Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29719.t1 | XP_003616741.1 | 97.5 | 366 | 9 | 0 | 1 | 366 | 1 | 366 | 8.00E-159 | 570.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29719.t1 | O22892 | 41.2 | 444 | 180 | 5 | 1 | 366 | 1 | 441 | 8.0e-75 | 282.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29719.t1 | G7K7B9 | 97.5 | 366 | 9 | 0 | 1 | 366 | 1 | 366 | 5.8e-159 | 570.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049166 | MS.gene29719 | 0.855983 | 4.37E-62 | -1.69E-46 |
| MS.gene049756 | MS.gene29719 | 0.805239 | 1.47E-49 | -1.69E-46 |
| MS.gene050069 | MS.gene29719 | 0.829533 | 4.88E-55 | -1.69E-46 |
| MS.gene050085 | MS.gene29719 | 0.811664 | 6.25E-51 | -1.69E-46 |
| MS.gene050114 | MS.gene29719 | 0.872131 | 4.02E-67 | -1.69E-46 |
| MS.gene050277 | MS.gene29719 | 0.808676 | 2.75E-50 | -1.69E-46 |
| MS.gene050317 | MS.gene29719 | 0.863483 | 2.41E-64 | -1.69E-46 |
| MS.gene050654 | MS.gene29719 | 0.811705 | 6.12E-51 | -1.69E-46 |
| MS.gene050838 | MS.gene29719 | 0.840053 | 1.10E-57 | -1.69E-46 |
| MS.gene051003 | MS.gene29719 | 0.837004 | 6.71E-57 | -1.69E-46 |
| MS.gene051245 | MS.gene29719 | 0.813584 | 2.38E-51 | -1.69E-46 |
| MS.gene051343 | MS.gene29719 | 0.816096 | 6.59E-52 | -1.69E-46 |
| MS.gene051451 | MS.gene29719 | 0.807342 | 5.30E-50 | -1.69E-46 |
| MS.gene051676 | MS.gene29719 | 0.801898 | 7.25E-49 | -1.69E-46 |
| MS.gene051746 | MS.gene29719 | 0.826119 | 3.23E-54 | -1.69E-46 |
| MS.gene051748 | MS.gene29719 | 0.840615 | 7.82E-58 | -1.69E-46 |
| MS.gene051756 | MS.gene29719 | 0.800169 | 1.64E-48 | -1.69E-46 |
| MS.gene051757 | MS.gene29719 | 0.816281 | 6.00E-52 | -1.69E-46 |
| MS.gene05188 | MS.gene29719 | 0.860155 | 2.52E-63 | -1.69E-46 |
| MS.gene051903 | MS.gene29719 | 0.817267 | 3.60E-52 | -1.69E-46 |
| MS.gene051975 | MS.gene29719 | 0.853356 | 2.52E-61 | -1.69E-46 |
| MS.gene052342 | MS.gene29719 | 0.82392 | 1.07E-53 | -1.69E-46 |
| MS.gene052434 | MS.gene29719 | 0.866348 | 3.05E-65 | -1.69E-46 |
| MS.gene052947 | MS.gene29719 | 0.803682 | 3.10E-49 | -1.69E-46 |
| MS.gene053058 | MS.gene29719 | 0.863128 | 3.11E-64 | -1.69E-46 |
| MS.gene053109 | MS.gene29719 | 0.834212 | 3.41E-56 | -1.69E-46 |
| MS.gene053381 | MS.gene29719 | 0.868041 | 8.77E-66 | -1.69E-46 |
| MS.gene053564 | MS.gene29719 | 0.812173 | 4.84E-51 | -1.69E-46 |
| MS.gene053786 | MS.gene29719 | 0.822724 | 2.03E-53 | -1.69E-46 |
| MS.gene053895 | MS.gene29719 | -0.829256 | 5.70E-55 | -1.69E-46 |
| MS.gene053952 | MS.gene29719 | 0.828314 | 9.63E-55 | -1.69E-46 |
| MS.gene05517 | MS.gene29719 | 0.807083 | 6.01E-50 | -1.69E-46 |
| MS.gene055311 | MS.gene29719 | 0.842595 | 2.35E-58 | -1.69E-46 |
| MS.gene055313 | MS.gene29719 | 0.820704 | 5.96E-53 | -1.69E-46 |
| MS.gene055314 | MS.gene29719 | 0.824026 | 1.01E-53 | -1.69E-46 |
| MS.gene055424 | MS.gene29719 | 0.824081 | 9.79E-54 | -1.69E-46 |
| MS.gene055441 | MS.gene29719 | 0.802716 | 4.92E-49 | -1.69E-46 |
| MS.gene055513 | MS.gene29719 | 0.827108 | 1.88E-54 | -1.69E-46 |
| MS.gene055603 | MS.gene29719 | 0.842182 | 3.02E-58 | -1.69E-46 |
| MS.gene056097 | MS.gene29719 | 0.800518 | 1.39E-48 | -1.69E-46 |
| MS.gene056181 | MS.gene29719 | 0.838979 | 2.08E-57 | -1.69E-46 |
| MS.gene056403 | MS.gene29719 | 0.88035 | 5.90E-70 | -1.69E-46 |
| MS.gene056432 | MS.gene29719 | 0.803643 | 3.16E-49 | -1.69E-46 |
| MS.gene056552 | MS.gene29719 | 0.80551 | 1.29E-49 | -1.69E-46 |
| MS.gene056605 | MS.gene29719 | 0.89057 | 8.74E-74 | -1.69E-46 |
| MS.gene056631 | MS.gene29719 | 0.816602 | 5.08E-52 | -1.69E-46 |
| MS.gene056638 | MS.gene29719 | 0.804947 | 1.69E-49 | -1.69E-46 |
| MS.gene056752 | MS.gene29719 | 0.810336 | 1.21E-50 | -1.69E-46 |
| MS.gene056787 | MS.gene29719 | 0.848054 | 7.82E-60 | -1.69E-46 |
| MS.gene056986 | MS.gene29719 | 0.857321 | 1.77E-62 | -1.69E-46 |
| MS.gene056992 | MS.gene29719 | 0.832461 | 9.33E-56 | -1.69E-46 |
| MS.gene057094 | MS.gene29719 | 0.884032 | 2.71E-71 | -1.69E-46 |
| MS.gene057140 | MS.gene29719 | 0.805342 | 1.40E-49 | -1.69E-46 |
| MS.gene057234 | MS.gene29719 | 0.815891 | 7.33E-52 | -1.69E-46 |
| MS.gene057360 | MS.gene29719 | 0.822889 | 1.86E-53 | -1.69E-46 |
| MS.gene057721 | MS.gene29719 | 0.814983 | 1.17E-51 | -1.69E-46 |
| MS.gene05781 | MS.gene29719 | 0.838061 | 3.60E-57 | -1.69E-46 |
| MS.gene057999 | MS.gene29719 | 0.819593 | 1.07E-52 | -1.69E-46 |
| MS.gene058126 | MS.gene29719 | 0.815614 | 8.45E-52 | -1.69E-46 |
| MS.gene058238 | MS.gene29719 | 0.840031 | 1.11E-57 | -1.69E-46 |
