Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene056800.t1 | XP_013444819.1 | 100 | 185 | 0 | 0 | 1 | 185 | 1 | 185 | 4.00E-100 | 374 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene056800.t1 | P42749 | 81.4 | 188 | 29 | 2 | 1 | 185 | 1 | 185 | 2.3e-80 | 299.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene056800.t1 | A0A072TMX8 | 100.0 | 185 | 0 | 0 | 1 | 185 | 1 | 185 | 2.9e-100 | 374.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene40572 | MS.gene056800 | PPI |
MS.gene052308 | MS.gene056800 | PPI |
MS.gene056800 | MS.gene031830 | PPI |
MS.gene060137 | MS.gene056800 | PPI |
MS.gene21678 | MS.gene056800 | PPI |
MS.gene21952 | MS.gene056800 | PPI |
MS.gene22290 | MS.gene056800 | PPI |
MS.gene060634 | MS.gene056800 | PPI |
MS.gene056800 | MS.gene029540 | PPI |
MS.gene92963 | MS.gene056800 | PPI |
MS.gene003373 | MS.gene056800 | PPI |
MS.gene024700 | MS.gene056800 | PPI |
MS.gene28923 | MS.gene056800 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene056800.t1 | MTR_8g028920 | 100.000 | 185 | 0 | 0 | 1 | 185 | 1 | 185 | 2.87e-138 | 383 |
MS.gene056800.t1 | MTR_8g028920 | 99.306 | 144 | 1 | 0 | 42 | 185 | 3 | 146 | 9.53e-105 | 297 |
MS.gene056800.t1 | MTR_8g098595 | 81.765 | 170 | 28 | 1 | 16 | 185 | 1 | 167 | 4.99e-103 | 293 |
MS.gene056800.t1 | MTR_4g106690 | 73.370 | 184 | 49 | 0 | 1 | 184 | 1 | 184 | 1.38e-99 | 285 |
MS.gene056800.t1 | MTR_1g073600 | 65.179 | 112 | 21 | 2 | 33 | 140 | 22 | 119 | 1.40e-45 | 147 |
MS.gene056800.t1 | MTR_8g098615 | 77.465 | 71 | 16 | 0 | 10 | 80 | 1 | 71 | 5.91e-37 | 123 |
MS.gene056800.t1 | MTR_8g098615 | 79.688 | 64 | 13 | 0 | 17 | 80 | 1 | 64 | 1.93e-33 | 114 |
MS.gene056800.t1 | MTR_8g098635 | 73.529 | 68 | 18 | 0 | 16 | 83 | 6 | 73 | 2.23e-29 | 111 |
MS.gene056800.t1 | MTR_1g073390 | 66.667 | 84 | 18 | 4 | 16 | 98 | 1 | 75 | 2.69e-28 | 101 |
MS.gene056800.t1 | MTR_5g075580 | 37.398 | 123 | 75 | 2 | 25 | 147 | 26 | 146 | 1.04e-26 | 99.4 |
MS.gene056800.t1 | MTR_3g062450 | 37.398 | 123 | 75 | 2 | 25 | 147 | 26 | 146 | 1.21e-26 | 99.4 |
MS.gene056800.t1 | MTR_5g075580 | 40.909 | 110 | 63 | 2 | 38 | 147 | 10 | 117 | 1.97e-26 | 97.8 |
MS.gene056800.t1 | MTR_8g071040 | 34.459 | 148 | 94 | 3 | 1 | 147 | 1 | 146 | 2.57e-26 | 98.6 |
MS.gene056800.t1 | MTR_7g116940 | 37.398 | 123 | 75 | 2 | 25 | 147 | 26 | 146 | 3.02e-26 | 98.2 |
MS.gene056800.t1 | MTR_7g116940 | 37.984 | 129 | 73 | 3 | 25 | 147 | 26 | 153 | 3.23e-26 | 98.2 |
MS.gene056800.t1 | MTR_4g073240 | 35.772 | 123 | 77 | 2 | 25 | 147 | 26 | 146 | 1.33e-25 | 96.7 |
MS.gene056800.t1 | MTR_2g078010 | 38.017 | 121 | 73 | 2 | 27 | 147 | 32 | 150 | 1.46e-25 | 96.7 |
MS.gene056800.t1 | MTR_4g073240 | 39.091 | 110 | 65 | 2 | 38 | 147 | 10 | 117 | 2.36e-25 | 95.1 |
MS.gene056800.t1 | MTR_1g021150 | 39.091 | 110 | 65 | 2 | 38 | 147 | 39 | 146 | 4.26e-25 | 95.1 |
MS.gene056800.t1 | MTR_4g108080 | 30.201 | 149 | 98 | 3 | 1 | 145 | 1 | 147 | 4.89e-25 | 95.1 |
MS.gene056800.t1 | MTR_8g468530 | 30.201 | 149 | 98 | 3 | 1 | 145 | 17 | 163 | 5.95e-25 | 95.5 |
MS.gene056800.t1 | MTR_3g098780 | 30.882 | 136 | 93 | 1 | 18 | 153 | 21 | 155 | 8.65e-25 | 95.9 |
MS.gene056800.t1 | MTR_3g098780 | 30.882 | 136 | 93 | 1 | 18 | 153 | 45 | 179 | 1.56e-24 | 95.5 |
MS.gene056800.t1 | MTR_2g078010 | 42.424 | 99 | 55 | 2 | 27 | 125 | 32 | 128 | 1.90e-24 | 93.6 |
MS.gene056800.t1 | MTR_1g021150 | 39.091 | 110 | 65 | 2 | 38 | 147 | 47 | 154 | 2.60e-24 | 93.6 |
MS.gene056800.t1 | MTR_3g110110 | 30.882 | 136 | 90 | 3 | 18 | 150 | 21 | 155 | 2.67e-22 | 88.2 |
MS.gene056800.t1 | MTR_4g108080 | 34.259 | 108 | 69 | 2 | 38 | 145 | 42 | 147 | 2.98e-22 | 88.2 |
MS.gene056800.t1 | MTR_2g078010 | 34.074 | 135 | 73 | 3 | 27 | 147 | 32 | 164 | 8.64e-22 | 87.4 |
MS.gene056800.t1 | MTR_2g078010 | 42.857 | 77 | 43 | 1 | 27 | 103 | 32 | 107 | 4.27e-21 | 84.0 |
MS.gene056800.t1 | MTR_1g095510 | 36.154 | 130 | 77 | 4 | 2 | 127 | 40 | 167 | 4.34e-18 | 78.2 |
MS.gene056800.t1 | MTR_7g087590 | 27.778 | 144 | 99 | 3 | 21 | 161 | 31 | 172 | 7.25e-18 | 79.0 |
MS.gene056800.t1 | MTR_5g009020 | 32.800 | 125 | 79 | 4 | 6 | 127 | 35 | 157 | 2.05e-17 | 76.3 |
MS.gene056800.t1 | MTR_7g116940 | 35.366 | 82 | 52 | 1 | 25 | 106 | 26 | 106 | 7.80e-17 | 73.2 |
