Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057721.t1 | RHN61519.1 | 90.9 | 385 | 28 | 3 | 1 | 384 | 1 | 379 | 8.10E-135 | 490.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057721.t1 | Q9SZP8 | 54.5 | 404 | 141 | 14 | 2 | 378 | 3 | 390 | 3.5e-62 | 240.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057721.t1 | A0A396I7C0 | 90.9 | 385 | 28 | 3 | 1 | 384 | 1 | 379 | 5.9e-135 | 490.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04915 | MS.gene057721 | 0.803438 | 3.49E-49 | -1.69E-46 |
| MS.gene04917 | MS.gene057721 | 0.805628 | 1.22E-49 | -1.69E-46 |
| MS.gene050629 | MS.gene057721 | -0.805321 | 1.41E-49 | -1.69E-46 |
| MS.gene056992 | MS.gene057721 | 0.815235 | 1.03E-51 | -1.69E-46 |
| MS.gene057721 | MS.gene063636 | 0.802666 | 5.04E-49 | -1.69E-46 |
| MS.gene057721 | MS.gene066221 | 0.825378 | 4.84E-54 | -1.69E-46 |
| MS.gene057721 | MS.gene069225 | 0.817192 | 3.75E-52 | -1.69E-46 |
| MS.gene057721 | MS.gene29719 | 0.814983 | 1.17E-51 | -1.69E-46 |
| MS.gene057721 | MS.gene33183 | 0.800184 | 1.62E-48 | -1.69E-46 |
| MS.gene057721 | MS.gene37988 | 0.841987 | 3.40E-58 | -1.69E-46 |
| MS.gene057721 | MS.gene37989 | 0.841985 | 3.41E-58 | -1.69E-46 |
| MS.gene057721 | MS.gene38261 | 0.837952 | 3.84E-57 | -1.69E-46 |
| MS.gene057721 | MS.gene38262 | 0.825092 | 5.66E-54 | -1.69E-46 |
| MS.gene057721 | MS.gene52610 | 0.810669 | 1.03E-50 | -1.69E-46 |
| MS.gene057721 | MS.gene56127 | 0.828069 | 1.10E-54 | -1.69E-46 |
| MS.gene057721 | MS.gene59207 | 0.81765 | 2.95E-52 | -1.69E-46 |
| MS.gene057721 | MS.gene63281 | 0.802197 | 6.29E-49 | -1.69E-46 |
| MS.gene057721 | MS.gene78959 | 0.81122 | 7.81E-51 | -1.69E-46 |
| MS.gene057721 | MS.gene81055 | 0.805618 | 1.22E-49 | -1.69E-46 |
| MS.gene057721 | MS.gene81285 | 0.830983 | 2.16E-55 | -1.69E-46 |
| MS.gene057721 | MS.gene90965 | 0.838516 | 2.75E-57 | -1.69E-46 |
| MS.gene057721 | MS.gene94183 | 0.802754 | 4.83E-49 | -1.69E-46 |
| MS.gene057721 | MS.gene96690 | 0.8022 | 6.28E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057721.t1 | MTR_4g074040 | 96.875 | 384 | 5 | 3 | 1 | 383 | 1 | 378 | 0.0 | 717 |
| MS.gene057721.t1 | MTR_8g089785 | 37.500 | 320 | 141 | 11 | 39 | 339 | 33 | 312 | 3.92e-26 | 110 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057721.t1 | AT4G38710 | 50.843 | 415 | 142 | 15 | 1 | 378 | 1 | 390 | 9.63e-80 | 252 |
| MS.gene057721.t1 | AT4G38710 | 51.225 | 408 | 137 | 15 | 1 | 371 | 1 | 383 | 5.33e-79 | 251 |
| MS.gene057721.t1 | AT3G26400 | 31.700 | 347 | 184 | 11 | 43 | 339 | 38 | 381 | 4.24e-17 | 83.6 |
Find 162 sgRNAs with CRISPR-Local
Find 174 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTAATGGTGGTGTTGTTTC+TGG | 0.171573 | 4.4:-35952731 | MS.gene057721:CDS |
| GGGGTTCTGGTTCGGGTTCT+AGG | 0.179677 | 4.4:-35953222 | MS.gene057721:CDS |
| TATTGCATCCAAAACGTTAT+TGG | 0.186162 | 4.4:+35952445 | None:intergenic |
| GTGTTGGTGGTGGGTTTGAT+AGG | 0.223609 | 4.4:-35952952 | MS.gene057721:CDS |
| GAGAGAGGTGGAGGTGGAGG+TGG | 0.250977 | 4.4:-35953067 | MS.gene057721:CDS |
| AAGGCCAAGGGAGCAGGTTT+TGG | 0.279830 | 4.4:-35952666 | MS.gene057721:CDS |
| TCGAGATGGGGTTCTGGTTC+GGG | 0.281585 | 4.4:-35953229 | MS.gene057721:CDS |
| TCTGGTGGTGGTGTTGGTGG+TGG | 0.292406 | 4.4:-35952962 | MS.gene057721:CDS |
| ACTGCAGTGGTTGAAGGATT+TGG | 0.315084 | 4.4:-35952581 | MS.gene057721:CDS |
| AGAGAATCGAGTCGTGATTC+GGG | 0.316526 | 4.4:-35953166 | MS.gene057721:CDS |
| TGCAGTCTCCTTAATCTTCA+TGG | 0.319993 | 4.4:+35952598 | None:intergenic |
| GGATTTGGAAAGAGGGGTTT+TGG | 0.320358 | 4.4:-35952566 | MS.gene057721:CDS |
| TTCGAGATGGGGTTCTGGTT+CGG | 0.320995 | 4.4:-35953230 | MS.gene057721:CDS |
| GTTTGTTACCAATAACGTTT+TGG | 0.324506 | 4.4:-35952453 | MS.gene057721:CDS |
| CTGGTGGTGGTGTTGGTGGT+GGG | 0.336609 | 4.4:-35952961 | MS.gene057721:CDS |
| AGAAGGGAGAGAGGTGGAGG+TGG | 0.338435 | 4.4:-35953073 | MS.gene057721:CDS |
| GGGCTGATGAGATTGATAAT+TGG | 0.339903 | 4.4:-35953135 | MS.gene057721:CDS |
