104177 | None:intergenic | 50.0% | |
| CTAGGAAGCGGTCAAAGCAT+AGG | - | chr8.4:5106946-5106965 | MS.gene57960:intron | 50.0% | |
| GAAGCGGTCAAAGCATAGGA+AGG | - | chr8.4:5106950-5106969 | MS.gene57960:intron | 50.0% | |
| GAGGTGTACTTGGACTCTTG+GGG | + | chr8.4:5107610-5107629 | None:intergenic | 50.0% | |
| GGAAGCAGAAAGTTGTGTGG+AGG | + | chr8.4:5106329-5106348 | None:intergenic | 50.0% | |
| GGTCATGTTCAATGCGGTGT+TGG | - | chr8.4:5107912-5107931 | MS.gene57960:intron | 50.0% | |
| GGTGGTTGAGAAGACATGAG+AGG | + | chr8.4:5103580-5103599 | None:intergenic | 50.0% | |
| GTCAACTATACTATCCCCCG+AGG | - | chr8.4:5105647-5105666 | MS.gene57960:intron | 50.0% | |
| GTGGTTGCTTAATGCTGGCA+AGG | - | chr8.4:5105240-5105259 | MS.gene57960:intron | 50.0% | |
| GTTGAAAGAGAGGCTGAAGC+TGG | - | chr8.4:5105877-5105896 | MS.gene57960:CDS | 50.0% | |
| TCACCGAGAAGAGCCGTAAA+TGG | + | chr8.4:5104003-5104022 | None:intergenic | 50.0% | |
| TGTACTTGGACTCTTGGGGA+AGG | + | chr8.4:5107606-5107625 | None:intergenic | 50.0% | |
| ! | ACAGCTCTAGCAGGAATGCT+GGG | - | chr8.4:5107977-5107996 | MS.gene57960:intron | 50.0% |
| ! | ACCACGTGAATTTTCAGCCC+TGG | + | chr8.4:5103971-5103990 | None:intergenic | 50.0% |
| ! | AGTTGGGAGTGTAATGGAGG+AGG | + | chr8.4:5107635-5107654 | None:intergenic | 50.0% |
| ! | CAGAGGTGTACTTGGACTCT+TGG | + | chr8.4:5107612-5107631 | None:intergenic | 50.0% |
| ! | CTTGAGGCATTTGAGAGACC+TGG | + | chr8.4:5107263-5107282 | None:intergenic | 50.0% |
| !! | ATGGGTACCGGTGCGTAATA+CGG | + | chr8.4:5106887-5106906 | None:intergenic | 50.0% |
| !! | GATCGGAGAGTGGTGTTGAT+TGG | + | chr8.4:5103601-5103620 | None:intergenic | 50.0% |
| ACGAGTACCATACGCGTACC+CGG | + | chr8.4:5106627-5106646 | None:intergenic | 55.0% | |
| AGGAGCAAGGATGTCTGCCA+TGG | - | chr8.4:5107954-5107973 | MS.gene57960:intron | 55.0% | |
| ATAGGTACGGGTACGGTACC+CGG | + | chr8.4:5106917-5106936 | None:intergenic | 55.0% | |
| CAAATAGCCAGGTAGGGGCT+AGG | + | chr8.4:5106286-5106305 | None:intergenic | 55.0% | |
| CTAGCCCCTACCTGGCTATT+TGG | - | chr8.4:5106284-5106303 | MS.gene57960:intron | 55.0% | |
| CTTGGACTCTTGGGGAAGGA+CGG | + | chr8.4:5107602-5107621 | None:intergenic | 55.0% | |
| GAAAGAGAGGCTGAAGCTGG+AGG | - | chr8.4:5105880-5105899 | MS.gene57960:CDS | 55.0% | |
| GAGAATGCCTGCAGTGAGCA+AGG | - | chr8.4:5107934-5107953 | MS.gene57960:intron | 55.0% | |
| GATGAGAGGAGATCGGAGAG+TGG | + | chr8.4:5103611-5103630 | None:intergenic | 55.0% | |
