AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene40572

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene40572.t1 MTR_2g078010 98.693 153 2 0 1 153 1 153 7.31e-111 311
MS.gene40572.t1 MTR_2g078010 90.419 167 2 1 1 153 1 167 7.88e-107 301
MS.gene40572.t1 MTR_2g078010 97.887 142 3 0 1 142 1 142 2.05e-101 287
MS.gene40572.t1 MTR_2g078010 98.148 108 2 0 1 108 1 108 1.12e-75 221
MS.gene40572.t1 MTR_5g075580 49.655 145 73 0 8 152 4 148 3.47e-48 152
MS.gene40572.t1 MTR_8g071040 49.655 145 73 0 8 152 4 148 5.92e-48 152
MS.gene40572.t1 MTR_3g062450 48.966 145 74 0 8 152 4 148 1.50e-47 151
MS.gene40572.t1 MTR_7g116940 48.966 145 74 0 8 152 4 148 2.17e-47 150
MS.gene40572.t1 MTR_1g021150 48.252 143 74 0 8 150 4 146 1.22e-46 149
MS.gene40572.t1 MTR_4g073240 47.586 145 76 0 8 152 4 148 2.48e-46 148
MS.gene40572.t1 MTR_7g116940 46.711 152 74 1 8 152 4 155 1.51e-44 144
MS.gene40572.t1 MTR_5g075580 52.941 119 56 0 34 152 1 119 6.89e-42 135
MS.gene40572.t1 MTR_1g021150 50.000 124 62 0 27 150 31 154 1.02e-41 136
MS.gene40572.t1 MTR_3g098780 50.000 128 63 1 24 150 22 149 2.72e-40 134
MS.gene40572.t1 MTR_3g098780 50.000 128 63 1 24 150 46 173 4.97e-40 134
MS.gene40572.t1 MTR_4g073240 50.420 119 59 0 34 152 1 119 6.41e-40 130
MS.gene40572.t1 MTR_4g108080 40.146 137 82 0 8 144 7 143 3.15e-38 127
MS.gene40572.t1 MTR_8g468530 40.146 137 82 0 8 144 23 159 5.97e-38 127
MS.gene40572.t1 MTR_4g076200 46.094 128 69 0 8 135 35 162 1.34e-35 122
MS.gene40572.t1 MTR_5g009020 46.094 128 69 0 8 135 35 162 1.58e-35 121
MS.gene40572.t1 MTR_8g085690 39.860 143 86 0 8 150 25 167 4.77e-35 120
MS.gene40572.t1 MTR_4g076200 47.899 119 62 0 17 135 3 121 7.95e-35 118
MS.gene40572.t1 MTR_3g110110 40.411 146 83 3 9 150 7 152 1.67e-33 115
MS.gene40572.t1 MTR_1g095510 43.609 133 74 1 4 135 40 172 9.10e-32 112
MS.gene40572.t1 MTR_4g108080 42.593 108 62 0 8 115 7 114 9.38e-32 110
MS.gene40572.t1 MTR_1g095510 47.321 112 59 0 24 135 7 118 1.15e-31 110
MS.gene40572.t1 MTR_7g116940 47.170 106 56 0 8 113 4 109 9.63e-31 107
MS.gene40572.t1 MTR_7g087590 37.500 152 91 1 3 150 4 155 2.50e-28 105
MS.gene40572.t1 MTR_1g095510 44.248 113 62 1 3 114 39 151 2.33e-27 100
MS.gene40572.t1 MTR_4g108080 39.450 109 66 0 36 144 35 143 5.00e-27 99.4
MS.gene40572.t1 MTR_8g028920 38.843 121 72 2 32 150 27 147 2.51e-26 98.2
MS.gene40572.t1 MTR_4g073240 53.012 83 39 0 70 152 4 86 2.80e-26 95.1
MS.gene40572.t1 MTR_4g106690 38.843 121 72 2 32 150 27 147 9.29e-25 94.4
MS.gene40572.t1 MTR_8g098595 38.017 121 73 2 32 150 12 132 1.33e-24 93.6
MS.gene40572.t1 MTR_4g063490 33.588 131 73 2 21 137 20 150 2.31e-23 90.1
MS.gene40572.t1 MTR_5g019480 40.000 105 62 1 30 134 6 109 7.14e-22 85.5
MS.gene40572.t1 MTR_2g096690 33.858 127 70 2 20 132 19 145 8.18e-22 86.3
MS.gene40572.t1 MTR_5g019480 40.000 105 62 1 30 134 57 160 1.46e-21 86.3
MS.gene40572.t1 MTR_5g019480 40.000 105 62 1 30 134 54 157 1.49e-21 85.9
MS.gene40572.t1 MTR_8g028920 37.736 106 64 2 47 150 3 108 3.12e-21 84.3
MS.gene40572.t1 MTR_2g096690 33.071 127 70 3 20 132 19 144 1.52e-19 80.5
MS.gene40572.t1 MTR_4g094872 37.374 99 60 1 26 122 30 128 4.73e-19 79.0
MS.gene40572.t1 MTR_5g016630 28.667 150 100 2 9 151 8 157 5.23e-18 76.3
MS.gene40572.t1 MTR_8g076490 37.000 100 61 2 9 107 19 117 4.29e-15 68.6
MS.gene40572.t1 MTR_2g096690 39.474 76 45 1 20 94 19 94 1.68e-13 63.5
MS.gene40572.t1 MTR_5g021260 35.000 100 63 2 9 107 19 117 2.25e-13 63.9
MS.gene40572.t1 MTR_1g073600 33.333 72 47 1 37 107 25 96 2.77e-13 63.2
MS.gene40572.t1 MTR_4g121960 30.328 122 75 4 8 124 13 129 5.03e-12 62.4
MS.gene40572.t1 MTR_1g103520 65.217 46 11 1 57 97 47 92 3.31e-11 57.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene40572.t1 AT1G78870 99.346 153 1 0 1 153 1 153 1.44e-111 313
MS.gene40572.t1 AT1G16890 99.346 153 1 0 1 153 1 153 2.24e-111 313
MS.gene40572.t1 AT1G16890 93.210 162 2 1 1 153 1 162 9.53e-108 304
MS.gene40572.t1 AT1G16890 100.000 120 0 0 34 153 1 120 3.03e-87 250
MS.gene40572.t1 AT1G78870 99.167 120 1 0 34 153 1 120 1.21e-86 249
MS.gene40572.t1 AT1G78870 98.347 121 1 1 34 153 1 121 7.98e-85 244
MS.gene40572.t1 AT1G78870 100.000 108 0 0 1 108 1 108 4.46e-77 224
MS.gene40572.t1 AT3G08690 49.655 145 73 0 8 152 4 148 2.03e-48 153
MS.gene40572.t1 AT3G08690 49.655 145 73 0 8 152 4 148 2.03e-48 153
MS.gene40572.t1 AT5G41700 49.655 145 73 0 8 152 4 148 2.22e-48 153
MS.gene40572.t1 AT5G41700 49.655 145 73 0 8 152 4 148 2.22e-48 153
MS.gene40572.t1 AT5G41700 49.655 145 73 0 8 152 4 148 2.22e-48 153
MS.gene40572.t1 AT1G64230 48.966 145 74 0 8 152 4 148 2.42e-48 153
MS.gene40572.t1 AT1G64230 48.966 145 74 0 8 152 4 148 2.42e-48 153
MS.gene40572.t1 AT5G53300 48.966 145 74 0 8 152 4 148 6.13e-48 152
MS.gene40572.t1 AT5G53300 48.966 145 74 0 8 152 4 148 6.13e-48 152
MS.gene40572.t1 AT5G53300 48.966 145 74 0 8 152 4 148 6.13e-48 152
MS.gene40572.t1 AT4G27960 48.966 145 74 0 8 152 4 148 9.60e-48 151
MS.gene40572.t1 AT2G16740 49.650 143 72 0 8 150 4 146 1.85e-47 151
MS.gene40572.t1 AT4G27960 48.966 145 74 0 8 152 34 178 3.91e-47 151
MS.gene40572.t1 AT5G56150 48.966 145 74 0 8 152 4 148 1.59e-46 148