MS.gene056800.t1 | MTR_4g076200 | 32.800 | 125 | 79 | 4 | 6 | 127 | 35 | 157 | 2.03e-16 | 73.6 |
MS.gene056800.t1 | MTR_4g108080 | 28.037 | 107 | 72 | 2 | 1 | 103 | 1 | 106 | 9.94e-16 | 70.1 |
MS.gene056800.t1 | MTR_4g076200 | 35.556 | 90 | 56 | 2 | 38 | 127 | 29 | 116 | 2.77e-15 | 69.3 |
MS.gene056800.t1 | MTR_1g095510 | 36.634 | 101 | 59 | 3 | 2 | 98 | 40 | 139 | 4.50e-15 | 69.7 |
MS.gene056800.t1 | MTR_5g019480 | 34.615 | 104 | 64 | 4 | 39 | 141 | 67 | 167 | 1.46e-14 | 68.6 |
MS.gene056800.t1 | MTR_5g019480 | 34.615 | 104 | 64 | 4 | 39 | 141 | 70 | 170 | 1.51e-14 | 68.6 |
MS.gene056800.t1 | MTR_5g019480 | 34.615 | 104 | 64 | 4 | 39 | 141 | 19 | 119 | 1.57e-14 | 67.4 |
MS.gene056800.t1 | MTR_4g073240 | 35.366 | 82 | 51 | 2 | 66 | 147 | 5 | 84 | 5.77e-14 | 64.7 |
MS.gene056800.t1 | MTR_1g095510 | 34.906 | 106 | 65 | 4 | 38 | 142 | 26 | 128 | 8.32e-14 | 65.5 |
MS.gene056800.t1 | MTR_8g085690 | 29.268 | 123 | 85 | 2 | 26 | 148 | 48 | 168 | 2.10e-13 | 65.1 |
MS.gene056800.t1 | MTR_5g016630 | 30.000 | 120 | 80 | 3 | 29 | 146 | 38 | 155 | 4.20e-13 | 64.3 |
MS.gene056800.t1 | MTR_4g094872 | 29.771 | 131 | 85 | 4 | 21 | 146 | 27 | 155 | 1.19e-12 | 63.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene056800.t1 | AT1G63800 | 82.632 | 190 | 23 | 3 | 1 | 185 | 1 | 185 | 2.29e-111 | 315 |
MS.gene056800.t1 | AT5G41340 | 80.729 | 192 | 25 | 3 | 1 | 185 | 1 | 187 | 5.17e-103 | 294 |
MS.gene056800.t1 | AT1G63800 | 81.143 | 175 | 23 | 3 | 16 | 185 | 1 | 170 | 5.25e-100 | 286 |
MS.gene056800.t1 | AT2G46030 | 80.921 | 152 | 29 | 0 | 1 | 152 | 1 | 152 | 5.33e-95 | 274 |
MS.gene056800.t1 | AT2G46030 | 80.921 | 152 | 29 | 0 | 1 | 152 | 1 | 152 | 5.33e-95 | 274 |
MS.gene056800.t1 | AT2G46030 | 71.892 | 185 | 50 | 1 | 1 | 185 | 73 | 255 | 1.28e-94 | 275 |
MS.gene056800.t1 | AT2G46030 | 69.364 | 173 | 51 | 1 | 13 | 185 | 16 | 186 | 3.05e-84 | 247 |
MS.gene056800.t1 | AT2G46030 | 69.364 | 173 | 51 | 1 | 13 | 185 | 16 | 186 | 3.05e-84 | 247 |
MS.gene056800.t1 | AT5G41340 | 78.523 | 149 | 20 | 3 | 44 | 185 | 9 | 152 | 7.46e-75 | 222 |
MS.gene056800.t1 | AT3G08690 | 37.162 | 148 | 90 | 3 | 1 | 147 | 1 | 146 | 1.44e-27 | 101 |
MS.gene056800.t1 | AT3G08690 | 37.162 | 148 | 90 | 3 | 1 | 147 | 1 | 146 | 1.44e-27 | 101 |
MS.gene056800.t1 | AT1G64230 | 39.024 | 123 | 73 | 2 | 25 | 147 | 26 | 146 | 2.23e-27 | 101 |
MS.gene056800.t1 | AT1G64230 | 39.024 | 123 | 73 | 2 | 25 | 147 | 26 | 146 | 2.23e-27 | 101 |
MS.gene056800.t1 | AT5G41700 | 38.211 | 123 | 74 | 2 | 25 | 147 | 26 | 146 | 3.44e-27 | 100 |
MS.gene056800.t1 | AT5G41700 | 38.211 | 123 | 74 | 2 | 25 | 147 | 26 | 146 | 3.44e-27 | 100 |
MS.gene056800.t1 | AT5G41700 | 38.211 | 123 | 74 | 2 | 25 | 147 | 26 | 146 | 3.44e-27 | 100 |
MS.gene056800.t1 | AT1G64230 | 38.281 | 128 | 77 | 2 | 20 | 147 | 30 | 155 | 3.61e-27 | 100 |
MS.gene056800.t1 | AT5G41700 | 38.211 | 123 | 74 | 2 | 25 | 147 | 27 | 147 | 4.68e-27 | 100 |
MS.gene056800.t1 | AT1G64230 | 39.024 | 123 | 73 | 2 | 25 | 147 | 68 | 188 | 5.54e-27 | 101 |
MS.gene056800.t1 | AT1G64230 | 39.024 | 123 | 73 | 2 | 25 | 147 | 68 | 188 | 5.54e-27 | 101 |
MS.gene056800.t1 | AT5G53300 | 38.211 | 123 | 74 | 2 | 25 | 147 | 26 | 146 | 7.72e-27 | 99.8 |
MS.gene056800.t1 | AT5G53300 | 38.211 | 123 | 74 | 2 | 25 | 147 | 26 | 146 | 7.72e-27 | 99.8 |
MS.gene056800.t1 | AT5G53300 | 38.211 | 123 | 74 | 2 | 25 | 147 | 26 | 146 | 7.72e-27 | 99.8 |
MS.gene056800.t1 | AT5G56150 | 38.525 | 122 | 73 | 2 | 26 | 147 | 27 | 146 | 1.14e-26 | 99.4 |
MS.gene056800.t1 | AT4G27960 | 37.398 | 123 | 75 | 2 | 25 | 147 | 26 | 146 | 2.52e-26 | 98.6 |
MS.gene056800.t1 | AT1G78870 | 38.843 | 121 | 72 | 2 | 27 | 147 | 32 | 150 | 9.22e-26 | 97.1 |
MS.gene056800.t1 | AT1G16890 | 38.017 | 121 | 73 | 2 | 27 | 147 | 32 | 150 | 1.68e-25 | 96.7 |
MS.gene056800.t1 | AT4G27960 | 37.398 | 123 | 75 | 2 | 25 | 147 | 56 | 176 | 1.91e-25 | 97.1 |
MS.gene056800.t1 | AT1G16890 | 38.655 | 119 | 71 | 2 | 29 | 147 | 1 | 117 | 2.92e-25 | 94.7 |
MS.gene056800.t1 | AT1G16890 | 38.017 | 121 | 73 | 2 | 27 | 147 | 41 | 159 | 3.16e-25 | 95.9 |
MS.gene056800.t1 | AT3G08700 | 41.818 | 110 | 62 | 2 | 38 | 147 | 40 | 147 | 3.66e-25 | 95.5 |
MS.gene056800.t1 | AT3G08700 | 41.818 | 110 | 62 | 2 | 38 | 147 | 40 | 147 | 3.66e-25 | 95.5 |