| AGGGAGAGAGGTGGAGGTGG+AGG | 0.344195 | 4.4:-35953070 | MS.gene057721:CDS |
| GCTTGAGACCATGAAGATTA+AGG | 0.344368 | 4.4:-35952606 | MS.gene057721:CDS |
| TTTGGTTCTGGTGGTGGTGT+TGG | 0.351519 | 4.4:-35952968 | MS.gene057721:CDS |
| TAGAGAATCGAGTCGTGATT+CGG | 0.353727 | 4.4:-35953167 | MS.gene057721:CDS |
| TCTGTTTCGAGATGGGGTTC+TGG | 0.360395 | 4.4:-35953235 | MS.gene057721:CDS |
| CCATCGGAGGGACGGAGATT+TGG | 0.361330 | 4.4:-35952986 | MS.gene057721:CDS |
| TAAACCGGTTTCTTCTTATA+CGG | 0.361675 | 4.4:-35953398 | MS.gene057721:CDS |
| AGAAGGCTGTTGTTGGGAAT+GGG | 0.370811 | 4.4:-35953102 | MS.gene057721:CDS |
| GTGGTGCGGATTCGGATAAT+TGG | 0.371012 | 4.4:-35952901 | MS.gene057721:CDS |
| GGTTCTGGTGGTGGTGTTGG+TGG | 0.373335 | 4.4:-35952965 | MS.gene057721:CDS |
| AAGAAGGCTGTTGTTGGGAA+TGG | 0.375627 | 4.4:-35953103 | MS.gene057721:CDS |
| CAGTGAACTCAGCCAAACTT+AGG | 0.376657 | 4.4:+35953422 | None:intergenic |
| CGGAGATTTGGTTCTGGTGG+TGG | 0.383874 | 4.4:-35952974 | MS.gene057721:CDS |
| GTGGTGGTGGTGGAAGGCCT+AGG | 0.384246 | 4.4:-35952817 | MS.gene057721:CDS |
| AAAGTAGGGTTTGGTGTTAG+TGG | 0.385027 | 4.4:-35952923 | MS.gene057721:CDS |
| TTCTTATACGGCTCAAGATC+CGG | 0.391165 | 4.4:-35953386 | MS.gene057721:CDS |
| GGATAGTTGGGTTTCGAGTA+AGG | 0.394999 | 4.4:-35953011 | MS.gene057721:CDS |
| GAAAGCACAAACCCTAAGTT+TGG | 0.395026 | 4.4:-35953434 | MS.gene057721:CDS |
| TCAGCCAAAACCTGCTCCCT+TGG | 0.399465 | 4.4:+35952662 | None:intergenic |
| GGTTCTAGGGTTTCTGAGGA+TGG | 0.401684 | 4.4:-35953208 | MS.gene057721:CDS |
| TGGGAATGGGTTTGAGAGAA+GGG | 0.407540 | 4.4:-35953089 | MS.gene057721:CDS |
| GGCTGATGGATCGGATAGTT+GGG | 0.409771 | 4.4:-35953023 | MS.gene057721:CDS |
| AAGTGCCCATGCACCTGGTT+TGG | 0.409980 | 4.4:+35953579 | None:intergenic |
| TTTGATAGGGAGAGGAAAGT+AGG | 0.414560 | 4.4:-35952938 | MS.gene057721:CDS |
| GCCGGTGAGTAATGAAAATC+AGG | 0.418244 | 4.4:-35952771 | MS.gene057721:CDS |
| GGGCTGATGGATCGGATAGT+TGG | 0.418883 | 4.4:-35953024 | MS.gene057721:CDS |
| AGGGAATTCCGCAAGTGGTT+TGG | 0.420285 | 4.4:+35953495 | None:intergenic |
| GAGAGAAGGGAGAGAGGTGG+AGG | 0.422798 | 4.4:-35953076 | MS.gene057721:CDS |
| AACCGCTGAGGAACTTGAAC+GGG | 0.429895 | 4.4:-35953335 | MS.gene057721:CDS |
| TCTGAGGATGGGAGAAGGAA+TGG | 0.430363 | 4.4:-35953196 | MS.gene057721:CDS |
| TTTGGTTCTGGCAATGGGCG+TGG | 0.435125 | 4.4:-35952548 | MS.gene057721:CDS |
| CTGAGGATGGGAGAAGGAAT+GGG | 0.440534 | 4.4:-35953195 | MS.gene057721:CDS |
| TTGATAGGGAGAGGAAAGTA+GGG | 0.443677 | 4.4:-35952937 | MS.gene057721:CDS |
| AAGGAGACTGCAGTGGTTGA+AGG | 0.444170 | 4.4:-35952587 | MS.gene057721:CDS |
| TGAGGCAAGGCCAAGGGAGC+AGG | 0.446100 | 4.4:-35952672 | MS.gene057721:CDS |
| GCTGGGAAGAAGGCTGTTGT+TGG | 0.446173 | 4.4:-35953109 | MS.gene057721:CDS |
| GGCTGAGTTCACTGCTAAAC+CGG | 0.448280 | 4.4:-35953413 | MS.gene057721:CDS |
| TGTTAGTGGTGGTGCGGATT+CGG | 0.449936 | 4.4:-35952909 | MS.gene057721:CDS |
| TGTTGGTGGTGGGTTTGATA+GGG | 0.451230 | 4.4:-35952951 | MS.gene057721:CDS |
| CTTGGCCTTGCCTCACCAAA+CGG | 0.452219 | 4.4:+35952680 | None:intergenic |
| AGCGGTTCGCTGACGTGGAC+CGG | 0.454562 | 4.4:+35953351 | None:intergenic |
| TGAGAGTTCTGTTTCGAGAT+GGG | 0.454620 | 4.4:-35953242 | MS.gene057721:CDS |
| AGAGAGGTGGAGGTGGAGGT+GGG | 0.455658 | 4.4:-35953066 | MS.gene057721:CDS |
| GGCTGATGAGATTGATAATT+GGG | 0.455921 | 4.4:-35953134 | MS.gene057721:CDS |
| ACGGCAGTGGTGGTGGTGGA+AGG | 0.456467 | 4.4:-35952823 | MS.gene057721:CDS |
| GGGTTTGAGAGAAGGGAGAG+AGG | 0.458141 | 4.4:-35953082 | MS.gene057721:CDS |
| TCCTCAGCGGTTCGCTGACG+TGG | 0.458250 | 4.4:+35953346 | None:intergenic |
| TTACTCACCGGCGCTGTTCG+TGG | 0.461906 | 4.4:+35952782 | None:intergenic |
| TTGGGAATGGGTTTGAGAGA+AGG | 0.473730 | 4.4:-35953090 | MS.gene057721:CDS |
| CTAATGGTGGTGTTGTTTCT+GGG | 0.473999 | 4.4:-35952730 | MS.gene057721:CDS |
| AGTGAACTCAGCCAAACTTA+GGG | 0.476224 | 4.4:+35953423 | None:intergenic |
