AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene71744

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene71744.t1 MTR_1g108770 99.284 559 4 0 1 559 1 559 0.0 1132
MS.gene71744.t1 MTR_1g108765 93.023 559 36 3 1 559 1 556 0.0 1008
MS.gene71744.t1 MTR_7g021780 69.703 472 136 3 85 550 17 487 0.0 629
MS.gene71744.t1 MTR_4g451275 69.474 475 138 3 85 553 17 490 0.0 629
MS.gene71744.t1 MTR_3g035730 68.842 475 141 3 85 553 17 490 0.0 622
MS.gene71744.t1 MTR_0002s0650 68.817 465 136 4 89 547 21 482 0.0 615
MS.gene71744.t1 MTR_7g033765 68.904 447 132 3 85 525 17 462 0.0 585
MS.gene71744.t1 MTR_7g033755 61.247 449 106 4 107 550 1 386 4.24e-178 512
MS.gene71744.t1 MTR_2g066870 60.152 394 143 5 162 552 29 411 2.75e-158 458
MS.gene71744.t1 MTR_1829s0010 76.577 222 52 0 319 540 1 222 3.76e-119 355
MS.gene71744.t1 MTR_7g117920 65.248 282 91 3 85 360 17 297 9.77e-109 328
MS.gene71744.t1 MTR_6g055020 63.774 265 89 3 85 343 17 280 2.66e-97 297
MS.gene71744.t1 MTR_2g066860 57.317 164 54 5 1 162 2 151 4.75e-46 160
MS.gene71744.t1 MTR_1g076100 70.000 80 24 0 376 455 5 84 6.56e-32 118
MS.gene71744.t1 MTR_4g010980 47.015 134 65 2 86 213 15 148 2.10e-28 110
MS.gene71744.t1 MTR_1g112870 28.642 405 251 12 118 496 52 444 1.02e-27 117
MS.gene71744.t1 MTR_7g081010 28.713 404 251 13 118 496 51 442 1.21e-27 116
MS.gene71744.t1 MTR_4g005410 28.313 332 212 9 183 496 203 526 4.17e-26 113
MS.gene71744.t1 MTR_5g090750 76.786 56 13 0 459 514 21 76 8.61e-23 92.8
MS.gene71744.t1 MTR_0002s0550 24.104 502 310 17 88 556 29 492 5.88e-19 90.5
MS.gene71744.t1 MTR_0212s0040 25.253 297 201 4 153 437 90 377 2.49e-18 89.4
MS.gene71744.t1 MTR_2g009560 45.833 72 36 1 480 551 3 71 9.66e-14 67.4
MS.gene71744.t1 MTR_3g099550 73.333 45 12 0 101 145 10 54 1.06e-13 67.8
MS.gene71744.t1 MTR_3g065340 59.259 54 21 1 88 141 55 107 2.75e-13 67.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene71744.t1 AT5G08680 84.351 524 75 2 38 559 41 559 0.0 902
MS.gene71744.t1 AT5G08690 84.121 529 77 2 33 559 33 556 0.0 890
MS.gene71744.t1 AT5G08670 84.181 531 76 3 32 559 31 556 0.0 890
MS.gene71744.t1 ATCG00480 68.267 479 145 3 85 557 17 494 0.0 631
MS.gene71744.t1 AT1G20260 28.642 405 251 12 118 496 50 442 1.93e-28 119
MS.gene71744.t1 AT1G76030 28.960 404 250 12 118 496 50 441 4.70e-28 117
MS.gene71744.t1 AT4G38510 28.218 404 253 12 118 496 51 442 1.11e-27 117
MS.gene71744.t1 AT4G38510 28.218 404 253 12 118 496 51 442 1.11e-27 117
MS.gene71744.t1 AT4G38510 28.218 404 253 12 118 496 51 442 1.11e-27 117
MS.gene71744.t1 AT4G38510 28.218 404 253 12 118 496 51 442 1.11e-27 117
MS.gene71744.t1 AT4G38510 28.218 404 253 12 118 496 58 449 1.25e-27 116
MS.gene71744.t1 AT1G78900 27.635 351 223 10 211 544 229 565 2.72e-26 114
MS.gene71744.t1 AT1G78900 27.635 351 223 10 211 544 229 565 2.72e-26 114
MS.gene71744.t1 ATMG01190 25.667 300 202 4 150 437 87 377 2.25e-19 92.0
MS.gene71744.t1 AT2G07698 25.589 297 200 4 153 437 360 647 9.75e-19 90.5
MS.gene71744.t1 ATCG00120 24.651 430 271 14 101 513 54 447 6.92e-17 84.0

Find 154 sgRNAs with CRISPR-Local

Find 225 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAAGATATCATTGCTATTT+TGG 0.086458 1.1:-77700558 MS.gene71744:CDS
TATGCTTTCACCACTTATTT+TGG 0.102924 1.1:-77700642 MS.gene71744:CDS
AGCAAATGTGCTCTTGTTTA+TGG 0.159877 1.1:-77701302 MS.gene71744:CDS
CGTGCCCGTGTTGGTCTTAC+TGG 0.164716 1.1:-77701254 MS.gene71744:CDS
TGATTGAGAAGAAGAGTTTC+TGG 0.217928 1.1:+77703352 None:intergenic
GGACGTATCATGAATGTTAT+TGG 0.260657 1.1:-77702057 MS.gene71744:CDS
ATCCAATCTTTCCTCCTCTT+TGG 0.273825 1.1:+77701692 None:intergenic
AGCTACCACCTTTGCTCACT+TGG 0.316716 1.1:-77700854 MS.gene71744:CDS
AAGATTACAGATGAATTTAC+TGG 0.354465 1.1:-77703209 MS.gene71744:CDS
GGAGGAAAGATTGGATTGTT+TGG 0.361136 1.1:-77701685 MS.gene71744:CDS
AGAGGTAATTGAACCCTTCT+TGG 0.378135 1.1:+77700924 None:intergenic
CCAACACGGGCACGAGCACC+AGG 0.380050 1.1:+77701263 None:intergenic
ATTGGATTGTTTGGTGGTGC+TGG 0.384032 1.1:-77701676 MS.gene71744:CDS
TGAGGTGGTGAGGGATGATT+TGG 0.386496 1.1:+77703379 None:intergenic
CTATCCTGCTGTTGATCCAT+TGG 0.388341 1.1:-77700678 MS.gene71744:CDS
ATCTTTCCTCCTCTTTGGTA+TGG 0.392214 1.1:+77701697 None:intergenic
CCAACATTGTCTACTGATCT+TGG 0.396356 1.1:-77700973 MS.gene71744:CDS
GAACAAGTATTTACACTGAT+AGG 0.402727 1.1:+77702963 None:intergenic
GTAGGAGCTTCTCTATGAAT+AGG 0.403993 1.1:+77701881 None:intergenic
CTCTTTGAAAGATGGCTTCA+CGG 0.408787 1.1:-77703448 None:intergenic
CCATTCAGGTTCCCGTTGGC+AGG 0.418779 1.1:-77702089 MS.gene71744:intron
CCCGTTGGCAGGTGTACTCT+TGG 0.425281 1.1:-77702078 MS.gene71744:CDS