MS.gene40572.t1 AT5G41700 49.315 146 73 1 8 152 4 149 2.51e-46 148
MS.gene40572.t1 AT1G64230 46.104 154 74 1 8 152 4 157 2.23e-45 146
MS.gene40572.t1 AT3G08700 45.890 146 78 1 8 152 4 149 2.02e-42 138
MS.gene40572.t1 AT3G08700 45.890 146 78 1 8 152 4 149 2.02e-42 138
MS.gene40572.t1 AT1G64230 46.000 150 76 1 8 152 41 190 2.25e-42 139
MS.gene40572.t1 AT1G64230 46.000 150 76 1 8 152 41 190 2.25e-42 139
MS.gene40572.t1 AT5G50870 46.528 144 75 2 9 150 6 149 7.17e-41 135
MS.gene40572.t1 AT5G62540 43.077 130 74 0 8 137 7 136 6.25e-38 127
MS.gene40572.t1 AT5G50870 43.226 155 75 3 9 150 6 160 1.80e-37 127
MS.gene40572.t1 AT2G02760 39.416 137 83 0 8 144 7 143 1.84e-37 125
MS.gene40572.t1 AT2G02760 39.416 137 83 0 8 144 7 143 1.84e-37 125
MS.gene40572.t1 AT2G02760 39.416 137 83 0 8 144 7 143 1.84e-37 125
MS.gene40572.t1 AT2G02760 39.416 137 83 0 8 144 7 143 1.84e-37 125
MS.gene40572.t1 AT1G14400 40.769 130 77 0 8 137 7 136 2.58e-37 125
MS.gene40572.t1 AT1G14400 40.769 130 77 0 8 137 7 136 2.58e-37 125
MS.gene40572.t1 AT3G13550 40.559 143 85 0 8 150 39 181 1.06e-35 122
MS.gene40572.t1 AT3G20060 44.531 128 71 0 8 135 39 166 2.32e-35 121
MS.gene40572.t1 AT3G20060 46.218 119 64 0 17 135 3 121 2.28e-34 117
MS.gene40572.t1 AT5G25760 41.781 146 81 3 9 150 7 152 9.85e-34 116
MS.gene40572.t1 AT5G25760 41.781 146 81 3 9 150 7 152 9.85e-34 116
MS.gene40572.t1 AT1G36340 43.056 144 81 1 8 151 11 153 2.71e-32 112
MS.gene40572.t1 AT1G36340 43.056 144 81 1 8 151 11 153 2.71e-32 112
MS.gene40572.t1 AT5G41700 48.077 104 54 0 8 111 4 107 1.71e-31 110
MS.gene40572.t1 AT1G50490 44.531 128 71 0 8 135 38 165 2.14e-31 111
MS.gene40572.t1 AT5G53300 48.485 99 51 0 8 106 4 102 8.13e-31 107
MS.gene40572.t1 AT3G24515 43.038 158 77 3 6 150 7 164 1.48e-30 114
MS.gene40572.t1 AT3G13550 42.857 112 64 0 8 119 39 150 3.62e-30 107
MS.gene40572.t1 AT5G56150 48.000 100 52 0 8 107 4 103 6.67e-30 105
MS.gene40572.t1 AT3G24515 48.246 114 55 1 41 150 76 189 3.48e-28 108
MS.gene40572.t1 AT5G05080 35.294 153 95 1 2 150 3 155 1.44e-27 103
MS.gene40572.t1 AT5G05080 35.294 153 95 1 2 150 3 155 1.44e-27 103
MS.gene40572.t1 AT5G05080 35.294 153 95 1 2 150 3 155 1.44e-27 103
MS.gene40572.t1 AT5G05080 35.294 153 95 1 2 150 3 155 1.44e-27 103
MS.gene40572.t1 AT1G63800 40.496 121 70 2 32 150 12 132 2.20e-25 95.5
MS.gene40572.t1 AT1G63800 40.496 121 70 2 32 150 27 147 2.86e-25 95.5
MS.gene40572.t1 AT5G41340 40.496 121 70 2 32 150 27 147 5.72e-25 95.1
MS.gene40572.t1 AT2G46030 40.496 121 70 2 32 150 27 147 8.88e-25 94.4
MS.gene40572.t1 AT2G46030 40.496 121 70 2 32 150 27 147 8.88e-25 94.4
MS.gene40572.t1 AT3G55380 33.113 151 87 2 1 137 1 151 1.14e-24 93.6
MS.gene40572.t1 AT2G46030 40.496 121 70 2 32 150 30 150 1.39e-24 94.0
MS.gene40572.t1 AT2G46030 40.496 121 70 2 32 150 30 150 1.39e-24 94.0
MS.gene40572.t1 AT2G46030 40.496 121 70 2 32 150 99 219 5.29e-24 94.0
MS.gene40572.t1 AT5G59300 33.333 132 74 2 20 137 19 150 7.10e-23 89.0
MS.gene40572.t1 AT2G32790 42.857 126 68 2 29 152 54 177 7.62e-23 89.4
MS.gene40572.t1 AT3G46460 34.091 132 73 2 20 137 19 150 1.28e-22 88.2
MS.gene40572.t1 AT4G36800 36.508 126 79 1 9 134 34 158 6.93e-22 87.0
MS.gene40572.t1 AT4G36800 36.508 126 79 1 9 134 34 158 6.93e-22 87.0
MS.gene40572.t1 AT5G41340 40.385 104 60 2 49 150 9 112 3.02e-21 84.3
MS.gene40572.t1 AT2G18600 35.714 126 80 1 9 134 35 159 2.94e-20 82.8
MS.gene40572.t1 AT2G18600 35.714 126 80 1 9 134 35 159 2.94e-20 82.8
MS.gene40572.t1 AT3G57870 32.558 129 80 2 1 122 1 129 9.22e-19 78.2
MS.gene40572.t1 AT3G55380 27.568 185 86 3 1 137 1 185 1.87e-18 78.6
MS.gene40572.t1 AT3G46460 33.663 101 54 1 50 137 8 108 1.59e-17 73.9
MS.gene40572.t1 AT3G46460 33.663 101 54 1 50 137 8 108 1.59e-17 73.9
MS.gene40572.t1 AT1G45050 35.000 100 63 2 9 107 19 117 1.97e-14 67.0
MS.gene40572.t1 AT1G75440 34.000 100 64 2 9 107 19 117 1.09e-13 65.1
MS.gene40572.t1 AT4G36410 34.000 100 64 2 9 107 19 117 4.57e-13 63.5
MS.gene40572.t1 AT5G42990 34.000 100 64 2 9 107 19 117 6.74e-13 62.8
MS.gene40572.t1 AT3G17000 29.060 117 73 4 8 118 14 126 6.52e-11 59.3

Find 41 sgRNAs with CRISPR-Local

Find 284 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATATAATCTGGTCCACTCTT+TGG 0.343468 2.1:+22703542 None:intergenic
TTCTCAGAAAGAGGATCATC+TGG 0.366062 2.1:+22703729 None:intergenic
GCAGCCATTGGATATTCTTC+AGG 0.381683 2.1:+22705987 None:intergenic
GAAGGGGATGCACTAATTCC+AGG 0.430653 2.1:+22707335 None:intergenic
AAGCATACCTTGTCAATGTT+AGG 0.438243 2.1:+22704426 None:intergenic
CTGAGAACATTGCTAAGCAT+TGG 0.441903 2.1:-22703713 MS.gene40572:CDS
GAAATTCGATGCAGCTTGGC+AGG 0.451169 2.1:-22704347 MS.gene40572:intron
GAAAGAGGATCATCTGGGTT+TGG 0.452444 2.1:+22703735 None:intergenic
TATTTCAATGTGATGATCCT+TGG 0.456529 2.1:-22707296 MS.gene40572:CDS
ACCAAATTGTCAAGCACCAC+TGG 0.462138 2.1:+22703518 None:intergenic
AGCACCACTGGCATATAATC+TGG 0.467837 2.1:+22703530 None:intergenic
CTTCATAAGGAGACTGAGTT+GGG 0.469912 2.1:+22707273 None:intergenic
TGGAATTAGTGCATCCCCTT+CGG 0.472941 2.1:-22707333 MS.gene40572:CDS
CAGCGTTTGCTCAGTGAGCC+AGG 0.478486 2.1:-22708007 MS.gene40572:intron