| MS.gene058646 | MS.gene29719 | 0.802643 | 5.09E-49 | -1.69E-46 |
| MS.gene058654 | MS.gene29719 | 0.81499 | 1.16E-51 | -1.69E-46 |
| MS.gene058758 | MS.gene29719 | 0.820045 | 8.44E-53 | -1.69E-46 |
| MS.gene05880 | MS.gene29719 | 0.812398 | 4.32E-51 | -1.69E-46 |
| MS.gene058906 | MS.gene29719 | 0.806124 | 9.58E-50 | -1.69E-46 |
| MS.gene059050 | MS.gene29719 | 0.812085 | 5.06E-51 | -1.69E-46 |
| MS.gene059146 | MS.gene29719 | 0.835351 | 1.76E-56 | -1.69E-46 |
| MS.gene059360 | MS.gene29719 | 0.845162 | 4.82E-59 | -1.69E-46 |
| MS.gene059830 | MS.gene29719 | 0.852109 | 5.73E-61 | -1.69E-46 |
| MS.gene06001 | MS.gene29719 | 0.839799 | 1.28E-57 | -1.69E-46 |
| MS.gene06010 | MS.gene29719 | 0.856871 | 2.40E-62 | -1.69E-46 |
| MS.gene06011 | MS.gene29719 | 0.893991 | 3.75E-75 | -1.69E-46 |
| MS.gene060296 | MS.gene29719 | 0.82422 | 9.08E-54 | -1.69E-46 |
| MS.gene060465 | MS.gene29719 | 0.801226 | 9.95E-49 | -1.69E-46 |
| MS.gene060586 | MS.gene29719 | 0.818228 | 2.19E-52 | -1.69E-46 |
| MS.gene060637 | MS.gene29719 | 0.803124 | 4.05E-49 | -1.69E-46 |
| MS.gene060763 | MS.gene29719 | 0.861199 | 1.21E-63 | -1.69E-46 |
| MS.gene060830 | MS.gene29719 | 0.845906 | 3.03E-59 | -1.69E-46 |
| MS.gene060869 | MS.gene29719 | 0.836843 | 7.38E-57 | -1.69E-46 |
| MS.gene060870 | MS.gene29719 | 0.834968 | 2.20E-56 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29719.t1 | MTR_5g083780 | 98.634 | 366 | 5 | 0 | 1 | 366 | 1 | 366 | 0.0 | 724 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29719.t1 | AT2G40430 | 55.319 | 235 | 97 | 4 | 1 | 234 | 1 | 228 | 1.15e-69 | 226 |
| MS.gene29719.t1 | AT2G40430 | 53.704 | 162 | 74 | 1 | 199 | 360 | 275 | 435 | 1.79e-40 | 149 |
| MS.gene29719.t1 | AT2G40430 | 54.217 | 249 | 105 | 5 | 1 | 248 | 1 | 241 | 1.45e-69 | 226 |
| MS.gene29719.t1 | AT2G40430 | 51.977 | 177 | 81 | 2 | 199 | 375 | 275 | 447 | 5.39e-42 | 153 |
| MS.gene29719.t1 | AT2G40430 | 53.704 | 162 | 74 | 1 | 199 | 360 | 126 | 286 | 1.08e-41 | 149 |
| MS.gene29719.t1 | AT2G40430 | 73.563 | 87 | 23 | 0 | 1 | 87 | 1 | 87 | 1.46e-34 | 129 |
Find 72 sgRNAs with CRISPR-Local
Find 228 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAACAAAAGACGCTCTTTC+TGG | 0.212843 | 5.3:-67902241 | MS.gene29719:CDS |
| ACAGTTAAAGGCACCGGTTC+AGG | 0.249592 | 5.3:+67900182 | None:intergenic |
| AACCTATTCCTCCTGGGTTT+TGG | 0.258900 | 5.3:+67898758 | None:intergenic |
| TTCATTGGCGACTAAACTTT+TGG | 0.280238 | 5.3:+67900909 | None:intergenic |
| TAAAGTCTACAGAAATGAAT+TGG | 0.292665 | 5.3:-67900207 | MS.gene29719:CDS |
| TCTCCAGCAGGAACAGTTAA+AGG | 0.308159 | 5.3:+67900170 | None:intergenic |
| CATGAATGTGGAGCGAAGTT+AGG | 0.313273 | 5.3:+67898149 | None:intergenic |
| TTATTAAGCGAAGAGATAAA+TGG | 0.314835 | 5.3:-67898979 | MS.gene29719:CDS |
| CTAACTTCGCTCCACATTCA+TGG | 0.346918 | 5.3:-67898148 | MS.gene29719:CDS |
| AAGTGTCTACCTTAAGCTTT+CGG | 0.364930 | 5.3:+67898950 | None:intergenic |
| AGGCAACAAGAAAGTGAAAA+AGG | 0.370426 | 5.3:-67900574 | MS.gene29719:intron |
| TTTGATATGTGGGGTGATAA+AGG | 0.381349 | 5.3:-67900684 | MS.gene29719:intron |
| TCGCTTAATAAAACTTGAAC+AGG | 0.391740 | 5.3:+67898991 | None:intergenic |
| TGCTAAACAAGAGAGGTTAA+AGG | 0.397687 | 5.3:-67899195 | MS.gene29719:CDS |
| TTGAGTTGAATAAGAGAATT+CGG | 0.399925 | 5.3:-67899448 | MS.gene29719:CDS |
| TGGATCCATCCGAAAGCTTA+AGG | 0.404582 | 5.3:-67898959 | MS.gene29719:intron |
| TTCCAAAACCCAGGAGGAAT+AGG | 0.410228 | 5.3:-67898760 | MS.gene29719:intron |
| AAATGAATTGGGCCCTGAAC+CGG | 0.418925 | 5.3:-67900195 | MS.gene29719:CDS |
| ATTCTGACGTATTTGATATG+TGG | 0.431247 | 5.3:-67900695 | MS.gene29719:CDS |
| AAGGCACTGGCTTAACAAAC+TGG | 0.432795 | 5.3:+67900974 | None:intergenic |
| GGGTTGTTGCACACTTCTAA+AGG | 0.437307 | 5.3:-67898819 | MS.gene29719:CDS |
| CACATTCATGGCTCGATATG+TGG | 0.459538 | 5.3:-67898136 | MS.gene29719:CDS |
| CGCCAATGAAAATATTCATA+AGG | 0.466327 | 5.3:-67900896 | MS.gene29719:intron |
| GGAGGATCAACCTCGACAGC+TGG | 0.470903 | 5.3:+67900400 | None:intergenic |
| ATGAATGTGGAGCGAAGTTA+GGG | 0.472331 | 5.3:+67898150 | None:intergenic |
| AAAGTCTACAGAAATGAATT+GGG | 0.481927 | 5.3:-67900206 | MS.gene29719:CDS |
| TCAGAAATAGCTTCTCCAGC+AGG | 0.486553 | 5.3:+67900158 | None:intergenic |
| AAGGCATGTCCTCCTCGCTT+AGG | 0.491146 | 5.3:-67899176 | MS.gene29719:CDS |
| TTAAACTAACCTATTCCTCC+TGG | 0.497216 | 5.3:+67898751 | None:intergenic |
| GTCTACCTTAAGCTTTCGGA+TGG | 0.500501 | 5.3:+67898954 | None:intergenic |