MS.gene056800.t1 | AT2G02760 | 30.201 | 149 | 98 | 3 | 1 | 145 | 1 | 147 | 6.28e-25 | 95.1 |
MS.gene056800.t1 | AT2G02760 | 30.201 | 149 | 98 | 3 | 1 | 145 | 1 | 147 | 6.28e-25 | 95.1 |
MS.gene056800.t1 | AT2G02760 | 30.201 | 149 | 98 | 3 | 1 | 145 | 1 | 147 | 6.28e-25 | 95.1 |
MS.gene056800.t1 | AT2G02760 | 30.201 | 149 | 98 | 3 | 1 | 145 | 1 | 147 | 6.28e-25 | 95.1 |
MS.gene056800.t1 | AT2G16740 | 34.694 | 147 | 90 | 3 | 5 | 147 | 2 | 146 | 6.30e-25 | 94.7 |
MS.gene056800.t1 | AT1G78870 | 38.655 | 119 | 71 | 2 | 29 | 147 | 1 | 117 | 6.42e-25 | 94.0 |
MS.gene056800.t1 | AT5G62540 | 32.215 | 149 | 95 | 3 | 1 | 145 | 1 | 147 | 3.62e-24 | 92.8 |
MS.gene056800.t1 | AT1G14400 | 29.530 | 149 | 99 | 3 | 1 | 145 | 1 | 147 | 3.69e-24 | 93.2 |
MS.gene056800.t1 | AT1G14400 | 29.530 | 149 | 99 | 3 | 1 | 145 | 1 | 147 | 3.69e-24 | 93.2 |
MS.gene056800.t1 | AT1G78870 | 38.333 | 120 | 71 | 3 | 29 | 147 | 1 | 118 | 3.95e-23 | 89.4 |
MS.gene056800.t1 | AT5G25760 | 35.088 | 114 | 71 | 2 | 17 | 128 | 20 | 132 | 6.74e-23 | 89.7 |
MS.gene056800.t1 | AT5G25760 | 35.088 | 114 | 71 | 2 | 17 | 128 | 20 | 132 | 6.74e-23 | 89.7 |
MS.gene056800.t1 | AT5G50870 | 30.534 | 131 | 90 | 1 | 18 | 148 | 21 | 150 | 1.22e-22 | 90.1 |
MS.gene056800.t1 | AT3G24515 | 28.750 | 160 | 107 | 4 | 19 | 174 | 60 | 216 | 6.16e-22 | 92.0 |
MS.gene056800.t1 | AT1G78870 | 44.156 | 77 | 42 | 1 | 27 | 103 | 32 | 107 | 1.11e-21 | 85.5 |
MS.gene056800.t1 | AT3G24515 | 33.071 | 127 | 79 | 3 | 34 | 156 | 49 | 173 | 2.15e-20 | 87.8 |
MS.gene056800.t1 | AT1G36340 | 30.769 | 130 | 88 | 2 | 18 | 147 | 25 | 152 | 4.14e-20 | 82.4 |
MS.gene056800.t1 | AT1G36340 | 30.769 | 130 | 88 | 2 | 18 | 147 | 25 | 152 | 4.14e-20 | 82.4 |
MS.gene056800.t1 | AT5G50870 | 33.333 | 108 | 71 | 1 | 18 | 125 | 21 | 127 | 6.61e-20 | 83.2 |
MS.gene056800.t1 | AT5G56150 | 38.272 | 81 | 49 | 1 | 26 | 106 | 27 | 106 | 1.12e-18 | 77.8 |
MS.gene056800.t1 | AT5G41700 | 37.805 | 82 | 50 | 1 | 25 | 106 | 26 | 106 | 1.51e-18 | 78.2 |
MS.gene056800.t1 | AT5G53300 | 39.286 | 84 | 49 | 2 | 25 | 107 | 26 | 108 | 5.10e-18 | 75.9 |
MS.gene056800.t1 | AT3G13550 | 30.081 | 123 | 84 | 2 | 26 | 148 | 62 | 182 | 9.16e-18 | 77.0 |
MS.gene056800.t1 | AT5G05080 | 27.083 | 144 | 100 | 3 | 21 | 161 | 31 | 172 | 1.37e-16 | 75.5 |
MS.gene056800.t1 | AT5G05080 | 27.083 | 144 | 100 | 3 | 21 | 161 | 31 | 172 | 1.37e-16 | 75.5 |
MS.gene056800.t1 | AT5G05080 | 27.083 | 144 | 100 | 3 | 21 | 161 | 31 | 172 | 1.37e-16 | 75.5 |
MS.gene056800.t1 | AT5G05080 | 27.083 | 144 | 100 | 3 | 21 | 161 | 31 | 172 | 1.37e-16 | 75.5 |
MS.gene056800.t1 | AT2G18600 | 36.538 | 104 | 62 | 4 | 39 | 141 | 69 | 169 | 7.81e-16 | 72.0 |
MS.gene056800.t1 | AT2G18600 | 36.538 | 104 | 62 | 4 | 39 | 141 | 69 | 169 | 7.81e-16 | 72.0 |
MS.gene056800.t1 | AT3G20060 | 29.932 | 147 | 93 | 5 | 6 | 149 | 39 | 178 | 1.62e-15 | 71.2 |
MS.gene056800.t1 | AT4G36800 | 33.654 | 104 | 65 | 4 | 39 | 141 | 68 | 168 | 7.01e-15 | 69.7 |
MS.gene056800.t1 | AT4G36800 | 33.654 | 104 | 65 | 4 | 39 | 141 | 68 | 168 | 7.01e-15 | 69.7 |
MS.gene056800.t1 | AT3G20060 | 31.250 | 112 | 70 | 3 | 38 | 149 | 29 | 133 | 2.26e-14 | 67.0 |
MS.gene056800.t1 | AT2G32790 | 38.596 | 114 | 64 | 4 | 37 | 148 | 67 | 176 | 4.27e-14 | 67.4 |
MS.gene056800.t1 | AT1G50490 | 30.357 | 112 | 71 | 3 | 38 | 149 | 73 | 177 | 1.19e-12 | 63.5 |
MS.gene056800.t1 | AT3G13550 | 30.769 | 91 | 61 | 2 | 26 | 116 | 62 | 150 | 1.50e-12 | 63.2 |
Find 50 sgRNAs with CRISPR-Local
Find 184 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTTCACTGGGTCCATGAAAA+TGG | 0.224067 | 8.4:+66576894 | None:intergenic |
GTGGCAGCTCCAATGTCTTC+TGG | 0.271016 | 8.4:+66573812 | None:intergenic |
ACTTATGAACAAAGGGTTAA+AGG | 0.277663 | 8.4:-66575766 | MS.gene056800:intron |
TAGGATGATGAGTGATTATA+AGG | 0.329799 | 8.4:-66576954 | MS.gene056800:CDS |
CCTTATAAGTCTCCTTCAAT+AGG | 0.346660 | 8.4:-66576213 | MS.gene056800:CDS |
CCTATTGAAGGAGACTTATA+AGG | 0.347185 | 8.4:+66576213 | None:intergenic |
GAAAGGGAAATTACTTTCAC+TGG | 0.349026 | 8.4:+66576880 | None:intergenic |
GCATACATCTCATCAACATT+TGG | 0.367032 | 8.4:+66576168 | None:intergenic |
ATTCAAGGGGTCTGATGGAT+TGG | 0.407535 | 8.4:+66575825 | None:intergenic |