GAGGCTGAGGCTGTTGAGAC+AGG 0.486241 2.1:-22703681 MS.gene40572:intron
AGTACCTTTGGAGCAGCCAT+TGG 0.489227 2.1:+22705975 None:intergenic
TTGATATTCTGAAAGATAAG+TGG 0.507902 2.1:-22704317 MS.gene40572:CDS
GGGTCATCACTACCTTCATA+AGG 0.510970 2.1:+22707260 None:intergenic
CCTTGATGATTCTTCGAGGA+AGG 0.515767 2.1:+22708457 None:intergenic
ATATCCAATGGCTGCTCCAA+AGG 0.528645 2.1:-22705979 MS.gene40572:intron
TTAGCAATGTTCTCAGAAAG+AGG 0.528946 2.1:+22703720 None:intergenic
AAAGTACAGTGCGAATCTGA+AGG 0.534958 2.1:+22704286 None:intergenic
CCTTCATAAGGAGACTGAGT+TGG 0.538189 2.1:+22707272 None:intergenic
CCAACTCAGTCTCCTTATGA+AGG 0.539979 2.1:-22707272 MS.gene40572:intron
CGAACCTTGATGATTCTTCG+AGG 0.552069 2.1:+22708453 None:intergenic
TTAAATCTGCAGCCAAAGAG+TGG 0.559027 2.1:-22703554 MS.gene40572:intron
TACCGCATGTTGTCTTCCGA+AGG 0.561290 2.1:+22707317 None:intergenic
AAGGAGACTGAGTTGGGCCA+AGG 0.563036 2.1:+22707279 None:intergenic
TTGGAAATCTAACGAGGCTG+AGG 0.570066 2.1:-22703694 MS.gene40572:CDS
TTTGCCTGAAGAATATCCAA+TGG 0.577448 2.1:-22705991 MS.gene40572:CDS
ACAGTGCGAATCTGAAGGGC+GGG 0.582860 2.1:+22704291 None:intergenic
CCTTCCTCGAAGAATCATCA+AGG 0.595281 2.1:-22708457 MS.gene40572:intron
ACCGCATGTTGTCTTCCGAA+GGG 0.605029 2.1:+22707318 None:intergenic
TCTCAGAAAGAGGATCATCT+GGG 0.624579 2.1:+22703730 None:intergenic
AAGTACAGTGCGAATCTGAA+GGG 0.628795 2.1:+22704287 None:intergenic
TACAGTGCGAATCTGAAGGG+CGG 0.640507 2.1:+22704290 None:intergenic
CCCCTTCGGAAGACAACATG+CGG 0.648296 2.1:-22707319 MS.gene40572:CDS
CCGCATGTTGTCTTCCGAAG+GGG 0.655623 2.1:+22707319 None:intergenic
TGGACCAGATTATATGCCAG+TGG 0.669843 2.1:-22703534 MS.gene40572:CDS
ATATCATCCTAACATTGACA+AGG 0.690087 2.1:-22704433 MS.gene40572:intron
TAAGCATTGGAAATCTAACG+AGG 0.750907 2.1:-22703700 MS.gene40572:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATATGATATGATAGATT+TGG - chr2.1:22707451-22707470 MS.gene40572:intron 15.0%
!! AATAAGTCAATAAATAGTTA+AGG - chr2.1:22706289-22706308 MS.gene40572:intron 15.0%
!! ATAAGTCAATAAATAGTTAA+GGG - chr2.1:22706290-22706309 MS.gene40572:intron 15.0%
!! ATATGATATGATTACAATAA+AGG + chr2.1:22704268-22704287 None:intergenic 15.0%
!! TAAAATTACATGTGAAATTA+GGG - chr2.1:22703723-22703742 MS.gene40572:CDS 15.0%
!! TAATGTATTATAGATTTGTA+TGG - chr2.1:22705533-22705552 MS.gene40572:intron 15.0%
!! TATGATATGATTACAATAAA+GGG + chr2.1:22704267-22704286 None:intergenic 15.0%
!! TATTTCAAAAAAGTTCAATT+TGG + chr2.1:22707902-22707921 None:intergenic 15.0%
!!! AAAGATTTTCTTGATAAATT+GGG - chr2.1:22707172-22707191 MS.gene40572:intron 15.0%
!!! AAATGGGATATTAATTATTT+TGG - chr2.1:22704814-22704833 MS.gene40572:intron 15.0%
!!! AATGGGATATTAATTATTTT+GGG - chr2.1:22704815-22704834 MS.gene40572:intron 15.0%
!!! GATAATAATGTAAATTTTGT+GGG - chr2.1:22708207-22708226 MS.gene40572:intron 15.0%
!!! TAGTTTTGAATTGTTTTTAT+TGG - chr2.1:22703899-22703918 MS.gene40572:intron 15.0%
!!! TGATAATAATGTAAATTTTG+TGG - chr2.1:22708206-22708225 MS.gene40572:intron 15.0%
!!! TTATTTTTTTCTTTCTTTTC+TGG - chr2.1:22707409-22707428 MS.gene40572:intron 15.0%
!!! TTTTTAAACCATAAATTATC+TGG - chr2.1:22708022-22708041 MS.gene40572:intron 15.0%
!! AAAAAAATGTTGTCAAATAG+TGG - chr2.1:22704480-22704499 MS.gene40572:intron 20.0%
!! ACAATTAAATTAAGTACCTT+TGG + chr2.1:22706038-22706057 None:intergenic 20.0%
!! ATCTTAAGAAGAAAATTGAA+AGG + chr2.1:22703573-22703592 None:intergenic 20.0%
!! GTAAAATTACATGTGAAATT+AGG - chr2.1:22703722-22703741 MS.gene40572:CDS 20.0%
!! TGTAAATAACCTTAAAATGA+CGG - chr2.1:22706374-22706393 MS.gene40572:intron 20.0%
!! TGTATATTCTCTTATGAAAA+TGG - chr2.1:22708411-22708430 MS.gene40572:intron 20.0%
!! TGTTTATCTTTGATAGAAAT+GGG - chr2.1:22704798-22704817 MS.gene40572:intron 20.0%
!!! ATAAATTTTGACTTTCTGAA+GGG - chr2.1:22705656-22705675 MS.gene40572:intron 20.0%
!!! ATGGGATATTAATTATTTTG+GGG - chr2.1:22704816-22704835 MS.gene40572:intron 20.0%
!!! GAAAGATTTTCTTGATAAAT+TGG - chr2.1:22707171-22707190 MS.gene40572:intron 20.0%
!!! GTATTTGAATTTGATTTTTG+TGG - chr2.1:22703926-22703945 MS.gene40572:intron 20.0%
!!! TATAAATTTTGACTTTCTGA+AGG - chr2.1:22705655-22705674 MS.gene40572:intron 20.0%
!!! TCATTTTCTCTAATTGTTAT+CGG + chr2.1:22704242-22704261 None:intergenic 20.0%
! AAACAATTTGATTAATGAGG+TGG - chr2.1:22705053-22705072 MS.gene40572:intron 25.0%
! AACAATTTGATTAATGAGGT+GGG - chr2.1:22705054-22705073 MS.gene40572:intron 25.0%
! AAGAGCTTGAATACTAAAAT+AGG + chr2.1:22708234-22708253 None:intergenic 25.0%
! AATACATCAACTTCATGAAA+AGG + chr2.1:22705636-22705655 None:intergenic 25.0%
! AATCTTCAAGATTAGAGAAA+CGG - chr2.1:22706749-22706768 MS.gene40572:intron 25.0%
! ATAAAGATAAAGATTGCACA+TGG - chr2.1:22706791-22706810 MS.gene40572:intron 25.0%
! ATACATTATATTTGAACTGC+AGG + chr2.1:22705706-22705725 None:intergenic 25.0%
! ATCATCAAAGAAGAAAAGAA+AGG + chr2.1:22707614-22707633 None:intergenic 25.0%
! ATCTTGAAGATTAGAATTCT+TGG + chr2.1:22706741-22706760 None:intergenic 25.0%
! CGATCATAGAAATTGAAAAA+GGG + chr2.1:22703596-22703615 None:intergenic 25.0%
! GTGTTTATCTTTGATAGAAA+TGG - chr2.1:22704797-22704816 MS.gene40572:intron 25.0%
! GTTAGTACAAGTTTGTAATT+TGG + chr2.1:22707046-22707065 None:intergenic 25.0%
