Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene066996.t1 | XP_013466257.1 | 88.8 | 482 | 45 | 1 | 1 | 473 | 1 | 482 | 4.00E-181 | 644.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene066996.t1 | Q93ZV7 | 53.5 | 475 | 163 | 7 | 6 | 472 | 6 | 430 | 6.2e-98 | 359.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene066996.t1 | A0A072VFS9 | 88.8 | 482 | 45 | 1 | 1 | 473 | 1 | 482 | 2.9e-181 | 644.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049207 | MS.gene066996 | 0.816002 | 6.92E-52 | -1.69E-46 |
MS.gene049473 | MS.gene066996 | 0.811211 | 7.84E-51 | -1.69E-46 |
MS.gene049824 | MS.gene066996 | 0.824785 | 6.69E-54 | -1.69E-46 |
MS.gene049825 | MS.gene066996 | 0.855703 | 5.28E-62 | -1.69E-46 |
MS.gene049873 | MS.gene066996 | 0.854265 | 1.38E-61 | -1.69E-46 |
MS.gene050427 | MS.gene066996 | 0.801547 | 8.55E-49 | -1.69E-46 |
MS.gene05134 | MS.gene066996 | 0.833834 | 4.25E-56 | -1.69E-46 |
MS.gene05188 | MS.gene066996 | 0.814932 | 1.20E-51 | -1.69E-46 |
MS.gene052717 | MS.gene066996 | 0.809966 | 1.46E-50 | -1.69E-46 |
MS.gene052947 | MS.gene066996 | 0.828005 | 1.14E-54 | -1.69E-46 |
MS.gene053122 | MS.gene066996 | 0.854534 | 1.15E-61 | -1.69E-46 |
MS.gene053226 | MS.gene066996 | 0.830192 | 3.37E-55 | -1.69E-46 |
MS.gene053294 | MS.gene066996 | 0.802449 | 5.58E-49 | -1.69E-46 |
MS.gene053492 | MS.gene066996 | 0.824181 | 9.28E-54 | -1.69E-46 |
MS.gene055555 | MS.gene066996 | 0.850538 | 1.59E-60 | -1.69E-46 |
MS.gene055808 | MS.gene066996 | 0.843929 | 1.04E-58 | -1.69E-46 |
MS.gene056091 | MS.gene066996 | 0.844363 | 7.92E-59 | -1.69E-46 |
MS.gene056403 | MS.gene066996 | 0.802919 | 4.46E-49 | -1.69E-46 |
MS.gene056631 | MS.gene066996 | 0.804326 | 2.28E-49 | -1.69E-46 |
MS.gene05689 | MS.gene066996 | 0.836358 | 9.81E-57 | -1.69E-46 |
MS.gene057102 | MS.gene066996 | 0.818681 | 1.73E-52 | -1.69E-46 |
MS.gene057705 | MS.gene066996 | 0.840169 | 1.02E-57 | -1.69E-46 |
MS.gene058783 | MS.gene066996 | 0.808634 | 2.81E-50 | -1.69E-46 |
MS.gene05954 | MS.gene066996 | 0.810562 | 1.08E-50 | -1.69E-46 |
MS.gene05985 | MS.gene066996 | -0.813752 | 2.18E-51 | -1.69E-46 |
MS.gene059901 | MS.gene066996 | -0.836507 | 8.98E-57 | -1.69E-46 |
MS.gene059935 | MS.gene066996 | 0.878335 | 3.05E-69 | -1.69E-46 |
MS.gene06001 | MS.gene066996 | 0.804433 | 2.17E-49 | -1.69E-46 |
MS.gene060429 | MS.gene066996 | 0.857113 | 2.04E-62 | -1.69E-46 |
MS.gene060763 | MS.gene066996 | 0.847323 | 1.24E-59 | -1.69E-46 |
MS.gene060830 | MS.gene066996 | 0.856247 | 3.66E-62 | -1.69E-46 |
MS.gene060917 | MS.gene066996 | 0.831877 | 1.30E-55 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene066996 | MS.gene064459 | PPI |
MS.gene002676 | MS.gene066996 | PPI |
MS.gene066996 | MS.gene27028 | PPI |
MS.gene066996 | MS.gene35157 | PPI |
MS.gene066996 | MS.gene43614 | PPI |
MS.gene066996 | MS.gene36492 | PPI |
MS.gene066996 | MS.gene023154 | PPI |
MS.gene05791 | MS.gene066996 | PPI |
MS.gene066996 | MS.gene63973 | PPI |
MS.gene29720 | MS.gene066996 | PPI |
MS.gene08205 | MS.gene066996 | PPI |
MS.gene051451 | MS.gene066996 | PPI |
MS.gene066996 | MS.gene002675 | PPI |
MS.gene65076 | MS.gene066996 | PPI |
MS.gene066996 | MS.gene51112 | PPI |
MS.gene028300 | MS.gene066996 | PPI |
MS.gene94182 | MS.gene066996 | PPI |
MS.gene066996 | MS.gene067809 | PPI |
MS.gene51868 | MS.gene066996 | PPI |
MS.gene43604 | MS.gene066996 | PPI |
MS.gene24199 | MS.gene066996 | PPI |
MS.gene66089 | MS.gene066996 | PPI |
MS.gene05792 | MS.gene066996 | PPI |
MS.gene98888 | MS.gene066996 | PPI |
MS.gene004357 | MS.gene066996 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene066996.t1 | MTR_1g026890 | 97.303 | 482 | 4 | 1 | 1 | 473 | 1 | 482 | 0.0 | 940 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene066996.t1 | AT4G32720 | 50.985 | 457 | 158 | 9 | 1 | 445 | 1 | 403 | 2.34e-143 | 417 |
MS.gene066996.t1 | AT4G32720 | 51.584 | 442 | 153 | 8 | 1 | 430 | 1 | 393 | 1.90e-141 | 413 |
MS.gene066996.t1 | AT1G79880 | 42.217 | 424 | 181 | 11 | 5 | 427 | 4 | 364 | 3.59e-96 | 296 |
MS.gene066996.t1 | AT1G79880 | 39.142 | 373 | 163 | 11 | 56 | 427 | 1 | 310 | 1.43e-69 | 225 |
MS.gene066996.t1 | AT1G79880 | 38.701 | 385 | 167 | 12 | 56 | 434 | 1 | 322 | 2.37e-69 | 225 |
MS.gene066996.t1 | AT2G43970 | 29.452 | 146 | 88 | 2 | 2 | 147 | 185 | 315 | 3.86e-12 | 68.9 |
MS.gene066996.t1 | AT5G46250 | 27.074 | 229 | 123 | 9 | 8 | 209 | 101 | 312 | 3.88e-12 | 68.6 |
MS.gene066996.t1 | AT2G43970 | 29.452 | 146 | 88 | 2 | 2 | 147 | 185 | 315 | 4.64e-12 | 68.6 |
MS.gene066996.t1 | AT5G46250 | 29.940 | 167 | 92 | 5 | 8 | 166 | 101 | 250 | 7.66e-12 | 67.0 |
MS.gene066996.t1 | AT5G46250 | 29.940 | 167 | 92 | 5 | 8 | 166 | 101 | 250 | 8.47e-12 | 67.0 |
Find 89 sgRNAs with CRISPR-Local
Find 355 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AATACTTTCTATATTTATTT+TGG | 0.150399 | 1.3:+12808725 | None:intergenic |
CGTGCTTTCTGAGCAGCTTC+AGG | 0.270223 | 1.3:+12809324 | None:intergenic |
AAGGCTATAACTAAGCCTTT+AGG | 0.286449 | 1.3:+12810097 | None:intergenic |
GCCGAAAAGGGCCAGGAAAC+TGG | 0.288268 | 1.3:-12809794 | MS.gene066996:CDS |
ACCTGCTCAATTACCTCTTC+TGG | 0.299485 | 1.3:+12811279 | None:intergenic |
AACCTGTCGTATAACCTTCT+TGG | 0.309750 | 1.3:+12813966 | None:intergenic |
CTCAATTACCTCTTCTGGCT+TGG | 0.321742 | 1.3:+12811284 | None:intergenic |
AGGCTATAACTAAGCCTTTA+GGG | 0.335538 | 1.3:+12810098 | None:intergenic |
AAGGTTGTGTTTCAGAAGTT+TGG | 0.339229 | 1.3:-12809713 | MS.gene066996:CDS |
ACGTGCTGCTGCAGCCCTTT+CGG | 0.339660 | 1.3:-12809304 | MS.gene066996:CDS |
TGCTGCAGCCCTTTCGGAAA+AGG | 0.341335 | 1.3:-12809298 | MS.gene066996:CDS |
CGTAATAGAGACAATGATTC+TGG | 0.344136 | 1.3:-12808757 | MS.gene066996:CDS |
AAGTAAAACTAACCGGTAAC+TGG | 0.344730 | 1.3:+12809237 | None:intergenic |