| GAGGGACGGAGATTTGGTTC+TGG | 0.476898 | 4.4:-35952980 | MS.gene057721:CDS |
| GTTGGTAACGGCAGTGGTGG+TGG | 0.477421 | 4.4:-35952830 | MS.gene057721:CDS |
| GATTCGCAGTCACGGGCTGA+TGG | 0.478762 | 4.4:-35953037 | MS.gene057721:CDS |
| GAGATTGATAATTGGGCTGC+TGG | 0.479488 | 4.4:-35953127 | MS.gene057721:CDS |
| AACTTGAACGGGACCGGACT+AGG | 0.483014 | 4.4:-35953324 | MS.gene057721:CDS |
| AGGGAGAGGAAAGTAGGGTT+TGG | 0.486006 | 4.4:-35952932 | MS.gene057721:CDS |
| TGGTTGAAGGATTTGGAAAG+AGG | 0.486516 | 4.4:-35952574 | MS.gene057721:CDS |
| ATCGATCTGAGAGGAGTTGG+AGG | 0.487950 | 4.4:-35952520 | MS.gene057721:CDS |
| AAGATCGATCTGAGAGGAGT+TGG | 0.489720 | 4.4:-35952523 | MS.gene057721:CDS |
| CTGATGATGGTCTTTCTGAA+AGG | 0.490350 | 4.4:-35952475 | MS.gene057721:CDS |
| GGGTTCTGGTTCGGGTTCTA+GGG | 0.490463 | 4.4:-35953221 | MS.gene057721:CDS |
| TCGTGATTCGGGGCCGTCGA+GGG | 0.496272 | 4.4:-35953155 | MS.gene057721:CDS |
| CTGAGGAACTTGAACGGGAC+CGG | 0.496953 | 4.4:-35953330 | MS.gene057721:CDS |
| CCTAAGGGTGCAAATCCGTT+TGG | 0.499343 | 4.4:-35952695 | MS.gene057721:CDS |
| GGACCGGTGGGAAGATCAAC+CGG | 0.500535 | 4.4:+35953367 | None:intergenic |
| CTTGGTCCAAACCAGGTGCA+TGG | 0.500565 | 4.4:-35953585 | MS.gene057721:CDS |
| CTGGGAAGAAGGCTGTTGTT+GGG | 0.502396 | 4.4:-35953108 | MS.gene057721:CDS |
| GAATCAAGTGCCCATGCACC+TGG | 0.503993 | 4.4:+35953574 | None:intergenic |
| TGGCTGAGAAAGGTCAGGAT+TGG | 0.507073 | 4.4:-35952646 | MS.gene057721:CDS |
| TTTGAGAGAAGGGAGAGAGG+TGG | 0.508237 | 4.4:-35953079 | MS.gene057721:CDS |
| GGTTGAAGGATTTGGAAAGA+GGG | 0.514378 | 4.4:-35952573 | MS.gene057721:CDS |
| AAGAAAGGTGAATTCAGTGT+TGG | 0.515274 | 4.4:-35952872 | MS.gene057721:CDS |
| CTTACGGTGATCGTGGCGAT+AGG | 0.517181 | 4.4:-35953282 | MS.gene057721:CDS |
| TGGGAATGTAGCTAAGCCTA+AGG | 0.522513 | 4.4:-35952711 | MS.gene057721:CDS |
| GAACGGGACCGGACTAGGAT+TGG | 0.526589 | 4.4:-35953319 | MS.gene057721:CDS |
| GCTGTTGCTACTAATACTAA+TGG | 0.527495 | 4.4:-35952746 | MS.gene057721:CDS |
| ATGAGAGTTCTGTTTCGAGA+TGG | 0.535167 | 4.4:-35953243 | MS.gene057721:CDS |
| TTTGGTTTCAACAACGTTGT+TGG | 0.536441 | 4.4:+35953513 | None:intergenic |
| AACCACCACCAATCCTAGTC+CGG | 0.537944 | 4.4:+35953311 | None:intergenic |
| CGTGGTTGCAAAACAAGCCT+AGG | 0.538727 | 4.4:+35952800 | None:intergenic |
| CCAAACGGATTTGCACCCTT+AGG | 0.541287 | 4.4:+35952695 | None:intergenic |
| GATAATTGGAATAAGAAGAA+AGG | 0.541335 | 4.4:-35952887 | MS.gene057721:CDS |
| GTGATCGTGGCGATAGGGAC+AGG | 0.542971 | 4.4:-35953276 | MS.gene057721:CDS |
| GTGGTGGGTTTGATAGGGAG+AGG | 0.544767 | 4.4:-35952946 | MS.gene057721:CDS |
| TGAGCCGTATAAGAAGAAAC+CGG | 0.545095 | 4.4:+35953394 | None:intergenic |
| GAGAATGTTGGTAACGGCAG+TGG | 0.545752 | 4.4:-35952836 | MS.gene057721:CDS |
| CGGCGGCAACAGCGAGGGAA+GGG | 0.546251 | 4.4:+35953476 | None:intergenic |
| TAATTGGGCTGCTGGGAAGA+AGG | 0.547401 | 4.4:-35953119 | MS.gene057721:CDS |
| GGTAACGGCAGTGGTGGTGG+TGG | 0.549406 | 4.4:-35952827 | MS.gene057721:CDS |
| AGTGAGAGAAACGAGAATGT+TGG | 0.551147 | 4.4:-35952848 | MS.gene057721:CDS |
| GAGAGTTCTGTTTCGAGATG+GGG | 0.551992 | 4.4:-35953241 | MS.gene057721:CDS |
| TGTTGAAACCAAACCACTTG+CGG | 0.553130 | 4.4:-35953503 | MS.gene057721:CDS |
| GTTCTAGGGTTTCTGAGGAT+GGG | 0.553840 | 4.4:-35953207 | MS.gene057721:CDS |
| TTACGGTGATCGTGGCGATA+GGG | 0.554028 | 4.4:-35953281 | MS.gene057721:CDS |
| TTGGTCCAAACCAGGTGCAT+GGG | 0.554652 | 4.4:-35953584 | MS.gene057721:CDS |
| GGTTCGCTGACGTGGACCGG+TGG | 0.555585 | 4.4:+35953354 | None:intergenic |
| CCATCATCACCATCTGATGA+TGG | 0.556090 | 4.4:-35952488 | MS.gene057721:CDS |
| GGTTTCAACAACGTTGTTGG+TGG | 0.557431 | 4.4:+35953516 | None:intergenic |
| GCAGTCACGGGCTGATGGAT+CGG | 0.557550 | 4.4:-35953032 | MS.gene057721:CDS |
| CCAAATCTCCGTCCCTCCGA+TGG | 0.559164 | 4.4:+35952986 | None:intergenic |
| TTCGGGTTCTAGGGTTTCTG+AGG | 0.561999 | 4.4:-35953212 | MS.gene057721:CDS |
| GCGGCGGCAACAGCGAGGGA+AGG | 0.562888 | 4.4:+35953475 | None:intergenic |