TGCGATTGGACAGGTTTGTC+AGG 0.431621 1.1:-77703180 MS.gene71744:CDS
TACCAAAGAGGAGGAAAGAT+TGG 0.432147 1.1:-77701694 MS.gene71744:CDS
ACAGATGAATTTACTGGTAA+AGG 0.438215 1.1:-77703203 MS.gene71744:CDS
AGAGAATTGTACTAGTTTCA+AGG 0.440200 1.1:-77700405 MS.gene71744:intron
CTCCTCTTTGGTATGGTGCA+AGG 0.442168 1.1:+77701704 None:intergenic
GCCACGGAAGGAGTTGTTAG+AGG 0.442751 1.1:-77703011 MS.gene71744:CDS
GGACAGGTTTGTCAGGTGAT+TGG 0.443988 1.1:-77703173 MS.gene71744:CDS
GAAGTCTTCACTGGTGCCCC+TGG 0.444882 1.1:-77700446 MS.gene71744:CDS
TATACAAGTCGTTACCCTCT+CGG 0.450847 1.1:+77701454 None:intergenic
GGAGGAGTCTGAGGAGGAGC+GGG 0.453232 1.1:+77703260 None:intergenic
GTTGGAGGTTGCACAACATA+TGG 0.453780 1.1:-77703066 MS.gene71744:CDS
GGTCGCATTCCATCTGCTGT+TGG 0.461688 1.1:-77701003 MS.gene71744:CDS
ACCTCGAGCGCAGTAAGAAT+CGG 0.464761 1.1:+77703113 None:intergenic
TTCTGGATGTTGAGGTGGTG+AGG 0.464926 1.1:+77703369 None:intergenic
AGCGGGAGCTGCAGCAGCCG+CGG 0.467946 1.1:+77703277 None:intergenic
TTGTTTGGTGGTGCTGGTGT+AGG 0.469965 1.1:-77701670 MS.gene71744:CDS
TTCTACCAGATTGGTGTTGG+AGG 0.474155 1.1:-77703081 MS.gene71744:CDS
AACAAGTATTTACACTGATA+GGG 0.474457 1.1:+77702964 None:intergenic
TTCAAGTCGACATATTTGCC+AGG 0.475504 1.1:+77700428 None:intergenic
GTTGCTTGTTCAACAAAAGT+AGG 0.475828 1.1:+77701863 None:intergenic
AAGTGAGCAAAGGTGGTAGC+TGG 0.477958 1.1:+77700856 None:intergenic
GGAGAACCTATCGATCATAA+AGG 0.484786 1.1:-77702036 MS.gene71744:CDS
TCAGAGGTGTCTGCCTTGCT+TGG 0.485682 1.1:-77701024 MS.gene71744:CDS
AATTCTTGTGACCGGTATCA+AGG 0.486500 1.1:-77701831 MS.gene71744:intron
TGCAACCTCCAACACCAATC+TGG 0.487446 1.1:+77703076 None:intergenic
TCTCGATCATTCTACCAGAT+TGG 0.487639 1.1:-77703090 MS.gene71744:CDS
CAGCAGGAACATAGATAGCT+TGG 0.488213 1.1:+77700899 None:intergenic
ATACAAGTCGTTACCCTCTC+GGG 0.496422 1.1:+77701455 None:intergenic
TCTGGATGTTGAGGTGGTGA+GGG 0.499868 1.1:+77703370 None:intergenic
TGGTAAAGGTGCGATTGGAC+AGG 0.502211 1.1:-77703189 MS.gene71744:CDS
CATGTGGCAGAAGTCTTCAC+TGG 0.503014 1.1:-77700455 MS.gene71744:CDS
TTTACTGGTAAAGGTGCGAT+TGG 0.504437 1.1:-77703194 MS.gene71744:CDS
CGCTCCTCCTCAGACTCCTC+CGG 0.504794 1.1:-77703258 MS.gene71744:CDS
CATTAAGCTTGGTGATCAGC+AGG 0.509927 1.1:-77701409 MS.gene71744:intron
TATAGAGAAATGATTGAGAG+TGG 0.511529 1.1:-77701435 MS.gene71744:CDS
GCAAAGGTGGTAGCTGGAGC+AGG 0.511863 1.1:+77700862 None:intergenic
AGAAGAGTTTCTGGATGTTG+AGG 0.512929 1.1:+77703361 None:intergenic
TCATTCTACCAGATTGGTGT+TGG 0.514550 1.1:-77703084 MS.gene71744:CDS
CCAAGAGTACACCTGCCAAC+GGG 0.515968 1.1:+77702078 None:intergenic
CCTGGTGCTCGTGCCCGTGT+TGG 0.516375 1.1:-77701263 MS.gene71744:CDS
TGTAAAATGCTTGTTCTGAA+AGG 0.518148 1.1:+77699856 None:intergenic
GAAGACTTCTGCCACATGGA+AGG 0.519142 1.1:+77700460 None:intergenic
GGTAATTGAACCCTTCTTGG+TGG 0.519165 1.1:+77700927 None:intergenic
TGAACTAATGCAGGGTGTGT+TGG 0.523112 1.1:-77699895 MS.gene71744:intron
GTAATCTTTCCACCACCGTC+AGG 0.524642 1.1:+77703224 None:intergenic
TGCTCATCACCCAAAATAAG+TGG 0.527620 1.1:+77700632 None:intergenic
GGTCACAAGAATTTGTTGTT+CGG 0.528371 1.1:+77701841 None:intergenic
CCGTCAGGAACTTTCTTAGC+CGG 0.528890 1.1:+77703239 None:intergenic
GAGAGTGGAGTCATTAAGCT+TGG 0.530056 1.1:-77701420 MS.gene71744:CDS
AACAATGTCGCAAAGGCTCA+TGG 0.531884 1.1:-77701619 MS.gene71744:intron
AACTATTGCTATGGATGCCA+CGG 0.532047 1.1:-77703027 MS.gene71744:CDS
TCAGGTGATTGGTGCTGTGG+TGG 0.537904 1.1:-77703162 MS.gene71744:CDS
GGATCTGTCAAGTCATCAGC+AGG 0.539160 1.1:+77700883 None:intergenic
AATTCGCCTTTATGATCGAT+AGG 0.542417 1.1:+77702030 None:intergenic
GAATCCAATGGATCAACAGC+AGG 0.543347 1.1:+77700674 None:intergenic
AAGACTTCTGCCACATGGAA+GGG 0.546375 1.1:+77700461 None:intergenic
GCGTATTACAACCACCAAGA+AGG 0.546572 1.1:-77700938 MS.gene71744:CDS
AGGGATGATTTGGATAGAGA+TGG 0.547033 1.1:+77703389 None:intergenic
TTCTTAGCCGGAGGAGTCTG+AGG 0.548263 1.1:+77703251 None:intergenic
AACACGGGCACGAGCACCAG+GGG 0.551252 1.1:+77701265 None:intergenic
AGCCGCGGCTGTAGCATACT+CGG 0.552420 1.1:+77703292 None:intergenic
AAGAAAGTTCCTGACGGTGG+TGG 0.552444 1.1:-77703233 MS.gene71744:CDS
ACTCGGTAACACGGTTAAGA+AGG 0.555449 1.1:+77703309 None:intergenic
CGGAGGAGTCTGAGGAGGAG+CGG 0.557119 1.1:+77703259 None:intergenic
CAAGGCAGACACCTCTGAGT+TGG 0.558674 1.1:+77701029 None:intergenic
TACAACAGTGTTGTCAAGAC+AGG 0.559306 1.1:-77700827 MS.gene71744:intron
TCCGATTCTTACTGCGCTCG+AGG 0.564136 1.1:-77703114 MS.gene71744:CDS
AGATGGAATGCGACCAAGCA+AGG 0.564270 1.1:+77701011 None:intergenic
GGTTGATAACCAACAGCAGA+TGG 0.565470 1.1:+77700994 None:intergenic
ACGGTTAAGAAGGTAAGCAT+AGG 0.566888 1.1:+77703319 None:intergenic
CCCTCTAACAACTCCTTCCG+TGG 0.568223 1.1:+77703010 None:intergenic