CTTTGCTTTGTTCCTTCAAT+CGG | 0.350383 | 1.3:-12812270 | MS.gene066996:CDS |
ACAGTACATAGATTTCAATA+TGG | 0.354619 | 1.3:-12809379 | MS.gene066996:intron |
TAACTACACAGTGGTTAGTT+TGG | 0.362858 | 1.3:-12812293 | MS.gene066996:intron |
GCTGCAGCCCTTTCGGAAAA+GGG | 0.363306 | 1.3:-12809297 | MS.gene066996:CDS |
TGAACTGCTCTTTAGTTTGA+AGG | 0.365442 | 1.3:+12810078 | None:intergenic |
AGAAGAGCCAAGAAAACAAC+CGG | 0.372511 | 1.3:-12809844 | MS.gene066996:CDS |
TCAATTACCTCTTCTGGCTT+GGG | 0.381807 | 1.3:+12811285 | None:intergenic |
TGCGTGCCACTTACCTTCCT+CGG | 0.406995 | 1.3:+12808913 | None:intergenic |
TACTAAGCCCGCTGATGTTA+AGG | 0.409561 | 1.3:-12812218 | MS.gene066996:CDS |
TTCAATATGGGAGATGAGTC+AGG | 0.414927 | 1.3:-12809366 | MS.gene066996:CDS |
GGAGGCTGAAGGCGAAGAAA+AGG | 0.425040 | 1.3:-12809915 | MS.gene066996:CDS |
CGGGCGCTGAGCTAGAATTA+AGG | 0.430112 | 1.3:-12810687 | MS.gene066996:CDS |
ATGCTTTCGCATCCGATTGA+AGG | 0.433367 | 1.3:+12812258 | None:intergenic |
GAAGAAGTGGAGTCCTTCTT+CGG | 0.441428 | 1.3:-12811207 | MS.gene066996:CDS |
GATTTCAGGTCAACAGTGTT+CGG | 0.445081 | 1.3:-12810816 | MS.gene066996:intron |
GCTACTCTAGATCCAGTTAC+CGG | 0.447734 | 1.3:-12809249 | MS.gene066996:intron |
CTTGGCATATTGACCGAAGA+AGG | 0.449259 | 1.3:+12811194 | None:intergenic |
AAATGGGGTGAAGGAAGAAA+AGG | 0.452338 | 1.3:-12809882 | MS.gene066996:CDS |
GGAGGAGGAAGGTATGGTAG+AGG | 0.458576 | 1.3:-12808793 | MS.gene066996:CDS |
TTTACTCAAGAAATCATCCC+TGG | 0.462095 | 1.3:+12813825 | None:intergenic |
TGCATTCCAGGGAGCAAAGT+TGG | 0.464023 | 1.3:-12811324 | MS.gene066996:intron |
TACTGTGAAGCTTGAAGAAG+TGG | 0.465343 | 1.3:-12811220 | MS.gene066996:CDS |
TCACCTTTCCTTCACCTGCC+CGG | 0.468675 | 1.3:+12809825 | None:intergenic |
GGTGACTGAAGGTGCCGAAA+AGG | 0.481831 | 1.3:-12809807 | MS.gene066996:CDS |
TATCTTGTTTACCACGAAGC+TGG | 0.484324 | 1.3:+12808958 | None:intergenic |
AGCTTCACAGTATATTCAAA+TGG | 0.487645 | 1.3:+12811231 | None:intergenic |
CAGTACATAGATTTCAATAT+GGG | 0.489907 | 1.3:-12809378 | MS.gene066996:CDS |
TGTGTTATCCTCCTCGTGGT+TGG | 0.492162 | 1.3:+12810220 | None:intergenic |
TTCAGGGGAGGAGGAAGGTA+TGG | 0.496516 | 1.3:-12808799 | MS.gene066996:intron |
CTGCAGCCCTTTCGGAAAAG+GGG | 0.498607 | 1.3:-12809296 | MS.gene066996:CDS |
TTCCAGGGAGCAAAGTTGGC+AGG | 0.499364 | 1.3:-12811320 | MS.gene066996:intron |
TGTCTTACGTGAAGATTTGA+AGG | 0.499878 | 1.3:-12809732 | MS.gene066996:CDS |
GAAAACAACCGGGCAGGTGA+AGG | 0.504891 | 1.3:-12809833 | MS.gene066996:CDS |
GCCAGAAGAGGTAATTGAGC+AGG | 0.508078 | 1.3:-12811280 | MS.gene066996:CDS |
TGAAGGTGCCGAAAAGGGCC+AGG | 0.512350 | 1.3:-12809801 | MS.gene066996:CDS |
CCGAAAAGGGCCAGGAAACT+GGG | 0.514402 | 1.3:-12809793 | MS.gene066996:CDS |
ACTGTCAATGAAAGTGAAGA+TGG | 0.515278 | 1.3:-12813802 | MS.gene066996:CDS |
TATTGTTACAGCTACCCTAA+AGG | 0.518011 | 1.3:-12810112 | MS.gene066996:intron |
GTTTCTTCCTTAACATCAGC+GGG | 0.518351 | 1.3:+12812211 | None:intergenic |
CTTTGACGCAGAAAGAGAAA+AGG | 0.519218 | 1.3:-12810282 | MS.gene066996:CDS |
GTGACTGAAGGTGCCGAAAA+GGG | 0.521308 | 1.3:-12809806 | MS.gene066996:CDS |
GTTCGGTTGCCCCGTCATGT+TGG | 0.521804 | 1.3:-12810799 | MS.gene066996:CDS |
TGCAGCCCTTTCGGAAAAGG+GGG | 0.524299 | 1.3:-12809295 | MS.gene066996:CDS |
TCCTCAGCAGCAACTTCAGA+GGG | 0.526503 | 1.3:+12810004 | None:intergenic |
CAATACTGGAGCCAGCTTCG+TGG | 0.527832 | 1.3:-12808969 | MS.gene066996:CDS |
TCAGTGATAGTAATCTTCCC+AGG | 0.528131 | 1.3:-12813843 | MS.gene066996:CDS |
ACCCTCTGAAGTTGCTGCTG+AGG | 0.528326 | 1.3:-12810005 | MS.gene066996:CDS |
GGAGGAAGGTATGGTAGAGG+AGG | 0.530321 | 1.3:-12808790 | MS.gene066996:CDS |
AGCCAAGAAAACAACCGGGC+AGG | 0.531861 | 1.3:-12809839 | MS.gene066996:CDS |
GAGATGAGTCAGGATTCATT+CGG | 0.541514 | 1.3:-12809356 | MS.gene066996:CDS |
AACCAAGAAGGTTATACGAC+AGG | 0.543197 | 1.3:-12813968 | MS.gene066996:intron |
TCACTCAAGCTATCAGAAGA+TGG | 0.556963 | 1.3:-12812151 | MS.gene066996:intron |
GATGCGAAAGCATCTTAAGT+TGG | 0.561750 | 1.3:-12812248 | MS.gene066996:CDS |
CAACCGGGCAGGTGAAGGAA+AGG | 0.585700 | 1.3:-12809828 | MS.gene066996:CDS |
TTCCTCAGCAGCAACTTCAG+AGG | 0.588125 | 1.3:+12810003 | None:intergenic |
CATCTGATGAGAACTCAACA+AGG | 0.591422 | 1.3:+12810749 | None:intergenic |
CAATGGAGTGAACGAAGGAA+AGG | 0.592633 | 1.3:-12809936 | MS.gene066996:CDS |
TCAGAAGTTTGGTGATGTGA+AGG | 0.592670 | 1.3:-12809702 | MS.gene066996:intron |
CAGTGATAGTAATCTTCCCA+GGG | 0.596203 | 1.3:-12813842 | MS.gene066996:CDS |
GCAGCCCTTTCGGAAAAGGG+GGG | 0.596520 | 1.3:-12809294 | MS.gene066996:CDS |
TTACTCAAGAAATCATCCCT+GGG | 0.601574 | 1.3:+12813826 | None:intergenic |
TGACGAAGAAACAACCAAGA+AGG | 0.607861 | 1.3:-12813980 | MS.gene066996:CDS |
TGAACTTCCCAAGCCAGAAG+AGG | 0.608914 | 1.3:-12811292 | MS.gene066996:CDS |
AGAGACAATGATTCTGGACG+AGG | 0.611973 | 1.3:-12808751 | MS.gene066996:CDS |
GACAATGATAAAGAAAACAA+TGG | 0.616572 | 1.3:-12809953 | MS.gene066996:CDS |
GGTGAAGGAAAGGTGACTGA+AGG | 0.628219 | 1.3:-12809818 | MS.gene066996:CDS |
AGTTTCTTCCTTAACATCAG+CGG | 0.630747 | 1.3:+12812210 | None:intergenic |
CTTCTTCGGTCAATATGCCA+AGG | 0.638433 | 1.3:-12811193 | MS.gene066996:intron |
AACGAAGGAAAGGAGGCTGA+AGG | 0.639810 | 1.3:-12809926 | MS.gene066996:CDS |
TGGAGTGAACGAAGGAAAGG+AGG | 0.640717 | 1.3:-12809933 | MS.gene066996:CDS |
GAAGAGCCAAGAAAACAACC+GGG | 0.640992 | 1.3:-12809843 | MS.gene066996:CDS |
TATTTGTGTTATCCTCCTCG+TGG | 0.654110 | 1.3:+12810216 | None:intergenic |
GAAAACAATGGAGTGAACGA+AGG | 0.669742 | 1.3:-12809941 | MS.gene066996:CDS |
ATCTGATGAGAACTCAACAA+GGG | 0.670020 | 1.3:+12810750 | None:intergenic |
GAATGTGGGTTCCAACCACG+AGG | 0.704964 | 1.3:-12810231 | MS.gene066996:CDS |
TGTGGGTTCCAACCACGAGG+AGG | 0.705081 | 1.3:-12810228 | MS.gene066996:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTTATTTAACAAAAATAGTT+TGG | - | chr1.3:12811812-12811831 | MS.gene066996:intron | 10.0% |