| CGTTTGGTGAGGCAAGGCCA+AGG | 0.563020 | 4.4:-35952679 | MS.gene057721:CDS |
| GTATCTGCTTGGTCCAAACC+AGG | 0.566929 | 4.4:-35953592 | MS.gene057721:CDS |
| CCATCATCAGATGGTGATGA+TGG | 0.569524 | 4.4:+35952488 | None:intergenic |
| GTTGAAGGATTTGGAAAGAG+GGG | 0.569718 | 4.4:-35952572 | MS.gene057721:CDS |
| GTCGTGATTCGGGGCCGTCG+AGG | 0.571331 | 4.4:-35953156 | MS.gene057721:CDS |
| GTAGGGTTTGGTGTTAGTGG+TGG | 0.575486 | 4.4:-35952920 | MS.gene057721:CDS |
| TTCGAGTAAGGTGCCATCGG+AGG | 0.575693 | 4.4:-35952999 | MS.gene057721:CDS |
| TGGCGGCTACTGTATCTGCT+TGG | 0.576953 | 4.4:-35953603 | MS.gene057721:CDS |
| TTTGCAACCACGAACAGCGC+CGG | 0.580290 | 4.4:-35952789 | MS.gene057721:CDS |
| CGGGACCGGACTAGGATTGG+TGG | 0.584241 | 4.4:-35953316 | MS.gene057721:CDS |
| AGATTGATAATTGGGCTGCT+GGG | 0.584666 | 4.4:-35953126 | MS.gene057721:CDS |
| CAAATCCGTTTGGTGAGGCA+AGG | 0.593201 | 4.4:-35952685 | MS.gene057721:CDS |
| TTTAGATCTTACGGTGATCG+TGG | 0.595169 | 4.4:-35953289 | MS.gene057721:CDS |
| GTTTGGTGTTAGTGGTGGTG+CGG | 0.596653 | 4.4:-35952915 | MS.gene057721:CDS |
| GGGTTTCTGAGGATGGGAGA+AGG | 0.596947 | 4.4:-35953201 | MS.gene057721:CDS |
| GTAAGGTGCCATCGGAGGGA+CGG | 0.598505 | 4.4:-35952994 | MS.gene057721:CDS |
| TCGAGTAAGGTGCCATCGGA+GGG | 0.598520 | 4.4:-35952998 | MS.gene057721:CDS |
| GGTTTCGAGTAAGGTGCCAT+CGG | 0.599540 | 4.4:-35953002 | MS.gene057721:CDS |
| GGACGGAGATTTGGTTCTGG+TGG | 0.601916 | 4.4:-35952977 | MS.gene057721:CDS |
| GACCGGACTAGGATTGGTGG+TGG | 0.603483 | 4.4:-35953313 | MS.gene057721:CDS |
| AGGATGGGAGAAGGAATGGG+AGG | 0.603895 | 4.4:-35953192 | MS.gene057721:CDS |
| TGTTGCGGCGGCAACAGCGA+GGG | 0.606576 | 4.4:+35953471 | None:intergenic |
| GGATGGGAGAAGGAATGGGA+GGG | 0.609433 | 4.4:-35953191 | MS.gene057721:CDS |
| AGGGAAGGGAATTCCGCAAG+TGG | 0.611671 | 4.4:+35953490 | None:intergenic |
| GTTCGCTGACGTGGACCGGT+GGG | 0.613163 | 4.4:+35953355 | None:intergenic |
| TCAGAAAGACCATCATCAGA+TGG | 0.615886 | 4.4:+35952479 | None:intergenic |
| GATCCGGTTGATCTTCCCAC+CGG | 0.621219 | 4.4:-35953370 | MS.gene057721:CDS |
| GAACCGCTGAGGAACTTGAA+CGG | 0.623722 | 4.4:-35953336 | MS.gene057721:CDS |
| GGGAATGTAGCTAAGCCTAA+GGG | 0.627060 | 4.4:-35952710 | MS.gene057721:CDS |
| GTTTGGTGAGGCAAGGCCAA+GGG | 0.627082 | 4.4:-35952678 | MS.gene057721:CDS |
| TTGTTGCGGCGGCAACAGCG+AGG | 0.637895 | 4.4:+35953470 | None:intergenic |
| AATGTTGGTAACGGCAGTGG+TGG | 0.640974 | 4.4:-35952833 | MS.gene057721:CDS |
| GAGAATCGAGTCGTGATTCG+GGG | 0.642199 | 4.4:-35953165 | MS.gene057721:CDS |
| AGAAACGAGAATGTTGGTAA+CGG | 0.642254 | 4.4:-35952842 | MS.gene057721:CDS |
| TCAATCTCATCAGCCCTCGA+CGG | 0.643798 | 4.4:+35953142 | None:intergenic |
| GGGTGCAAATCCGTTTGGTG+AGG | 0.653824 | 4.4:-35952690 | MS.gene057721:CDS |
| TCCACGTCAGCGAACCGCTG+AGG | 0.659911 | 4.4:-35953347 | MS.gene057721:CDS |
| GTGGCGATAGGGACAGGACA+AGG | 0.671509 | 4.4:-35953270 | MS.gene057721:CDS |
| GTTGCTACTAATACTAATGG+TGG | 0.672658 | 4.4:-35952743 | MS.gene057721:CDS |
| GAAGATTAAGGAGACTGCAG+TGG | 0.680724 | 4.4:-35952594 | MS.gene057721:CDS |
| GTCCCGTTCAAGTTCCTCAG+CGG | 0.684186 | 4.4:+35953333 | None:intergenic |
| GTGGTGAAGATCGATCTGAG+AGG | 0.769323 | 4.4:-35952529 | MS.gene057721:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | GATAATTGGAATAAGAAGAA+AGG | - | chr4.4:35953159-35953178 | MS.gene057721:CDS | 25.0% |
| TATTGCATCCAAAACGTTAT+TGG | + | chr4.4:35953604-35953623 | None:intergenic | 30.0% | |
| ! | GTTTGTGCTTTCTTCTTTTT+AGG | + | chr4.4:35952604-35952623 | None:intergenic | 30.0% |
| ! | TAAACCGGTTTCTTCTTATA+CGG | - | chr4.4:35952648-35952667 | MS.gene057721:CDS | 30.0% |
| !! | GTTTGTTACCAATAACGTTT+TGG | - | chr4.4:35953593-35953612 | MS.gene057721:CDS | 30.0% |
| !!! | CTTCTTTTTAGGTTTTGTTG+CGG | + | chr4.4:35952593-35952612 | None:intergenic | 30.0% |
| AAGAAAGGTGAATTCAGTGT+TGG | - | chr4.4:35953174-35953193 | MS.gene057721:CDS | 35.0% | |