AGCCGCAGCTTCTCCATTCA+AGG | 0.418137 | 8.4:+66575810 | None:intergenic |
AGATCTTGTCAATGTATTTG+AGG | 0.418840 | 8.4:-66575875 | MS.gene056800:CDS |
CAGACCTGGAGCCCCATGTT+TGG | 0.418844 | 8.4:-66576005 | MS.gene056800:intron |
CATACATCTCATCAACATTT+GGG | 0.422172 | 8.4:+66576169 | None:intergenic |
TCCATCTCTCGTCGCTTGCT+TGG | 0.445114 | 8.4:+66577094 | None:intergenic |
TTCCACACACCTCCTTGATA+AGG | 0.450621 | 8.4:+66576264 | None:intergenic |
TTAACCCTTTGTTCATAAGT+AGG | 0.451976 | 8.4:+66575769 | None:intergenic |
ATATGATTCTAGTGATGAAC+AGG | 0.462460 | 8.4:-66573744 | MS.gene056800:CDS |
TCTCCATTCAAGGGGTCTGA+TGG | 0.467004 | 8.4:+66575820 | None:intergenic |
TAGCTCCTCATCTTCATCAC+TGG | 0.468953 | 8.4:+66573778 | None:intergenic |
AATCCATCAGACCCCTTGAA+TGG | 0.470739 | 8.4:-66575823 | MS.gene056800:CDS |
ATCACTGGATTTCTCTTCTG+TGG | 0.473541 | 8.4:+66573793 | None:intergenic |
ATTACCAAACATGGGGCTCC+AGG | 0.484505 | 8.4:+66576001 | None:intergenic |
TTCAAGGGGTCTGATGGATT+GGG | 0.486397 | 8.4:+66575826 | None:intergenic |
ACCAAGCAAGCGACGAGAGA+TGG | 0.500308 | 8.4:-66577095 | MS.gene056800:CDS |
GACTTATAAGGATAAGCATC+CGG | 0.502445 | 8.4:+66576225 | None:intergenic |
CCCTTTGTTCATAAGTAGGT+CGG | 0.512751 | 8.4:+66575773 | None:intergenic |
TTATTGATGAAACCTATTGA+AGG | 0.514930 | 8.4:+66576201 | None:intergenic |
AGACAGATCATTACCAAACA+TGG | 0.530682 | 8.4:+66575992 | None:intergenic |
CGACAATTTCAGGTCAGGAT+CGG | 0.534963 | 8.4:-66576048 | MS.gene056800:intron |
CCGACCTACTTATGAACAAA+GGG | 0.543975 | 8.4:-66575773 | MS.gene056800:CDS |
CTCATGTCAGGTCCTTATCA+AGG | 0.551300 | 8.4:-66576276 | MS.gene056800:intron |
GAAATCCAGTGATGAAGATG+AGG | 0.558452 | 8.4:-66573783 | MS.gene056800:CDS |
GCCGCAGCTTCTCCATTCAA+GGG | 0.563383 | 8.4:+66575811 | None:intergenic |
GACAGATCATTACCAAACAT+GGG | 0.570080 | 8.4:+66575993 | None:intergenic |
GAAAGTAAGAGTTGAGCTAC+CGG | 0.580502 | 8.4:-66576244 | MS.gene056800:CDS |
TCTAGTGATGAACAGGTGGC+TGG | 0.581781 | 8.4:-66573737 | MS.gene056800:CDS |
TATGCGAAGCCAGAAGACAT+TGG | 0.591557 | 8.4:-66573821 | MS.gene056800:CDS |
AAAGGGAAATTACTTTCACT+GGG | 0.594682 | 8.4:+66576881 | None:intergenic |
ACCGACCTACTTATGAACAA+AGG | 0.596006 | 8.4:-66575774 | MS.gene056800:CDS |
GATGATGAGTGATTATAAGG+TGG | 0.599886 | 8.4:-66576951 | MS.gene056800:CDS |
AAGGTGGAAATGATTAACGA+TGG | 0.607049 | 8.4:-66576935 | MS.gene056800:CDS |
GTCCTTATCAAGGAGGTGTG+TGG | 0.614843 | 8.4:-66576266 | MS.gene056800:CDS |
TTGGGATACAGAAGGAGTTG+TGG | 0.619225 | 8.4:+66575844 | None:intergenic |
CCCCTTGAATGGAGAAGCTG+CGG | 0.633020 | 8.4:-66575812 | MS.gene056800:CDS |
CCGCAGCTTCTCCATTCAAG+GGG | 0.647061 | 8.4:+66575812 | None:intergenic |
CTGATGGATTGGGATACAGA+AGG | 0.649918 | 8.4:+66575836 | None:intergenic |
TTGATGTTATCAATCAGACC+TGG | 0.663364 | 8.4:-66576019 | MS.gene056800:CDS |
TGATTCTAGTGATGAACAGG+TGG | 0.687145 | 8.4:-66573741 | MS.gene056800:CDS |
ACAGATCATTACCAAACATG+GGG | 0.700700 | 8.4:+66575994 | None:intergenic |
ATGTCAGGTCCTTATCAAGG+AGG | 0.713248 | 8.4:-66576273 | MS.gene056800:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATTTTTAGTATGAAAATAAT+TGG | - | chr8.4:66574327-66574346 | MS.gene056800:intron | 10.0% |
!!! | TTTTGTTTTTTTTCTATTAA+GGG | - | chr8.4:66574020-66574039 | MS.gene056800:intron | 10.0% |
!!! | TTTTTGTTTTTTTTCTATTA+AGG | - | chr8.4:66574019-66574038 | MS.gene056800:intron | 10.0% |
!! | AAACAAATTATAGAAAAGAA+AGG | + | chr8.4:66573964-66573983 | None:intergenic | 15.0% |
!! | AACAAATTATAGAAAAGAAA+GGG | + | chr8.4:66573963-66573982 | None:intergenic | 15.0% |
!! | GTTAAATTTATAAATGAAAG+AGG | - | chr8.4:66575687-66575706 | MS.gene056800:intron | 15.0% |
!! | TTAAAATTAATTAACATGTG+AGG | + | chr8.4:66574725-66574744 | None:intergenic | 15.0% |
!!! | AATTGTTCATTTTTTGTATA+AGG | - | chr8.4:66576209-66576228 | MS.gene056800:CDS | 15.0% |
!!! | ACAATATTTTTGGTTAATTT+TGG | - | chr8.4:66574210-66574229 | MS.gene056800:intron | 15.0% |
!!! | AGATATAATTTTTAACTCAA+GGG | - | chr8.4:66575828-66575847 | MS.gene056800:CDS | 15.0% |
!!! | ATCTTTTTATATTTTCTTTG+TGG | - | chr8.4:66576824-66576843 | MS.gene056800:intron | 15.0% |
!!! | ATGAATTATTGTGTAATTTT+CGG | - | chr8.4:66576901-66576920 | MS.gene056800:CDS | 15.0% |
!!! | ATTGTTCATTTTTTGTATAA+GGG | - | chr8.4:66576210-66576229 | MS.gene056800:CDS | 15.0% |