!!! | AAATTGAAGTTTTTTATAAA+GGG | + | chr1.3:12812319-12812338 | None:intergenic | 10.0% |
!!! | AATACTTTCTATATTTATTT+TGG | + | chr1.3:12813998-12814017 | None:intergenic | 10.0% |
!! | TAATATATGTATTTGTCAAA+TGG | + | chr1.3:12812207-12812226 | None:intergenic | 15.0% |
!! | TATTAAAAAACTGTAATTGA+TGG | - | chr1.3:12812254-12812273 | MS.gene066996:CDS | 15.0% |
!! | TGTATATTCATTAAATTTCT+TGG | - | chr1.3:12811683-12811702 | MS.gene066996:intron | 15.0% |
!!! | AATTATATTAATACCTTTTC+AGG | - | chr1.3:12813904-12813923 | MS.gene066996:intron | 15.0% |
!!! | ATTATATTAATACCTTTTCA+GGG | - | chr1.3:12813905-12813924 | MS.gene066996:intron | 15.0% |
!!! | GAAATTGAAGTTTTTTATAA+AGG | + | chr1.3:12812320-12812339 | None:intergenic | 15.0% |
!!! | GTTTATATTTTTAATGATGA+AGG | - | chr1.3:12810927-12810946 | MS.gene066996:intron | 15.0% |
!!! | TCGTCTTTTATTTATTTATT+TGG | - | chr1.3:12813137-12813156 | MS.gene066996:intron | 15.0% |
!!! | TTAATGAATCATTAATTTTC+TGG | - | chr1.3:12811179-12811198 | MS.gene066996:intron | 15.0% |
!! | AAAAATAGAGAAAATCATCA+AGG | + | chr1.3:12813845-12813864 | None:intergenic | 20.0% |
!! | AACAGCATAATCTAAATTAA+TGG | + | chr1.3:12811006-12811025 | None:intergenic | 20.0% |
!! | AATGAAATTTATATCTATCG+TGG | + | chr1.3:12811160-12811179 | None:intergenic | 20.0% |
!! | ACCAAATTGATAAACAAAAT+AGG | + | chr1.3:12808966-12808985 | None:intergenic | 20.0% |
!! | ATAGATAAATATCAAACCAA+AGG | + | chr1.3:12813086-12813105 | None:intergenic | 20.0% |
!! | ATTTAAGAAAATTGAAGTAC+CGG | - | chr1.3:12809084-12809103 | MS.gene066996:intron | 20.0% |
!! | CCAAATTGATAAACAAAATA+GGG | + | chr1.3:12808965-12808984 | None:intergenic | 20.0% |
!! | GAAATAAGTAATAAGTTATG+TGG | + | chr1.3:12811362-12811381 | None:intergenic | 20.0% |
!! | GTTAATACCAATAAAAAGTA+GGG | - | chr1.3:12809756-12809775 | MS.gene066996:CDS | 20.0% |
!! | TACAACAATTATACACAAAA+TGG | + | chr1.3:12810625-12810644 | None:intergenic | 20.0% |
!! | TAGATATAAATTTCATGTAG+TGG | + | chr1.3:12811121-12811140 | None:intergenic | 20.0% |
!!! | ACATTTTTGTTTTTGATTTC+AGG | - | chr1.3:12811890-12811909 | MS.gene066996:intron | 20.0% |
!!! | AGATTTCTTTAAGATAAATC+TGG | - | chr1.3:12811745-12811764 | MS.gene066996:intron | 20.0% |
!!! | ATATTTTCTCAAATTACTGT+CGG | - | chr1.3:12810117-12810136 | MS.gene066996:intron | 20.0% |
!!! | ATCTAATTTTTCAATCAGTT+GGG | - | chr1.3:12813510-12813529 | MS.gene066996:intron | 20.0% |
!!! | ATTAATTTAGAGTTAATCGA+AGG | + | chr1.3:12811095-12811114 | None:intergenic | 20.0% |
!!! | ATTACTTTGCTTTCATTTTA+TGG | + | chr1.3:12812576-12812595 | None:intergenic | 20.0% |
!!! | CTTCAATTTTCTTAAATGAT+CGG | + | chr1.3:12809081-12809100 | None:intergenic | 20.0% |
!!! | GAAGAAAATAAACTGATTTT+AGG | + | chr1.3:12809693-12809712 | None:intergenic | 20.0% |
!!! | GATGATTTTCTCTATTTTTT+GGG | - | chr1.3:12813846-12813865 | MS.gene066996:CDS | 20.0% |
!!! | TGATGATTTTCTCTATTTTT+TGG | - | chr1.3:12813845-12813864 | MS.gene066996:CDS | 20.0% |
!!! | TTATATTAATACCTTTTCAG+GGG | - | chr1.3:12813906-12813925 | MS.gene066996:intron | 20.0% |
!!! | TTTGTTTATCAATTTGGTTT+AGG | - | chr1.3:12808968-12808987 | MS.gene066996:CDS | 20.0% |
! | AAACCTTCAAATATTAACCA+CGG | + | chr1.3:12811781-12811800 | None:intergenic | 25.0% |
! | AACTCTAAATTAACGATAGA+TGG | - | chr1.3:12810980-12810999 | MS.gene066996:intron | 25.0% |
! | ACAGTACATAGATTTCAATA+TGG | - | chr1.3:12813341-12813360 | MS.gene066996:intron | 25.0% |
! | ATAAACAAAATAGGGCAAAA+TGG | + | chr1.3:12808957-12808976 | None:intergenic | 25.0% |
! | ATATATTAACATTAATGCCG+TGG | - | chr1.3:12811587-12811606 | MS.gene066996:intron | 25.0% |
! | ATTTAGATTATGCTGTTGTA+TGG | - | chr1.3:12811009-12811028 | MS.gene066996:intron | 25.0% |
! | ATTTATGTTGTTCTGTTGTA+TGG | - | chr1.3:12811041-12811060 | MS.gene066996:intron | 25.0% |
! | CAATCTATCCTATTCTTAAT+TGG | + | chr1.3:12810786-12810805 | None:intergenic | 25.0% |
! | CAGGTTATTAAAACAAAAGA+AGG | + | chr1.3:12813193-12813212 | None:intergenic | 25.0% |
! | CAGTACATAGATTTCAATAT+GGG | - | chr1.3:12813342-12813361 | MS.gene066996:intron | 25.0% |
! | CATTCTAACAGTATTATAGT+CGG | - | chr1.3:12811614-12811633 | MS.gene066996:intron | 25.0% |
! | CATTGATGTTAATATTACCT+TGG | + | chr1.3:12811547-12811566 | None:intergenic | 25.0% |
! | CGTTAATACCAATAAAAAGT+AGG | - | chr1.3:12809755-12809774 | MS.gene066996:CDS | 25.0% |
! | GAATAATTAAGCAAAAACGA+CGG | + | chr1.3:12808785-12808804 | None:intergenic | 25.0% |
! | GACAATGATAAAGAAAACAA+TGG | - | chr1.3:12812767-12812786 | MS.gene066996:intron | 25.0% |
! | GAGACTTATTAATTAAATGG+TGG | + | chr1.3:12809561-12809580 | None:intergenic | 25.0% |
! | GATGTAAAAGTAAAACTAAC+CGG | + | chr1.3:12813493-12813512 | None:intergenic | 25.0% |
! | GTGATAAATTCATTCTAATC+AGG | - | chr1.3:12810654-12810673 | MS.gene066996:intron | 25.0% |
! | TGTATATATTTACTCAATGC+AGG | - | chr1.3:12812410-12812429 | MS.gene066996:intron | 25.0% |
! | TTATACACAAAATGGATGAA+TGG | + | chr1.3:12810617-12810636 | None:intergenic | 25.0% |
! | TTGATCAAATGAGAAGAAAT+TGG | + | chr1.3:12810362-12810381 | None:intergenic | 25.0% |
!! | ATACATAAAGCATCATTACT+CGG | + | chr1.3:12811668-12811687 | None:intergenic | 25.0% |
!! | ATTTTCCCTAGTTTACATTT+TGG | + | chr1.3:12810332-12810351 | None:intergenic | 25.0% |
!! | TTGCTTTCATTTTATGGTTA+GGG | + | chr1.3:12812570-12812589 | None:intergenic | 25.0% |
!! | TTTGCTTTCATTTTATGGTT+AGG | + | chr1.3:12812571-12812590 | None:intergenic | 25.0% |
!!! | ATTTGTTGTTGTTTTTGGAA+TGG | - | chr1.3:12809421-12809440 | MS.gene066996:intron | 25.0% |
!!! | CAATTTGGTTTAGGTTTTTA+GGG | - | chr1.3:12808977-12808996 | MS.gene066996:CDS | 25.0% |