AACATAGATAGCTTGGACAG+AGG 0.572715 1.1:+77700906 None:intergenic
ATTTACACTGATAGGGGAGC+CGG 0.574020 1.1:+77702971 None:intergenic
CAACACGGGCACGAGCACCA+GGG 0.575730 1.1:+77701264 None:intergenic
CGTATTACAACCACCAAGAA+GGG 0.576665 1.1:-77700937 MS.gene71744:CDS
TTGTCAGGTGATTGGTGCTG+TGG 0.581396 1.1:-77703165 MS.gene71744:CDS
GGAAAGATTGGATTGTTTGG+TGG 0.584577 1.1:-77701682 MS.gene71744:CDS
TGAACATAGATCTCTGAGCT+TGG 0.584953 1.1:-77700704 MS.gene71744:intron
TCAAGTCGACATATTTGCCA+GGG 0.585073 1.1:+77700429 None:intergenic
ATACGAGATGTTGAATCCAA+TGG 0.586954 1.1:+77700662 None:intergenic
CAGTGAAGACTTCTGCCACA+TGG 0.590023 1.1:+77700456 None:intergenic
ATTCGCAAATACCTTGATAC+CGG 0.592050 1.1:+77701820 None:intergenic
CGGTTAAGAAGGTAAGCATA+GGG 0.593834 1.1:+77703320 None:intergenic
TTGGAGGTTGCACAACATAT+GGG 0.594665 1.1:-77703065 MS.gene71744:CDS
ATTTGCATACTTGAGTAAAG+CGG 0.595796 1.1:+77701162 None:intergenic
TTTGGATAGAGATGGACGGA+GGG 0.596872 1.1:+77703397 None:intergenic
AGCATCCAAGTGAGCAAAGG+TGG 0.598239 1.1:+77700849 None:intergenic
TGTTGTGAGAACTATTGCTA+TGG 0.599192 1.1:-77703036 MS.gene71744:CDS
ATTTGGATAGAGATGGACGG+AGG 0.599909 1.1:+77703396 None:intergenic
TCGGGTTCGTTCTCCAACAC+CGG 0.602823 1.1:+77701473 None:intergenic
ACTTATTAACAATGTCGCAA+AGG 0.603139 1.1:-77701626 MS.gene71744:CDS
AATTCCATTCAGGTTCCCGT+TGG 0.605383 1.1:-77702093 MS.gene71744:intron
CCACGGAAGGAGTTGTTAGA+GGG 0.608178 1.1:-77703010 MS.gene71744:CDS
TCAGGAACTTTCTTAGCCGG+AGG 0.611341 1.1:+77703242 None:intergenic
GAACAACAAATTCTTGTGAC+CGG 0.612009 1.1:-77701839 MS.gene71744:CDS
TCCAAGAGTACACCTGCCAA+CGG 0.615971 1.1:+77702077 None:intergenic
AGAGTTTCTGGATGTTGAGG+TGG 0.619022 1.1:+77703364 None:intergenic
CCAAGATCAGTAGACAATGT+TGG 0.620434 1.1:+77700973 None:intergenic
ACAAGTATTTACACTGATAG+GGG 0.621699 1.1:+77702965 None:intergenic
CATCTTGTCCTTCAGCATCA+CGG 0.623861 1.1:+77701210 None:intergenic
CGGAAGGAGTTGTTAGAGGG+TGG 0.625071 1.1:-77703007 MS.gene71744:CDS
ACATTGTCTACTGATCTTGG+AGG 0.626628 1.1:-77700970 MS.gene71744:CDS
GTGGATGTGAGATTCGAAGA+AGG 0.629837 1.1:-77703143 MS.gene71744:CDS
CTAATGCAGGGTGTGTTGGA+TGG 0.633559 1.1:-77699891 MS.gene71744:intron
ATTGCTATGGATGCCACGGA+AGG 0.637249 1.1:-77703023 MS.gene71744:CDS
CAAGTCGACATATTTGCCAG+GGG 0.638676 1.1:+77700430 None:intergenic
GTTGCACAACATATGGGTGA+AGG 0.642855 1.1:-77703059 MS.gene71744:CDS
CTCCTTGCACCATACCAAAG+AGG 0.642909 1.1:-77701706 MS.gene71744:CDS
GAACATTTCCGTGATGCTGA+AGG 0.644056 1.1:-77701218 MS.gene71744:CDS
TGTAGCATCCAAGTGAGCAA+AGG 0.644891 1.1:+77700846 None:intergenic
GGGTGGCGTGTTCTCAACAC+CGG 0.644892 1.1:-77702990 MS.gene71744:CDS
TTAGCCGGAGGAGTCTGAGG+AGG 0.645635 1.1:+77703254 None:intergenic
GGATAGAGATGGACGGAGGG+AGG 0.645699 1.1:+77703400 None:intergenic
AAAGGCAGAGAAGATTGCTA+AGG 0.647562 1.1:-77699805 MS.gene71744:CDS
TAATCCAGTAAGACCAACAC+GGG 0.647834 1.1:+77701250 None:intergenic
GTTGGAGAACGAACCCGAGA+GGG 0.654723 1.1:-77701468 MS.gene71744:CDS
ATGATTTGGATAGAGATGGA+CGG 0.656779 1.1:+77703393 None:intergenic
TACTTGTTGTACACCTCGAG+CGG 0.660570 1.1:+77700601 None:intergenic
CTGTAGCATACTCGGTAACA+CGG 0.661294 1.1:+77703300 None:intergenic
TCGAGCGCAGTAAGAATCGG+AGG 0.661465 1.1:+77703116 None:intergenic
TATTGATGAAGTCATTGCAA+AGG 0.663663 1.1:-77699823 MS.gene71744:CDS
GAAGATTGCTAAGGAAAATG+CGG 0.670742 1.1:-77699796 MS.gene71744:CDS
CTTGCACCATACCAAAGAGG+AGG 0.675495 1.1:-77701703 MS.gene71744:CDS
CCGGCTAAGAAAGTTCCTGA+CGG 0.676215 1.1:-77703239 MS.gene71744:CDS
GAGCACTACGAAACCGCTCG+AGG 0.679828 1.1:-77700614 MS.gene71744:CDS
CTTAAGTCAGCCCTTCCATG+TGG 0.684956 1.1:-77700471 MS.gene71744:CDS
GCTAAGAAAGTTCCTGACGG+TGG 0.702490 1.1:-77703236 MS.gene71744:CDS
TGTTGGAGAACGAACCCGAG+AGG 0.706147 1.1:-77701469 MS.gene71744:CDS
TACCGAGTATGCTACAGCCG+CGG 0.717503 1.1:-77703294 MS.gene71744:CDS
TTAATCCAGTAAGACCAACA+CGG 0.720007 1.1:+77701249 None:intergenic
ACACGGGCACGAGCACCAGG+GGG 0.727891 1.1:+77701266 None:intergenic
GTAATTGTAGGCCAACTCAG+AGG 0.729723 1.1:-77701040 MS.gene71744:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAACTAAATAATTTGATT+TGG - chr1.1:77702493-77702512 MS.gene71744:intron 10.0%
!!! ATATTTTTTAACTAAAATAC+CGG + chr1.1:77703183-77703202 None:intergenic 10.0%
!! AAAACAAGAAACTTAATTAA+TGG + chr1.1:77700774-77700793 None:intergenic 15.0%
!! ATTATAACTCTCATATTAAA+AGG + chr1.1:77702145-77702164 None:intergenic 15.0%
!! ATTGATTAATTAAACTAAAG+TGG - chr1.1:77702442-77702461 MS.gene71744:intron 15.0%
!! TTTCTATTATGAAGAATATT+AGG - chr1.1:77700712-77700731 MS.gene71744:intron 15.0%
!!! GTTTAAATTAAGGTTTTTAT+AGG - chr1.1:77703153-77703172 MS.gene71744:CDS 15.0%