| GCTGTTGCTACTAATACTAA+TGG | - | chr4.4:35953300-35953319 | MS.gene057721:CDS | 35.0% | |
| GTTGCTACTAATACTAATGG+TGG | - | chr4.4:35953303-35953322 | MS.gene057721:CDS | 35.0% | |
| ! | AGAAACGAGAATGTTGGTAA+CGG | - | chr4.4:35953204-35953223 | MS.gene057721:CDS | 35.0% |
| ! | GGCTGATGAGATTGATAATT+GGG | - | chr4.4:35952912-35952931 | MS.gene057721:CDS | 35.0% |
| ! | TCCTGATTTTCATTACTCAC+CGG | + | chr4.4:35953279-35953298 | None:intergenic | 35.0% |
| ! | TTTGGTTTCAACAACGTTGT+TGG | + | chr4.4:35952536-35952555 | None:intergenic | 35.0% |
| AGTGAACTCAGCCAAACTTA+GGG | + | chr4.4:35952626-35952645 | None:intergenic | 40.0% | |
| AGTGAGAGAAACGAGAATGT+TGG | - | chr4.4:35953198-35953217 | MS.gene057721:CDS | 40.0% | |
| ATGAGAGTTCTGTTTCGAGA+TGG | - | chr4.4:35952803-35952822 | MS.gene057721:CDS | 40.0% | |
| GCTTGAGACCATGAAGATTA+AGG | - | chr4.4:35953440-35953459 | MS.gene057721:CDS | 40.0% | |
| GGTTGAAGGATTTGGAAAGA+GGG | - | chr4.4:35953473-35953492 | MS.gene057721:CDS | 40.0% | |
| GTTGAAGGATTTGGAAAGAG+GGG | - | chr4.4:35953474-35953493 | MS.gene057721:CDS | 40.0% | |
| TAGAGAATCGAGTCGTGATT+CGG | - | chr4.4:35952879-35952898 | MS.gene057721:CDS | 40.0% | |
| TCAGAAAGACCATCATCAGA+TGG | + | chr4.4:35953570-35953589 | None:intergenic | 40.0% | |
| TGAGAGTTCTGTTTCGAGAT+GGG | - | chr4.4:35952804-35952823 | MS.gene057721:CDS | 40.0% | |
| TGAGCCGTATAAGAAGAAAC+CGG | + | chr4.4:35952655-35952674 | None:intergenic | 40.0% | |
| TGCAGTCTCCTTAATCTTCA+TGG | + | chr4.4:35953451-35953470 | None:intergenic | 40.0% | |
| TGGTTGAAGGATTTGGAAAG+AGG | - | chr4.4:35953472-35953491 | MS.gene057721:CDS | 40.0% | |
| TGTTGAAACCAAACCACTTG+CGG | - | chr4.4:35952543-35952562 | MS.gene057721:CDS | 40.0% | |
| TTCTTATACGGCTCAAGATC+CGG | - | chr4.4:35952660-35952679 | MS.gene057721:CDS | 40.0% | |
| TTGATAGGGAGAGGAAAGTA+GGG | - | chr4.4:35953109-35953128 | MS.gene057721:CDS | 40.0% | |
| TTTAGATCTTACGGTGATCG+TGG | - | chr4.4:35952757-35952776 | MS.gene057721:CDS | 40.0% | |
| TTTGATAGGGAGAGGAAAGT+AGG | - | chr4.4:35953108-35953127 | MS.gene057721:CDS | 40.0% | |
| ! | AGATTGATAATTGGGCTGCT+GGG | - | chr4.4:35952920-35952939 | MS.gene057721:CDS | 40.0% |
| ! | GAAAGCACAAACCCTAAGTT+TGG | - | chr4.4:35952612-35952631 | MS.gene057721:CDS | 40.0% |
| ! | GGGCTGATGAGATTGATAAT+TGG | - | chr4.4:35952911-35952930 | MS.gene057721:CDS | 40.0% |
| !! | AAAGTAGGGTTTGGTGTTAG+TGG | - | chr4.4:35953123-35953142 | MS.gene057721:CDS | 40.0% |
| !! | ACTAATGGTGGTGTTGTTTC+TGG | - | chr4.4:35953315-35953334 | MS.gene057721:CDS | 40.0% |
| !! | CTAATGGTGGTGTTGTTTCT+GGG | - | chr4.4:35953316-35953335 | MS.gene057721:CDS | 40.0% |
| !! | CTGATGATGGTCTTTCTGAA+AGG | - | chr4.4:35953571-35953590 | MS.gene057721:CDS | 40.0% |
| !!! | CTTTTTAGGTTTTGTTGCGG+CGG | + | chr4.4:35952590-35952609 | None:intergenic | 40.0% |
| !!! | GGTGGTGGTTTTAGATCTTA+CGG | - | chr4.4:35952748-35952767 | MS.gene057721:CDS | 40.0% |
| !!! | GGTTTTTTGATTCGCAGTCA+CGG | - | chr4.4:35953001-35953020 | MS.gene057721:CDS | 40.0% |
| !!! | GTTTTTTGATTCGCAGTCAC+GGG | - | chr4.4:35953002-35953021 | MS.gene057721:CDS | 40.0% |
| AAGAAGGCTGTTGTTGGGAA+TGG | - | chr4.4:35952943-35952962 | MS.gene057721:CDS | 45.0% | |
| AAGATCGATCTGAGAGGAGT+TGG | - | chr4.4:35953523-35953542 | MS.gene057721:CDS | 45.0% | |
| ACTGCAGTGGTTGAAGGATT+TGG | - | chr4.4:35953465-35953484 | MS.gene057721:CDS | 45.0% | |
| AGAAGGCTGTTGTTGGGAAT+GGG | - | chr4.4:35952944-35952963 | MS.gene057721:CDS | 45.0% | |
| AGAGAATCGAGTCGTGATTC+GGG | - | chr4.4:35952880-35952899 | MS.gene057721:CDS | 45.0% | |
| CAGTGAACTCAGCCAAACTT+AGG | + | chr4.4:35952627-35952646 | None:intergenic | 45.0% | |
| CCATCATCACCATCTGATGA+TGG | - | chr4.4:35953558-35953577 | MS.gene057721:CDS | 45.0% | |
| GAAGATTAAGGAGACTGCAG+TGG | - | chr4.4:35953452-35953471 | MS.gene057721:CDS | 45.0% | |
| GAGAGTTCTGTTTCGAGATG+GGG | - | chr4.4:35952805-35952824 | MS.gene057721:CDS | 45.0% | |