!!! | CATCTAATTTTTCAATCAGT+TGG | - | chr1.3:12813509-12813528 | MS.gene066996:intron | 25.0% |
!!! | CCATTCAATTCAATTTTAGT+GGG | - | chr1.3:12809481-12809500 | MS.gene066996:intron | 25.0% |
!!! | CCCTATTTTGTTTATCAATT+TGG | - | chr1.3:12808962-12808981 | MS.gene066996:CDS | 25.0% |
!!! | CTAGTGACAATGATTTTTTA+TGG | - | chr1.3:12813571-12813590 | MS.gene066996:intron | 25.0% |
!!! | GGTTTTGTTAATGTAATTGA+AGG | - | chr1.3:12808998-12809017 | MS.gene066996:intron | 25.0% |
!!! | GTTACATTTGTTGTTGTTTT+TGG | - | chr1.3:12809416-12809435 | MS.gene066996:intron | 25.0% |
!!! | TCAATTTGGTTTAGGTTTTT+AGG | - | chr1.3:12808976-12808995 | MS.gene066996:CDS | 25.0% |
!!! | TGGATTTTGACAGAAAATAT+TGG | + | chr1.3:12812187-12812206 | None:intergenic | 25.0% |
!!! | TTTGTTGTTGTTTTTGGAAT+GGG | - | chr1.3:12809422-12809441 | MS.gene066996:intron | 25.0% |
AAAAGGAGCAAGAGAAAAAT+GGG | - | chr1.3:12812822-12812841 | MS.gene066996:intron | 30.0% | |
AAATAGGGCAAAATGGTAAA+AGG | + | chr1.3:12808950-12808969 | None:intergenic | 30.0% | |
AACAGAACAACATAAATCGA+AGG | + | chr1.3:12811038-12811057 | None:intergenic | 30.0% | |
AACCTTCAAATATTAACCAC+GGG | + | chr1.3:12811780-12811799 | None:intergenic | 30.0% | |
AAGCAAAAATTAGTGTATGC+GGG | - | chr1.3:12812014-12812033 | MS.gene066996:intron | 30.0% | |
AGCTTCACAGTATATTCAAA+TGG | + | chr1.3:12811492-12811511 | None:intergenic | 30.0% | |
ATCCTACCAAAATGTAAACT+AGG | - | chr1.3:12810323-12810342 | MS.gene066996:intron | 30.0% | |
ATCTATGAACATGCTTACTT+TGG | + | chr1.3:12812059-12812078 | None:intergenic | 30.0% | |
ATTTACTAACTTCTACCTGT+GGG | - | chr1.3:12812343-12812362 | MS.gene066996:intron | 30.0% | |
CCCAATGAACAAAATTTCAA+GGG | + | chr1.3:12811258-12811277 | None:intergenic | 30.0% | |
CCCACTAAAATTGAATTGAA+TGG | + | chr1.3:12809484-12809503 | None:intergenic | 30.0% | |
GAAAAATCTCGTAAGAATGT+GGG | - | chr1.3:12812475-12812494 | MS.gene066996:intron | 30.0% | |
GAAGCAAAAATTAGTGTATG+CGG | - | chr1.3:12812013-12812032 | MS.gene066996:intron | 30.0% | |
GGCGAGACTTATTAATTAAA+TGG | + | chr1.3:12809564-12809583 | None:intergenic | 30.0% | |
GTTAAATTAAAGTTAGCGAG+TGG | - | chr1.3:12810814-12810833 | MS.gene066996:intron | 30.0% | |
TAATTAATAAGTCTCGCCAT+TGG | - | chr1.3:12809566-12809585 | MS.gene066996:intron | 30.0% | |
TACCAATCAAGAATAAGTCT+CGG | + | chr1.3:12813708-12813727 | None:intergenic | 30.0% | |
TACTGTTAGAATGTAAACCA+CGG | + | chr1.3:12811607-12811626 | None:intergenic | 30.0% | |
TAGGTACATGTATACGTATA+CGG | + | chr1.3:12809372-12809391 | None:intergenic | 30.0% | |
TCCTACCAAAATGTAAACTA+GGG | - | chr1.3:12810324-12810343 | MS.gene066996:intron | 30.0% | |
TGAAAAATCTCGTAAGAATG+TGG | - | chr1.3:12812474-12812493 | MS.gene066996:intron | 30.0% | |
TGAGTTAAAGATCTAAACCA+CGG | + | chr1.3:12813217-12813236 | None:intergenic | 30.0% | |
TTCTTGATTGGTATGTAATC+AGG | - | chr1.3:12813715-12813734 | MS.gene066996:intron | 30.0% | |
TTGAGTGCAAATACAAGTTT+CGG | + | chr1.3:12810092-12810111 | None:intergenic | 30.0% | |
! | AAATAGTTTGGAGTATAGTC+TGG | - | chr1.3:12811824-12811843 | MS.gene066996:intron | 30.0% |
! | ATAGTGGAAAAAAACTTGTC+TGG | - | chr1.3:12809622-12809641 | MS.gene066996:intron | 30.0% |
! | ATCACTATCGTGTTTTATGT+CGG | + | chr1.3:12809043-12809062 | None:intergenic | 30.0% |
! | CCCTTGAAATTTTGTTCATT+GGG | - | chr1.3:12811255-12811274 | MS.gene066996:CDS | 30.0% |
! | GAGACTTTTTGATCTAATAG+TGG | - | chr1.3:12809606-12809625 | MS.gene066996:intron | 30.0% |
! | GCCATTCAATTCAATTTTAG+TGG | - | chr1.3:12809480-12809499 | MS.gene066996:intron | 30.0% |
! | TCCCTTGAAATTTTGTTCAT+TGG | - | chr1.3:12811254-12811273 | MS.gene066996:CDS | 30.0% |
! | TCCTAAAGACTATAGTTTGT+TGG | - | chr1.3:12810252-12810271 | MS.gene066996:CDS | 30.0% |
! | TGAAACTTTCTAAGAGTAGA+TGG | - | chr1.3:12811211-12811230 | MS.gene066996:CDS | 30.0% |
! | TGCTTTCATTTTATGGTTAG+GGG | + | chr1.3:12812569-12812588 | None:intergenic | 30.0% |
!! | CCTAAAGACTATAGTTTGTT+GGG | - | chr1.3:12810253-12810272 | MS.gene066996:CDS | 30.0% |
!! | TTTTGTTTGTTTGAAACTGC+AGG | - | chr1.3:12808842-12808861 | MS.gene066996:intron | 30.0% |
!!! | AGGTTTACCCTACTTTTTAT+TGG | + | chr1.3:12809766-12809785 | None:intergenic | 30.0% |
!!! | ATTTTAGTGGGTTAGTTCTA+TGG | - | chr1.3:12809493-12809512 | MS.gene066996:intron | 30.0% |
!!! | ATTTTTTTCTCTCACTTTGC+TGG | - | chr1.3:12810760-12810779 | MS.gene066996:CDS | 30.0% |
!!! | CTGATTTTAGGACACTAAAA+TGG | + | chr1.3:12809681-12809700 | None:intergenic | 30.0% |
AAAGGAGCAAGAGAAAAATG+GGG | - | chr1.3:12812823-12812842 | MS.gene066996:intron | 35.0% | |
AAAGTAGGGTAAACCTTAGT+TGG | - | chr1.3:12809770-12809789 | MS.gene066996:CDS | 35.0% | |
AAGGCTATAACTAAGCCTTT+AGG | + | chr1.3:12812626-12812645 | None:intergenic | 35.0% | |
AAGTAAAACTAACCGGTAAC+TGG | + | chr1.3:12813486-12813505 | None:intergenic | 35.0% | |
ACCAATCAAGAATAAGTCTC+GGG | + | chr1.3:12813707-12813726 | None:intergenic | 35.0% | |
ACTGTCAATGAAAGTGAAGA+TGG | - | chr1.3:12808918-12808937 | MS.gene066996:intron | 35.0% | |
AGATTACTCTTTAGGTGAGT+TGG | - | chr1.3:12809907-12809926 | MS.gene066996:CDS | 35.0% | |
AGGCTATAACTAAGCCTTTA+GGG | + | chr1.3:12812625-12812644 | None:intergenic | 35.0% | |
AGTTTCTTCCTTAACATCAG+CGG | + | chr1.3:12810513-12810532 | None:intergenic | 35.0% | |
ATCCCGTGGTTAATATTTGA+AGG | - | chr1.3:12811775-12811794 | MS.gene066996:intron | 35.0% | |
ATCTGATGAGAACTCAACAA+GGG | + | chr1.3:12811973-12811992 | None:intergenic | 35.0% | |
CATTTACTAACTTCTACCTG+TGG | - | chr1.3:12812342-12812361 | MS.gene066996:intron | 35.0% | |
CCAGTAAAATTGTGAAGTAC+CGG | - | chr1.3:12809112-12809131 | MS.gene066996:intron | 35.0% | |
CCCAACAAACTATAGTCTTT+AGG | + | chr1.3:12810256-12810275 | None:intergenic | 35.0% | |