!!! TAATTAAGTTTCTTGTTTTA+TGG - chr1.1:77700775-77700794 MS.gene71744:intron 15.0%
!! GTAACAAATAAAACATACAA+TGG - chr1.1:77700468-77700487 MS.gene71744:CDS 20.0%
!! TGAAAAAAATCATGTAAGAT+TGG + chr1.1:77701488-77701507 None:intergenic 20.0%
!! TTTATCAAAGTTCTTAACTA+TGG - chr1.1:77701880-77701899 MS.gene71744:CDS 20.0%
!!! AATGAAAAGTATAAACTATG+TGG + chr1.1:77701042-77701061 None:intergenic 20.0%
!!! ATGAAAAGTATAAACTATGT+GGG + chr1.1:77701041-77701060 None:intergenic 20.0%
!!! TTACATGATTTTTTTCATAC+AGG - chr1.1:77701491-77701510 MS.gene71744:CDS 20.0%
! AAAAACATTGTTAGAGCAAA+TGG + chr1.1:77701254-77701273 None:intergenic 25.0%
! AACAAGTATTTACACTGATA+GGG + chr1.1:77700267-77700286 None:intergenic 25.0%
! AAGATTACAGATGAATTTAC+TGG - chr1.1:77700019-77700038 MS.gene71744:intron 25.0%
! AATACTCGAAGCTTATTATA+AGG - chr1.1:77703075-77703094 MS.gene71744:CDS 25.0%
! AGAAACCACCTAATAATAAA+TGG + chr1.1:77701726-77701745 None:intergenic 25.0%
! ATACTCGAAGCTTATTATAA+GGG - chr1.1:77703076-77703095 MS.gene71744:CDS 25.0%
! ATATAGATAGTGATTAGTGA+AGG + chr1.1:77703027-77703046 None:intergenic 25.0%
! ATTAGTTCATAGAGAAAATC+CGG + chr1.1:77703322-77703341 None:intergenic 25.0%
! GAAGTAATTTAATCAGTGAA+TGG + chr1.1:77700611-77700630 None:intergenic 25.0%
! GAGTGTTTCCATTTATTATT+AGG - chr1.1:77701715-77701734 MS.gene71744:CDS 25.0%
! TATTGAAAAGAAAATTCCCA+AGG + chr1.1:77703059-77703078 None:intergenic 25.0%
! TGTTTATATACACTTCTTTC+TGG - chr1.1:77703122-77703141 MS.gene71744:CDS 25.0%
! TGTTTCCATTTATTATTAGG+TGG - chr1.1:77701718-77701737 MS.gene71744:CDS 25.0%
!! ATGTTTTTCTATCAATTCCA+TGG - chr1.1:77701266-77701285 MS.gene71744:CDS 25.0%
!! ATTTCTTCAATCTAAGATGA+TGG + chr1.1:77700351-77700370 None:intergenic 25.0%
!! TAAGGTTTTTATAGGAAAAC+CGG - chr1.1:77703161-77703180 MS.gene71744:CDS 25.0%
!! TGAAAAGTATAAACTATGTG+GGG + chr1.1:77701040-77701059 None:intergenic 25.0%
!! TGGCAATTGTAATGATATTT+TGG - chr1.1:77702462-77702481 MS.gene71744:intron 25.0%
!! TTATTTGTTACAAACACGAA+AGG + chr1.1:77700459-77700478 None:intergenic 25.0%
!!! CAAGATATCATTGCTATTTT+GGG - chr1.1:77702671-77702690 MS.gene71744:intron 25.0%
!!! CATTTCATTTTTTCTACTAG+TGG - chr1.1:77702913-77702932 MS.gene71744:intron 25.0%
!!! GGAAGTGTTTGTTTAAATTA+AGG - chr1.1:77703143-77703162 MS.gene71744:CDS 25.0%
!!! TCAAGATATCATTGCTATTT+TGG - chr1.1:77702670-77702689 MS.gene71744:intron 25.0%
AAAGAAAATTCCCAAGGAAT+AGG + chr1.1:77703053-77703072 None:intergenic 30.0%
ACAAGTATTTACACTGATAG+GGG + chr1.1:77700266-77700285 None:intergenic 30.0%
ACAGATGAATTTACTGGTAA+AGG - chr1.1:77700025-77700044 MS.gene71744:intron 30.0%
ACTTATTAACAATGTCGCAA+AGG - chr1.1:77701602-77701621 MS.gene71744:intron 30.0%
AGGAAAAACTGTGCTTATTA+TGG - chr1.1:77701578-77701597 MS.gene71744:intron 30.0%
ATAATGCCTGATGTAATTGT+AGG - chr1.1:77702176-77702195 MS.gene71744:intron 30.0%
ATCTATATGAACCTATTCCT+TGG - chr1.1:77703039-77703058 MS.gene71744:CDS 30.0%
ATGAATAGGCAAAAAATGCT+CGG + chr1.1:77701336-77701355 None:intergenic 30.0%
ATTTGCATACTTGAGTAAAG+CGG + chr1.1:77702069-77702088 None:intergenic 30.0%
CTCAAGTATGCAAATTATCT+AGG - chr1.1:77702074-77702093 MS.gene71744:CDS 30.0%
GAACAAGTATTTACACTGAT+AGG + chr1.1:77700268-77700287 None:intergenic 30.0%
TAAGTTCCTGTATGATCATA+AGG + chr1.1:77702881-77702900 None:intergenic 30.0%
TATAGAGAAATGATTGAGAG+TGG - chr1.1:77701793-77701812 MS.gene71744:intron 30.0%
TATTGATGAAGTCATTGCAA+AGG - chr1.1:77703405-77703424 MS.gene71744:CDS 30.0%
TCTATATGAACCTATTCCTT+GGG - chr1.1:77703040-77703059 MS.gene71744:CDS 30.0%
TGATCATACAGGAACTTATT+TGG - chr1.1:77702883-77702902 MS.gene71744:intron 30.0%
TTTCTCTATGAACTAATGCA+GGG - chr1.1:77703325-77703344 MS.gene71744:CDS 30.0%
! AGAGAATTGTACTAGTTTCA+AGG - chr1.1:77702823-77702842 MS.gene71744:intron 30.0%
! ATGAGTTGAAAAACATTCCA+TGG + chr1.1:77701286-77701305 None:intergenic 30.0%
! GATGATGGTGATATATAGAT+TGG + chr1.1:77700336-77700355 None:intergenic 30.0%
! TATGCTTTCACCACTTATTT+TGG - chr1.1:77702586-77702605 MS.gene71744:intron 30.0%
! TCTTAACTATGGTTGTTTCA+TGG - chr1.1:77701891-77701910 MS.gene71744:CDS 30.0%
! TGGACTGAAAAAAGATTTTG+AGG + chr1.1:77701234-77701253 None:intergenic 30.0%
! TGTAAAATGCTTGTTCTGAA+AGG + chr1.1:77703375-77703394 None:intergenic 30.0%
! TTCAGAACAAGCATTTTACA+TGG - chr1.1:77703375-77703394 MS.gene71744:CDS 30.0%
! TTTTCTCTATGAACTAATGC+AGG - chr1.1:77703324-77703343 MS.gene71744:CDS 30.0%
!! ATGCTTTCACCACTTATTTT+GGG - chr1.1:77702587-77702606 MS.gene71744:intron 30.0%
!!! TATCATTGCTATTTTGGGAA+TGG - chr1.1:77702676-77702695 MS.gene71744:intron 30.0%