! TACATTATATTTGAACTGCA+GGG + chr2.1:22705705-22705724 None:intergenic 25.0%
! TACCATATAACACGAAAATA+GGG + chr2.1:22704454-22704473 None:intergenic 25.0%
! TATTTGGACAATCTAACAAA+TGG + chr2.1:22707116-22707135 None:intergenic 25.0%
! TCAGTGATGATTACAAAATT+AGG - chr2.1:22703794-22703813 MS.gene40572:intron 25.0%
! TCGATCATAGAAATTGAAAA+AGG + chr2.1:22703597-22703616 None:intergenic 25.0%
! TCTTGAAGATTAGAATTCTT+GGG + chr2.1:22706740-22706759 None:intergenic 25.0%
! TGTAATCATATCATATGTGT+TGG - chr2.1:22704272-22704291 MS.gene40572:intron 25.0%
! TTCAAAAAAGTTCAATTTGG+AGG + chr2.1:22707899-22707918 None:intergenic 25.0%
! TTTGAAAACGACAAATAAAG+AGG + chr2.1:22706196-22706215 None:intergenic 25.0%
!! ACACAAGATTTAGAGTAATT+AGG + chr2.1:22703641-22703660 None:intergenic 25.0%
!! ATTATGTTGTCATTTCTTCT+TGG + chr2.1:22706133-22706152 None:intergenic 25.0%
!! ATTTTCTTGATAAATTGGGA+TGG - chr2.1:22707176-22707195 MS.gene40572:intron 25.0%
!! GTTGAAAGAATTTTTCATGT+TGG - chr2.1:22707949-22707968 MS.gene40572:intron 25.0%
!! TAAAGTGTTAGATGTTGAAT+CGG - chr2.1:22703822-22703841 MS.gene40572:intron 25.0%
!! TCTATTAACTACAGTTTTTC+AGG + chr2.1:22707802-22707821 None:intergenic 25.0%
!! TCTGTGTTGTGATATTATTT+TGG - chr2.1:22706074-22706093 MS.gene40572:intron 25.0%
!! TGAGATTTCTTTCTTTTATG+AGG + chr2.1:22705924-22705943 None:intergenic 25.0%
!! TGTAATTTGGTAAGTTTGTT+AGG + chr2.1:22707033-22707052 None:intergenic 25.0%
!! TTGATATTCTGAAAGATAAG+TGG - chr2.1:22707681-22707700 MS.gene40572:intron 25.0%
!!! ACTCTAATCTTTGTTATTGT+GGG - chr2.1:22705470-22705489 MS.gene40572:intron 25.0%
!!! ATAGTGTCTCATTTTAACTT+GGG - chr2.1:22705724-22705743 MS.gene40572:intron 25.0%
!!! CAGTAAATTGTTACTTTTGA+CGG + chr2.1:22706340-22706359 None:intergenic 25.0%
!!! GTAGATTGATTTTTTTTCAG+TGG - chr2.1:22703745-22703764 MS.gene40572:CDS 25.0%
!!! TACTCTAATCTTTGTTATTG+TGG - chr2.1:22705469-22705488 MS.gene40572:intron 25.0%
!!! TATAGTGTCTCATTTTAACT+TGG - chr2.1:22705723-22705742 MS.gene40572:intron 25.0%
!!! TCATGTTGGTAAAGTTTTAT+GGG - chr2.1:22707963-22707982 MS.gene40572:intron 25.0%
!!! TGTGTGGTTTTTATTTTTTG+TGG - chr2.1:22704078-22704097 MS.gene40572:intron 25.0%
!!! TTCATGTTGGTAAAGTTTTA+TGG - chr2.1:22707962-22707981 MS.gene40572:intron 25.0%
AAAACTGTAGTTAACTCAAG+TGG - chr2.1:22707864-22707883 MS.gene40572:intron 30.0%
AAAATTAACCAGCTGTGTAT+TGG - chr2.1:22708169-22708188 MS.gene40572:intron 30.0%
AAAGAAGAAAAGAAAGGCAA+GGG + chr2.1:22707608-22707627 None:intergenic 30.0%
AACACAAAATACGCATTTCA+AGG + chr2.1:22704782-22704801 None:intergenic 30.0%
AACATAAATCATACACACCA+AGG + chr2.1:22704372-22704391 None:intergenic 30.0%
AACTTCATGAAAAGGAAAAG+TGG + chr2.1:22705628-22705647 None:intergenic 30.0%
AATAATGCTCAATTTCTACG+TGG - chr2.1:22707204-22707223 MS.gene40572:intron 30.0%
AATTTGATTCATGTGCGATA+AGG - chr2.1:22704143-22704162 MS.gene40572:intron 30.0%
AGAAGAGCTAATAAGTTACT+GGG - chr2.1:22705425-22705444 MS.gene40572:intron 30.0%
AGCTAAAAAAATAGCTTCTC+CGG - chr2.1:22706707-22706726 MS.gene40572:intron 30.0%
AGTTAATCCACTAGAGTAAA+AGG + chr2.1:22707758-22707777 None:intergenic 30.0%
AGTTCAAGAAGATGTATACA+GGG + chr2.1:22705187-22705206 None:intergenic 30.0%
ATAAACAATCCACAATTCTG+AGG + chr2.1:22707390-22707409 None:intergenic 30.0%
ATATCATCCTAACATTGACA+AGG - chr2.1:22707565-22707584 MS.gene40572:intron 30.0%
ATCTTCAAGATTAGAGAAAC+GGG - chr2.1:22706750-22706769 MS.gene40572:intron 30.0%
ATTGAAAGTGAAGATACAAC+AGG - chr2.1:22706842-22706861 MS.gene40572:intron 30.0%
ATTGTGACTAGAGAATTATC+TGG + chr2.1:22706921-22706940 None:intergenic 30.0%
CAGAAATCAAAAGTAAGATC+CGG + chr2.1:22708101-22708120 None:intergenic 30.0%
CGTCAAAAGTAACAATTTAC+TGG - chr2.1:22706338-22706357 MS.gene40572:intron 30.0%
CTACCATATAACACGAAAAT+AGG + chr2.1:22704455-22704474 None:intergenic 30.0%
GACTTGGAAATACATTTGTA+TGG - chr2.1:22705750-22705769 MS.gene40572:intron 30.0%
GATCGATGTCAAACTTATAA+AGG - chr2.1:22706439-22706458 MS.gene40572:intron 30.0%
GCAGTGAATTAGAAATATCA+TGG + chr2.1:22704942-22704961 None:intergenic 30.0%
GCATTCAACCAGATAATTTA+TGG + chr2.1:22708033-22708052 None:intergenic 30.0%
GGAAATACATTTGTATGGAA+AGG - chr2.1:22705755-22705774 MS.gene40572:intron 30.0%
GGCAAACAATTTGATTAATG+AGG - chr2.1:22705050-22705069 MS.gene40572:intron 30.0%
GGTAAAAATATATAACGCCT+AGG + chr2.1:22705267-22705286 None:intergenic 30.0%
GTCTTTAAATAGCCATCAAT+CGG + chr2.1:22706973-22706992 None:intergenic 30.0%
GTTGAATGCATAATTGATTG+TGG - chr2.1:22708044-22708063 MS.gene40572:intron 30.0%
TAAACAATCCACAATTCTGA+GGG + chr2.1:22707389-22707408 None:intergenic 30.0%
TAAACACATGATAAGAAGAC+AGG + chr2.1:22705156-22705175 None:intergenic 30.0%
TAACAATTTACTGGTCCTAT+TGG - chr2.1:22706347-22706366 MS.gene40572:intron 30.0%
TAGAAGAGCTAATAAGTTAC+TGG - chr2.1:22705424-22705443 MS.gene40572:intron 30.0%
TAGTTCAAGAAGATGTATAC+AGG + chr2.1:22705188-22705207 None:intergenic 30.0%
TATTTCAATGTGATGATCCT+TGG - chr2.1:22704702-22704721 MS.gene40572:intron 30.0%
TCACCTGTAAACTTAGAAAA+AGG - chr2.1:22706165-22706184 MS.gene40572:intron 30.0%
! ACTTCTATGATCATTTCTAG+TGG - chr2.1:22705323-22705342 MS.gene40572:intron 30.0%
! ATCATAGAAGTATACACACA+TGG + chr2.1:22705314-22705333 None:intergenic 30.0%