CGTAATAGAGACAATGATTC+TGG | - | chr1.3:12813963-12813982 | MS.gene066996:intron | 35.0% | |
CTAGAGCTTTGCAAAGAAAT+TGG | + | chr1.3:12810872-12810891 | None:intergenic | 35.0% | |
CTCATGTTTACCAGAATCAT+AGG | + | chr1.3:12811727-12811746 | None:intergenic | 35.0% | |
CTGAAATTCTAACTACACAG+TGG | - | chr1.3:12810418-12810437 | MS.gene066996:intron | 35.0% | |
GAAAAGGAGCAAGAGAAAAA+TGG | - | chr1.3:12812821-12812840 | MS.gene066996:intron | 35.0% | |
GAAACAAAATGTCACGTATG+TGG | + | chr1.3:12811327-12811346 | None:intergenic | 35.0% | |
GATTACTCTTTAGGTGAGTT+GGG | - | chr1.3:12809908-12809927 | MS.gene066996:CDS | 35.0% | |
GCCCAATGAACAAAATTTCA+AGG | + | chr1.3:12811259-12811278 | None:intergenic | 35.0% | |
GTGAAGCTGAAAAACAATAC+TGG | - | chr1.3:12813737-12813756 | MS.gene066996:intron | 35.0% | |
TACATGTACCTATGCAACAT+AGG | - | chr1.3:12809380-12809399 | MS.gene066996:intron | 35.0% | |
TATATTTACTCAATGCAGGC+AGG | - | chr1.3:12812414-12812433 | MS.gene066996:intron | 35.0% | |
TATTGTTACAGCTACCCTAA+AGG | - | chr1.3:12812608-12812627 | MS.gene066996:intron | 35.0% | |
TCACATACATATGAGAGTGA+AGG | + | chr1.3:12809452-12809471 | None:intergenic | 35.0% | |
TCACTCAAAACGAGAAAAAG+TGG | + | chr1.3:12809171-12809190 | None:intergenic | 35.0% | |
TCATATCTCACTTGAACCAA+TGG | + | chr1.3:12809585-12809604 | None:intergenic | 35.0% | |
TGTCTTACGTGAAGATTTGA+AGG | - | chr1.3:12812988-12813007 | MS.gene066996:intron | 35.0% | |
TTACTCAAGAAATCATCCCT+GGG | + | chr1.3:12808897-12808916 | None:intergenic | 35.0% | |
TTTACTAACTTCTACCTGTG+GGG | - | chr1.3:12812344-12812363 | MS.gene066996:intron | 35.0% | |
TTTACTCAAGAAATCATCCC+TGG | + | chr1.3:12808898-12808917 | None:intergenic | 35.0% | |
TTTGCTGGCCAATTAAGAAT+AGG | - | chr1.3:12810775-12810794 | MS.gene066996:CDS | 35.0% | |
! | AAAGTTTAGGACTCTGTTAG+TGG | + | chr1.3:12810006-12810025 | None:intergenic | 35.0% |
! | AAGTTTAGGACTCTGTTAGT+GGG | + | chr1.3:12810005-12810024 | None:intergenic | 35.0% |
! | AATAGGATAGATTGCTGTTC+TGG | - | chr1.3:12810792-12810811 | MS.gene066996:CDS | 35.0% |
! | ACTTTTTGTCTCCAACATGA+CGG | + | chr1.3:12811935-12811954 | None:intergenic | 35.0% |
! | CTATAGTCTTTAGGAGAAGT+TGG | + | chr1.3:12810247-12810266 | None:intergenic | 35.0% |
! | CTTTGCTTTGTTCCTTCAAT+CGG | - | chr1.3:12810450-12810469 | MS.gene066996:intron | 35.0% |
! | GTCACGTCATTATTCTTTTC+TGG | + | chr1.3:12812677-12812696 | None:intergenic | 35.0% |
! | TAACTACACAGTGGTTAGTT+TGG | - | chr1.3:12810427-12810446 | MS.gene066996:intron | 35.0% |
! | TGGTGATGTGAAGGTAAATA+TGG | - | chr1.3:12813027-12813046 | MS.gene066996:intron | 35.0% |
!! | TAAGAAAATTGAAGTACCGG+CGG | - | chr1.3:12809087-12809106 | MS.gene066996:intron | 35.0% |
!! | TATTAATACCTTTTCAGGGG+AGG | - | chr1.3:12813909-12813928 | MS.gene066996:intron | 35.0% |
!! | TCCCTAGTTTACATTTTGGT+AGG | + | chr1.3:12810328-12810347 | None:intergenic | 35.0% |
!! | TGAACTGCTCTTTAGTTTGA+AGG | + | chr1.3:12812645-12812664 | None:intergenic | 35.0% |
!!! | GTTTTTTATAAAGGGATGCC+AGG | + | chr1.3:12812311-12812330 | None:intergenic | 35.0% |
!!! | TCTCTATTTTTTGGGATCAC+CGG | - | chr1.3:12813854-12813873 | MS.gene066996:CDS | 35.0% |
!!! | TTGTTTTAATAACCTGACCG+TGG | - | chr1.3:12813197-12813216 | MS.gene066996:intron | 35.0% |
AAATCGAGTCACACCAACTA+AGG | + | chr1.3:12809786-12809805 | None:intergenic | 40.0% | |
AAATGGGGTGAAGGAAGAAA+AGG | - | chr1.3:12812838-12812857 | MS.gene066996:intron | 40.0% | |
AACCAAGAAGGTTATACGAC+AGG | - | chr1.3:12808752-12808771 | MS.gene066996:CDS | 40.0% | |
AACCTGTCGTATAACCTTCT+TGG | + | chr1.3:12808757-12808776 | None:intergenic | 40.0% | |
AATCCCCACAACACATCTTT+GGG | - | chr1.3:12809842-12809861 | MS.gene066996:CDS | 40.0% | |
AATCTGGTATTTGAATCCCG+TGG | - | chr1.3:12811761-12811780 | MS.gene066996:intron | 40.0% | |
AGAAGAGCCAAGAAAACAAC+CGG | - | chr1.3:12812876-12812895 | MS.gene066996:intron | 40.0% | |
CAGTGATAGTAATCTTCCCA+GGG | - | chr1.3:12808878-12808897 | MS.gene066996:intron | 40.0% | |
CATCTGATGAGAACTCAACA+AGG | + | chr1.3:12811974-12811993 | None:intergenic | 40.0% | |
CATTCTATTCGTGCATTCCA+GGG | - | chr1.3:12811385-12811404 | MS.gene066996:intron | 40.0% | |
CCAATCAAGAATAAGTCTCG+GGG | + | chr1.3:12813706-12813725 | None:intergenic | 40.0% | |
CTAAAGAGTAATCTCCGCTA+AGG | + | chr1.3:12809901-12809920 | None:intergenic | 40.0% | |
CTTAGCGGAGATTACTCTTT+AGG | - | chr1.3:12809899-12809918 | MS.gene066996:CDS | 40.0% | |
CTTGGTGAAAAGTTGAAGCA+TGG | - | chr1.3:12811701-12811720 | MS.gene066996:intron | 40.0% | |
CTTTGACGCAGAAAGAGAAA+AGG | - | chr1.3:12812438-12812457 | MS.gene066996:intron | 40.0% | |
GAAAACAATGGAGTGAACGA+AGG | - | chr1.3:12812779-12812798 | MS.gene066996:intron | 40.0% | |
GAGATGAGTCAGGATTCATT+CGG | - | chr1.3:12813364-12813383 | MS.gene066996:intron | 40.0% | |
GCTTTCGATCAGACAAGTTT+CGG | + | chr1.3:12810035-12810054 | None:intergenic | 40.0% | |
GGAGACAAAAAGTTCTTCTG+TGG | - | chr1.3:12811942-12811961 | MS.gene066996:intron | 40.0% | |
GGTAGGATATCTCTGTAAGT+GGG | + | chr1.3:12810311-12810330 | None:intergenic | 40.0% | |
GTAGGATATCTCTGTAAGTG+GGG | + | chr1.3:12810310-12810329 | None:intergenic | 40.0% | |
GTCGACTACAACAGTATAGA+AGG | + | chr1.3:12810850-12810869 | None:intergenic | 40.0% | |
GTCTGGTACAACACTATTAG+TGG | - | chr1.3:12809639-12809658 | MS.gene066996:intron | 40.0% | |
GTGAGTGATTATGATTCTCC+TGG | - | chr1.3:12812290-12812309 | MS.gene066996:intron | 40.0% | |
GTTTCTTCCTTAACATCAGC+GGG | + | chr1.3:12810512-12810531 | None:intergenic | 40.0% | |
TAAAGATCTAAACCACGGTC+AGG | + | chr1.3:12813212-12813231 | None:intergenic | 40.0% | |
TACTGTGAAGCTTGAAGAAG+TGG | - | chr1.3:12811500-12811519 | MS.gene066996:intron | 40.0% | |
TATTTGTGTTATCCTCCTCG+TGG | + | chr1.3:12812507-12812526 | None:intergenic | 40.0% | |