AAATCCGGTCAAATTGTTTG+TGG + chr1.1:77703307-77703326 None:intergenic 35.0%
AAGCAACTTCCAAACAAATC+TGG + chr1.1:77702994-77703013 None:intergenic 35.0%
AATGCTTGTGAATTCCATTC+AGG - chr1.1:77701125-77701144 MS.gene71744:intron 35.0%
AATTCGCCTTTATGATCGAT+AGG + chr1.1:77701201-77701220 None:intergenic 35.0%
ATACGAGATGTTGAATCCAA+TGG + chr1.1:77702569-77702588 None:intergenic 35.0%
ATTCGCAAATACCTTGATAC+CGG + chr1.1:77701411-77701430 None:intergenic 35.0%
CAATCCACAAACAATTTGAC+CGG - chr1.1:77703300-77703319 MS.gene71744:CDS 35.0%
GAACAACAAATTCTTGTGAC+CGG - chr1.1:77701389-77701408 MS.gene71744:intron 35.0%
GAAGATTGCTAAGGAAAATG+CGG - chr1.1:77703432-77703451 MS.gene71744:CDS 35.0%
GGACGTATCATGAATGTTAT+TGG - chr1.1:77701171-77701190 MS.gene71744:intron 35.0%
GTATGATCATAAGGAAAGCA+TGG + chr1.1:77702872-77702891 None:intergenic 35.0%
GTTGCTTGTTCAACAAAAGT+AGG + chr1.1:77701368-77701387 None:intergenic 35.0%
TGATTGAGAAGAAGAGTTTC+TGG + chr1.1:77699879-77699898 None:intergenic 35.0%
TGCTTTCCTTATGATCATAC+AGG - chr1.1:77702872-77702891 MS.gene71744:intron 35.0%
TGGATTGCATAGAAACAAAC+TGG + chr1.1:77703287-77703306 None:intergenic 35.0%
TGTTGTGAGAACTATTGCTA+TGG - chr1.1:77700192-77700211 MS.gene71744:intron 35.0%
TTAATCCAGTAAGACCAACA+CGG + chr1.1:77701982-77702001 None:intergenic 35.0%
TTATGGTGAAGTTCTTTGCA+AGG - chr1.1:77700792-77700811 MS.gene71744:intron 35.0%
! AGCAAATGTGCTCTTGTTTA+TGG - chr1.1:77701926-77701945 MS.gene71744:intron 35.0%
! ATGATTTGGATAGAGATGGA+CGG + chr1.1:77699838-77699857 None:intergenic 35.0%
! GAACAAGCATTTTACATGGT+TGG - chr1.1:77703379-77703398 MS.gene71744:CDS 35.0%
! GCTCAATCTCAACTTTCTTT+TGG - chr1.1:77700987-77701006 MS.gene71744:CDS 35.0%
!! GGTCACAAGAATTTGTTGTT+CGG + chr1.1:77701390-77701409 None:intergenic 35.0%
AAAGGCAGAGAAGATTGCTA+AGG - chr1.1:77703423-77703442 MS.gene71744:CDS 40.0%
AACATAGATAGCTTGGACAG+AGG + chr1.1:77702325-77702344 None:intergenic 40.0%
AACTATTGCTATGGATGCCA+CGG - chr1.1:77700201-77700220 MS.gene71744:intron 40.0%
AACTTCCAAACAAATCTGGC+AGG + chr1.1:77702990-77703009 None:intergenic 40.0%
AATTCTTGTGACCGGTATCA+AGG - chr1.1:77701397-77701416 MS.gene71744:intron 40.0%
ACATTGTCTACTGATCTTGG+AGG - chr1.1:77702258-77702277 MS.gene71744:intron 40.0%
ACGGTTAAGAAGGTAAGCAT+AGG + chr1.1:77699912-77699931 None:intergenic 40.0%
AGAGGTAATTGAACCCTTCT+TGG + chr1.1:77702307-77702326 None:intergenic 40.0%
ATCCAATCTTTCCTCCTCTT+TGG + chr1.1:77701539-77701558 None:intergenic 40.0%
ATCTTTCCTCCTCTTTGGTA+TGG + chr1.1:77701534-77701553 None:intergenic 40.0%
CCAACATTGTCTACTGATCT+TGG - chr1.1:77702255-77702274 MS.gene71744:intron 40.0%
CCAAGATCAGTAGACAATGT+TGG + chr1.1:77702258-77702277 None:intergenic 40.0%
CGGTTAAGAAGGTAAGCATA+GGG + chr1.1:77699911-77699930 None:intergenic 40.0%
CGTATTACAACCACCAAGAA+GGG - chr1.1:77702291-77702310 MS.gene71744:intron 40.0%
GGAAAGATTGGATTGTTTGG+TGG - chr1.1:77701546-77701565 MS.gene71744:intron 40.0%
GGAGAACCTATCGATCATAA+AGG - chr1.1:77701192-77701211 MS.gene71744:CDS 40.0%
GGAGGAAAGATTGGATTGTT+TGG - chr1.1:77701543-77701562 MS.gene71744:intron 40.0%
GTAGGAGCTTCTCTATGAAT+AGG + chr1.1:77701350-77701369 None:intergenic 40.0%
TAATCCAGTAAGACCAACAC+GGG + chr1.1:77701981-77702000 None:intergenic 40.0%
TACAACAGTGTTGTCAAGAC+AGG - chr1.1:77702401-77702420 MS.gene71744:intron 40.0%
TACCAAAGAGGAGGAAAGAT+TGG - chr1.1:77701534-77701553 MS.gene71744:intron 40.0%
TATACAAGTCGTTACCCTCT+CGG + chr1.1:77701777-77701796 None:intergenic 40.0%
TCAAGTCGACATATTTGCCA+GGG + chr1.1:77702802-77702821 None:intergenic 40.0%
TCATTCTACCAGATTGGTGT+TGG - chr1.1:77700144-77700163 MS.gene71744:intron 40.0%
TCTCGATCATTCTACCAGAT+TGG - chr1.1:77700138-77700157 MS.gene71744:intron 40.0%
TGAACATAGATCTCTGAGCT+TGG - chr1.1:77702524-77702543 MS.gene71744:intron 40.0%
TGCTCATCACCCAAAATAAG+TGG + chr1.1:77702599-77702618 None:intergenic 40.0%
TTCAAGTCGACATATTTGCC+AGG + chr1.1:77702803-77702822 None:intergenic 40.0%
TTGGAGGTTGCACAACATAT+GGG - chr1.1:77700163-77700182 MS.gene71744:intron 40.0%
! AATTTTACGAGCACGTGCAA+CGG + chr1.1:77702729-77702748 None:intergenic 40.0%
! AGAAGAGTTTCTGGATGTTG+AGG + chr1.1:77699870-77699889 None:intergenic 40.0%
! AGGGATGATTTGGATAGAGA+TGG + chr1.1:77699842-77699861 None:intergenic 40.0%
! AGTTGGCCTACAATTACATC+AGG + chr1.1:77702185-77702204 None:intergenic 40.0%
! CAAGCATTTTACATGGTTGG+TGG - chr1.1:77703382-77703401 MS.gene71744:CDS 40.0%
! TTTACTGGTAAAGGTGCGAT+TGG - chr1.1:77700034-77700053 MS.gene71744:intron 40.0%
AACAATGTCGCAAAGGCTCA+TGG - chr1.1:77701609-77701628 MS.gene71744:intron 45.0%
AAGACTTCTGCCACATGGAA+GGG + chr1.1:77702770-77702789 None:intergenic 45.0%