!!! | CAAATCTTATTTTAACATTA+AGG | + | chr8.4:66574450-66574469 | None:intergenic | 15.0% |
!!! | TAGATATAATTTTTAACTCA+AGG | - | chr8.4:66575827-66575846 | MS.gene056800:CDS | 15.0% |
!! | ATAAAACCATAATAAGCAAA+AGG | + | chr8.4:66574281-66574300 | None:intergenic | 20.0% |
!! | TAAAACCATAATAAGCAAAA+GGG | + | chr8.4:66574280-66574299 | None:intergenic | 20.0% |
!! | TATTAAACACATGTTTAAAG+AGG | - | chr8.4:66576588-66576607 | MS.gene056800:intron | 20.0% |
!! | TGTTAGCAATAAATAACAAT+AGG | + | chr8.4:66575456-66575475 | None:intergenic | 20.0% |
!! | TTGATATCTAATTATGAGAA+AGG | - | chr8.4:66574467-66574486 | MS.gene056800:intron | 20.0% |
!! | TTTGTTGAATTCATTAATGT+GGG | + | chr8.4:66576552-66576571 | None:intergenic | 20.0% |
!!! | AAGTAAATGTTTGATCATTT+TGG | - | chr8.4:66574749-66574768 | MS.gene056800:intron | 20.0% |
!!! | AATTTCGTCTTTTGAATATA+TGG | - | chr8.4:66575104-66575123 | MS.gene056800:intron | 20.0% |
!!! | AGTTTTAATCTTTTTCCAAT+TGG | - | chr8.4:66573805-66573824 | MS.gene056800:CDS | 20.0% |
!!! | ATTAACATTTTATATTCAGC+TGG | + | chr8.4:66575928-66575947 | None:intergenic | 20.0% |
!!! | ATTTCGTCTTTTGAATATAT+GGG | - | chr8.4:66575105-66575124 | MS.gene056800:intron | 20.0% |
!!! | ATTTTGACTTTTTGTGATTA+TGG | - | chr8.4:66574061-66574080 | MS.gene056800:intron | 20.0% |
!!! | CTGTTTTTGATTGAAAAATT+AGG | - | chr8.4:66573851-66573870 | MS.gene056800:intron | 20.0% |
!!! | GTTTTAATCTTTTTCCAATT+GGG | - | chr8.4:66573806-66573825 | MS.gene056800:CDS | 20.0% |
!!! | GTTTTTTGTTTTGATACTTT+TGG | - | chr8.4:66574890-66574909 | MS.gene056800:intron | 20.0% |
! | AGATATAAAACTAGTGTGAT+TGG | + | chr8.4:66576808-66576827 | None:intergenic | 25.0% |
! | ATACATACTTGTAGAATAGA+CGG | - | chr8.4:66575659-66575678 | MS.gene056800:intron | 25.0% |
! | ATATCTACTAACAAAGTCAA+TGG | + | chr8.4:66575814-66575833 | None:intergenic | 25.0% |
! | ATTGAACACTAAATCAGTAT+TGG | - | chr8.4:66575192-66575211 | MS.gene056800:intron | 25.0% |
! | GAAAAACATTGAAAATTGCA+AGG | + | chr8.4:66574513-66574532 | None:intergenic | 25.0% |
! | GTTCAATTATTGCACAAATT+AGG | + | chr8.4:66575179-66575198 | None:intergenic | 25.0% |
! | TAGCAATAAATAACAATAGG+TGG | + | chr8.4:66575453-66575472 | None:intergenic | 25.0% |
! | TTATTGATGAAACCTATTGA+AGG | + | chr8.4:66574626-66574645 | None:intergenic | 25.0% |
! | TTCATGTGAATGTATATAAG+AGG | - | chr8.4:66576779-66576798 | MS.gene056800:intron | 25.0% |
! | TTGAACACTAAATCAGTATT+GGG | - | chr8.4:66575193-66575212 | MS.gene056800:intron | 25.0% |
!! | AAGACATGTAACATTTTCTA+TGG | + | chr8.4:66576014-66576033 | None:intergenic | 25.0% |
!! | GAATTTTATGTCCATTTTCA+TGG | - | chr8.4:66573919-66573938 | MS.gene056800:intron | 25.0% |
!! | GTTTGTTGAATTCATTAATG+TGG | + | chr8.4:66576553-66576572 | None:intergenic | 25.0% |
!! | TGTAACATTTTCTATGGATA+AGG | + | chr8.4:66576008-66576027 | None:intergenic | 25.0% |
!! | TTGAGAAGCAACAATATTTT+TGG | - | chr8.4:66574200-66574219 | MS.gene056800:intron | 25.0% |
!!! | GCATGAGTTTTTTTTTTTGT+TGG | - | chr8.4:66574349-66574368 | MS.gene056800:intron | 25.0% |
AAAAACGTATTTCGCCAAAA+TGG | + | chr8.4:66574862-66574881 | None:intergenic | 30.0% | |
AAAGGGAAATTACTTTCACT+GGG | + | chr8.4:66573946-66573965 | None:intergenic | 30.0% | |
AACATATTGTACTTGATCTC+AGG | + | chr8.4:66576392-66576411 | None:intergenic | 30.0% | |
ACATTCTAAACAGAAAACTG+AGG | - | chr8.4:66575607-66575626 | MS.gene056800:intron | 30.0% | |
ACTTACCTAAATCTCAACTA+TGG | + | chr8.4:66576259-66576278 | None:intergenic | 30.0% | |
ACTTATGAACAAAGGGTTAA+AGG | - | chr8.4:66575058-66575077 | MS.gene056800:intron | 30.0% | |
AGAGTGAAAATCAGAAACTT+AGG | + | chr8.4:66574406-66574425 | None:intergenic | 30.0% | |
AGATCTTGTCAATGTATTTG+AGG | - | chr8.4:66574949-66574968 | MS.gene056800:intron | 30.0% | |
ATATGATTCTAGTGATGAAC+AGG | - | chr8.4:66577080-66577099 | MS.gene056800:intron | 30.0% | |
ATCAAAGTCTGTAACCAATT+GGG | - | chr8.4:66576470-66576489 | MS.gene056800:intron | 30.0% | |
CATACATCTCATCAACATTT+GGG | + | chr8.4:66574658-66574677 | None:intergenic | 30.0% | |
CATATTCAAACAAACCCAAT+TGG | + | chr8.4:66576487-66576506 | None:intergenic | 30.0% | |
TACATACTTGTAGAATAGAC+GGG | - | chr8.4:66575660-66575679 | MS.gene056800:intron | 30.0% | |