| CAGTTAAAGGCACCGGTTCA+GGG | 0.505603 | 5.3:+67900183 | None:intergenic |
| GGAAGAAATCGAAAAGTTCA+AGG | 0.508630 | 5.3:-67902327 | MS.gene29719:CDS |
| GTGCCTTTAACTGTTCCTGC+TGG | 0.514168 | 5.3:-67900173 | MS.gene29719:CDS |
| AATAAAACTTGAACAGGAGC+AGG | 0.514471 | 5.3:+67898997 | None:intergenic |
| TTCTGACGTATTTGATATGT+GGG | 0.515220 | 5.3:-67900694 | MS.gene29719:CDS |
| ACCTGATGACTTTCATGCGT+GGG | 0.529893 | 5.3:+67900361 | None:intergenic |
| GAAATCGAAAAGTTCAAGGA+AGG | 0.532332 | 5.3:-67902323 | MS.gene29719:CDS |
| CGAAGTTAGGGAAGAAAACA+AGG | 0.536081 | 5.3:+67898162 | None:intergenic |
| TAAACTAACCTATTCCTCCT+GGG | 0.538566 | 5.3:+67898752 | None:intergenic |
| TGTCATGCAGACGCAGATGA+AGG | 0.540396 | 5.3:-67900594 | MS.gene29719:intron |
| TCCCACGCATGAAAGTCATC+AGG | 0.540481 | 5.3:-67900362 | MS.gene29719:intron |
| TAGGGAAGAAAACAAGGAAG+AGG | 0.542792 | 5.3:+67898168 | None:intergenic |
| TGTTTCTTTAGAGTAGATGA+AGG | 0.544003 | 5.3:+67900955 | None:intergenic |
| TACTTGTGCTTTCCTAAGCG+AGG | 0.545713 | 5.3:+67899164 | None:intergenic |
| TTTAGAGTAGATGAAGGCAC+TGG | 0.552068 | 5.3:+67900961 | None:intergenic |
| TACATTAGCTACTGCTGTTG+CGG | 0.553793 | 5.3:-67900240 | MS.gene29719:CDS |
| CAAGGAAGGGTAAGAAAGCA+TGG | 0.557013 | 5.3:-67902309 | MS.gene29719:CDS |
| GTATAAAAGCATAGAGAAGA+GGG | 0.558222 | 5.3:-67898792 | MS.gene29719:CDS |
| GCTGTCGAGGTTGATCCTCC+AGG | 0.559631 | 5.3:-67900397 | MS.gene29719:CDS |
| GGAAATTAATCATGAAGATG+AGG | 0.560652 | 5.3:-67899249 | MS.gene29719:CDS |
| GGTTGGTTGTTCCAAAACCC+AGG | 0.577115 | 5.3:-67898769 | MS.gene29719:CDS |
| TACTCATATTCCAGCTGTCG+AGG | 0.579607 | 5.3:-67900410 | MS.gene29719:CDS |
| TTTGATGTGGCTAGATCTTG+CGG | 0.583564 | 5.3:-67901061 | MS.gene29719:intron |
| GCAGGAACAGTTAAAGGCAC+CGG | 0.584872 | 5.3:+67900176 | None:intergenic |
| GTTGCACACTTCTAAAGGAT+CGG | 0.588324 | 5.3:-67898814 | MS.gene29719:CDS |
| GGTATAAAAGCATAGAGAAG+AGG | 0.597174 | 5.3:-67898793 | MS.gene29719:CDS |
| GAAAGTAATCACGAAGATGA+TGG | 0.598830 | 5.3:-67899948 | MS.gene29719:CDS |
| TCGACAGCTGGAATATGAGT+AGG | 0.600011 | 5.3:+67900412 | None:intergenic |
| ACAAAAGACGCTCTTTCTGG+TGG | 0.605132 | 5.3:-67902238 | MS.gene29719:CDS |
| AAATCGAAAAGTTCAAGGAA+GGG | 0.615075 | 5.3:-67902322 | MS.gene29719:CDS |
| TATAAAAGCATAGAGAAGAG+GGG | 0.615122 | 5.3:-67898791 | MS.gene29719:CDS |
| TACCTGATGACTTTCATGCG+TGG | 0.622306 | 5.3:+67900360 | None:intergenic |
| GTGGGATTAAATGAGCATCC+TGG | 0.648369 | 5.3:+67900379 | None:intergenic |
| TTGTGCTTTCCTAAGCGAGG+AGG | 0.655472 | 5.3:+67899167 | None:intergenic |
| CACATATCGAGCCATGAATG+TGG | 0.657958 | 5.3:+67898137 | None:intergenic |
| ATAAAAGCATAGAGAAGAGG+GGG | 0.668542 | 5.3:-67898790 | MS.gene29719:CDS |
| TATGTGGCAAGAAGACGTGA+TGG | 0.672402 | 5.3:-67898120 | MS.gene29719:CDS |
| GACAAGTTGCTAAACAAGAG+AGG | 0.673783 | 5.3:-67899202 | MS.gene29719:CDS |
| GGATTAAATGAGCATCCTGG+AGG | 0.690842 | 5.3:+67900382 | None:intergenic |
| TGGTTGTTCCAAAACCCAGG+AGG | 0.713845 | 5.3:-67898766 | MS.gene29719:CDS |
| AAATACGTCAGAATCTAACA+CGG | 0.731068 | 5.3:+67900704 | None:intergenic |
| TCTGACGTATTTGATATGTG+GGG | 0.759234 | 5.3:-67900693 | MS.gene29719:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTTTTTTAATATTAATT+TGG | - | chr5.3:67901897-67901916 | MS.gene29719:intron | 0.0% |
| !! | CCAAAATAAATAAATAAAAA+TGG | + | chr5.3:67898292-67898311 | None:intergenic | 10.0% |
| !!! | AATAAAACAAATTTTAAAAG+AGG | + | chr5.3:67899684-67899703 | None:intergenic | 10.0% |
| !!! | AATTTATTTTAAATTTGATG+TGG | - | chr5.3:67899369-67899388 | MS.gene29719:intron | 10.0% |
| !!! | CCATTTTTATTTATTTATTT+TGG | - | chr5.3:67898289-67898308 | MS.gene29719:intron | 10.0% |
| !!! | GTGTATAAATTTTTATTTTA+TGG | - | chr5.3:67900734-67900753 | MS.gene29719:intron | 10.0% |
| !!! | TATTTTATTTTTTCAAAACA+AGG | - | chr5.3:67898885-67898904 | MS.gene29719:intron | 10.0% |
| !! | TTAAAATAAATTCAAATCCA+AGG | + | chr5.3:67899361-67899380 | None:intergenic | 15.0% |
| !! | TTACTTACAAATATATTAAG+TGG | + | chr5.3:67900861-67900880 | None:intergenic | 15.0% |
| !!! | GTTAAAATTCATTTTCTTTT+AGG | - | chr5.3:67898925-67898944 | MS.gene29719:intron | 15.0% |
| !!! | TTATTTTGTTTAGAGAAAAA+TGG | - | chr5.3:67901766-67901785 | MS.gene29719:intron | 15.0% |
| !! | AAATATGGAAACAAATTCAT+AGG | + | chr5.3:67900361-67900380 | None:intergenic | 20.0% |
| !! | ATTCAACGAAATATACAATA+TGG | + | chr5.3:67902194-67902213 | None:intergenic | 20.0% |
| !! | CTAAATAATAATATGCTTAG+TGG | - | chr5.3:67899597-67899616 | MS.gene29719:intron | 20.0% |