ACTCGGTAACACGGTTAAGA+AGG + chr1.1:77699922-77699941 None:intergenic 45.0%
ATACAAGTCGTTACCCTCTC+GGG + chr1.1:77701776-77701795 None:intergenic 45.0%
ATTTACACTGATAGGGGAGC+CGG + chr1.1:77700260-77700279 None:intergenic 45.0%
ATTTGGATAGAGATGGACGG+AGG + chr1.1:77699835-77699854 None:intergenic 45.0%
CAAGTCGACATATTTGCCAG+GGG + chr1.1:77702801-77702820 None:intergenic 45.0%
CAGCAGGAACATAGATAGCT+TGG + chr1.1:77702332-77702351 None:intergenic 45.0%
CATCTTGTCCTTCAGCATCA+CGG + chr1.1:77702021-77702040 None:intergenic 45.0%
CTATCCTGCTGTTGATCCAT+TGG - chr1.1:77702550-77702569 MS.gene71744:intron 45.0%
CTGTAGCATACTCGGTAACA+CGG + chr1.1:77699931-77699950 None:intergenic 45.0%
GAACATTTCCGTGATGCTGA+AGG - chr1.1:77702010-77702029 MS.gene71744:intron 45.0%
GAATCCAATGGATCAACAGC+AGG + chr1.1:77702557-77702576 None:intergenic 45.0%
GAGAGTGGAGTCATTAAGCT+TGG - chr1.1:77701808-77701827 MS.gene71744:intron 45.0%
GCGTATTACAACCACCAAGA+AGG - chr1.1:77702290-77702309 MS.gene71744:intron 45.0%
GGTAATTGAACCCTTCTTGG+TGG + chr1.1:77702304-77702323 None:intergenic 45.0%
GTAATTGTAGGCCAACTCAG+AGG - chr1.1:77702188-77702207 MS.gene71744:intron 45.0%
GTGGATGTGAGATTCGAAGA+AGG - chr1.1:77700085-77700104 MS.gene71744:intron 45.0%
GTTGCACAACATATGGGTGA+AGG - chr1.1:77700169-77700188 MS.gene71744:intron 45.0%
GTTGGAGGTTGCACAACATA+TGG - chr1.1:77700162-77700181 MS.gene71744:intron 45.0%
TGAACTAATGCAGGGTGTGT+TGG - chr1.1:77703333-77703352 MS.gene71744:CDS 45.0%
TGTAGCATCCAAGTGAGCAA+AGG + chr1.1:77702385-77702404 None:intergenic 45.0%
TTTGGATAGAGATGGACGGA+GGG + chr1.1:77699834-77699853 None:intergenic 45.0%
! AATTCCATTCAGGTTCCCGT+TGG - chr1.1:77701135-77701154 MS.gene71744:intron 45.0%
! AGAGTTTCTGGATGTTGAGG+TGG + chr1.1:77699867-77699886 None:intergenic 45.0%
! CATTAAGCTTGGTGATCAGC+AGG - chr1.1:77701819-77701838 MS.gene71744:intron 45.0%
! CATTGCCTGCCAGATTTGTT+TGG - chr1.1:77702982-77703001 MS.gene71744:CDS 45.0%
! GTGAAGTGTCTGTGCTACAT+TGG - chr1.1:77700922-77700941 MS.gene71744:CDS 45.0%
!! ATTGGATTGTTTGGTGGTGC+TGG - chr1.1:77701552-77701571 MS.gene71744:intron 45.0%
!! GGTTGATAACCAACAGCAGA+TGG + chr1.1:77702237-77702256 None:intergenic 45.0%
!! TACTTGTTGTACACCTCGAG+CGG + chr1.1:77702630-77702649 None:intergenic 45.0%
!! TTCTACCAGATTGGTGTTGG+AGG - chr1.1:77700147-77700166 MS.gene71744:intron 45.0%
!!! GGTGGTTTCTCTGTTTTTGC+CGG - chr1.1:77701736-77701755 MS.gene71744:intron 45.0%
!!! TTCTCTGTTTTTGCCGGTGT+TGG - chr1.1:77701742-77701761 MS.gene71744:intron 45.0%
AAGAAAGTTCCTGACGGTGG+TGG - chr1.1:77699995-77700014 MS.gene71744:intron 50.0%
AAGTGAGCAAAGGTGGTAGC+TGG + chr1.1:77702375-77702394 None:intergenic 50.0%
ACCTCGAGCGCAGTAAGAAT+CGG + chr1.1:77700118-77700137 None:intergenic 50.0%
AGATGGAATGCGACCAAGCA+AGG + chr1.1:77702220-77702239 None:intergenic 50.0%
AGCATCCAAGTGAGCAAAGG+TGG + chr1.1:77702382-77702401 None:intergenic 50.0%
AGCTACCACCTTTGCTCACT+TGG - chr1.1:77702374-77702393 MS.gene71744:intron 50.0%
ATTGCTATGGATGCCACGGA+AGG - chr1.1:77700205-77700224 MS.gene71744:intron 50.0%
CAGTGAAGACTTCTGCCACA+TGG + chr1.1:77702775-77702794 None:intergenic 50.0%
CATGTGGCAGAAGTCTTCAC+TGG - chr1.1:77702773-77702792 MS.gene71744:intron 50.0%
CCACGGAAGGAGTTGTTAGA+GGG - chr1.1:77700218-77700237 MS.gene71744:intron 50.0%
CCGGCTAAGAAAGTTCCTGA+CGG - chr1.1:77699989-77700008 MS.gene71744:intron 50.0%
CCGTCAGGAACTTTCTTAGC+CGG + chr1.1:77699992-77700011 None:intergenic 50.0%
CTAATGCAGGGTGTGTTGGA+TGG - chr1.1:77703337-77703356 MS.gene71744:CDS 50.0%
CTCCTCTTTGGTATGGTGCA+AGG + chr1.1:77701527-77701546 None:intergenic 50.0%
CTCCTTGCACCATACCAAAG+AGG - chr1.1:77701522-77701541 MS.gene71744:intron 50.0%
CTTAAGTCAGCCCTTCCATG+TGG - chr1.1:77702757-77702776 MS.gene71744:intron 50.0%
CTTGCACCATACCAAAGAGG+AGG - chr1.1:77701525-77701544 MS.gene71744:intron 50.0%
GAAGACTTCTGCCACATGGA+AGG + chr1.1:77702771-77702790 None:intergenic 50.0%
GCTAAGAAAGTTCCTGACGG+TGG - chr1.1:77699992-77700011 MS.gene71744:intron 50.0%
GGACAGGTTTGTCAGGTGAT+TGG - chr1.1:77700055-77700074 MS.gene71744:intron 50.0%
GGATCTGTCAAGTCATCAGC+AGG + chr1.1:77702348-77702367 None:intergenic 50.0%
GTAATCTTTCCACCACCGTC+AGG + chr1.1:77700007-77700026 None:intergenic 50.0%
TCAGGAACTTTCTTAGCCGG+AGG + chr1.1:77699989-77700008 None:intergenic 50.0%
TCTGGATGTTGAGGTGGTGA+GGG + chr1.1:77699861-77699880 None:intergenic 50.0%
TGAGGTGGTGAGGGATGATT+TGG + chr1.1:77699852-77699871 None:intergenic 50.0%
TGCAACCTCCAACACCAATC+TGG + chr1.1:77700155-77700174 None:intergenic 50.0%
TGCGATTGGACAGGTTTGTC+AGG - chr1.1:77700048-77700067 MS.gene71744:intron 50.0%
TTCTGGATGTTGAGGTGGTG+AGG + chr1.1:77699862-77699881 None:intergenic 50.0%