TCACTCAAGCTATCAGAAGA+TGG | - | chr1.3:12810569-12810588 | MS.gene066996:intron | 40.0% | |
TCAGTGATAGTAATCTTCCC+AGG | - | chr1.3:12808877-12808896 | MS.gene066996:intron | 40.0% | |
TCATTCTATTCGTGCATTCC+AGG | - | chr1.3:12811384-12811403 | MS.gene066996:intron | 40.0% | |
TCTAATCAGGCAACTGCAAT+AGG | - | chr1.3:12810667-12810686 | MS.gene066996:intron | 40.0% | |
TGACGAAGAAACAACCAAGA+AGG | - | chr1.3:12808740-12808759 | MS.gene066996:CDS | 40.0% | |
TGGTAGGATATCTCTGTAAG+TGG | + | chr1.3:12810312-12810331 | None:intergenic | 40.0% | |
TTCAATATGGGAGATGAGTC+AGG | - | chr1.3:12813354-12813373 | MS.gene066996:intron | 40.0% | |
TTTCAACCTAAGCACCTTAG+CGG | - | chr1.3:12809884-12809903 | MS.gene066996:CDS | 40.0% | |
! | CATAAAGCATCATTACTCGG+AGG | + | chr1.3:12811665-12811684 | None:intergenic | 40.0% |
! | CCGGTACTTCACAATTTTAC+TGG | + | chr1.3:12809115-12809134 | None:intergenic | 40.0% |
! | CTTTTTGTCTCCAACATGAC+GGG | + | chr1.3:12811934-12811953 | None:intergenic | 40.0% |
! | GATTTCAGGTCAACAGTGTT+CGG | - | chr1.3:12811904-12811923 | MS.gene066996:intron | 40.0% |
! | GGGTTTTTGCTCATCTGTTT+TGG | + | chr1.3:12812699-12812718 | None:intergenic | 40.0% |
! | GTCTGTTTGGTTCAAACAAG+AGG | + | chr1.3:12813684-12813703 | None:intergenic | 40.0% |
! | TATCTTGTTTACCACGAAGC+TGG | + | chr1.3:12813765-12813784 | None:intergenic | 40.0% |
! | TCTGTTAGTGGGTAATCTGT+TGG | + | chr1.3:12809994-12810013 | None:intergenic | 40.0% |
! | TTTTTGTCTCCAACATGACG+GGG | + | chr1.3:12811933-12811952 | None:intergenic | 40.0% |
!! | AAAGTTTTAGCAACCGAGGA+AGG | - | chr1.3:12813794-12813813 | MS.gene066996:intron | 40.0% |
!! | AGAGAAAGTTTTAGCAACCG+AGG | - | chr1.3:12813790-12813809 | MS.gene066996:intron | 40.0% |
!! | GATGCGAAAGCATCTTAAGT+TGG | - | chr1.3:12810472-12810491 | MS.gene066996:intron | 40.0% |
!! | GGTGTGACTCGATTTTTAAG+CGG | - | chr1.3:12809791-12809810 | MS.gene066996:CDS | 40.0% |
!! | GTAAAATTGTGAAGTACCGG+CGG | - | chr1.3:12809115-12809134 | MS.gene066996:intron | 40.0% |
!! | GTTTCGGTGCTACAAAGTTT+AGG | + | chr1.3:12810019-12810038 | None:intergenic | 40.0% |
!! | TCAATTACCTCTTCTGGCTT+GGG | + | chr1.3:12811438-12811457 | None:intergenic | 40.0% |
!!! | CTCTATTTTTTGGGATCACC+GGG | - | chr1.3:12813855-12813874 | MS.gene066996:CDS | 40.0% |
!!! | CTGTTTTTTTCCCAGTTTCC+TGG | + | chr1.3:12812940-12812959 | None:intergenic | 40.0% |
!!! | TCTATTTTTTGGGATCACCG+GGG | - | chr1.3:12813856-12813875 | MS.gene066996:CDS | 40.0% |
AATAAGTCTCGGGGTCTGTT+TGG | + | chr1.3:12813697-12813716 | None:intergenic | 45.0% | |
ACCTGCTCAATTACCTCTTC+TGG | + | chr1.3:12811444-12811463 | None:intergenic | 45.0% | |
AGAGACAATGATTCTGGACG+AGG | - | chr1.3:12813969-12813988 | MS.gene066996:CDS | 45.0% | |
AGTTGAACATATGCCCTTGC+GGG | - | chr1.3:12810214-12810233 | MS.gene066996:CDS | 45.0% | |
ATCCCCACAACACATCTTTG+GGG | - | chr1.3:12809843-12809862 | MS.gene066996:CDS | 45.0% | |
ATCTTCCGTACCTGTTGCAT+AGG | - | chr1.3:12809344-12809363 | MS.gene066996:CDS | 45.0% | |
ATGCAACATAGGTCGATGTC+TGG | - | chr1.3:12809391-12809410 | MS.gene066996:intron | 45.0% | |
ATGCTTTCGCATCCGATTGA+AGG | + | chr1.3:12810465-12810484 | None:intergenic | 45.0% | |
CAACTCCTGTTGTCAACGTT+GGG | + | chr1.3:12810199-12810218 | None:intergenic | 45.0% | |
CAATCCCCACAACACATCTT+TGG | - | chr1.3:12809841-12809860 | MS.gene066996:CDS | 45.0% | |
CAATGGAGTGAACGAAGGAA+AGG | - | chr1.3:12812784-12812803 | MS.gene066996:intron | 45.0% | |
CCCCGAGACTTATTCTTGAT+TGG | - | chr1.3:12813703-12813722 | MS.gene066996:intron | 45.0% | |
CTATGGTGCACAAGTGAGAT+AGG | - | chr1.3:12809510-12809529 | MS.gene066996:intron | 45.0% | |
CTGTTGGGACTTTCTTCCTT+TGG | - | chr1.3:12813067-12813086 | MS.gene066996:intron | 45.0% | |
CTTCTTCGGTCAATATGCCA+AGG | - | chr1.3:12811527-12811546 | MS.gene066996:intron | 45.0% | |
CTTGGCATATTGACCGAAGA+AGG | + | chr1.3:12811529-12811548 | None:intergenic | 45.0% | |
GAAGAAGTGGAGTCCTTCTT+CGG | - | chr1.3:12811513-12811532 | MS.gene066996:intron | 45.0% | |
GAAGAGCCAAGAAAACAACC+GGG | - | chr1.3:12812877-12812896 | MS.gene066996:intron | 45.0% | |
GACATCGACCTATGTTGCAT+AGG | + | chr1.3:12809391-12809410 | None:intergenic | 45.0% | |
GAGTTGAACATATGCCCTTG+CGG | - | chr1.3:12810213-12810232 | MS.gene066996:CDS | 45.0% | |
GCAAGAGAAAAATGGGGTGA+AGG | - | chr1.3:12812829-12812848 | MS.gene066996:intron | 45.0% | |
GCTACTCTAGATCCAGTTAC+CGG | - | chr1.3:12813471-12813490 | MS.gene066996:intron | 45.0% | |
GTATACGGTACCTATGCAAC+AGG | + | chr1.3:12809357-12809376 | None:intergenic | 45.0% | |
TACTAAGCCCGCTGATGTTA+AGG | - | chr1.3:12810502-12810521 | MS.gene066996:intron | 45.0% | |
TCAACTCCTGTTGTCAACGT+TGG | + | chr1.3:12810200-12810219 | None:intergenic | 45.0% | |
TCTGGTGTTCGTGTTAGTGT+CGG | - | chr1.3:12810161-12810180 | MS.gene066996:intron | 45.0% | |
TGAAGCATGGCCTATGATTC+TGG | - | chr1.3:12811714-12811733 | MS.gene066996:intron | 45.0% | |
TGATGTGTCAGAATCGTGTC+TGG | - | chr1.3:12810143-12810162 | MS.gene066996:intron | 45.0% | |
TGTCAGACACAGACATGTGT+TGG | + | chr1.3:12810069-12810088 | None:intergenic | 45.0% | |
! | AGTTTGAGTTTCACTACCCC+CGG | + | chr1.3:12813876-12813895 | None:intergenic | 45.0% |
! | CACAATTTTACTGGTACCGC+CGG | + | chr1.3:12809106-12809125 | None:intergenic | 45.0% |
! | CTCAATTACCTCTTCTGGCT+TGG | + | chr1.3:12811439-12811458 | None:intergenic | 45.0% |
! | TAATCTCCGCTAAGGTGCTT+AGG | + | chr1.3:12809893-12809912 | None:intergenic | 45.0% |
! | TTTTAAGCGGCTGACCTTGT+GGG | - | chr1.3:12809804-12809823 | MS.gene066996:CDS | 45.0% |
!! | AGTTTGTTGGGATGCTCTGT+GGG | - | chr1.3:12810265-12810284 | MS.gene066996:CDS | 45.0% |
!! | TAATACCTTTTCAGGGGAGG+AGG | - | chr1.3:12813912-12813931 | MS.gene066996:intron | 45.0% |
!! | TAGTTTGTTGGGATGCTCTG+TGG | - | chr1.3:12810264-12810283 | MS.gene066996:CDS | 45.0% |