| !! | CTTCTTTAATAATCTATATC+AGG | - | chr5.3:67899710-67899729 | MS.gene29719:intron | 20.0% |
| !! | GAAAACACATCAATTATAAT+AGG | + | chr5.3:67899177-67899196 | None:intergenic | 20.0% |
| !! | TTTAATAATCTATATCAGGA+GGG | - | chr5.3:67899714-67899733 | MS.gene29719:intron | 20.0% |
| !!! | AAATTAGTCTAAAAAAAAGC+AGG | + | chr5.3:67901577-67901596 | None:intergenic | 20.0% |
| !!! | AATTAGTCTAAAAAAAAGCA+GGG | + | chr5.3:67901576-67901595 | None:intergenic | 20.0% |
| !!! | AGTGGTAATTTTAAAAAACT+TGG | - | chr5.3:67901943-67901962 | MS.gene29719:intron | 20.0% |
| !!! | CATAAGTTGTTTTAGTTTTA+GGG | - | chr5.3:67898703-67898722 | MS.gene29719:intron | 20.0% |
| !!! | GTAACACAATCTTTTTTTTT+AGG | - | chr5.3:67898972-67898991 | MS.gene29719:CDS | 20.0% |
| !!! | TCATAAGTTGTTTTAGTTTT+AGG | - | chr5.3:67898702-67898721 | MS.gene29719:intron | 20.0% |
| !!! | TTAAATACTTTCTTTTTTGC+CGG | - | chr5.3:67900583-67900602 | MS.gene29719:CDS | 20.0% |
| !!! | TTTATTTTTTCAAAACAAGG+AGG | - | chr5.3:67898888-67898907 | MS.gene29719:intron | 20.0% |
| !!! | TTTTCTCAAAAGAAATTGAT+AGG | - | chr5.3:67901064-67901083 | MS.gene29719:intron | 20.0% |
| !!! | TTTTTAGTTTTAGGTTTGTT+TGG | - | chr5.3:67898383-67898402 | MS.gene29719:intron | 20.0% |
| ! | AAACGTAATTGTTGTAGAAA+TGG | + | chr5.3:67901389-67901408 | None:intergenic | 25.0% |
| ! | AAAGTCTACAGAAATGAATT+GGG | - | chr5.3:67900237-67900256 | MS.gene29719:CDS | 25.0% |
| ! | AACGAAATATACAATATGGA+AGG | + | chr5.3:67902190-67902209 | None:intergenic | 25.0% |
| ! | AAGAACTTTATTGTTTAACC+AGG | - | chr5.3:67900179-67900198 | MS.gene29719:CDS | 25.0% |
| ! | ACATAAACTTGTACGAAAAA+TGG | - | chr5.3:67899205-67899224 | MS.gene29719:CDS | 25.0% |
| ! | AGCTTATGAAAACAACTTAT+AGG | - | chr5.3:67899042-67899061 | MS.gene29719:intron | 25.0% |
| ! | ATCAATGAAAAAGTGAATTC+TGG | + | chr5.3:67899338-67899357 | None:intergenic | 25.0% |
| ! | ATTAAGCTGTTTATTCAAAC+AGG | - | chr5.3:67899118-67899137 | MS.gene29719:intron | 25.0% |
| ! | ATTATATGCTTGCAATTAGT+TGG | - | chr5.3:67901800-67901819 | MS.gene29719:intron | 25.0% |
| ! | ATTATGGTTATGCATTATAC+AGG | - | chr5.3:67902246-67902265 | MS.gene29719:CDS | 25.0% |
| ! | CAATTACATAAGCTTGTATA+TGG | - | chr5.3:67898354-67898373 | MS.gene29719:intron | 25.0% |
| ! | CTCTATAAAGAAAAGCTATT+AGG | - | chr5.3:67898843-67898862 | MS.gene29719:intron | 25.0% |
| ! | CTTTAATAATCTATATCAGG+AGG | - | chr5.3:67899713-67899732 | MS.gene29719:intron | 25.0% |
| ! | GTACAAGTTTATGTAATTCA+TGG | + | chr5.3:67899199-67899218 | None:intergenic | 25.0% |
| ! | TAAAGTCTACAGAAATGAAT+TGG | - | chr5.3:67900236-67900255 | MS.gene29719:CDS | 25.0% |
| ! | TATGTTGGTGTACATAATTA+GGG | - | chr5.3:67901604-67901623 | MS.gene29719:intron | 25.0% |
| ! | TGCTTTCAAAAAAACAATAC+CGG | + | chr5.3:67900771-67900790 | None:intergenic | 25.0% |
| ! | TTAAGCTGTTTATTCAAACA+GGG | - | chr5.3:67899119-67899138 | MS.gene29719:intron | 25.0% |
| ! | TTATATGCTTGCAATTAGTT+GGG | - | chr5.3:67901801-67901820 | MS.gene29719:intron | 25.0% |
| ! | TTATGTTGGTGTACATAATT+AGG | - | chr5.3:67901603-67901622 | MS.gene29719:intron | 25.0% |
| ! | TTATTAAGCGAAGAGATAAA+TGG | - | chr5.3:67901464-67901483 | MS.gene29719:intron | 25.0% |
| !! | CTTAATTTCATTTTGAACAC+TGG | - | chr5.3:67900826-67900845 | MS.gene29719:intron | 25.0% |
| !! | GACCTTATGAATATTTTCAT+TGG | + | chr5.3:67899552-67899571 | None:intergenic | 25.0% |
| !! | GCAATATGATATTGTGTTTT+TGG | + | chr5.3:67902068-67902087 | None:intergenic | 25.0% |
| !! | TCTTGTTATGATTTATGATG+AGG | - | chr5.3:67900150-67900169 | MS.gene29719:intron | 25.0% |
| !! | TGTCTTTGATTTAGAATTTG+AGG | - | chr5.3:67902128-67902147 | MS.gene29719:intron | 25.0% |
| !!! | AAAGCATTTAGTATCCATTT+TGG | - | chr5.3:67899792-67899811 | MS.gene29719:intron | 25.0% |
| !!! | AGTCACTTTCTTTGTTTTAA+TGG | + | chr5.3:67900971-67900990 | None:intergenic | 25.0% |
| !!! | ATATTGTGTTTTTGGTTTTG+TGG | + | chr5.3:67902060-67902079 | None:intergenic | 25.0% |
| !!! | CATTTTTGAAGTGTTTGTTT+TGG | - | chr5.3:67898792-67898811 | MS.gene29719:CDS | 25.0% |
| !!! | GTCACTTTCTTTGTTTTAAT+GGG | + | chr5.3:67900970-67900989 | None:intergenic | 25.0% |
| !!! | TAGTATCCATTTTGGTTAAT+GGG | - | chr5.3:67899800-67899819 | MS.gene29719:intron | 25.0% |
| !!! | TATTGTGTTTTTGGTTTTGT+GGG | + | chr5.3:67902059-67902078 | None:intergenic | 25.0% |
| !!! | TGGAAAGTGTTTTTAGTTTT+AGG | - | chr5.3:67898374-67898393 | MS.gene29719:intron | 25.0% |