TAGGATGATGAGTGATTATA+AGG | - | chr8.4:66573870-66573889 | MS.gene056800:intron | 30.0% | |
TTAACCCTTTGTTCATAAGT+AGG | + | chr8.4:66575058-66575077 | None:intergenic | 30.0% | |
TTCATACATACACATTTCAG+TGG | + | chr8.4:66576165-66576184 | None:intergenic | 30.0% | |
! | AGGCTTATATGGTATTTTCT+AGG | - | chr8.4:66575627-66575646 | MS.gene056800:intron | 30.0% |
! | CAATTGGGTTTGTTTGAATA+TGG | - | chr8.4:66576485-66576504 | MS.gene056800:intron | 30.0% |
! | CATTTTCTATGGATAAGGAA+TGG | + | chr8.4:66576003-66576022 | None:intergenic | 30.0% |
! | GATTTCCCTTTTGCTTATTA+TGG | - | chr8.4:66574272-66574291 | MS.gene056800:intron | 30.0% |
! | TGATCTGTCTTTAACCATTT+TGG | - | chr8.4:66574845-66574864 | MS.gene056800:intron | 30.0% |
! | TGCAAGGATACTAAACATTT+TGG | + | chr8.4:66575774-66575793 | None:intergenic | 30.0% |
! | TGTAATCTTGTTTGTGAAAG+TGG | - | chr8.4:66576738-66576757 | MS.gene056800:intron | 30.0% |
! | TTTTGGATTACGACAATTTC+AGG | - | chr8.4:66574766-66574785 | MS.gene056800:intron | 30.0% |
!! | GCATTTTGACGAGATAATAA+AGG | + | chr8.4:66575290-66575309 | None:intergenic | 30.0% |
!! | GTTTTCTGTTTAGAATGTGA+TGG | + | chr8.4:66575605-66575624 | None:intergenic | 30.0% |
!!! | TGTACCATGGTTTTAATTTG+TGG | - | chr8.4:66575252-66575271 | MS.gene056800:intron | 30.0% |
AAGGTGGAAATGATTAACGA+TGG | - | chr8.4:66573889-66573908 | MS.gene056800:intron | 35.0% | |
ACAGAAAACTGAGGCTTATA+TGG | - | chr8.4:66575616-66575635 | MS.gene056800:intron | 35.0% | |
ACAGATCATTACCAAACATG+GGG | + | chr8.4:66574833-66574852 | None:intergenic | 35.0% | |
ACATGATTGCTATGTCTCTT+TGG | - | chr8.4:66575135-66575154 | MS.gene056800:intron | 35.0% | |
AGACAGATCATTACCAAACA+TGG | + | chr8.4:66574835-66574854 | None:intergenic | 35.0% | |
AGCCATAGTTCAACTCAATT+AGG | + | chr8.4:66576326-66576345 | None:intergenic | 35.0% | |
ATCTTTGCAAGAGAAGTTTG+AGG | - | chr8.4:66576437-66576456 | MS.gene056800:intron | 35.0% | |
CATCAAAGTCTGTAACCAAT+TGG | - | chr8.4:66576469-66576488 | MS.gene056800:intron | 35.0% | |
CCTATTGAAGGAGACTTATA+AGG | + | chr8.4:66574614-66574633 | None:intergenic | 35.0% | |
CCTTATAAGTCTCCTTCAAT+AGG | - | chr8.4:66574611-66574630 | MS.gene056800:intron | 35.0% | |
CTACTAACAAAGTCAATGGA+AGG | + | chr8.4:66575810-66575829 | None:intergenic | 35.0% | |
CTGGAGCGAAAAATCAAAAT+CGG | + | chr8.4:66575909-66575928 | None:intergenic | 35.0% | |
GAAAGGGAAATTACTTTCAC+TGG | + | chr8.4:66573947-66573966 | None:intergenic | 35.0% | |
GACAGATCATTACCAAACAT+GGG | + | chr8.4:66574834-66574853 | None:intergenic | 35.0% | |
GACTCTAACACTATTGATGT+GGG | - | chr8.4:66576102-66576121 | MS.gene056800:intron | 35.0% | |
GACTTATAAGGATAAGCATC+CGG | + | chr8.4:66574602-66574621 | None:intergenic | 35.0% | |
GAGATTTAGGTAAGTGTTCA+AGG | - | chr8.4:66576264-66576283 | MS.gene056800:CDS | 35.0% | |
GATGATGAGTGATTATAAGG+TGG | - | chr8.4:66573873-66573892 | MS.gene056800:intron | 35.0% | |
GATTGAACAAGGGATATGTA+TGG | + | chr8.4:66575976-66575995 | None:intergenic | 35.0% | |
GCAACCACAAATTAAAACCA+TGG | + | chr8.4:66575259-66575278 | None:intergenic | 35.0% | |
GCATACATCTCATCAACATT+TGG | + | chr8.4:66574659-66574678 | None:intergenic | 35.0% | |
GTTTAAAGAGGAGTAGATGT+TGG | - | chr8.4:66576600-66576619 | MS.gene056800:intron | 35.0% | |
TAACTCAAGGGTTACTCATA+AGG | - | chr8.4:66575840-66575859 | MS.gene056800:CDS | 35.0% | |
TACATGTCTTCTTTGCCATT+CGG | - | chr8.4:66576024-66576043 | MS.gene056800:CDS | 35.0% | |
TCAAGCCATAGTTGAGATTT+AGG | - | chr8.4:66576251-66576270 | MS.gene056800:CDS | 35.0% | |
TGAATTCATTAATGTGGGCA+TGG | + | chr8.4:66576547-66576566 | None:intergenic | 35.0% | |
TGACTCTAACACTATTGATG+TGG | - | chr8.4:66576101-66576120 | MS.gene056800:intron | 35.0% | |
TTGATGTTATCAATCAGACC+TGG | - | chr8.4:66574805-66574824 | MS.gene056800:intron | 35.0% | |
! | CAAAAGACGAAATTCTAGAG+AGG | + | chr8.4:66575098-66575117 | None:intergenic | 35.0% |
! | GAATGGACTTGATTGAACAA+GGG | + | chr8.4:66575986-66576005 | None:intergenic | 35.0% |
! | TGGTATTTTCTAGGTGCATA+TGG | - | chr8.4:66575636-66575655 | MS.gene056800:intron | 35.0% |
! | TGTTTTTCTCATCCATGTGA+TGG | - | chr8.4:66574525-66574544 | MS.gene056800:intron | 35.0% |
!! | AGGTTAGTTTCATTGATGCA+AGG | + | chr8.4:66575790-66575809 | None:intergenic | 35.0% |