| GCCGGTGAGTAATGAAAATC+AGG | - | chr4.4:35953275-35953294 | MS.gene057721:CDS | 45.0% | |
| GGGAATGTAGCTAAGCCTAA+GGG | - | chr4.4:35953336-35953355 | MS.gene057721:CDS | 45.0% | |
| GGTTTCAACAACGTTGTTGG+TGG | + | chr4.4:35952533-35952552 | None:intergenic | 45.0% | |
| TGGGAATGTAGCTAAGCCTA+AGG | - | chr4.4:35953335-35953354 | MS.gene057721:CDS | 45.0% | |
| ! | CCATCATCAGATGGTGATGA+TGG | + | chr4.4:35953561-35953580 | None:intergenic | 45.0% |
| ! | GAGATTGATAATTGGGCTGC+TGG | - | chr4.4:35952919-35952938 | MS.gene057721:CDS | 45.0% |
| ! | GGATAGTTGGGTTTCGAGTA+AGG | - | chr4.4:35953035-35953054 | MS.gene057721:CDS | 45.0% |
| ! | GGATTTGGAAAGAGGGGTTT+TGG | - | chr4.4:35953480-35953499 | MS.gene057721:CDS | 45.0% |
| ! | TGGGAATGGGTTTGAGAGAA+GGG | - | chr4.4:35952957-35952976 | MS.gene057721:CDS | 45.0% |
| ! | TTGGGAATGGGTTTGAGAGA+AGG | - | chr4.4:35952956-35952975 | MS.gene057721:CDS | 45.0% |
| !! | GTTCTAGGGTTTCTGAGGAT+GGG | - | chr4.4:35952839-35952858 | MS.gene057721:CDS | 45.0% |
| !! | TGTTGGTGGTGGGTTTGATA+GGG | - | chr4.4:35953095-35953114 | MS.gene057721:CDS | 45.0% |
| AACCACCACCAATCCTAGTC+CGG | + | chr4.4:35952738-35952757 | None:intergenic | 50.0% | |
| AACCGCTGAGGAACTTGAAC+GGG | - | chr4.4:35952711-35952730 | MS.gene057721:CDS | 50.0% | |
| AAGGAGACTGCAGTGGTTGA+AGG | - | chr4.4:35953459-35953478 | MS.gene057721:CDS | 50.0% | |
| AGGGAATTCCGCAAGTGGTT+TGG | + | chr4.4:35952554-35952573 | None:intergenic | 50.0% | |
| AGGGAGAGGAAAGTAGGGTT+TGG | - | chr4.4:35953114-35953133 | MS.gene057721:CDS | 50.0% | |
| ATCGATCTGAGAGGAGTTGG+AGG | - | chr4.4:35953526-35953545 | MS.gene057721:CDS | 50.0% | |
| CGTGGTTGCAAAACAAGCCT+AGG | + | chr4.4:35953249-35953268 | None:intergenic | 50.0% | |
| CTGAGGATGGGAGAAGGAAT+GGG | - | chr4.4:35952851-35952870 | MS.gene057721:CDS | 50.0% | |
| CTGGGAAGAAGGCTGTTGTT+GGG | - | chr4.4:35952938-35952957 | MS.gene057721:CDS | 50.0% | |
| GAACCGCTGAGGAACTTGAA+CGG | - | chr4.4:35952710-35952729 | MS.gene057721:CDS | 50.0% | |
| GAGAATCGAGTCGTGATTCG+GGG | - | chr4.4:35952881-35952900 | MS.gene057721:CDS | 50.0% | |
| GGCTGAGTTCACTGCTAAAC+CGG | - | chr4.4:35952633-35952652 | MS.gene057721:CDS | 50.0% | |
| GTATCTGCTTGGTCCAAACC+AGG | - | chr4.4:35952454-35952473 | MS.gene057721:CDS | 50.0% | |
| GTGGTGAAGATCGATCTGAG+AGG | - | chr4.4:35953517-35953536 | MS.gene057721:CDS | 50.0% | |
| GTGGTGCGGATTCGGATAAT+TGG | - | chr4.4:35953145-35953164 | MS.gene057721:CDS | 50.0% | |
| TAATTGGGCTGCTGGGAAGA+AGG | - | chr4.4:35952927-35952946 | MS.gene057721:CDS | 50.0% | |
| TCAATCTCATCAGCCCTCGA+CGG | + | chr4.4:35952907-35952926 | None:intergenic | 50.0% | |
| TCTGAGGATGGGAGAAGGAA+TGG | - | chr4.4:35952850-35952869 | MS.gene057721:CDS | 50.0% | |
| TCTGTTTCGAGATGGGGTTC+TGG | - | chr4.4:35952811-35952830 | MS.gene057721:CDS | 50.0% | |
| TGGCTGAGAAAGGTCAGGAT+TGG | - | chr4.4:35953400-35953419 | MS.gene057721:CDS | 50.0% | |
| TTACGGTGATCGTGGCGATA+GGG | - | chr4.4:35952765-35952784 | MS.gene057721:CDS | 50.0% | |
| TTGGTCCAAACCAGGTGCAT+GGG | - | chr4.4:35952462-35952481 | MS.gene057721:CDS | 50.0% | |
| TTTGAGAGAAGGGAGAGAGG+TGG | - | chr4.4:35952967-35952986 | MS.gene057721:CDS | 50.0% | |
| ! | CAAATCCGTTTGGTGAGGCA+AGG | - | chr4.4:35953361-35953380 | MS.gene057721:CDS | 50.0% |
| ! | CCAAACGGATTTGCACCCTT+AGG | + | chr4.4:35953354-35953373 | None:intergenic | 50.0% |
| ! | CCTAAGGGTGCAAATCCGTT+TGG | - | chr4.4:35953351-35953370 | MS.gene057721:CDS | 50.0% |
| ! | GGCTGATGGATCGGATAGTT+GGG | - | chr4.4:35953023-35953042 | MS.gene057721:CDS | 50.0% |
| ! | GGTTTCGAGTAAGGTGCCAT+CGG | - | chr4.4:35953044-35953063 | MS.gene057721:CDS | 50.0% |
| ! | TGTTAGTGGTGGTGCGGATT+CGG | - | chr4.4:35953137-35953156 | MS.gene057721:CDS | 50.0% |
| ! | TTCGAGATGGGGTTCTGGTT+CGG | - | chr4.4:35952816-35952835 | MS.gene057721:CDS | 50.0% |
| !! | AATGTTGGTAACGGCAGTGG+TGG | - | chr4.4:35953213-35953232 | MS.gene057721:CDS | 50.0% |