| !!! | TGTTATTTTTATGACCTGAT+TGG | + | chr5.3:67900618-67900637 | None:intergenic | 25.0% |
| !!! | TTAAAGTACTGATTGCATTA+TGG | - | chr5.3:67902230-67902249 | MS.gene29719:CDS | 25.0% |
| !!! | TTAGTATCCATTTTGGTTAA+TGG | - | chr5.3:67899799-67899818 | MS.gene29719:intron | 25.0% |
| !!! | TTGAGTTGAATAAGAGAATT+CGG | - | chr5.3:67900995-67901014 | MS.gene29719:CDS | 25.0% |
| !!! | TTTTATTTTAGTAGAGAGAG+AGG | + | chr5.3:67901119-67901138 | None:intergenic | 25.0% |
| AAATACGTCAGAATCTAACA+CGG | + | chr5.3:67899742-67899761 | None:intergenic | 30.0% | |
| AAATCGAAAAGTTCAAGGAA+GGG | - | chr5.3:67898121-67898140 | MS.gene29719:CDS | 30.0% | |
| AACTAATGGGAATAAGATCA+AGG | + | chr5.3:67899013-67899032 | None:intergenic | 30.0% | |
| AAGCTATCTTAGAGAACTAA+TGG | + | chr5.3:67899027-67899046 | None:intergenic | 30.0% | |
| AATGTGCAGCAACAATAAAA+TGG | + | chr5.3:67899937-67899956 | None:intergenic | 30.0% | |
| ACCAATTCCATTATTGTAAC+AGG | - | chr5.3:67901417-67901436 | MS.gene29719:intron | 30.0% | |
| ACTAATGGGAATAAGATCAA+GGG | + | chr5.3:67899012-67899031 | None:intergenic | 30.0% | |
| AGCTATCTTAGAGAACTAAT+GGG | + | chr5.3:67899026-67899045 | None:intergenic | 30.0% | |
| ATCAGATGTTTAGACATTAC+TGG | + | chr5.3:67900914-67900933 | None:intergenic | 30.0% | |
| ATTATGTACACCAACATAAG+TGG | + | chr5.3:67901602-67901621 | None:intergenic | 30.0% | |
| ATTCTGACGTATTTGATATG+TGG | - | chr5.3:67899748-67899767 | MS.gene29719:intron | 30.0% | |
| CACTTCAAAAATGACAAAAG+TGG | + | chr5.3:67898785-67898804 | None:intergenic | 30.0% | |
| CATTAACACAGGTATGATAA+GGG | + | chr5.3:67901322-67901341 | None:intergenic | 30.0% | |
| CGCCAATGAAAATATTCATA+AGG | - | chr5.3:67899547-67899566 | MS.gene29719:intron | 30.0% | |
| CTTATCATACCTGTGTTAAT+GGG | - | chr5.3:67901321-67901340 | MS.gene29719:intron | 30.0% | |
| GGAAATTAATCATGAAGATG+AGG | - | chr5.3:67901194-67901213 | MS.gene29719:intron | 30.0% | |
| GGTTGAAATTGATGTTTAAG+AGG | - | chr5.3:67901918-67901937 | MS.gene29719:intron | 30.0% | |
| GGTTTAAATTGAGTTTGAAG+TGG | - | chr5.3:67901964-67901983 | MS.gene29719:intron | 30.0% | |
| GTTAATGGGATGTTAACATT+AGG | - | chr5.3:67899814-67899833 | MS.gene29719:intron | 30.0% | |
| GTTTGCGATGAAAAGAAAAA+AGG | + | chr5.3:67899662-67899681 | None:intergenic | 30.0% | |
| TAAAAATGGGTACATACCTT+TGG | + | chr5.3:67898278-67898297 | None:intergenic | 30.0% | |
| TAACATCCCATTAACCAAAA+TGG | + | chr5.3:67899809-67899828 | None:intergenic | 30.0% | |
| TATATGCTTGCAATTAGTTG+GGG | - | chr5.3:67901802-67901821 | MS.gene29719:intron | 30.0% | |
| TATCAAGAGCTTCGTAAATA+TGG | + | chr5.3:67900376-67900395 | None:intergenic | 30.0% | |
| TCAGATGTTTAGACATTACT+GGG | + | chr5.3:67900913-67900932 | None:intergenic | 30.0% | |
| TCGCTTAATAAAACTTGAAC+AGG | + | chr5.3:67901455-67901474 | None:intergenic | 30.0% | |
| TCTAATAAGCCAATCCAAAT+AGG | + | chr5.3:67898611-67898630 | None:intergenic | 30.0% | |
| TGTTTGAATCACTATTTGAC+AGG | - | chr5.3:67900944-67900963 | MS.gene29719:CDS | 30.0% | |
| TTATGTACACCAACATAAGT+GGG | + | chr5.3:67901601-67901620 | None:intergenic | 30.0% | |
| TTCTGACGTATTTGATATGT+GGG | - | chr5.3:67899749-67899768 | MS.gene29719:intron | 30.0% | |
| ! | AAGGCTAAGTTAAGCTTTTT+AGG | - | chr5.3:67900712-67900731 | MS.gene29719:CDS | 30.0% |
| ! | ACCTGTTACAATAATGGAAT+TGG | + | chr5.3:67901421-67901440 | None:intergenic | 30.0% |
| ! | ACTAATTTTCCCACTTATGT+TGG | - | chr5.3:67901589-67901608 | MS.gene29719:intron | 30.0% |
| ! | ATTTGGATTTTGGACAGAAT+GGG | - | chr5.3:67899627-67899646 | MS.gene29719:intron | 30.0% |
| ! | GTATAAAAGCATAGAGAAGA+GGG | - | chr5.3:67901651-67901670 | MS.gene29719:intron | 30.0% |
| ! | TATAAAAGCATAGAGAAGAG+GGG | - | chr5.3:67901652-67901671 | MS.gene29719:intron | 30.0% |
| ! | TATTTGGATTTTGGACAGAA+TGG | - | chr5.3:67899626-67899645 | MS.gene29719:intron | 30.0% |
| ! | TGGCAAACATATTTGGATTT+TGG | - | chr5.3:67899617-67899636 | MS.gene29719:intron | 30.0% |
| ! | TGTTGTTATCATCTCAGTTT+TGG | - | chr5.3:67901729-67901748 | MS.gene29719:intron | 30.0% |
| !! | AGATGATTTTTAAGCATCTC+TGG | - | chr5.3:67901138-67901157 | MS.gene29719:intron | 30.0% |
| !! | TGTTTCTTTAGAGTAGATGA+AGG | + | chr5.3:67899491-67899510 | None:intergenic | 30.0% |
| !! | TTTTTCGAAGACAAATCCAA+AGG | - | chr5.3:67898259-67898278 | MS.gene29719:intron | 30.0% |
| !!! | ATTCAGTAACCTTGCTTTTT+TGG | - | chr5.3:67900432-67900451 | MS.gene29719:intron | 30.0% |
| !!! | TTCACTTTTTCATTGATCCT+TGG | - | chr5.3:67899341-67899360 | MS.gene29719:intron | 30.0% |