!! | TTTTTAAGCGGCTGACCTTG+TGG | - | chr1.3:12809803-12809822 | MS.gene066996:CDS | 45.0% |
!!! | CTATTTTTTGGGATCACCGG+GGG | - | chr1.3:12813857-12813876 | MS.gene066996:CDS | 45.0% |
!! | ATAATATTATAATTTCTTAT+AGG | - | chr1.3:12812139-12812158 | MS.gene066996:intron | 5.0% |
!!! | ATATATATTTTTTTTTTTGA+AGG | + | chr1.3:12811573-12811592 | None:intergenic | 5.0% |
!!! | ATTTTTAAAAAATTAAAGTT+TGG | + | chr1.3:12809318-12809337 | None:intergenic | 5.0% |
!!! | TTTTTAAAAAATTAAAGTTT+GGG | + | chr1.3:12809317-12809336 | None:intergenic | 5.0% |
AACGAAGGAAAGGAGGCTGA+AGG | - | chr1.3:12812794-12812813 | MS.gene066996:intron | 50.0% | |
AAGTCCCAACAGCTGGAGAA+CGG | + | chr1.3:12813059-12813078 | None:intergenic | 50.0% | |
AGGAAGAAAGTCCCAACAGC+TGG | + | chr1.3:12813066-12813085 | None:intergenic | 50.0% | |
ATCTCTGTAAGTGGGGCCTT+TGG | + | chr1.3:12810303-12810322 | None:intergenic | 50.0% | |
CAACATAGGTCGATGTCTGG+CGG | - | chr1.3:12809394-12809413 | MS.gene066996:intron | 50.0% | |
CCTCCCCAAAGATGTGTTGT+GGG | + | chr1.3:12809849-12809868 | None:intergenic | 50.0% | |
CGGTACCTATGCAACAGGTA+CGG | + | chr1.3:12809352-12809371 | None:intergenic | 50.0% | |
CTCCCCAAAGATGTGTTGTG+GGG | + | chr1.3:12809848-12809867 | None:intergenic | 50.0% | |
GCATCATTACTCGGAGGCTA+AGG | + | chr1.3:12811659-12811678 | None:intergenic | 50.0% | |
GCCAGAAGAGGTAATTGAGC+AGG | - | chr1.3:12811440-12811459 | MS.gene066996:intron | 50.0% | |
GGTGAAGGAAAGGTGACTGA+AGG | - | chr1.3:12812902-12812921 | MS.gene066996:intron | 50.0% | |
GTTGAACATATGCCCTTGCG+GGG | - | chr1.3:12810215-12810234 | MS.gene066996:CDS | 50.0% | |
TAGCAACCGAGGAAGGTAAG+TGG | - | chr1.3:12813801-12813820 | MS.gene066996:CDS | 50.0% | |
TCCTCAGCAGCAACTTCAGA+GGG | + | chr1.3:12812719-12812738 | None:intergenic | 50.0% | |
TGAACTTCCCAAGCCAGAAG+AGG | - | chr1.3:12811428-12811447 | MS.gene066996:intron | 50.0% | |
TGCATTCCAGGGAGCAAAGT+TGG | - | chr1.3:12811396-12811415 | MS.gene066996:intron | 50.0% | |
TGGAGTGAACGAAGGAAAGG+AGG | - | chr1.3:12812787-12812806 | MS.gene066996:intron | 50.0% | |
TGTGTTATCCTCCTCGTGGT+TGG | + | chr1.3:12812503-12812522 | None:intergenic | 50.0% | |
TTCCTCAGCAGCAACTTCAG+AGG | + | chr1.3:12812720-12812739 | None:intergenic | 50.0% | |
TTTAAGCGGCTGACCTTGTG+GGG | - | chr1.3:12809805-12809824 | MS.gene066996:CDS | 50.0% | |
TTTCCCGTTCTCCAGCTGTT+GGG | - | chr1.3:12813052-12813071 | MS.gene066996:intron | 50.0% | |
! | CACAACACATCTTTGGGGAG+GGG | - | chr1.3:12809848-12809867 | MS.gene066996:CDS | 50.0% |
! | CCACAACACATCTTTGGGGA+GGG | - | chr1.3:12809847-12809866 | MS.gene066996:CDS | 50.0% |
! | GTTTGTTGGGATGCTCTGTG+GGG | - | chr1.3:12810266-12810285 | MS.gene066996:CDS | 50.0% |
! | TAAGCCCCCCTTTTCCGAAA+GGG | + | chr1.3:12813433-12813452 | None:intergenic | 50.0% |
! | TGTCTGATCGAAAGCGTGTC+CGG | - | chr1.3:12810040-12810059 | MS.gene066996:CDS | 50.0% |
! | TTAGGTGAGTTGGGTCCCTT+GGG | - | chr1.3:12809917-12809936 | MS.gene066996:CDS | 50.0% |
! | TTTAGGTGAGTTGGGTCCCT+TGG | - | chr1.3:12809916-12809935 | MS.gene066996:CDS | 50.0% |
! | TTTTCCCGTTCTCCAGCTGT+TGG | - | chr1.3:12813051-12813070 | MS.gene066996:intron | 50.0% |
!! | GTGACTGAAGGTGCCGAAAA+GGG | - | chr1.3:12812914-12812933 | MS.gene066996:intron | 50.0% |
!! | TGTTAGTGTCGGTGCTTCAC+AGG | - | chr1.3:12810172-12810191 | MS.gene066996:intron | 50.0% |
AAGACTGTCTTACGCCCCAC+AGG | + | chr1.3:12812361-12812380 | None:intergenic | 55.0% | |
AATAGCAGTCCTCCCCCACA+AGG | + | chr1.3:12809821-12809840 | None:intergenic | 55.0% | |
ACCTTCCTCCTCCCCTGAAA+AGG | + | chr1.3:12813920-12813939 | None:intergenic | 55.0% | |
AGCCAAGAAAACAACCGGGC+AGG | - | chr1.3:12812881-12812900 | MS.gene066996:intron | 55.0% | |
AGTCCCAACAGCTGGAGAAC+GGG | + | chr1.3:12813058-12813077 | None:intergenic | 55.0% | |
ATCCTGCCAACTTTGCTCCC+TGG | + | chr1.3:12811405-12811424 | None:intergenic | 55.0% | |
CAATACTGGAGCCAGCTTCG+TGG | - | chr1.3:12813751-12813770 | MS.gene066996:intron | 55.0% | |
CAGGTCCCAACGTTGACAAC+AGG | - | chr1.3:12810191-12810210 | MS.gene066996:intron | 55.0% | |
CCCTCCCCAAAGATGTGTTG+TGG | + | chr1.3:12809850-12809869 | None:intergenic | 55.0% | |
CCGAAAAGGGCCAGGAAACT+GGG | - | chr1.3:12812927-12812946 | MS.gene066996:intron | 55.0% | |
CGAGAAAAAGTGGAGTCCCG+CGG | + | chr1.3:12809161-12809180 | None:intergenic | 55.0% | |
CGTGCTTTCTGAGCAGCTTC+AGG | + | chr1.3:12813399-12813418 | None:intergenic | 55.0% | |
CTGCAGCCCTTTCGGAAAAG+GGG | - | chr1.3:12813424-12813443 | MS.gene066996:intron | 55.0% | |
GAAAACAACCGGGCAGGTGA+AGG | - | chr1.3:12812887-12812906 | MS.gene066996:intron | 55.0% | |
GAATGTGGGTTCCAACCACG+AGG | - | chr1.3:12812489-12812508 | MS.gene066996:intron | 55.0% | |
GCTGCAGCCCTTTCGGAAAA+GGG | - | chr1.3:12813423-12813442 | MS.gene066996:intron | 55.0% | |
GGAGGCTGAAGGCGAAGAAA+AGG | - | chr1.3:12812805-12812824 | MS.gene066996:intron | 55.0% | |
TCACCTTTCCTTCACCTGCC+CGG | + | chr1.3:12812898-12812917 | None:intergenic | 55.0% | |
TGCAGCCCTTTCGGAAAAGG+GGG | - | chr1.3:12813425-12813444 | MS.gene066996:intron | 55.0% | |
TGCTGCAGCCCTTTCGGAAA+AGG | - | chr1.3:12813422-12813441 | MS.gene066996:intron | 55.0% | |
TTAAGCGGCTGACCTTGTGG+GGG | - | chr1.3:12809806-12809825 | MS.gene066996:CDS | 55.0% | |
TTCAGGGGAGGAGGAAGGTA+TGG | - | chr1.3:12813921-12813940 | MS.gene066996:intron | 55.0% | |
TTCCAGGGAGCAAAGTTGGC+AGG | - | chr1.3:12811400-12811419 | MS.gene066996:intron | 55.0% | |
! | AAGTTGGCTCATACCCCGCA+AGG | + | chr1.3:12810231-12810250 | None:intergenic | 55.0% |
! | AGTTGGCTCATACCCCGCAA+GGG | + | chr1.3:12810230-12810249 | None:intergenic | 55.0% |
! | CACAGACATGTGTTGGCCAC+CGG | + | chr1.3:12810062-12810081 | None:intergenic | 55.0% |