!! | ATTGAGTTGAACTATGGCTA+CGG | - | chr8.4:66576327-66576346 | MS.gene056800:intron | 35.0% |
!! | CACCTAATTGAGTTGAACTA+TGG | - | chr8.4:66576321-66576340 | MS.gene056800:intron | 35.0% |
ACCAAAGTCTTGCAATTCTC+TGG | - | chr8.4:66576639-66576658 | MS.gene056800:intron | 40.0% | |
ACCAGAGAATTGCAAGACTT+TGG | + | chr8.4:66576643-66576662 | None:intergenic | 40.0% | |
ACCGACCTACTTATGAACAA+AGG | - | chr8.4:66575050-66575069 | MS.gene056800:intron | 40.0% | |
ACCTTCAAATATTGCAGTCG+CGG | - | chr8.4:66575350-66575369 | MS.gene056800:intron | 40.0% | |
AGTTGTGAGTGTCTTGTGAA+TGG | - | chr8.4:66576694-66576713 | MS.gene056800:intron | 40.0% | |
ATCACTGGATTTCTCTTCTG+TGG | + | chr8.4:66577034-66577053 | None:intergenic | 40.0% | |
ATGACTCGAAATGGAGATGA+GGG | - | chr8.4:66576514-66576533 | MS.gene056800:intron | 40.0% | |
CCCTTTGTTCATAAGTAGGT+CGG | + | chr8.4:66575054-66575073 | None:intergenic | 40.0% | |
CCGACCTACTTATGAACAAA+GGG | - | chr8.4:66575051-66575070 | MS.gene056800:intron | 40.0% | |
GAAAGTAAGAGTTGAGCTAC+CGG | - | chr8.4:66574580-66574599 | MS.gene056800:intron | 40.0% | |
GAAATCCAGTGATGAAGATG+AGG | - | chr8.4:66577041-66577060 | MS.gene056800:intron | 40.0% | |
GACCTAAATGTTAGACCTCA+GGG | - | chr8.4:66575220-66575239 | MS.gene056800:intron | 40.0% | |
GTCAAATTCAGTGACCCAAT+TGG | + | chr8.4:66573823-66573842 | None:intergenic | 40.0% | |
GTTGTGAGTGTCTTGTGAAT+GGG | - | chr8.4:66576695-66576714 | MS.gene056800:intron | 40.0% | |
TAAAGAGGAGTAGATGTTGG+TGG | - | chr8.4:66576603-66576622 | MS.gene056800:intron | 40.0% | |
TAAGTGTTCAAGGTGTGTCT+GGG | - | chr8.4:66576274-66576293 | MS.gene056800:intron | 40.0% | |
TAGCGAGAGAGAATAACCTA+GGG | + | chr8.4:66575880-66575899 | None:intergenic | 40.0% | |
TGACCTAAATGTTAGACCTC+AGG | - | chr8.4:66575219-66575238 | MS.gene056800:intron | 40.0% | |
TGATTCTAGTGATGAACAGG+TGG | - | chr8.4:66577083-66577102 | MS.gene056800:CDS | 40.0% | |
TTAGCGAGAGAGAATAACCT+AGG | + | chr8.4:66575881-66575900 | None:intergenic | 40.0% | |
TTTCACTGGGTCCATGAAAA+TGG | + | chr8.4:66573933-66573952 | None:intergenic | 40.0% | |
! | CACATGTTGTCATTTGCGAA+CGG | - | chr8.4:66575527-66575546 | MS.gene056800:intron | 40.0% |
! | GAATGTGATGGAATCACATG+AGG | + | chr8.4:66575593-66575612 | None:intergenic | 40.0% |
! | GATTACGACAATTTCAGGTC+AGG | - | chr8.4:66574771-66574790 | MS.gene056800:intron | 40.0% |
! | GGAATGGACTTGATTGAACA+AGG | + | chr8.4:66575987-66576006 | None:intergenic | 40.0% |
! | GGTTCAATCTTGTTATCCCT+AGG | - | chr8.4:66575861-66575880 | MS.gene056800:CDS | 40.0% |
! | TCTCACAGTACTCTGAAAGT+TGG | + | chr8.4:66576981-66577000 | None:intergenic | 40.0% |
! | TGCAATTTGAAACCATGGCA+TGG | - | chr8.4:66575375-66575394 | MS.gene056800:intron | 40.0% |
AAGTGTTCAAGGTGTGTCTG+GGG | - | chr8.4:66576275-66576294 | MS.gene056800:intron | 45.0% | |
AATCCATCAGACCCCTTGAA+TGG | - | chr8.4:66575001-66575020 | MS.gene056800:intron | 45.0% | |
ACACATACCAGAAGACCGAA+TGG | + | chr8.4:66576042-66576061 | None:intergenic | 45.0% | |
ATGTCAGGTCCTTATCAAGG+AGG | - | chr8.4:66574551-66574570 | MS.gene056800:intron | 45.0% | |
CACCCTGAGGTCTAACATTT+AGG | + | chr8.4:66575225-66575244 | None:intergenic | 45.0% | |
CATGACTCGAAATGGAGATG+AGG | - | chr8.4:66576513-66576532 | MS.gene056800:intron | 45.0% | |
CTAAATGTTAGACCTCAGGG+TGG | - | chr8.4:66575223-66575242 | MS.gene056800:intron | 45.0% | |
CTCATGTCAGGTCCTTATCA+AGG | - | chr8.4:66574548-66574567 | MS.gene056800:intron | 45.0% | |
GCAACTGCAATTGACTGCAT+CGG | + | chr8.4:66575315-66575334 | None:intergenic | 45.0% | |
GCTTGATACTCTACAGACAC+AGG | + | chr8.4:66576237-66576256 | None:intergenic | 45.0% | |
GTAAGTGTTCAAGGTGTGTC+TGG | - | chr8.4:66576273-66576292 | MS.gene056800:intron | 45.0% | |
TAGCTCCTCATCTTCATCAC+TGG | + | chr8.4:66577049-66577068 | None:intergenic | 45.0% | |
TATGCGAAGCCAGAAGACAT+TGG | - | chr8.4:66577003-66577022 | MS.gene056800:intron | 45.0% | |
TATGGCTACGGCTAATGACA+TGG | - | chr8.4:66576339-66576358 | MS.gene056800:intron | 45.0% | |
TCCGCGACTGCAATATTTGA+AGG | + | chr8.4:66575354-66575373 | None:intergenic | 45.0% | |
TGACTCGAAATGGAGATGAG+GGG | - | chr8.4:66576515-66576534 | MS.gene056800:intron | 45.0% | |
TGCTTCGTGTGTGCATTCAT+AGG | + | chr8.4:66576075-66576094 | None:intergenic | 45.0% | |