| GCGTTCGATACCGACATGTG+TGG | + | chr8.4:5104233-5104252 | None:intergenic | 55.0% | |
| GCTGAAGCTGGAGGAAGTCT+CGG | - | chr8.4:5105889-5105908 | MS.gene57960:CDS | 55.0% | |
| GTATCGAACGCTGACGAGTG+AGG | - | chr8.4:5104242-5104261 | MS.gene57960:intron | 55.0% | |
| TAGTTTGGGAGCCAGATCCC+AGG | - | chr8.4:5107242-5107261 | MS.gene57960:CDS | 55.0% | |
| TGGAGGAAGTCTCGGTGAAC+TGG | - | chr8.4:5105897-5105916 | MS.gene57960:CDS | 55.0% | |
| TTGGACTCTTGGGGAAGGAC+GGG | + | chr8.4:5107601-5107620 | None:intergenic | 55.0% | |
| ! | CAGCTCTAGCAGGAATGCTG+GGG | - | chr8.4:5107978-5107997 | MS.gene57960:intron | 55.0% |
| ! | GACAGCTCTAGCAGGAATGC+TGG | - | chr8.4:5107976-5107995 | MS.gene57960:intron | 55.0% |
| ! | GAGTGTAATGGAGGAGGCAG+AGG | + | chr8.4:5107629-5107648 | None:intergenic | 55.0% |
| ! | TGGGGAAGGACGGGGTTTTT+GGG | + | chr8.4:5107592-5107611 | None:intergenic | 55.0% |
| ! | TTGGGGAAGGACGGGGTTTT+TGG | + | chr8.4:5107593-5107612 | None:intergenic | 55.0% |
| !! | AGAAGTACCGGGTACGCGTA+TGG | - | chr8.4:5106617-5106636 | MS.gene57960:intron | 55.0% |
| !! | CGGAGAGTGGTGTTGATTGG+TGG | + | chr8.4:5103598-5103617 | None:intergenic | 55.0% |
| !! | GAAGGACGGGGTTTTTGGGA+AGG | + | chr8.4:5107588-5107607 | None:intergenic | 55.0% |
| !! | TCTGGAGCATCAGCACTGAC+AGG | - | chr8.4:5108233-5108252 | MS.gene57960:CDS | 55.0% |
| ACCGGTACCCATACCCGTAC+CGG | - | chr8.4:5106895-5106914 | MS.gene57960:CDS | 60.0% | |
| ACGGTACCCGGTACGGGTAT+GGG | + | chr8.4:5106905-5106924 | None:intergenic | 60.0% | |
| CCAAACGCTTCCCTTCGCGT+CGG | + | chr8.4:5103555-5103574 | None:intergenic | 60.0% | |
| CCAGGTAGGGGCTAGGTTAG+AGG | + | chr8.4:5106279-5106298 | None:intergenic | 60.0% | |
| CCTCTAACCTAGCCCCTACC+TGG | - | chr8.4:5106276-5106295 | MS.gene57960:intron | 60.0% | |
| CCTGCAGTGAGCAAGGAGCA+AGG | - | chr8.4:5107941-5107960 | MS.gene57960:intron | 60.0% | |
| CCTTGCTCCTTGCTCACTGC+AGG | + | chr8.4:5107944-5107963 | None:intergenic | 60.0% | |
| TACGGGTACGGTACCCGGTA+CGG | + | chr8.4:5106912-5106931 | None:intergenic | 60.0% | |
| TACGGTACCCGGTACGGGTA+TGG | + | chr8.4:5106906-5106925 | None:intergenic | 60.0% | |
| TGGACTCTTGGGGAAGGACG+GGG | + | chr8.4:5107600-5107619 | None:intergenic | 60.0% | |
| ! | CTGCCATGGACAGCTCTAGC+AGG | - | chr8.4:5107968-5107987 | MS.gene57960:intron | 60.0% |
| ! | GGAGGAGGCAGAGGTGTACT+TGG | + | chr8.4:5107620-5107639 | None:intergenic | 60.0% |
| ACGGGTACGGTACCCGGTAC+GGG | + | chr8.4:5106911-5106930 | None:intergenic | 65.0% | |