! | CCCACAACACATCTTTGGGG+AGG | - | chr1.3:12809846-12809865 | MS.gene066996:CDS | 55.0% |
! | CCCAGTTTCCTGGCCCTTTT+CGG | + | chr1.3:12812930-12812949 | None:intergenic | 55.0% |
! | CTAAGCCCCCCTTTTCCGAA+AGG | + | chr1.3:12813434-12813453 | None:intergenic | 55.0% |
! | GGAGGAAGGTATGGTAGAGG+AGG | - | chr1.3:12813930-12813949 | MS.gene066996:intron | 55.0% |
! | GGAGGAGGAAGGTATGGTAG+AGG | - | chr1.3:12813927-12813946 | MS.gene066996:intron | 55.0% |
!! | ACCCTCTGAAGTTGCTGCTG+AGG | - | chr1.3:12812715-12812734 | MS.gene066996:intron | 55.0% |
!! | ACCTTTTCAGGGGAGGAGGA+AGG | - | chr1.3:12813916-12813935 | MS.gene066996:intron | 55.0% |
!! | CACCTGCCCGGTTGTTTTCT+TGG | + | chr1.3:12812886-12812905 | None:intergenic | 55.0% |
!! | CGGGCGCTGAGCTAGAATTA+AGG | - | chr1.3:12812033-12812052 | MS.gene066996:intron | 55.0% |
!! | GGTGACTGAAGGTGCCGAAA+AGG | - | chr1.3:12812913-12812932 | MS.gene066996:intron | 55.0% |
!! | TGCGTGCCACTTACCTTCCT+CGG | + | chr1.3:12813810-12813829 | None:intergenic | 55.0% |
CAACCGGGCAGGTGAAGGAA+AGG | - | chr1.3:12812892-12812911 | MS.gene066996:intron | 60.0% | |
CCTGACCCTAGTCAGCCCAA+GGG | + | chr1.3:12809935-12809954 | None:intergenic | 60.0% | |
CCTTGGGCTGACTAGGGTCA+GGG | - | chr1.3:12809933-12809952 | MS.gene066996:CDS | 60.0% | |
GCAGCCCTTTCGGAAAAGGG+GGG | - | chr1.3:12813426-12813445 | MS.gene066996:intron | 60.0% | |
GCCGAAAAGGGCCAGGAAAC+TGG | - | chr1.3:12812926-12812945 | MS.gene066996:intron | 60.0% | |
GTTCGGTTGCCCCGTCATGT+TGG | - | chr1.3:12811921-12811940 | MS.gene066996:intron | 60.0% | |
TAGGGTCAGGGTAGGCCTCA+AGG | - | chr1.3:12809945-12809964 | MS.gene066996:CDS | 60.0% | |
TCAGCGCTCTGTGAGCCTTG+AGG | + | chr1.3:12809963-12809982 | None:intergenic | 60.0% | |
TGGGGCCACTGTGGTACCAA+AGG | - | chr1.3:12810284-12810303 | MS.gene066996:CDS | 60.0% | |
TGGGGCCTTTGGTACCACAG+TGG | + | chr1.3:12810292-12810311 | None:intergenic | 60.0% | |
TGGGTCCCTTGGGCTGACTA+GGG | - | chr1.3:12809927-12809946 | MS.gene066996:CDS | 60.0% | |
TGTGGGTTCCAACCACGAGG+AGG | - | chr1.3:12812492-12812511 | MS.gene066996:intron | 60.0% | |
TTGGGTCCCTTGGGCTGACT+AGG | - | chr1.3:12809926-12809945 | MS.gene066996:CDS | 60.0% | |
! | ACGTGCTGCTGCAGCCCTTT+CGG | - | chr1.3:12813416-12813435 | MS.gene066996:intron | 60.0% |
! | CTGATCGAAAGCGTGTCCGG+TGG | - | chr1.3:12810043-12810062 | MS.gene066996:CDS | 60.0% |
!! | TGAAGGTGCCGAAAAGGGCC+AGG | - | chr1.3:12812919-12812938 | MS.gene066996:intron | 60.0% |
!! | TGTGAAGTACCGGCGGTACC+AGG | - | chr1.3:12809122-12809141 | MS.gene066996:intron | 60.0% |
AAGTGGAGTCCCGCGGTACC+AGG | + | chr1.3:12809154-12809173 | None:intergenic | 65.0% | |
AGGCACGTACCTGGTACCGC+CGG | + | chr1.3:12809134-12809153 | None:intergenic | 65.0% | |
AGGTACGTGCCTGGTACCGC+GGG | - | chr1.3:12809142-12809161 | MS.gene066996:intron | 65.0% | |
CAGGTACGTGCCTGGTACCG+CGG | - | chr1.3:12809141-12809160 | MS.gene066996:intron | 65.0% | |
CCCTGACCCTAGTCAGCCCA+AGG | + | chr1.3:12809936-12809955 | None:intergenic | 65.0% | |
CCCTTGGGCTGACTAGGGTC+AGG | - | chr1.3:12809932-12809951 | MS.gene066996:CDS | 65.0% | |
GATGCTCTGTGGGGCCACTG+TGG | - | chr1.3:12810275-12810294 | MS.gene066996:CDS | 65.0% | |
GGGCTGACTAGGGTCAGGGT+AGG | - | chr1.3:12809937-12809956 | MS.gene066996:CDS | 65.0% | |
AGCGGCTGACCTTGTGGGGG+AGG | - | chr1.3:12809809-12809828 | MS.gene066996:CDS | 70.0% | |
CGCGGTACCAGGCACGTACC+TGG | + | chr1.3:12809143-12809162 | None:intergenic | 70.0% | |
GGCGGTACCAGGTACGTGCC+TGG | - | chr1.3:12809133-12809152 | MS.gene066996:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.3 | gene | 12808723 | 12814019 | 12808723 | ID=MS.gene066996 |
chr1.3 | mRNA | 12808723 | 12814019 | 12808723 | ID=MS.gene066996.t1;Parent=MS.gene066996 |
chr1.3 | exon | 12813969 | 12814019 | 12813969 | ID=MS.gene066996.t1.exon1;Parent=MS.gene066996.t1 |
chr1.3 | CDS | 12813969 | 12814019 | 12813969 | ID=cds.MS.gene066996.t1;Parent=MS.gene066996.t1 |
chr1.3 | exon | 12813800 | 12813878 | 12813800 | ID=MS.gene066996.t1.exon2;Parent=MS.gene066996.t1 |
chr1.3 | CDS | 12813800 | 12813878 | 12813800 | ID=cds.MS.gene066996.t1;Parent=MS.gene066996.t1 |
chr1.3 | exon | 12812152 | 12812304 | 12812152 | ID=MS.gene066996.t1.exon3;Parent=MS.gene066996.t1 |
chr1.3 | CDS | 12812152 | 12812304 | 12812152 | ID=cds.MS.gene066996.t1;Parent=MS.gene066996.t1 |
chr1.3 | exon | 12811194 | 12811336 | 12811194 | ID=MS.gene066996.t1.exon4;Parent=MS.gene066996.t1 |
chr1.3 | CDS | 12811194 | 12811336 | 12811194 | ID=cds.MS.gene066996.t1;Parent=MS.gene066996.t1 |
chr1.3 | exon | 12810682 | 12810830 | 12810682 | ID=MS.gene066996.t1.exon5;Parent=MS.gene066996.t1 |
chr1.3 | CDS | 12810682 | 12810830 | 12810682 | ID=cds.MS.gene066996.t1;Parent=MS.gene066996.t1 |
chr1.3 | exon | 12810206 | 12810310 | 12810206 | ID=MS.gene066996.t1.exon6;Parent=MS.gene066996.t1 |
chr1.3 | CDS | 12810206 | 12810310 | 12810206 | ID=cds.MS.gene066996.t1;Parent=MS.gene066996.t1 |
chr1.3 | exon | 12809703 | 12810123 | 12809703 | ID=MS.gene066996.t1.exon7;Parent=MS.gene066996.t1 |
chr1.3 | CDS | 12809703 | 12810123 | 12809703 | ID=cds.MS.gene066996.t1;Parent=MS.gene066996.t1 |
chr1.3 | exon | 12809250 | 12809397 | 12809250 | ID=MS.gene066996.t1.exon8;Parent=MS.gene066996.t1 |
chr1.3 | CDS | 12809250 | 12809397 | 12809250 | ID=cds.MS.gene066996.t1;Parent=MS.gene066996.t1 |
chr1.3 | exon | 12808927 | 12809005 | 12808927 | ID=MS.gene066996.t1.exon9;Parent=MS.gene066996.t1 |
chr1.3 | CDS | 12808927 | 12809005 | 12808927 | ID=cds.MS.gene066996.t1;Parent=MS.gene066996.t1 |
chr1.3 | exon | 12808723 | 12808816 | 12808723 | ID=MS.gene066996.t1.exon10;Parent=MS.gene066996.t1 |
chr1.3 | CDS | 12808723 | 12808816 | 12808723 | ID=cds.MS.gene066996.t1;Parent=MS.gene066996.t1 |
Gene Sequence |
Protein sequence |