| !! | GAGAATGTTGGTAACGGCAG+TGG | - | chr4.4:35953210-35953229 | MS.gene057721:CDS | 50.0% |
| !! | GGTTCTAGGGTTTCTGAGGA+TGG | - | chr4.4:35952838-35952857 | MS.gene057721:CDS | 50.0% |
| !! | GTAGGGTTTGGTGTTAGTGG+TGG | - | chr4.4:35953126-35953145 | MS.gene057721:CDS | 50.0% |
| !! | GTGTTGGTGGTGGGTTTGAT+AGG | - | chr4.4:35953094-35953113 | MS.gene057721:CDS | 50.0% |
| !! | GTTTGGTGTTAGTGGTGGTG+CGG | - | chr4.4:35953131-35953150 | MS.gene057721:CDS | 50.0% |
| !! | TTCGGGTTCTAGGGTTTCTG+AGG | - | chr4.4:35952834-35952853 | MS.gene057721:CDS | 50.0% |
| !! | TTTGGTTCTGGTGGTGGTGT+TGG | - | chr4.4:35953078-35953097 | MS.gene057721:CDS | 50.0% |
| !!! | AGGGGTTTTGGTTCTGGCAA+TGG | - | chr4.4:35953492-35953511 | MS.gene057721:CDS | 50.0% |
| !!! | GAGCAGGTTTTGGCTGAGAA+AGG | - | chr4.4:35953390-35953409 | MS.gene057721:CDS | 50.0% |
| !!! | GGAAAGAGGGGTTTTGGTTC+TGG | - | chr4.4:35953486-35953505 | MS.gene057721:CDS | 50.0% |
| !!! | GGGGTTTTGGTTCTGGCAAT+GGG | - | chr4.4:35953493-35953512 | MS.gene057721:CDS | 50.0% |
| !!! | GGTTTTGGCTGAGAAAGGTC+AGG | - | chr4.4:35953395-35953414 | MS.gene057721:CDS | 50.0% |
| AACTTGAACGGGACCGGACT+AGG | - | chr4.4:35952722-35952741 | MS.gene057721:CDS | 55.0% | |
| AAGTGCCCATGCACCTGGTT+TGG | + | chr4.4:35952470-35952489 | None:intergenic | 55.0% | |
| AGGATGGGAGAAGGAATGGG+AGG | - | chr4.4:35952854-35952873 | MS.gene057721:CDS | 55.0% | |
| AGGGAAGGGAATTCCGCAAG+TGG | + | chr4.4:35952559-35952578 | None:intergenic | 55.0% | |
| CTGAGGAACTTGAACGGGAC+CGG | - | chr4.4:35952716-35952735 | MS.gene057721:CDS | 55.0% | |
| CTTACGGTGATCGTGGCGAT+AGG | - | chr4.4:35952764-35952783 | MS.gene057721:CDS | 55.0% | |
| CTTGGTCCAAACCAGGTGCA+TGG | - | chr4.4:35952461-35952480 | MS.gene057721:CDS | 55.0% | |
| GAATCAAGTGCCCATGCACC+TGG | + | chr4.4:35952475-35952494 | None:intergenic | 55.0% | |
| GATCCGGTTGATCTTCCCAC+CGG | - | chr4.4:35952676-35952695 | MS.gene057721:CDS | 55.0% | |
| GCTGGGAAGAAGGCTGTTGT+TGG | - | chr4.4:35952937-35952956 | MS.gene057721:CDS | 55.0% | |
| GGATGGGAGAAGGAATGGGA+GGG | - | chr4.4:35952855-35952874 | MS.gene057721:CDS | 55.0% | |
| GGGTTTGAGAGAAGGGAGAG+AGG | - | chr4.4:35952964-35952983 | MS.gene057721:CDS | 55.0% | |
| TCAGCCAAAACCTGCTCCCT+TGG | + | chr4.4:35953387-35953406 | None:intergenic | 55.0% | |
| TGGCGGCTACTGTATCTGCT+TGG | - | chr4.4:35952443-35952462 | MS.gene057721:CDS | 55.0% | |
| TTTGCAACCACGAACAGCGC+CGG | - | chr4.4:35953257-35953276 | MS.gene057721:CDS | 55.0% | |
| ! | AAGGCCAAGGGAGCAGGTTT+TGG | - | chr4.4:35953380-35953399 | MS.gene057721:CDS | 55.0% |
| ! | GAGGGACGGAGATTTGGTTC+TGG | - | chr4.4:35953066-35953085 | MS.gene057721:CDS | 55.0% |
| ! | GGGCTGATGGATCGGATAGT+TGG | - | chr4.4:35953022-35953041 | MS.gene057721:CDS | 55.0% |
| ! | GGGTGCAAATCCGTTTGGTG+AGG | - | chr4.4:35953356-35953375 | MS.gene057721:CDS | 55.0% |
| ! | GGGTTTCTGAGGATGGGAGA+AGG | - | chr4.4:35952845-35952864 | MS.gene057721:CDS | 55.0% |
| ! | GTCCCGTTCAAGTTCCTCAG+CGG | + | chr4.4:35952716-35952735 | None:intergenic | 55.0% |
| ! | GTTTGGTGAGGCAAGGCCAA+GGG | - | chr4.4:35953368-35953387 | MS.gene057721:CDS | 55.0% |
| ! | TCGAGTAAGGTGCCATCGGA+GGG | - | chr4.4:35953048-35953067 | MS.gene057721:CDS | 55.0% |
| ! | TTCGAGTAAGGTGCCATCGG+AGG | - | chr4.4:35953047-35953066 | MS.gene057721:CDS | 55.0% |
| !! | CGGAGATTTGGTTCTGGTGG+TGG | - | chr4.4:35953072-35953091 | MS.gene057721:CDS | 55.0% |
| !! | CTTGGCCTTGCCTCACCAAA+CGG | + | chr4.4:35953369-35953388 | None:intergenic | 55.0% |
| !! | GGACGGAGATTTGGTTCTGG+TGG | - | chr4.4:35953069-35953088 | MS.gene057721:CDS | 55.0% |
| !! | GGGTTCTGGTTCGGGTTCTA+GGG | - | chr4.4:35952825-35952844 | MS.gene057721:CDS | 55.0% |
| !! | GTGGTGGGTTTGATAGGGAG+AGG | - | chr4.4:35953100-35953119 | MS.gene057721:CDS | 55.0% |
| !! | TCGAGATGGGGTTCTGGTTC+GGG | - | chr4.4:35952817-35952836 | MS.gene057721:CDS | 55.0% |
| !! | TTTGGTTCTGGCAATGGGCG+TGG | - | chr4.4:35953498-35953517 | MS.gene057721:CDS | 55.0% |