| CCCGGTACGGGTATGGGTAC+CGG | + | chr8.4:5106899-5106918 | None:intergenic | 65.0% | |
| CCGGTACCCATACCCGTACC+GGG | - | chr8.4:5106896-5106915 | MS.gene57960:CDS | 65.0% | |
| CTGCTGCACTCCGACGCGAA+GGG | - | chr8.4:5103542-5103561 | MS.gene57960:CDS | 65.0% | |
| !! | CCGACGCGAAGGGAAGCGTT+TGG | - | chr8.4:5103552-5103571 | MS.gene57960:CDS | 65.0% |
| GCTGCTGCACTCCGACGCGA+AGG | - | chr8.4:5103541-5103560 | MS.gene57960:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 5103532 | 5108259 | 5103532 | ID=MS.gene57960 |
| chr8.4 | mRNA | 5103532 | 5108259 | 5103532 | ID=MS.gene57960.t1;Parent=MS.gene57960 |
| chr8.4 | exon | 5108207 | 5108259 | 5108207 | ID=MS.gene57960.t1.exon1;Parent=MS.gene57960.t1 |
| chr8.4 | CDS | 5108207 | 5108259 | 5108207 | ID=cds.MS.gene57960.t1;Parent=MS.gene57960.t1 |
| chr8.4 | exon | 5108022 | 5108068 | 5108022 | ID=MS.gene57960.t1.exon2;Parent=MS.gene57960.t1 |
| chr8.4 | CDS | 5108022 | 5108068 | 5108022 | ID=cds.MS.gene57960.t1;Parent=MS.gene57960.t1 |
| chr8.4 | exon | 5107761 | 5107913 | 5107761 | ID=MS.gene57960.t1.exon3;Parent=MS.gene57960.t1 |
| chr8.4 | CDS | 5107761 | 5107913 | 5107761 | ID=cds.MS.gene57960.t1;Parent=MS.gene57960.t1 |
| chr8.4 | exon | 5107241 | 5107354 | 5107241 | ID=MS.gene57960.t1.exon4;Parent=MS.gene57960.t1 |
| chr8.4 | CDS | 5107241 | 5107354 | 5107241 | ID=cds.MS.gene57960.t1;Parent=MS.gene57960.t1 |
| chr8.4 | exon | 5106828 | 5106955 | 5106828 | ID=MS.gene57960.t1.exon5;Parent=MS.gene57960.t1 |
| chr8.4 | CDS | 5106828 | 5106955 | 5106828 | ID=cds.MS.gene57960.t1;Parent=MS.gene57960.t1 |
| chr8.4 | exon | 5106123 | 5106245 | 5106123 | ID=MS.gene57960.t1.exon6;Parent=MS.gene57960.t1 |
| chr8.4 | CDS | 5106123 | 5106245 | 5106123 | ID=cds.MS.gene57960.t1;Parent=MS.gene57960.t1 |
| chr8.4 | exon | 5105798 | 5105917 | 5105798 | ID=MS.gene57960.t1.exon7;Parent=MS.gene57960.t1 |
| chr8.4 | CDS | 5105798 | 5105917 | 5105798 | ID=cds.MS.gene57960.t1;Parent=MS.gene57960.t1 |
| chr8.4 | exon | 5103757 | 5103878 | 5103757 | ID=MS.gene57960.t1.exon8;Parent=MS.gene57960.t1 |
| chr8.4 | CDS | 5103757 | 5103878 | 5103757 | ID=cds.MS.gene57960.t1;Parent=MS.gene57960.t1 |
| chr8.4 | exon | 5103532 | 5103601 | 5103532 | ID=MS.gene57960.t1.exon9;Parent=MS.gene57960.t1 |
| chr8.4 | CDS | 5103532 | 5103601 | 5103532 | ID=cds.MS.gene57960.t1;Parent=MS.gene57960.t1 |
| Gene Sequence |
| Protein sequence |