! ATCCCTATTTTCGTGTTATA+TGG - chr2.1:22704449-22704468 MS.gene40572:CDS 30.0%
! ATCCTGTTAATAATTTTGCG+AGG - chr2.1:22705029-22705048 MS.gene40572:intron 30.0%
! ATTTTCACCTTTTACTCTAG+TGG - chr2.1:22707748-22707767 MS.gene40572:intron 30.0%
! CAACCTTTTTCTAAGTTTAC+AGG + chr2.1:22706171-22706190 None:intergenic 30.0%
! GCTTCTCTGATCATATTTTA+GGG - chr2.1:22705825-22705844 MS.gene40572:intron 30.0%
! TCATAGAAGTATACACACAT+GGG + chr2.1:22705313-22705332 None:intergenic 30.0%
! TGCTTCTCTGATCATATTTT+AGG - chr2.1:22705824-22705843 MS.gene40572:intron 30.0%
! TTTCTCGTATGTAACTCTTT+TGG - chr2.1:22705363-22705382 MS.gene40572:intron 30.0%
! TTTCTTTCTTTTATGAGGAG+AGG + chr2.1:22705919-22705938 None:intergenic 30.0%
!! AAGTTTTATGGGAAAACAGA+TGG - chr2.1:22707974-22707993 MS.gene40572:intron 30.0%
!! AATTTGGTAAGTTTGTTAGG+TGG + chr2.1:22707030-22707049 None:intergenic 30.0%
!! AGTTAAGGGTATCATAGAAA+AGG - chr2.1:22706304-22706323 MS.gene40572:intron 30.0%
!! CTATTATGCAGACTTGTTTT+GGG - chr2.1:22704882-22704901 MS.gene40572:intron 30.0%
!! TCTATTATGCAGACTTGTTT+TGG - chr2.1:22704881-22704900 MS.gene40572:intron 30.0%
!! TTCTTTGAAGTTCGTTATCT+TGG - chr2.1:22705210-22705229 MS.gene40572:intron 30.0%
!!! AGTGTTTTGTTTCCATTACT+AGG - chr2.1:22705960-22705979 MS.gene40572:intron 30.0%
!!! CAGTTTTTCAGGAAATGAAT+TGG + chr2.1:22707791-22707810 None:intergenic 30.0%
!!! GTGTTTTGTTTCCATTACTA+GGG - chr2.1:22705961-22705980 MS.gene40572:intron 30.0%
!!! GTTGTTAAGAGTTGCTATTT+TGG + chr2.1:22707008-22707027 None:intergenic 30.0%
!!! TCATATTTTAGGGTTTGGAA+AGG - chr2.1:22705835-22705854 MS.gene40572:intron 30.0%
!!! TCTGATCATATTTTAGGGTT+TGG - chr2.1:22705830-22705849 MS.gene40572:intron 30.0%
!!! TGTTTTGTTTCCATTACTAG+GGG - chr2.1:22705962-22705981 MS.gene40572:intron 30.0%
AAAAAATAGCTTCTCCGGTT+AGG - chr2.1:22706712-22706731 MS.gene40572:intron 35.0%
AAGCATACCTTGTCAATGTT+AGG + chr2.1:22707575-22707594 None:intergenic 35.0%
AAGTTACTGGGTCGAATAAA+TGG - chr2.1:22705437-22705456 MS.gene40572:intron 35.0%
ACACATACTGTGACTCTATT+TGG + chr2.1:22707132-22707151 None:intergenic 35.0%
AGGTGTAAAACCAAGTTGTT+AGG + chr2.1:22704762-22704781 None:intergenic 35.0%
AGTGTTTCTTTGATCTCTTC+AGG - chr2.1:22703963-22703982 MS.gene40572:intron 35.0%
ATATAATCTGGTCCACTCTT+TGG + chr2.1:22708459-22708478 None:intergenic 35.0%
ATGATAACCTTACACACCAA+AGG - chr2.1:22706880-22706899 MS.gene40572:intron 35.0%
ATTTACGAAAGAGGTCTAGT+AGG - chr2.1:22707319-22707338 MS.gene40572:CDS 35.0%
CAAAGAAGAAAAGAAAGGCA+AGG + chr2.1:22707609-22707628 None:intergenic 35.0%
CAACACAGCAAAACAAAACA+AGG + chr2.1:22704613-22704632 None:intergenic 35.0%
CATTATATCCAATACACAGC+TGG + chr2.1:22708180-22708199 None:intergenic 35.0%
CTAGGTTCAGATGCATATAA+GGG + chr2.1:22705249-22705268 None:intergenic 35.0%
CTTACTCAATTTGTATGCGA+AGG - chr2.1:22708070-22708089 MS.gene40572:intron 35.0%
CTTGCATATACGTAACATTG+TGG - chr2.1:22708128-22708147 MS.gene40572:intron 35.0%
GCTTCATAGGGTAAAATTCA+AGG + chr2.1:22704198-22704217 None:intergenic 35.0%
GGTGTAAAACCAAGTTGTTA+GGG + chr2.1:22704761-22704780 None:intergenic 35.0%
GGTTATTTACACATGCCAAT+AGG + chr2.1:22706365-22706384 None:intergenic 35.0%
GTATGAAATGAGTGTTCCTT+TGG + chr2.1:22706899-22706918 None:intergenic 35.0%
GTCAAACTTATAAAGGCCAT+GGG - chr2.1:22706446-22706465 MS.gene40572:intron 35.0%
GTTCAAGAAGATGTATACAG+GGG + chr2.1:22705186-22705205 None:intergenic 35.0%
TACGTAACATTGTGGAAAGT+TGG - chr2.1:22708136-22708155 MS.gene40572:intron 35.0%
TCTATAGAGCTATATCACAG+TGG - chr2.1:22704415-22704434 MS.gene40572:intron 35.0%
TGCCTCGCAAAATTATTAAC+AGG + chr2.1:22705034-22705053 None:intergenic 35.0%
TGTATGGAAATTGATGCATG+AGG - chr2.1:22705549-22705568 MS.gene40572:intron 35.0%
TGTCAAACTTATAAAGGCCA+TGG - chr2.1:22706445-22706464 MS.gene40572:intron 35.0%
TTAGCAATGTTCTCAGAAAG+AGG + chr2.1:22708281-22708300 None:intergenic 35.0%
TTTGCCTGAAGAATATCCAA+TGG - chr2.1:22706007-22706026 MS.gene40572:CDS 35.0%
! AAATAACGGTTTGTTCAGTG+CGG + chr2.1:22704552-22704571 None:intergenic 35.0%
! AACAACTAGCTTGACTATAC+TGG - chr2.1:22705873-22705892 MS.gene40572:intron 35.0%
! GTCTTTTGCAAGATACGTTA+TGG - chr2.1:22704117-22704136 MS.gene40572:intron 35.0%
! GTGCTTCTTAGATTTTACCT+TGG - chr2.1:22704352-22704371 MS.gene40572:intron 35.0%
! TTTCTTTTATGAGGAGAGGT+AGG + chr2.1:22705915-22705934 None:intergenic 35.0%
!! ATTGGAAAGTGTTTGTTGTG+TGG - chr2.1:22704062-22704081 MS.gene40572:intron 35.0%
!! TAAGCATTGGAAATCTAACG+AGG - chr2.1:22708298-22708317 MS.gene40572:intron 35.0%
!! TCTCTTTAGCCGTCATTTTA+AGG + chr2.1:22706386-22706405 None:intergenic 35.0%
!!! ATTTTAACTTGGGTGAGACT+TGG - chr2.1:22705734-22705753 MS.gene40572:intron 35.0%
!!! CTAGTGGATTAACTTTTTGC+TGG - chr2.1:22707764-22707783 MS.gene40572:intron 35.0%
!!! GTTTTGGGAATGATTCTGAA+AGG - chr2.1:22704897-22704916 MS.gene40572:intron 35.0%
!!! GTTTTGTTTCCATTACTAGG+GGG - chr2.1:22705963-22705982 MS.gene40572:intron 35.0%
AAAGTACAGTGCGAATCTGA+AGG + chr2.1:22707715-22707734 None:intergenic 40.0%
AAGTACAGTGCGAATCTGAA+GGG + chr2.1:22707714-22707733 None:intergenic 40.0%
ACAGCTATCGTGTATCTGAT+AGG - chr2.1:22707289-22707308 MS.gene40572:CDS 40.0%