| AAAAATCAAGACGACATCTG+AGG | - | chr5.3:67901217-67901236 | MS.gene29719:intron | 35.0% | |
| AAGTACCTGTGAGATTGATT+GGG | - | chr5.3:67898647-67898666 | MS.gene29719:intron | 35.0% | |
| AAGTGTCTACCTTAAGCTTT+CGG | + | chr5.3:67901496-67901515 | None:intergenic | 35.0% | |
| AATAAAACTTGAACAGGAGC+AGG | + | chr5.3:67901449-67901468 | None:intergenic | 35.0% | |
| ACTTACACATAGAGCCTATT+TGG | - | chr5.3:67898594-67898613 | MS.gene29719:intron | 35.0% | |
| AGGCAACAAGAAAGTGAAAA+AGG | - | chr5.3:67899869-67899888 | MS.gene29719:intron | 35.0% | |
| ATCCAAACTGTCTCATTATG+TGG | - | chr5.3:67899144-67899163 | MS.gene29719:intron | 35.0% | |
| ATTGATGTTTAAGAGGTCAG+TGG | - | chr5.3:67901925-67901944 | MS.gene29719:intron | 35.0% | |
| CCACATCAAGAAAATACATC+TGG | + | chr5.3:67900458-67900477 | None:intergenic | 35.0% | |
| CCATTAACACAGGTATGATA+AGG | + | chr5.3:67901323-67901342 | None:intergenic | 35.0% | |
| CCTTATCATACCTGTGTTAA+TGG | - | chr5.3:67901320-67901339 | MS.gene29719:intron | 35.0% | |
| GAAAGTAATCACGAAGATGA+TGG | - | chr5.3:67900495-67900514 | MS.gene29719:intron | 35.0% | |
| GAAATCGAAAAGTTCAAGGA+AGG | - | chr5.3:67898120-67898139 | MS.gene29719:CDS | 35.0% | |
| GCTGAAACCTGTTACAATAA+TGG | + | chr5.3:67901427-67901446 | None:intergenic | 35.0% | |
| GGAAGAAATCGAAAAGTTCA+AGG | - | chr5.3:67898116-67898135 | MS.gene29719:CDS | 35.0% | |
| TAAACTAACCTATTCCTCCT+GGG | + | chr5.3:67901694-67901713 | None:intergenic | 35.0% | |
| TAAAGAAACACGCGAAAAAC+CGG | - | chr5.3:67899501-67899520 | MS.gene29719:intron | 35.0% | |
| TAAGTACCTGTGAGATTGAT+TGG | - | chr5.3:67898646-67898665 | MS.gene29719:intron | 35.0% | |
| TACCACATAATGAGACAGTT+TGG | + | chr5.3:67899149-67899168 | None:intergenic | 35.0% | |
| TCTGACGTATTTGATATGTG+GGG | - | chr5.3:67899750-67899769 | MS.gene29719:intron | 35.0% | |
| TGCTAAACAAGAGAGGTTAA+AGG | - | chr5.3:67901248-67901267 | MS.gene29719:intron | 35.0% | |
| TGCTTAGTGGCAAACATATT+TGG | - | chr5.3:67899610-67899629 | MS.gene29719:intron | 35.0% | |
| TTAAACTAACCTATTCCTCC+TGG | + | chr5.3:67901695-67901714 | None:intergenic | 35.0% | |
| TTATACATGAAAGCTTGAGC+AGG | + | chr5.3:67900653-67900672 | None:intergenic | 35.0% | |
| TTCGAAAAAGAGAGAATCAC+TGG | + | chr5.3:67898248-67898267 | None:intergenic | 35.0% | |
| TTTGATATGTGGGGTGATAA+AGG | - | chr5.3:67899759-67899778 | MS.gene29719:intron | 35.0% | |
| ! | ATAAAAGCATAGAGAAGAGG+GGG | - | chr5.3:67901653-67901672 | MS.gene29719:intron | 35.0% |
| ! | CCAGATGTATTTTCTTGATG+TGG | - | chr5.3:67900455-67900474 | MS.gene29719:intron | 35.0% |
| ! | GAAAGTCATCAGGTAGTTTT+TGG | - | chr5.3:67900091-67900110 | MS.gene29719:intron | 35.0% |
| ! | GGTATAAAAGCATAGAGAAG+AGG | - | chr5.3:67901650-67901669 | MS.gene29719:intron | 35.0% |
| ! | TTCATTGGCGACTAAACTTT+TGG | + | chr5.3:67899537-67899556 | None:intergenic | 35.0% |
| ! | TTTGGATTTTGGACAGAATG+GGG | - | chr5.3:67899628-67899647 | MS.gene29719:intron | 35.0% |
| !! | ACCTGATTGGTAATGTAAAC+CGG | + | chr5.3:67900605-67900624 | None:intergenic | 35.0% |
| !! | AGGATAGTACATTTTTGAGC+AGG | - | chr5.3:67902148-67902167 | MS.gene29719:intron | 35.0% |
| !! | TGCATGTTGATAGCTAATGA+AGG | - | chr5.3:67900693-67900712 | MS.gene29719:CDS | 35.0% |
| !! | TTATCTGCGTTTCTAGTATG+TGG | - | chr5.3:67899267-67899286 | MS.gene29719:CDS | 35.0% |
| !! | TTGGTTGTAGAGTACTGTAT+TGG | - | chr5.3:67899298-67899317 | MS.gene29719:intron | 35.0% |
| !!! | TATCATCTCAGTTTTGGAGA+GGG | - | chr5.3:67901735-67901754 | MS.gene29719:intron | 35.0% |
| !!! | TTAAGCATCTCTGGTTCTTT+TGG | - | chr5.3:67901147-67901166 | MS.gene29719:intron | 35.0% |
| !!! | TTATCATCTCAGTTTTGGAG+AGG | - | chr5.3:67901734-67901753 | MS.gene29719:intron | 35.0% |
| !!! | TTTATTTTATGGAGACCACG+TGG | - | chr5.3:67900745-67900764 | MS.gene29719:intron | 35.0% |
| AGCAAGGTTACTGAATTAGC+AGG | + | chr5.3:67900428-67900447 | None:intergenic | 40.0% | |
| AGGTACACGTTATTGCATAG+CGG | - | chr5.3:67899889-67899908 | MS.gene29719:intron | 40.0% | |
| ATGAATGTGGAGCGAAGTTA+GGG | + | chr5.3:67902296-67902315 | None:intergenic | 40.0% | |
| ATTCTCCCAATCAATCTCAC+AGG | + | chr5.3:67898655-67898674 | None:intergenic | 40.0% | |
| CACATAGAGCCTATTTGGAT+TGG | - | chr5.3:67898599-67898618 | MS.gene29719:intron | 40.0% | |
| CAGCATCTCAAAAATTGCTG+AGG | - | chr5.3:67901173-67901192 | MS.gene29719:intron | 40.0% | |
| CGAAGTTAGGGAAGAAAACA+AGG | + | chr5.3:67902284-67902303 | None:intergenic | 40.0% | |
| GACAAGTTGCTAAACAAGAG+AGG | - | chr5.3:67901241-67901260 | MS.gene29719:intron | 40.0% | |