TGGAGTTGCATGACTCGAAA+TGG | - | chr8.4:66576505-66576524 | MS.gene056800:intron | 45.0% | |
TGTCGCCTAACTTTGCTAGT+CGG | - | chr8.4:66575745-66575764 | MS.gene056800:intron | 45.0% | |
TTCCACACACCTCCTTGATA+AGG | + | chr8.4:66574563-66574582 | None:intergenic | 45.0% | |
TTCTTTGCCATTCGGTCTTC+TGG | - | chr8.4:66576032-66576051 | MS.gene056800:CDS | 45.0% | |
TTGGGATACAGAAGGAGTTG+TGG | + | chr8.4:66574983-66575002 | None:intergenic | 45.0% | |
! | ATTCAAGGGGTCTGATGGAT+TGG | + | chr8.4:66575002-66575021 | None:intergenic | 45.0% |
! | CGACAATTTCAGGTCAGGAT+CGG | - | chr8.4:66574776-66574795 | MS.gene056800:intron | 45.0% |
! | CGGACTGCAATTTGAAACCA+TGG | - | chr8.4:66575370-66575389 | MS.gene056800:intron | 45.0% |
! | GTGGGCAGTGTCTAAAATGT+AGG | - | chr8.4:66576120-66576139 | MS.gene056800:intron | 45.0% |
!! | CTGATGGATTGGGATACAGA+AGG | + | chr8.4:66574991-66575010 | None:intergenic | 45.0% |
!! | TTCAAGGGGTCTGATGGATT+GGG | + | chr8.4:66575001-66575020 | None:intergenic | 45.0% |
!!! | AAAAAAATATTTTTTTCATA+AGG | + | chr8.4:66574002-66574021 | None:intergenic | 5.0% |
ACCTGACATGAGCCATCACA+TGG | + | chr8.4:66574540-66574559 | None:intergenic | 50.0% | |
ATGTTAGACCTCAGGGTGGT+AGG | - | chr8.4:66575227-66575246 | MS.gene056800:intron | 50.0% | |
ATTACCAAACATGGGGCTCC+AGG | + | chr8.4:66574826-66574845 | None:intergenic | 50.0% | |
CTGCATAGTAGTCCATGCCA+TGG | + | chr8.4:66575390-66575409 | None:intergenic | 50.0% | |
TCCATGTGATGGCTCATGTC+AGG | - | chr8.4:66574536-66574555 | MS.gene056800:intron | 50.0% | |
TCTAGTGATGAACAGGTGGC+TGG | - | chr8.4:66577087-66577106 | MS.gene056800:CDS | 50.0% | |
TCTCCATTCAAGGGGTCTGA+TGG | + | chr8.4:66575007-66575026 | None:intergenic | 50.0% | |
! | GTCCTTATCAAGGAGGTGTG+TGG | - | chr8.4:66574558-66574577 | MS.gene056800:intron | 50.0% |
ACCAAGCAAGCGACGAGAGA+TGG | - | chr8.4:66573729-66573748 | MS.gene056800:CDS | 55.0% | |
AGCCGCAGCTTCTCCATTCA+AGG | + | chr8.4:66575017-66575036 | None:intergenic | 55.0% | |
CCCCTTGAATGGAGAAGCTG+CGG | - | chr8.4:66575012-66575031 | MS.gene056800:intron | 55.0% | |
CCGCAGCTTCTCCATTCAAG+GGG | + | chr8.4:66575015-66575034 | None:intergenic | 55.0% | |
GCCGCAGCTTCTCCATTCAA+GGG | + | chr8.4:66575016-66575035 | None:intergenic | 55.0% | |
GGCAGCCGACTAGCAAAGTT+AGG | + | chr8.4:66575753-66575772 | None:intergenic | 55.0% | |
GTGGCAGCTCCAATGTCTTC+TGG | + | chr8.4:66577015-66577034 | None:intergenic | 55.0% | |
TCCATCTCTCGTCGCTTGCT+TGG | + | chr8.4:66573733-66573752 | None:intergenic | 55.0% | |
AGGGTGGTAGGCGTGTACCA+TGG | - | chr8.4:66575239-66575258 | MS.gene056800:intron | 60.0% | |
CAGACCTGGAGCCCCATGTT+TGG | - | chr8.4:66574819-66574838 | MS.gene056800:intron | 60.0% | |
GGTACACGCCTACCACCCTG+AGG | + | chr8.4:66575238-66575257 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.4 | gene | 66573721 | 66577125 | 66573721 | ID=MS.gene056800 |
chr8.4 | mRNA | 66573721 | 66577125 | 66573721 | ID=MS.gene056800.t1;Parent=MS.gene056800 |
chr8.4 | exon | 66577082 | 66577125 | 66577082 | ID=MS.gene056800.t1.exon1;Parent=MS.gene056800.t1 |
chr8.4 | CDS | 66577082 | 66577125 | 66577082 | ID=cds.MS.gene056800.t1;Parent=MS.gene056800.t1 |
chr8.4 | exon | 66576894 | 66576973 | 66576894 | ID=MS.gene056800.t1.exon2;Parent=MS.gene056800.t1 |
chr8.4 | CDS | 66576894 | 66576973 | 66576894 | ID=cds.MS.gene056800.t1;Parent=MS.gene056800.t1 |
chr8.4 | exon | 66576174 | 66576288 | 66576174 | ID=MS.gene056800.t1.exon3;Parent=MS.gene056800.t1 |
chr8.4 | CDS | 66576174 | 66576288 | 66576174 | ID=cds.MS.gene056800.t1;Parent=MS.gene056800.t1 |
chr8.4 | exon | 66576006 | 66576058 | 66576006 | ID=MS.gene056800.t1.exon4;Parent=MS.gene056800.t1 |
chr8.4 | CDS | 66576006 | 66576058 | 66576006 | ID=cds.MS.gene056800.t1;Parent=MS.gene056800.t1 |
chr8.4 | exon | 66575767 | 66575895 | 66575767 | ID=MS.gene056800.t1.exon5;Parent=MS.gene056800.t1 |
chr8.4 | CDS | 66575767 | 66575895 | 66575767 | ID=cds.MS.gene056800.t1;Parent=MS.gene056800.t1 |
chr8.4 | exon | 66573721 | 66573857 | 66573721 | ID=MS.gene056800.t1.exon6;Parent=MS.gene056800.t1 |
chr8.4 | CDS | 66573721 | 66573857 | 66573721 | ID=cds.MS.gene056800.t1;Parent=MS.gene056800.t1 |
Gene Sequence |
Protein sequence |