! TCCAAGAGTACACCTGCCAA+CGG + chr1.1:77701154-77701173 None:intergenic 50.0%
! TGGTAAAGGTGCGATTGGAC+AGG - chr1.1:77700039-77700058 MS.gene71744:intron 50.0%
!! TTGTCAGGTGATTGGTGCTG+TGG - chr1.1:77700063-77700082 MS.gene71744:intron 50.0%
!! TTGTTTGGTGGTGCTGGTGT+AGG - chr1.1:77701558-77701577 MS.gene71744:intron 50.0%
CAAGGCAGACACCTCTGAGT+TGG + chr1.1:77702202-77702221 None:intergenic 55.0%
CCCTCTAACAACTCCTTCCG+TGG + chr1.1:77700221-77700240 None:intergenic 55.0%
CGGAAGGAGTTGTTAGAGGG+TGG - chr1.1:77700221-77700240 MS.gene71744:intron 55.0%
GCCACGGAAGGAGTTGTTAG+AGG - chr1.1:77700217-77700236 MS.gene71744:intron 55.0%
GGTCGCATTCCATCTGCTGT+TGG - chr1.1:77702225-77702244 MS.gene71744:intron 55.0%
GTTGGAGAACGAACCCGAGA+GGG - chr1.1:77701760-77701779 MS.gene71744:intron 55.0%
TACCGAGTATGCTACAGCCG+CGG - chr1.1:77699934-77699953 MS.gene71744:intron 55.0%
TCCGATTCTTACTGCGCTCG+AGG - chr1.1:77700114-77700133 MS.gene71744:intron 55.0%
TCGAGCGCAGTAAGAATCGG+AGG + chr1.1:77700115-77700134 None:intergenic 55.0%
TCGGGTTCGTTCTCCAACAC+CGG + chr1.1:77701758-77701777 None:intergenic 55.0%
TGTTGGAGAACGAACCCGAG+AGG - chr1.1:77701759-77701778 MS.gene71744:intron 55.0%
TTCTTAGCCGGAGGAGTCTG+AGG + chr1.1:77699980-77699999 None:intergenic 55.0%
! CCAAGAGTACACCTGCCAAC+GGG + chr1.1:77701153-77701172 None:intergenic 55.0%
!! TCAGAGGTGTCTGCCTTGCT+TGG - chr1.1:77702204-77702223 MS.gene71744:intron 55.0%
!! TCAGGTGATTGGTGCTGTGG+TGG - chr1.1:77700066-77700085 MS.gene71744:intron 55.0%
AGCCGCGGCTGTAGCATACT+CGG + chr1.1:77699939-77699958 None:intergenic 60.0%
CCCGTTGGCAGGTGTACTCT+TGG - chr1.1:77701150-77701169 MS.gene71744:intron 60.0%
CCTGCCAACGGGAACCTGAA+TGG + chr1.1:77701142-77701161 None:intergenic 60.0%
GAAGTCTTCACTGGTGCCCC+TGG - chr1.1:77702782-77702801 MS.gene71744:intron 60.0%
GAGCACTACGAAACCGCTCG+AGG - chr1.1:77702614-77702633 MS.gene71744:intron 60.0%
GCAAAGGTGGTAGCTGGAGC+AGG + chr1.1:77702369-77702388 None:intergenic 60.0%
GGATAGAGATGGACGGAGGG+AGG + chr1.1:77699831-77699850 None:intergenic 60.0%
GGGTGGCGTGTTCTCAACAC+CGG - chr1.1:77700238-77700257 MS.gene71744:intron 60.0%
GGTCAAATGAACGAGCCCCC+TGG - chr1.1:77701947-77701966 MS.gene71744:intron 60.0%
TTAGCCGGAGGAGTCTGAGG+AGG + chr1.1:77699977-77699996 None:intergenic 60.0%
! CCATTCAGGTTCCCGTTGGC+AGG - chr1.1:77701139-77701158 MS.gene71744:intron 60.0%
!! CGTGCCCGTGTTGGTCTTAC+TGG - chr1.1:77701974-77701993 MS.gene71744:intron 60.0%
AACACGGGCACGAGCACCAG+GGG + chr1.1:77701966-77701985 None:intergenic 65.0%
CAACACGGGCACGAGCACCA+GGG + chr1.1:77701967-77701986 None:intergenic 65.0%
CGCTCCTCCTCAGACTCCTC+CGG - chr1.1:77699970-77699989 MS.gene71744:intron 65.0%
CGGAGGAGTCTGAGGAGGAG+CGG + chr1.1:77699972-77699991 None:intergenic 65.0%
GGAGGAGTCTGAGGAGGAGC+GGG + chr1.1:77699971-77699990 None:intergenic 65.0%
ACACGGGCACGAGCACCAGG+GGG + chr1.1:77701965-77701984 None:intergenic 70.0%
CCAACACGGGCACGAGCACC+AGG + chr1.1:77701968-77701987 None:intergenic 70.0%
CCTGGTGCTCGTGCCCGTGT+TGG - chr1.1:77701965-77701984 MS.gene71744:intron 70.0%
AGCGGGAGCTGCAGCAGCCG+CGG + chr1.1:77699954-77699973 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr1.1 gene 77699791 77703459 77699791 ID=MS.gene71744
chr1.1 mRNA 77699791 77703459 77699791 ID=MS.gene71744.t1;Parent=MS.gene71744
chr1.1 exon 77702977 77703459 77702977 ID=MS.gene71744.t1.exon1;Parent=MS.gene71744.t1
chr1.1 CDS 77702977 77703459 77702977 ID=cds.MS.gene71744.t1;Parent=MS.gene71744.t1
chr1.1 exon 77702028 77702103 77702028 ID=MS.gene71744.t1.exon2;Parent=MS.gene71744.t1
chr1.1 CDS 77702028 77702103 77702028 ID=cds.MS.gene71744.t1;Parent=MS.gene71744.t1
chr1.1 exon 77701832 77701920 77701832 ID=MS.gene71744.t1.exon3;Parent=MS.gene71744.t1
chr1.1 CDS 77701832 77701920 77701832 ID=cds.MS.gene71744.t1;Parent=MS.gene71744.t1
chr1.1 exon 77701620 77701737 77701620 ID=MS.gene71744.t1.exon4;Parent=MS.gene71744.t1
chr1.1 CDS 77701620 77701737 77701620 ID=cds.MS.gene71744.t1;Parent=MS.gene71744.t1
chr1.1 exon 77701410 77701513 77701410 ID=MS.gene71744.t1.exon5;Parent=MS.gene71744.t1
chr1.1 CDS 77701410 77701513 77701410 ID=cds.MS.gene71744.t1;Parent=MS.gene71744.t1
chr1.1 exon 77701172 77701330 77701172 ID=MS.gene71744.t1.exon6;Parent=MS.gene71744.t1
chr1.1 CDS 77701172 77701330 77701172 ID=cds.MS.gene71744.t1;Parent=MS.gene71744.t1
chr1.1 exon 77700828 77701052 77700828 ID=MS.gene71744.t1.exon7;Parent=MS.gene71744.t1
chr1.1 CDS 77700828 77701052 77700828 ID=cds.MS.gene71744.t1;Parent=MS.gene71744.t1
chr1.1 exon 77700406 77700717 77700406 ID=MS.gene71744.t1.exon8;Parent=MS.gene71744.t1