ACGACTGTGACATGTACATA+TGG + chr2.1:22705288-22705307 None:intergenic 40.0%
ACTATGCAGCAATGGAATAG+CGG + chr2.1:22704514-22704533 None:intergenic 40.0%
AGAATTCTTGGGTTCCTAAC+CGG + chr2.1:22706729-22706748 None:intergenic 40.0%
AGCTATCGTGTATCTGATAG+GGG - chr2.1:22707291-22707310 MS.gene40572:CDS 40.0%
AGTTGAAATTCGATGCAGCT+TGG - chr2.1:22707647-22707666 MS.gene40572:intron 40.0%
CAGCTATCGTGTATCTGATA+GGG - chr2.1:22707290-22707309 MS.gene40572:CDS 40.0%
CATTACTACTTCCAGGGTTT+AGG - chr2.1:22707255-22707274 MS.gene40572:intron 40.0%
CCTAGGTTCAGATGCATATA+AGG + chr2.1:22705250-22705269 None:intergenic 40.0%
CCTCTGCAGTGAATAGTTAA+GGG + chr2.1:22706256-22706275 None:intergenic 40.0%
CCTTAACTATTCACTGCAGA+GGG - chr2.1:22706254-22706273 MS.gene40572:intron 40.0%
CCTTATATGCATCTGAACCT+AGG - chr2.1:22705247-22705266 MS.gene40572:intron 40.0%
CTAAACCCTGGAAGTAGTAA+TGG + chr2.1:22707257-22707276 None:intergenic 40.0%
CTGAGAACATTGCTAAGCAT+TGG - chr2.1:22708285-22708304 MS.gene40572:intron 40.0%
CTTCATAAGGAGACTGAGTT+GGG + chr2.1:22704728-22704747 None:intergenic 40.0%
GAAACCTTCTACACTACAGA+AGG + chr2.1:22704033-22704052 None:intergenic 40.0%
GAAATTCCACTATGCAGCAA+TGG + chr2.1:22704522-22704541 None:intergenic 40.0%
GAAGGTTTCACTCGGTTAAT+TGG - chr2.1:22704044-22704063 MS.gene40572:intron 40.0%
GCATATAAGGGCTAACAATG+TGG + chr2.1:22705237-22705256 None:intergenic 40.0%
GGAAATTGATGCATGAGGTA+TGG - chr2.1:22705554-22705573 MS.gene40572:intron 40.0%
GGACGAGAATAAACAATACC+TGG + chr2.1:22704012-22704031 None:intergenic 40.0%
GGGGTTTACATTTACGAAAG+AGG - chr2.1:22707310-22707329 MS.gene40572:CDS 40.0%
GTAGTGTAGAAGGTTTCACT+CGG - chr2.1:22704036-22704055 MS.gene40572:intron 40.0%
GTCATTTCTTCTTGGTAGAC+AGG + chr2.1:22706125-22706144 None:intergenic 40.0%
TAGTGATGACCCTAACAACT+TGG - chr2.1:22704749-22704768 MS.gene40572:intron 40.0%
TCTCAGAAAGAGGATCATCT+GGG + chr2.1:22708271-22708290 None:intergenic 40.0%
TGAAGCCATTACTACTTCCA+GGG - chr2.1:22707249-22707268 MS.gene40572:intron 40.0%
TTAAATCTGCAGCCAAAGAG+TGG - chr2.1:22708444-22708463 MS.gene40572:intron 40.0%
TTACAGAATATCTCGTCCCA+TGG + chr2.1:22706465-22706484 None:intergenic 40.0%
TTCAAAGGGGGAGATATGAA+GGG + chr2.1:22706538-22706557 None:intergenic 40.0%
TTCTCAGAAAGAGGATCATC+TGG + chr2.1:22708272-22708291 None:intergenic 40.0%
TTGAAAACTCCCCCTAGTAA+TGG + chr2.1:22705975-22705994 None:intergenic 40.0%
TTGAAGCCATTACTACTTCC+AGG - chr2.1:22707248-22707267 MS.gene40572:intron 40.0%
TTTCAAAGGGGGAGATATGA+AGG + chr2.1:22706539-22706558 None:intergenic 40.0%
! AGATTCGCACTGTACTTTTG+AGG - chr2.1:22707717-22707736 MS.gene40572:intron 40.0%
! AGTGTTTGACCCAGTCTTTT+TGG + chr2.1:22705393-22705412 None:intergenic 40.0%
! TAAGAAGCACAAATACCCCT+CGG + chr2.1:22704342-22704361 None:intergenic 40.0%
! TTGGTTCGTATCAGAACGAT+AGG - chr2.1:22704291-22704310 MS.gene40572:CDS 40.0%
! TTTGGTGCACCAAAAAGACT+GGG - chr2.1:22705381-22705400 MS.gene40572:intron 40.0%
! TTTTTGTCAAGAACCTGACC+TGG + chr2.1:22707544-22707563 None:intergenic 40.0%
!! TTTTGGTGCACCAAAAAGAC+TGG - chr2.1:22705380-22705399 MS.gene40572:intron 40.0%
AAATAGCCATCAATCGGCAG+AGG + chr2.1:22706967-22706986 None:intergenic 45.0%
AATAGCCATCAATCGGCAGA+GGG + chr2.1:22706966-22706985 None:intergenic 45.0%
AGCACCACTGGCATATAATC+TGG + chr2.1:22708471-22708490 None:intergenic 45.0%
ATATCCAATGGCTGCTCCAA+AGG - chr2.1:22706019-22706038 MS.gene40572:CDS 45.0%
CCAACTCAGTCTCCTTATGA+AGG - chr2.1:22704726-22704745 MS.gene40572:intron 45.0%
CCCTCTGCAGTGAATAGTTA+AGG + chr2.1:22706257-22706276 None:intergenic 45.0%
CCCTTAACTATTCACTGCAG+AGG - chr2.1:22706253-22706272 MS.gene40572:intron 45.0%
CCTTCATAAGGAGACTGAGT+TGG + chr2.1:22704729-22704748 None:intergenic 45.0%
CCTTCCTCGAAGAATCATCA+AGG - chr2.1:22703541-22703560 MS.gene40572:CDS 45.0%
CTCGCTGCATCAGTTTCAAA+GGG + chr2.1:22706552-22706571 None:intergenic 45.0%
CTGCAGATCACGGGAAATAA+CGG + chr2.1:22704566-22704585 None:intergenic 45.0%
CTTCGTGTCTGTGCTTCATA+GGG + chr2.1:22704210-22704229 None:intergenic 45.0%
GAAACTGATGCAGCGAGAAA+TGG - chr2.1:22706555-22706574 MS.gene40572:intron 45.0%
GAAAGAGGATCATCTGGGTT+TGG + chr2.1:22708266-22708285 None:intergenic 45.0%
GAGGTGGGCACAAGAATATT+TGG - chr2.1:22705069-22705088 MS.gene40572:intron 45.0%
GATTCATGTGCGATAAGGCT+TGG - chr2.1:22704148-22704167 MS.gene40572:intron 45.0%
GCAGCCATTGGATATTCTTC+AGG + chr2.1:22706014-22706033 None:intergenic 45.0%
GCTATTCCATTGCTGCATAG+TGG - chr2.1:22704513-22704532 MS.gene40572:intron 45.0%
GCTCAATTTCTACGTGGTCT+GGG - chr2.1:22707210-22707229 MS.gene40572:intron 45.0%
GGGTCATCACTACCTTCATA+AGG + chr2.1:22704741-22704760 None:intergenic 45.0%
TACGAAAGAGGTCTAGTAGG+AGG - chr2.1:22707322-22707341 MS.gene40572:CDS 45.0%
TCGCTGCATCAGTTTCAAAG+GGG + chr2.1:22706551-22706570 None:intergenic 45.0%
TCGTCCTTCTGTAGTGTAGA+AGG - chr2.1:22704026-22704045 MS.gene40572:intron 45.0%
TCTCGCTGCATCAGTTTCAA+AGG + chr2.1:22706553-22706572 None:intergenic 45.0%
TCTTCGTGTCTGTGCTTCAT+AGG + chr2.1:22704211-22704230 None:intergenic 45.0%
TGCTCAATTTCTACGTGGTC+TGG - chr2.1:22707209-22707228 MS.gene40572:intron 45.0%