| TACATCTGGCCAAAAAAGCA+AGG | + | chr5.3:67900444-67900463 | None:intergenic | 40.0% | |
| TACATTAGCTACTGCTGTTG+CGG | - | chr5.3:67900203-67900222 | MS.gene29719:CDS | 40.0% | |
| TAGGGAAGAAAACAAGGAAG+AGG | + | chr5.3:67902278-67902297 | None:intergenic | 40.0% | |
| TCAACAAAAGACGCTCTTTC+TGG | - | chr5.3:67898202-67898221 | MS.gene29719:intron | 40.0% | |
| TTTAGTAGAGAGAGAGGTGA+GGG | + | chr5.3:67901113-67901132 | None:intergenic | 40.0% | |
| TTTGATGTGGCTAGATCTTG+CGG | - | chr5.3:67899382-67899401 | MS.gene29719:CDS | 40.0% | |
| ! | AACTTTTGGACACCACTTTC+CGG | + | chr5.3:67899523-67899542 | None:intergenic | 40.0% |
| ! | GTTGCACACTTCTAAAGGAT+CGG | - | chr5.3:67901629-67901648 | MS.gene29719:intron | 40.0% |
| ! | TATGATAAGGGAAGCACAGA+AGG | + | chr5.3:67901310-67901329 | None:intergenic | 40.0% |
| ! | TGTTAATGGGTGCAGTTGTT+TGG | - | chr5.3:67901334-67901353 | MS.gene29719:intron | 40.0% |
| ! | TTGGATTTTGGACAGAATGG+GGG | - | chr5.3:67899629-67899648 | MS.gene29719:intron | 40.0% |
| ! | TTTAGAGTAGATGAAGGCAC+TGG | + | chr5.3:67899485-67899504 | None:intergenic | 40.0% |
| ! | TTTTAGTAGAGAGAGAGGTG+AGG | + | chr5.3:67901114-67901133 | None:intergenic | 40.0% |
| !! | ACATGTGCACAAGCTGTTTT+CGG | - | chr5.3:67898480-67898499 | MS.gene29719:intron | 40.0% |
| !! | CTAGTATGTGGTGGATTTGT+TGG | - | chr5.3:67899279-67899298 | MS.gene29719:intron | 40.0% |
| !!! | GTTTACCTGGTGTTTTTTCG+TGG | - | chr5.3:67901838-67901857 | MS.gene29719:intron | 40.0% |
| !!! | TGTGTTTTTGGTTTTGTGGG+AGG | + | chr5.3:67902056-67902075 | None:intergenic | 40.0% |
| AAAAAACAATACCGGCCACG+TGG | + | chr5.3:67900763-67900782 | None:intergenic | 45.0% | |
| AAATGAATTGGGCCCTGAAC+CGG | - | chr5.3:67900248-67900267 | MS.gene29719:intron | 45.0% | |
| AAGCTTGAGCAGGAAGGAAA+TGG | + | chr5.3:67900643-67900662 | None:intergenic | 45.0% | |
| ACAAAAGACGCTCTTTCTGG+TGG | - | chr5.3:67898205-67898224 | MS.gene29719:intron | 45.0% | |
| ACAACTGCACCCATTAACAC+AGG | + | chr5.3:67901333-67901352 | None:intergenic | 45.0% | |
| ACATGAAAGCTTGAGCAGGA+AGG | + | chr5.3:67900649-67900668 | None:intergenic | 45.0% | |
| ACCAACATCACTAACAGCAG+AGG | + | chr5.3:67900131-67900150 | None:intergenic | 45.0% | |
| ACCTGATGACTTTCATGCGT+GGG | + | chr5.3:67900085-67900104 | None:intergenic | 45.0% | |
| ATGTGCCACGAAAAAACACC+AGG | + | chr5.3:67901846-67901865 | None:intergenic | 45.0% | |
| CAAGGAAGGGTAAGAAAGCA+TGG | - | chr5.3:67898134-67898153 | MS.gene29719:CDS | 45.0% | |
| CACATATCGAGCCATGAATG+TGG | + | chr5.3:67902309-67902328 | None:intergenic | 45.0% | |
| CACATTCATGGCTCGATATG+TGG | - | chr5.3:67902307-67902326 | MS.gene29719:CDS | 45.0% | |
| CAGCAGTAGCTAATGTATCC+TGG | + | chr5.3:67900200-67900219 | None:intergenic | 45.0% | |
| CATGAATGTGGAGCGAAGTT+AGG | + | chr5.3:67902297-67902316 | None:intergenic | 45.0% | |
| CGTCTTCTGCTTAGTTTACC+TGG | - | chr5.3:67901825-67901844 | MS.gene29719:intron | 45.0% | |
| CTAACTTCGCTCCACATTCA+TGG | - | chr5.3:67902295-67902314 | MS.gene29719:CDS | 45.0% | |
| GGATTAAATGAGCATCCTGG+AGG | + | chr5.3:67900064-67900083 | None:intergenic | 45.0% | |
| GGGTTGTTGCACACTTCTAA+AGG | - | chr5.3:67901624-67901643 | MS.gene29719:intron | 45.0% | |
| GTCTACCTTAAGCTTTCGGA+TGG | + | chr5.3:67901492-67901511 | None:intergenic | 45.0% | |
| GTGGGATTAAATGAGCATCC+TGG | + | chr5.3:67900067-67900086 | None:intergenic | 45.0% | |
| TACCTGATGACTTTCATGCG+TGG | + | chr5.3:67900086-67900105 | None:intergenic | 45.0% | |
| TACTCATATTCCAGCTGTCG+AGG | - | chr5.3:67900033-67900052 | MS.gene29719:intron | 45.0% | |
| TACTTGTGCTTTCCTAAGCG+AGG | + | chr5.3:67901282-67901301 | None:intergenic | 45.0% | |
| TATGTGGCAAGAAGACGTGA+TGG | - | chr5.3:67902323-67902342 | MS.gene29719:CDS | 45.0% | |
| TCAGAAATAGCTTCTCCAGC+AGG | + | chr5.3:67900288-67900307 | None:intergenic | 45.0% | |
| TCCTCTGCTGTTAGTGATGT+TGG | - | chr5.3:67900127-67900146 | MS.gene29719:intron | 45.0% | |
| TCGACAGCTGGAATATGAGT+AGG | + | chr5.3:67900034-67900053 | None:intergenic | 45.0% | |
| TCTCCAGCAGGAACAGTTAA+AGG | + | chr5.3:67900276-67900295 | None:intergenic | 45.0% | |
| TGGATCCATCCGAAAGCTTA+AGG | - | chr5.3:67901484-67901503 | MS.gene29719:intron | 45.0% | |
| TTCCAAAACCCAGGAGGAAT+AGG | - | chr5.3:67901683-67901702 | MS.gene29719:intron | 45.0% | |
| ! | AACCTATTCCTCCTGGGTTT+TGG | + | chr5.3:67901688-67901707 | None:intergenic | 45.0% |
| ! | GCCGGTTTACATTACCAATC+AGG | - | chr5.3:67900601-67900620 | MS.gene29719:intron | 45.0% |