chr1.1 CDS 77700406 77700717 77700406 ID=cds.MS.gene71744.t1;Parent=MS.gene71744.t1
chr1.1 exon 77699791 77699904 77699791 ID=MS.gene71744.t1.exon9;Parent=MS.gene71744.t1
chr1.1 CDS 77699791 77699904 77699791 ID=cds.MS.gene71744.t1;Parent=MS.gene71744.t1
Gene Sequence

>MS.gene71744

ATGGCTTCACGGAGAATCGTTTCATCTTTGATACGTTCCTCCCTCCGTCCATCTCTATCCAAATCATCCCTCACCACCTCAACATCCAGAAACTCTTCTTCTCAATCACGTGCATCTCCCTATGCTTACCTTCTTAACCGTGTTACCGAGTATGCTACAGCCGCGGCTGCTGCAGCTCCCGCTCCTCCTCAGACTCCTCCGGCTAAGAAAGTTCCTGACGGTGGTGGAAAGATTACAGATGAATTTACTGGTAAAGGTGCGATTGGACAGGTTTGTCAGGTGATTGGTGCTGTGGTGGATGTGAGATTCGAAGAAGGTTTGCCTCCGATTCTTACTGCGCTCGAGGTTCTCGATCATTCTACCAGATTGGTGTTGGAGGTTGCACAACATATGGGTGAAGGTGTTGTGAGAACTATTGCTATGGATGCCACGGAAGGAGTTGTTAGAGGGTGGCGTGTTCTCAACACCGGCTCCCCTATCAGTGTAAATACTTGTTCACTTGCTGCAATTTATTCATATTTCTTTAGTTAAATGTCATTTTTCCAATCTATATATCACCATCATCTTAGATTGAAGAAATAGACACATTTTTACATTCAATCACTTCTATTTTTTGTGTGTATATTTCAATATGTTTAATGTCTGTGTTAATGTTTCATGATCTTCCTTTCGTGTTTGTAACAAATAAAACATACAATGGCTTAAAAGTATCATATGTTTCAATTTCTATTTAGATTGAGATAAAAACAACTTTATATGTTGTTTTGTGTGAACATATATACATAACTTTTTTCTATAATGATCACAACATTCGTAACCATTCACTGATTAAATTACTTCATAGTGAAATATCAAAAAAAGTGTGTTTTCTTATCATTTTCAACACATTTTTCTATGTCGTTGTGTTTTCTTCTATCACATTTTCTATTATGAAGAATATTAGGTGATTTGATATAAATCAATATGAGTAATTTTTTATTCCATTAATTAAGTTTCTTGTTTTATGGTGAAGTTCTTTGCAAGGATATTGTTTTTGTTAGTTAGTCTATGAATTATACGACTATGAAACACTCACTTATAATAAGCAAATGAAAGTGTTAGTAAGTCTATCATATCATATATATCTTAAACGTGAAGTGTCTGTGCTACATTGGTTTACGATCATATTGCTATTGTGAATGTGATCTAATCAATCTGCTCAATCTCAACTTTCTTTTGGACTTGCATTTTGCTGACATGAATTTAGCCCCACATAGTTTATACTTTTCATTTTGTGTCTCTCAGTATCATTGAATTTCTATATTTTCTTTCAAAAAGCGTTTAAGTATATACTAAATGCTTGTGAATTCCATTCAGGTTCCCGTTGGCAGGTGTACTCTTGGACGTATCATGAATGTTATTGGAGAACCTATCGATCATAAAGGCGAATTTAGTAAGAAACCTCAAAATCTTTTTTCAGTCCATTTGCTCTAACAATGTTTTTCTATCAATTCCATGGAATGTTTTTCAACTCATGATAAATTTTGTGAATTGCTTTAGAAACCGAGCATTTTTTGCCTATTCATAGAGAAGCTCCTACTTTTGTTGAACAAGCAACCGAACAACAAATTCTTGTGACCGGTATCAAGGTATTTGCGAATGCATCAATCTCATTTTATTAAATGTTGACGTCTGCAAATATCTAATGTCTTTTACCAATCTTACATGATTTTTTTCATACAGGTTGTTGATCTCCTTGCACCATACCAAAGAGGAGGAAAGATTGGATTGTTTGGTGGTGCTGGTGTAGGAAAAACTGTGCTTATTATGGAACTTATTAACAATGTCGCAAAGGCTCATGGTATATATATGTGCTAAGTAAACATGCACTCAATTATTCTTGTTAAAATGCTCTTTAACATTTGTATATATACTATTGTATTCTGAGTGTTTCCATTTATTATTAGGTGGTTTCTCTGTTTTTGCCGGTGTTGGAGAACGAACCCGAGAGGGTAACGACTTGTATAGAGAAATGATTGAGAGTGGAGTCATTAAGCTTGGTGATCAGCAGGTGAACACAATGTTGTTCATGACTCACATTCTATTTATGTTTATCAAAGTTCTTAACTATGGTTGTTTCATGGATTCAGAGTGAAAGCAAATGTGCTCTTGTTTATGGTCAAATGAACGAGCCCCCTGGTGCTCGTGCCCGTGTTGGTCTTACTGGATTAACTGTTGCTGAACATTTCCGTGATGCTGAAGGACAAGATGTGCTTCTTTTCGTTGATAACATTTTCCGCTTTACTCAAGTATGCAAATTATCTAGGATAATCTATCTTCTATATATTTATCGATATTTTTGCTCATGTTCTCCTTTTAATATGAGAGTTATAATTGATCGACATTATAATGCCTGATGTAATTGTAGGCCAACTCAGAGGTGTCTGCCTTGCTTGGTCGCATTCCATCTGCTGTTGGTTATCAACCAACATTGTCTACTGATCTTGGAGGTCTTCAAGAGCGTATTACAACCACCAAGAAGGGTTCAATTACCTCTGTCCAAGCTATCTATGTTCCTGCTGATGACTTGACAGATCCTGCTCCAGCTACCACCTTTGCTCACTTGGATGCTACAACAGTGTTGTCAAGACAGGTTCTATCACTATGTTAATATTGATTAATTAAACTAAAGTGGCAATTGTAATGATATTTTGGTTGTTATCATTAACTAAATAATTTGATTTGGATAAATATTGAACATAGATCTCTGAGCTTGGTATCTATCCTGCTGTTGATCCATTGGATTCAACATCTCGTATGCTTTCACCACTTATTTTGGGTGATGAGCACTACGAAACCGCTCGAGGTGTACAACAAGTACTTCAAAACTACAAGAATCTTCAAGATATCATTGCTATTTTGGGAATGGATGAGCTAAGTGAAGATGATAAATTGACCGTTGCACGTGCTCGTAAAATTCAACGATTCTTAAGTCAGCCCTTCCATGTGGCAGAAGTCTTCACTGGTGCCCCTGGCAAATATGTCGACTTGAAAGAGAATTGTACTAGTTTCAAGGTACTTTTTTCTTTACTTTTCTCTCCATGCTTTCCTTATGATCATACAGGAACTTATTTGGTTACTATCATTTCATTTTTTCTACTAGTGGTAGATTATCATCTTCTGATATGCATTTTTAGTCTTTACTTTCAAAGCATTGCCTGCCAGATTTGTTTGGAAGTTGCTTATCTTTTGCTCCTTCACTAATCACTATCTATATGAACCTATTCCTTGGGAATTTTCTTTTCAATACTCGAAGCTTATTATAAGGGTTTAGAGTGTTTGTTTAAGCTAATGTTTATATACACTTCTTTCTGGAAGTGTTTGTTTAAATTAAGGTTTTTATAGGAAAACCGGTATTTTAGTTAAAAAATATAAAATAATCTGAAAATTATTTATTTGACTAACTTCTGAAAATAAATGTAATTTTTTTTTACATATGAGTTCACTTTAACTACCAGTTTGTTTCTATGCAATCCACAAACAATTTGACCGGATTTTCTCTATGAACTAATGCAGGGTGTGTTGGATGGCAAATACGATGACCTTTCAGAACAAGCATTTTACATGGTTGGTGGTATTGATGAAGTCATTGCAAAGGCAGAGAAGATTGCTAAGGAAAATGCGGCTTAA
Protein sequence

>MS.gene71744.t1

MASRRIVSSLIRSSLRPSLSKSSLTTSTSRNSSSQSRASPYAYLLNRVTEYATAAAAAAPAPPQTPPAKKVPDGGGKITDEFTGKGAIGQVCQVIGAVVDVRFEEGLPPILTALEVLDHSTRLVLEVAQHMGEGVVRTIAMDATEGVVRGWRVLNTGSPISVPVGRCTLGRIMNVIGEPIDHKGEFKTEHFLPIHREAPTFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGERTREGNDLYREMIESGVIKLGDQQSESKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFVDNIFRFTQANSEVSALLGRIPSAVGYQPTLSTDLGGLQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRMLSPLILGDEHYETARGVQQVLQNYKNLQDIIAILGMDELSEDDKLTVARARKIQRFLSQPFHVAEVFTGAPGKYVDLKENCTSFKGVLDGKYDDLSEQAFYMVGGIDEVIAKAEKIAKENAA