| AGAAGGGAGAGAGGTGGAGG+TGG | - | chr4.4:35952973-35952992 | MS.gene057721:CDS | 60.0% | |
| AGAGAGGTGGAGGTGGAGGT+GGG | - | chr4.4:35952980-35952999 | MS.gene057721:CDS | 60.0% | |
| CCAAATCTCCGTCCCTCCGA+TGG | + | chr4.4:35953063-35953082 | None:intergenic | 60.0% | |
| CCATCGGAGGGACGGAGATT+TGG | - | chr4.4:35953060-35953079 | MS.gene057721:CDS | 60.0% | |
| GAGAGAAGGGAGAGAGGTGG+AGG | - | chr4.4:35952970-35952989 | MS.gene057721:CDS | 60.0% | |
| GGACCGGTGGGAAGATCAAC+CGG | + | chr4.4:35952682-35952701 | None:intergenic | 60.0% | |
| GTGATCGTGGCGATAGGGAC+AGG | - | chr4.4:35952770-35952789 | MS.gene057721:CDS | 60.0% | |
| GTGGCGATAGGGACAGGACA+AGG | - | chr4.4:35952776-35952795 | MS.gene057721:CDS | 60.0% | |
| TTACTCACCGGCGCTGTTCG+TGG | + | chr4.4:35953267-35953286 | None:intergenic | 60.0% | |
| ! | CGTTTGGTGAGGCAAGGCCA+AGG | - | chr4.4:35953367-35953386 | MS.gene057721:CDS | 60.0% |
| ! | GAACGGGACCGGACTAGGAT+TGG | - | chr4.4:35952727-35952746 | MS.gene057721:CDS | 60.0% |
| ! | GACCGGACTAGGATTGGTGG+TGG | - | chr4.4:35952733-35952752 | MS.gene057721:CDS | 60.0% |
| ! | GATTCGCAGTCACGGGCTGA+TGG | - | chr4.4:35953009-35953028 | MS.gene057721:CDS | 60.0% |
| ! | GCAGTCACGGGCTGATGGAT+CGG | - | chr4.4:35953014-35953033 | MS.gene057721:CDS | 60.0% |
| ! | GTAAGGTGCCATCGGAGGGA+CGG | - | chr4.4:35953052-35953071 | MS.gene057721:CDS | 60.0% |
| !! | CTGGTGGTGGTGTTGGTGGT+GGG | - | chr4.4:35953085-35953104 | MS.gene057721:CDS | 60.0% |
| !! | GGGGTTCTGGTTCGGGTTCT+AGG | - | chr4.4:35952824-35952843 | MS.gene057721:CDS | 60.0% |
| !! | GGTTCTGGTGGTGGTGTTGG+TGG | - | chr4.4:35953081-35953100 | MS.gene057721:CDS | 60.0% |
| !! | GTTGGTAACGGCAGTGGTGG+TGG | - | chr4.4:35953216-35953235 | MS.gene057721:CDS | 60.0% |
| !! | TCTGGTGGTGGTGTTGGTGG+TGG | - | chr4.4:35953084-35953103 | MS.gene057721:CDS | 60.0% |
| AGCGGTTCGCTGACGTGGAC+CGG | + | chr4.4:35952698-35952717 | None:intergenic | 65.0% | |
| AGGGAGAGAGGTGGAGGTGG+AGG | - | chr4.4:35952976-35952995 | MS.gene057721:CDS | 65.0% | |
| GAGAGAGGTGGAGGTGGAGG+TGG | - | chr4.4:35952979-35952998 | MS.gene057721:CDS | 65.0% | |
| GTTCGCTGACGTGGACCGGT+GGG | + | chr4.4:35952694-35952713 | None:intergenic | 65.0% | |
| TCCACGTCAGCGAACCGCTG+AGG | - | chr4.4:35952699-35952718 | MS.gene057721:CDS | 65.0% | |
| TCCTCAGCGGTTCGCTGACG+TGG | + | chr4.4:35952703-35952722 | None:intergenic | 65.0% | |
| TGAGGCAAGGCCAAGGGAGC+AGG | - | chr4.4:35953374-35953393 | MS.gene057721:CDS | 65.0% | |
| TGTTGCGGCGGCAACAGCGA+GGG | + | chr4.4:35952578-35952597 | None:intergenic | 65.0% | |
| TTGTTGCGGCGGCAACAGCG+AGG | + | chr4.4:35952579-35952598 | None:intergenic | 65.0% | |
| ! | CGGGACCGGACTAGGATTGG+TGG | - | chr4.4:35952730-35952749 | MS.gene057721:CDS | 65.0% |
| ! | TCGTGATTCGGGGCCGTCGA+GGG | - | chr4.4:35952891-35952910 | MS.gene057721:CDS | 65.0% |
| !! | ACGGCAGTGGTGGTGGTGGA+AGG | - | chr4.4:35953223-35953242 | MS.gene057721:CDS | 65.0% |
| !! | GGTAACGGCAGTGGTGGTGG+TGG | - | chr4.4:35953219-35953238 | MS.gene057721:CDS | 65.0% |
| !! | GTGGTGGTGGTGGAAGGCCT+AGG | - | chr4.4:35953229-35953248 | MS.gene057721:CDS | 65.0% |
| CGGCGGCAACAGCGAGGGAA+GGG | + | chr4.4:35952573-35952592 | None:intergenic | 70.0% | |
| GGTTCGCTGACGTGGACCGG+TGG | + | chr4.4:35952695-35952714 | None:intergenic | 70.0% | |
| ! | GTCGTGATTCGGGGCCGTCG+AGG | - | chr4.4:35952890-35952909 | MS.gene057721:CDS | 70.0% |
| GCGGCGGCAACAGCGAGGGA+AGG | + | chr4.4:35952574-35952593 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 35952442 | 35953626 | 35952442 | ID=MS.gene057721 |
| chr4.4 | mRNA | 35952442 | 35953626 | 35952442 | ID=MS.gene057721.t1;Parent=MS.gene057721 |
| chr4.4 | exon | 35952442 | 35953626 | 35952442 | ID=MS.gene057721.t1.exon1;Parent=MS.gene057721.t1 |
| chr4.4 | CDS | 35952442 | 35953626 | 35952442 | ID=cds.MS.gene057721.t1;Parent=MS.gene057721.t1 |
| Gene Sequence |
| Protein sequence |