TGGAATTAGTGCATCCCCTT+CGG - chr2.1:22704665-22704684 MS.gene40572:intron 45.0%
TGGACCAGATTATATGCCAG+TGG - chr2.1:22708464-22708483 MS.gene40572:CDS 45.0%
TTCACTGCAGAGGGAGAAAT+AGG - chr2.1:22706263-22706282 MS.gene40572:intron 45.0%
TTGGAAATCTAACGAGGCTG+AGG - chr2.1:22708304-22708323 MS.gene40572:intron 45.0%
TTTGTATGCGAAGGTTCAGC+CGG - chr2.1:22708079-22708098 MS.gene40572:intron 45.0%
! ACAATCCACAATTCTGAGGG+AGG + chr2.1:22707386-22707405 None:intergenic 45.0%
! CCTTGATGATTCTTCGAGGA+AGG + chr2.1:22703544-22703563 None:intergenic 45.0%
! CGAACCTTGATGATTCTTCG+AGG + chr2.1:22703548-22703567 None:intergenic 45.0%
! GAGTGTTCCTTTGGTGTGTA+AGG + chr2.1:22706890-22706909 None:intergenic 45.0%
!!! TCTTTTTATTTTATTTTTTA+AGG - chr2.1:22707346-22707365 MS.gene40572:intron 5.0%
AACCTGACCTGGAAGAAGCA+AGG + chr2.1:22707533-22707552 None:intergenic 50.0%
AACGATAGGTTTCCGACACC+GGG - chr2.1:22704305-22704324 MS.gene40572:CDS 50.0%
ACCGCATGTTGTCTTCCGAA+GGG + chr2.1:22704683-22704702 None:intergenic 50.0%
ACTGCAGAGGGAGAAATAGG+TGG - chr2.1:22706266-22706285 MS.gene40572:intron 50.0%
ATAGCCATCAATCGGCAGAG+GGG + chr2.1:22706965-22706984 None:intergenic 50.0%
CATGAGGTATGGCACTTGGT+TGG - chr2.1:22705565-22705584 MS.gene40572:intron 50.0%
CGCTGCATCAGTTTCAAAGG+GGG + chr2.1:22706550-22706569 None:intergenic 50.0%
GAAATTCGATGCAGCTTGGC+AGG - chr2.1:22707651-22707670 MS.gene40572:intron 50.0%
GAACGATAGGTTTCCGACAC+CGG - chr2.1:22704304-22704323 MS.gene40572:CDS 50.0%
GAAGGGGATGCACTAATTCC+AGG + chr2.1:22704666-22704685 None:intergenic 50.0%
GATGCATGAGGTATGGCACT+TGG - chr2.1:22705561-22705580 MS.gene40572:intron 50.0%
GTATGGCACTTGGTTGGAGT+GGG - chr2.1:22705571-22705590 MS.gene40572:intron 50.0%
GTGCTGTCAACTGCAGATCA+CGG + chr2.1:22704576-22704595 None:intergenic 50.0%
TACAGTGCGAATCTGAAGGG+CGG + chr2.1:22707711-22707730 None:intergenic 50.0%
TACCGCATGTTGTCTTCCGA+AGG + chr2.1:22704684-22704703 None:intergenic 50.0%
TCATGCCTCCCTCAGAATTG+TGG - chr2.1:22707378-22707397 MS.gene40572:intron 50.0%
TGCTGTCAACTGCAGATCAC+GGG + chr2.1:22704575-22704594 None:intergenic 50.0%
! GACTGTCGTTTCCTAAACCC+TGG + chr2.1:22707269-22707288 None:intergenic 50.0%
!! AGTACCTTTGGAGCAGCCAT+TGG + chr2.1:22706026-22706045 None:intergenic 50.0%
ACAGTGCGAATCTGAAGGGC+GGG + chr2.1:22707710-22707729 None:intergenic 55.0%
AGGGGGAGATATGAAGGGCA+AGG + chr2.1:22706533-22706552 None:intergenic 55.0%
CCCCTTCGGAAGACAACATG+CGG - chr2.1:22704679-22704698 MS.gene40572:intron 55.0%
CCGCATGTTGTCTTCCGAAG+GGG + chr2.1:22704682-22704701 None:intergenic 55.0%
GATTAAGCGTGTCCCGGTGT+CGG + chr2.1:22704320-22704339 None:intergenic 55.0%
GGTATGGCACTTGGTTGGAG+TGG - chr2.1:22705570-22705589 MS.gene40572:intron 55.0%
GTTTGTTCAGTGCGGATCGC+AGG + chr2.1:22704544-22704563 None:intergenic 55.0%
TGCCTTGCTTCTTCCAGGTC+AGG - chr2.1:22707528-22707547 MS.gene40572:intron 55.0%
! AAGGAGACTGAGTTGGGCCA+AGG + chr2.1:22704722-22704741 None:intergenic 55.0%
! CTTTCCCCTCTGCCGATTGA+TGG - chr2.1:22706958-22706977 MS.gene40572:intron 55.0%
! TGATCTGATGATGCAGCGCC+TGG - chr2.1:22704645-22704664 MS.gene40572:intron 55.0%
ACCGGGACACGCTTAATCCG+AGG - chr2.1:22704322-22704341 MS.gene40572:CDS 60.0%
CAGCGTTTGCTCAGTGAGCC+AGG - chr2.1:22703991-22704010 MS.gene40572:intron 60.0%
CCCTCGGATTAAGCGTGTCC+CGG + chr2.1:22704326-22704345 None:intergenic 60.0%
CCGGGACACGCTTAATCCGA+GGG - chr2.1:22704323-22704342 MS.gene40572:CDS 60.0%
CGGGACACGCTTAATCCGAG+GGG - chr2.1:22704324-22704343 MS.gene40572:CDS 60.0%
GAGGCTGAGGCTGTTGAGAC+AGG - chr2.1:22708317-22708336 MS.gene40572:intron 60.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 22703527 22708493 22703527 ID=MS.gene40572
chr2.1 mRNA 22703527 22708493 22703527 ID=MS.gene40572.t1;Parent=MS.gene40572
chr2.1 exon 22708458 22708493 22708458 ID=MS.gene40572.t1.exon1;Parent=MS.gene40572.t1
chr2.1 CDS 22708458 22708493 22708458 ID=cds.MS.gene40572.t1;Parent=MS.gene40572.t1
chr2.1 exon 22708008 22708035 22708008 ID=MS.gene40572.t1.exon2;Parent=MS.gene40572.t1
chr2.1 CDS 22708008 22708035 22708008 ID=cds.MS.gene40572.t1;Parent=MS.gene40572.t1
chr2.1 exon 22707273 22707359 22707273 ID=MS.gene40572.t1.exon3;Parent=MS.gene40572.t1
chr2.1 CDS 22707273 22707359 22707273 ID=cds.MS.gene40572.t1;Parent=MS.gene40572.t1
chr2.1 exon 22705980 22706038 22705980 ID=MS.gene40572.t1.exon4;Parent=MS.gene40572.t1
chr2.1 CDS 22705980 22706038 22705980 ID=cds.MS.gene40572.t1;Parent=MS.gene40572.t1
chr2.1 exon 22704434 22704475 22704434 ID=MS.gene40572.t1.exon5;Parent=MS.gene40572.t1
chr2.1 CDS 22704434 22704475 22704434 ID=cds.MS.gene40572.t1;Parent=MS.gene40572.t1
chr2.1 exon 22704282 22704355 22704282 ID=MS.gene40572.t1.exon6;Parent=MS.gene40572.t1
chr2.1 CDS 22704282 22704355 22704282 ID=cds.MS.gene40572.t1;Parent=MS.gene40572.t1
chr2.1 exon 22703682 22703779 22703682 ID=MS.gene40572.t1.exon7;Parent=MS.gene40572.t1
chr2.1 CDS 22703682 22703779 22703682 ID=cds.MS.gene40572.t1;Parent=MS.gene40572.t1
chr2.1 exon 22703527 22703564 22703527 ID=MS.gene40572.t1.exon8;Parent=MS.gene40572.t1
chr2.1 CDS 22703527 22703564 22703527 ID=cds.MS.gene40572.t1;Parent=MS.gene40572.t1
Gene Sequence

>MS.gene40572