| !! | AAGGCACTGGCTTAACAAAC+TGG | + | chr5.3:67899472-67899491 | None:intergenic | 45.0% |
| !! | TCTGCGTTTCTAGTATGTGG+TGG | - | chr5.3:67899270-67899289 | MS.gene29719:CDS | 45.0% |
| !!! | TCTCAGTTTTGGAGAGGGTT+TGG | - | chr5.3:67901740-67901759 | MS.gene29719:intron | 45.0% |
| !! | CAAAATAAATAAATAAAAAT+GGG | + | chr5.3:67898291-67898310 | None:intergenic | 5.0% |
| AAGCATAGAGAAGAGGGGGT+TGG | - | chr5.3:67901657-67901676 | MS.gene29719:intron | 50.0% | |
| ACACGCGAAAAACCGGAAAG+TGG | - | chr5.3:67899508-67899527 | MS.gene29719:intron | 50.0% | |
| GTGCCTTTAACTGTTCCTGC+TGG | - | chr5.3:67900270-67900289 | MS.gene29719:intron | 50.0% | |
| TCCCACGCATGAAAGTCATC+AGG | - | chr5.3:67900081-67900100 | MS.gene29719:intron | 50.0% | |
| TGGTTGTTCCAAAACCCAGG+AGG | - | chr5.3:67901677-67901696 | MS.gene29719:intron | 50.0% | |
| TGTCATGCAGACGCAGATGA+AGG | - | chr5.3:67899849-67899868 | MS.gene29719:intron | 50.0% | |
| TTGTGCTTTCCTAAGCGAGG+AGG | + | chr5.3:67901279-67901298 | None:intergenic | 50.0% | |
| ! | GCAGGAACAGTTAAAGGCAC+CGG | + | chr5.3:67900270-67900289 | None:intergenic | 50.0% |
| ! | GGTTGGTTGTTCCAAAACCC+AGG | - | chr5.3:67901674-67901693 | MS.gene29719:intron | 50.0% |
| ! | TTTTATGGAGACCACGTGGC+CGG | - | chr5.3:67900749-67900768 | MS.gene29719:intron | 50.0% |
| !! | ACAGTTAAAGGCACCGGTTC+AGG | + | chr5.3:67900264-67900283 | None:intergenic | 50.0% |
| !! | CAGTTAAAGGCACCGGTTCA+GGG | + | chr5.3:67900263-67900282 | None:intergenic | 50.0% |
| AAGGCATGTCCTCCTCGCTT+AGG | - | chr5.3:67901267-67901286 | MS.gene29719:intron | 55.0% | |
| AGTAGAGAGAGAGGTGAGGG+AGG | + | chr5.3:67901110-67901129 | None:intergenic | 55.0% | |
| GGAGGATCAACCTCGACAGC+TGG | + | chr5.3:67900046-67900065 | None:intergenic | 60.0% | |
| ! | GCTGTCGAGGTTGATCCTCC+AGG | - | chr5.3:67900046-67900065 | MS.gene29719:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 67898112 | 67902353 | 67898112 | ID=MS.gene29719 |
| chr5.3 | mRNA | 67898112 | 67902353 | 67898112 | ID=MS.gene29719.t1;Parent=MS.gene29719 |
| chr5.3 | exon | 67902185 | 67902353 | 67902185 | ID=MS.gene29719.t1.exon1;Parent=MS.gene29719.t1 |
| chr5.3 | CDS | 67902185 | 67902353 | 67902185 | ID=cds.MS.gene29719.t1;Parent=MS.gene29719.t1 |
| chr5.3 | exon | 67900897 | 67901069 | 67900897 | ID=MS.gene29719.t1.exon2;Parent=MS.gene29719.t1 |
| chr5.3 | CDS | 67900897 | 67901069 | 67900897 | ID=cds.MS.gene29719.t1;Parent=MS.gene29719.t1 |
| chr5.3 | exon | 67900685 | 67900733 | 67900685 | ID=MS.gene29719.t1.exon3;Parent=MS.gene29719.t1 |
| chr5.3 | CDS | 67900685 | 67900733 | 67900685 | ID=cds.MS.gene29719.t1;Parent=MS.gene29719.t1 |
| chr5.3 | exon | 67900575 | 67900606 | 67900575 | ID=MS.gene29719.t1.exon4;Parent=MS.gene29719.t1 |
| chr5.3 | CDS | 67900575 | 67900606 | 67900575 | ID=cds.MS.gene29719.t1;Parent=MS.gene29719.t1 |
| chr5.3 | exon | 67900363 | 67900443 | 67900363 | ID=MS.gene29719.t1.exon5;Parent=MS.gene29719.t1 |
| chr5.3 | CDS | 67900363 | 67900443 | 67900363 | ID=cds.MS.gene29719.t1;Parent=MS.gene29719.t1 |
| chr5.3 | exon | 67900151 | 67900264 | 67900151 | ID=MS.gene29719.t1.exon6;Parent=MS.gene29719.t1 |
| chr5.3 | CDS | 67900151 | 67900264 | 67900151 | ID=cds.MS.gene29719.t1;Parent=MS.gene29719.t1 |
| chr5.3 | exon | 67899918 | 67900006 | 67899918 | ID=MS.gene29719.t1.exon7;Parent=MS.gene29719.t1 |
| chr5.3 | CDS | 67899918 | 67900006 | 67899918 | ID=cds.MS.gene29719.t1;Parent=MS.gene29719.t1 |
| chr5.3 | exon | 67899380 | 67899499 | 67899380 | ID=MS.gene29719.t1.exon8;Parent=MS.gene29719.t1 |
| chr5.3 | CDS | 67899380 | 67899499 | 67899380 | ID=cds.MS.gene29719.t1;Parent=MS.gene29719.t1 |
| chr5.3 | exon | 67899167 | 67899289 | 67899167 | ID=MS.gene29719.t1.exon9;Parent=MS.gene29719.t1 |
| chr5.3 | CDS | 67899167 | 67899289 | 67899167 | ID=cds.MS.gene29719.t1;Parent=MS.gene29719.t1 |
| chr5.3 | exon | 67898960 | 67899026 | 67898960 | ID=MS.gene29719.t1.exon10;Parent=MS.gene29719.t1 |
| chr5.3 | CDS | 67898960 | 67899026 | 67898960 | ID=cds.MS.gene29719.t1;Parent=MS.gene29719.t1 |
| chr5.3 | exon | 67898761 | 67898840 | 67898761 | ID=MS.gene29719.t1.exon11;Parent=MS.gene29719.t1 |
| chr5.3 | CDS | 67898761 | 67898840 | 67898761 | ID=cds.MS.gene29719.t1;Parent=MS.gene29719.t1 |
| chr5.3 | exon | 67898112 | 67898193 | 67898112 | ID=MS.gene29719.t1.exon12;Parent=MS.gene29719.t1 |
| chr5.3 | CDS | 67898112 | 67898193 | 67898112 | ID=cds.MS.gene29719.t1;Parent=MS.gene29719.t1 |
| Gene Sequence |
| Protein sequence |