ATGGCTAACAGTAACCTTCCTCGAAGAATCATCAAGGTTCGTTCCTTTCAATTTTCTTCTTAAGATCCCTTTTTCAATTTCTATGATCGATTCGTTTTATCGATTTCTAAACCTAATTACTCTAAATCTTGTGTTTATTGTGTAACTTTTTCTTTCGATTATTGTTTATCACGTTGATTATTAGCTTGATTGAACGTAAAATTACATGTGAAATTAGGGTAGATTGATTTTTTTTCAGTGGAACTAGCTTAATTAATTAGTTTAATTTCAGTGATGATTACAAAATTAGGAAAATTAAAGTGTTAGATGTTGAATCGGTGATTCAACTTTTTTTTTTCTTTTTCTGATTTGATCTTTGTTGATGTTGAATTTTAGTTTTGAATTGTTTTTATTGGTTCTGTATTTGAATTTGATTTTTGTGGATGTTTTGATAACTAGTGTTTCTTTGATCTCTTCAGGAAACACAGCGTTTGCTCAGTGAGCCAGGTATTGTTTATTCTCGTCCTTCTGTAGTGTAGAAGGTTTCACTCGGTTAATTGGAAAGTGTTTGTTGTGTGGTTTTTATTTTTTGTGGTTTTTGTTTTAGTATAGTCTTTTGCAAGATACGTTATGGCGTAATTTGATTCATGTGCGATAAGGCTTGGTTGTTTTTGTTATTTTCTAAGATACCTTGAATTTTACCCTATGAAGCACAGACACGAAGACACAGACACCGATAACAATTAGAGAAAATGACACCCTTTATTGTAATCATATCATATGTGTTGGTTCGTATCAGAACGATAGGTTTCCGACACCGGGACACGCTTAATCCGAGGGGTATTTGTGCTTCTTAGATTTTACCTTGGTGTGTATGATTTATGTTAAATCAGTGTTGTTAAATAGCTGTCTATAGAGCTATATCACAGTGGAAATTGAATAAATCCCTATTTTCGTGTTATATGGTAGTTACGAAAAAAATGTTGTCAAATAGTGGCTACAGCGCCGCTATTCCATTGCTGCATAGTGGAATTTCCTGCGATCCGCACTGAACAAACCGTTATTTCCCGTGATCTGCAGTTGACAGCACTGTGCTAAATGTTTCCTTGTTTTGTTTTGCTGTGTTGATTTATAATATTTGATCTGATGATGCAGCGCCTGGAATTAGTGCATCCCCTTCGGAAGACAACATGCGGTATTTCAATGTGATGATCCTTGGCCCAACTCAGTCTCCTTATGAAGGTAGTGATGACCCTAACAACTTGGTTTTACACCTTGAAATGCGTATTTTGTGTTTATCTTTGATAGAAATGGGATATTAATTATTTTGGGGCTTTTGAGTAAGTGTATTATTGTTTTCTGTAAAAGATTTTTGTCTATTATGCAGACTTGTTTTGGGAATGATTCTGAAAGGAAACTGCTTTTATTTGTTGCCATGATATTTCTAATTCACTGCTTTTTTATCTCAAGTTGAACATAAACTGTTCGACTCGACAAACAGTCTATTAGTTATATGAAATGTTATCCTGTTAATAATTTTGCGAGGCAAACAATTTGATTAATGAGGTGGGCACAAGAATATTTGGATCTCATCATTATAGTCGTTAATGATCAAAGAATATCTGCTTGTCTGCTTCTCACAGATGTCCTGTCTTCTTATCATGTGTTTAACTTTAACCCCTGTATACATCTTCTTGAACTATTTTCTTTGAAGTTCGTTATCTTGGTCCACATTGTTAGCCCTTATATGCATCTGAACCTAGGCGTTATATATTTTTACCATATGTACATGTCACAGTCGTGTCCCATGTGTGTATACTTCTATGATCATTTCTAGTGGATTATTTGATGAGCTTATTTCTCGTATGTAACTCTTTTGGTGCACCAAAAAGACTGGGTCAAACACTAGAATTTAGAATAGAAGAGCTAATAAGTTACTGGGTCGAATAAATGGATATTTACATACTCTAATCTTTGTTATTGTGGGTCATCTATTATACTCATTTTCGCATCTTATTTGAAAGTCATAATGTATTATAGATTTGTATGGAAATTGATGCATGAGGTATGGCACTTGGTTGGAGTGGGATAAACAAGACAAGATTATACTCTCGCATCACCACTTTTCCTTTTCATGAAGTTGATGTATTATAAATTTTGACTTTCTGAAGGGTTTATCATCGAGTGTAGAGTGCACCCTGCAGTTCAAATATAATGTATAGTGTCTCATTTTAACTTGGGTGAGACTTGGAAATACATTTGTATGGAAAGGAACTATGTGTTGTCTGTGAACGCTACGCGTGTGTCTCATGTTTGTATGCTTCTCTGATCATATTTTAGGGTTTGGAAAGGAATAGATTACTGAATAACAACTAGCTTGACTATACTGGAATTTTTTTATTCTCTCCTACCTCTCCTCATAAAAGAAAGAAATCTCAAGTTTACTGATGTGCAAGTGTTTTGTTTCCATTACTAGGGGGAGTTTTCAAGCTAGAACTATTTTTGCCTGAAGAATATCCAATGGCTGCTCCAAAGGTACTTAATTTAATTGTTGTCATTTTATTTTCATCTGTGTTGTGATATTATTTTGGTGTTAACTGAAGTTTCTGCTGTGTTCCTGTCTACCAAGAAGAAATGACAACATAATTATAAATTATTTTCACCTGTAAACTTAGAAAAAGGTTGTTCCTCTTTATTTGTCGTTTTCAAAGTTCAATGCAACATCAATTATTGTTTTGTCAATAATACCCTTAACTATTCACTGCAGAGGGAGAAATAGGTGGAATAAGTCAATAAATAGTTAAGGGTATCATAGAAAAGGACAAATAATTCCGTCAAAAGTAACAATTTACTGGTCCTATTGGCATGTGTAAATAACCTTAAAATGACGGCTAAAGAGAAACAGATATATTTTTCATGTCTTTGTATCTGATGATCGATGTCAAACTTATAAAGGCCATGGGACGAGATATTCTGTAAATTTGAAATTAATTGCACAGATGCACAGTCTTGTGTACACACTCACCTTGCCCTTCATATCTCCCCCTTTGAAACTGATGCAGCGAGAAATGGTAAACATATTTAATTAACTGTCTTAACATAGTTTTCAAAATTTTAAGATGATGAATAATTTGAGATAAGTTGATGTATTAAAATTGTGTGTGAAAATTCAATCAGCTAGCTTTTTACTTATAAGCTTTCAGCTAAAAAAATAGCTTCTCCGGTTAGGAACCCAAGAATTCTAATCTTCAAGATTAGAGAAACGGGTAAAACAAACTCAAATAGATAAAGATAAAGATTGCACATGGCTGAAGAATTTCTTATTTGTGAAGTGAGATTGAAAGTGAAGATACAACAGGTATACAATGATGATGATGATAACCTTACACACCAAAGGAACACTCATTTCATACCAGATAATTCTCTAGTCACAATTTAAGTATTAAAGCTATCTTTCCCCTCTGCCGATTGATGGCTATTTAAAGACTTCTATGATTAACCAAAATAGCAACTCTTAACAACCACCTAACAAACTTACCAAATTACAAACTTGTACTAACTAACTCTTAACTACTCTAATCATCTAATATTCTATATTCGAACACTGCCATTTGTTAGATTGTCCAAATAGAGTCACAGTATGTGTTTCTTTTAAAATGAAAATTGAAAGATTTTCTTGATAAATTGGGATGGAATATAATAATGCTCAATTTCTACGTGGTCTGGGATAATGTTGTGTATATTGAAGCCATTACTACTTCCAGGGTTTAGGAAACGACAGTCACAGCTATCGTGTATCTGATAGGGGTTTACATTTACGAAAGAGGTCTAGTAGGAGGTTCTTTTTATTTTATTTTTTAAGGATAATTTAATCATGCCTCCCTCAGAATTGTGGATTGTTTATTATTTTTTTCTTTCTTTTCTGGCTTTGATTCTTGTGATGATAAAATATGATATGATAGATTTGGAGTGTGCATTTTTTCTAAAAAATTCTGTAATAATTCTTATTCCTAATTCAATCATGCCTTGCTTCTTCCAGGTCAGGTTCTTGACAAAAATATATCATCCTAACATTGACAAGGTATGCTTTGCTTTGCTTCCCTTGCCTTTCTTTTCTTCTTTGATGATAAGCTTTTATAAAAGTTGAAATTCGATGCAGCTTGGCAGGATATGTCTTGATATTCTGAAAGATAAGTGGAGTCCCGCCCTTCAGATTCGCACTGTACTTTTGAGGTATATTTAATTTTCACCTTTTACTCTAGTGGATTAACTTTTTGCTGGACCAATTCATTTCCTGAAAAACTGTAGTTAATAGATCATATGTGAAATAATTTTTTTATTTATCTTAAATCATTTTTAAAACTGTAGTTAACTCAAGTGGATTTGCAAGCCTCCAAATTGAACTTTTTTGAAATAAATGTTGTATGTATCTTAAATCATTTTGTTGAAAGAATTTTTCATGTTGGTAAAGTTTTATGGGAAAACAGATGGTTAAATTAACTTGTCAAATAGACATTTTTTAAACCATAAATTATCTGGTTGAATGCATAATTGATTGTGGTGACTTACTCAATTTGTATGCGAAGGTTCAGCCGGATCTTACTTTTGATTTCTGAGTTACTCTTGCATATACGTAACATTGTGGAAAGTTGGTTAAAAATGAAAAATTAACCAGCTGTGTATTGGATATAATGTTTTATTGATAATAATGTAAATTTTGTGGGTCCTATTTTAGTATTCAAGCTCTTTTGAGTGCACCAAACCCAGATGATCCTCTTTCTGAGAACATTGCTAAGCATTGGAAATCTAACGAGGCTGAGGCTGTTGAGACAGGTATGATCTCTTCTGCTAGCATGATTACATCAAAGTTTTTTATTTTTTAATGATAGCATCAGACGTGCTATGTGTATATTCTCTTATGAAAATGGTGTTTATTTTTTAAATCTGCAGCCAAAGAGTGGACCAGATTATATGCCAGTGGTGCTTGA
Protein sequence

>MS.gene40572.t1

MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAVETAKEWTRLYASGA