Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36492.t1 | XP_003608503.1 | 81.5 | 701 | 78 | 3 | 44 | 701 | 46 | 737 | 2.30E-217 | 765.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36492.t1 | O74828 | 28.2 | 709 | 387 | 13 | 47 | 678 | 19 | 682 | 2.6e-39 | 165.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36492.t1 | G7JDZ9 | 81.5 | 701 | 78 | 3 | 44 | 701 | 46 | 737 | 1.7e-217 | 765.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049824 | MS.gene36492 | 0.803012 | 4.27E-49 | -1.69E-46 |
| MS.gene049825 | MS.gene36492 | 0.838006 | 3.71E-57 | -1.69E-46 |
| MS.gene051700 | MS.gene36492 | 0.856637 | 2.81E-62 | -1.69E-46 |
| MS.gene051746 | MS.gene36492 | 0.810556 | 1.09E-50 | -1.69E-46 |
| MS.gene051748 | MS.gene36492 | 0.801411 | 9.12E-49 | -1.69E-46 |
| MS.gene05188 | MS.gene36492 | 0.817574 | 3.07E-52 | -1.69E-46 |
| MS.gene051975 | MS.gene36492 | 0.808461 | 3.06E-50 | -1.69E-46 |
| MS.gene052947 | MS.gene36492 | 0.827309 | 1.68E-54 | -1.69E-46 |
| MS.gene053226 | MS.gene36492 | 0.821445 | 4.02E-53 | -1.69E-46 |
| MS.gene05365 | MS.gene36492 | 0.80254 | 5.35E-49 | -1.69E-46 |
| MS.gene055313 | MS.gene36492 | 0.801819 | 7.52E-49 | -1.69E-46 |
| MS.gene055555 | MS.gene36492 | 0.847443 | 1.15E-59 | -1.69E-46 |
| MS.gene055603 | MS.gene36492 | 0.831228 | 1.88E-55 | -1.69E-46 |
| MS.gene055808 | MS.gene36492 | 0.821563 | 3.78E-53 | -1.69E-46 |
| MS.gene056091 | MS.gene36492 | 0.828279 | 9.82E-55 | -1.69E-46 |
| MS.gene056215 | MS.gene36492 | 0.800886 | 1.17E-48 | -1.69E-46 |
| MS.gene056403 | MS.gene36492 | 0.86784 | 1.02E-65 | -1.69E-46 |
| MS.gene056605 | MS.gene36492 | 0.871165 | 8.41E-67 | -1.69E-46 |
| MS.gene056631 | MS.gene36492 | 0.805516 | 1.29E-49 | -1.69E-46 |
| MS.gene05689 | MS.gene36492 | 0.84646 | 2.14E-59 | -1.69E-46 |
| MS.gene056986 | MS.gene36492 | 0.815447 | 9.20E-52 | -1.69E-46 |
| MS.gene05950 | MS.gene36492 | 0.807985 | 3.87E-50 | -1.69E-46 |
| MS.gene05954 | MS.gene36492 | 0.808065 | 3.72E-50 | -1.69E-46 |
| MS.gene059935 | MS.gene36492 | 0.835712 | 1.43E-56 | -1.69E-46 |
| MS.gene06001 | MS.gene36492 | 0.819153 | 1.35E-52 | -1.69E-46 |
| MS.gene06011 | MS.gene36492 | 0.835808 | 1.35E-56 | -1.69E-46 |
| MS.gene060429 | MS.gene36492 | 0.824402 | 8.23E-54 | -1.69E-46 |
| MS.gene060586 | MS.gene36492 | 0.80205 | 6.74E-49 | -1.69E-46 |
| MS.gene060763 | MS.gene36492 | 0.822406 | 2.41E-53 | -1.69E-46 |
| MS.gene060830 | MS.gene36492 | 0.855994 | 4.34E-62 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36492.t1 | MTR_4g096820 | 87.534 | 746 | 39 | 4 | 1 | 701 | 1 | 737 | 0.0 | 1067 |
| MS.gene36492.t1 | MTR_4g073330 | 50.957 | 679 | 261 | 24 | 45 | 701 | 24 | 652 | 1.74e-180 | 529 |
| MS.gene36492.t1 | MTR_3g107350 | 49.836 | 305 | 90 | 14 | 402 | 697 | 2 | 252 | 6.30e-54 | 186 |
| MS.gene36492.t1 | MTR_3g107330 | 60.377 | 106 | 39 | 2 | 262 | 367 | 55 | 157 | 3.29e-35 | 133 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36492.t1 | AT3G01160 | 51.521 | 559 | 206 | 18 | 151 | 692 | 181 | 691 | 1.91e-140 | 428 |
Find 138 sgRNAs with CRISPR-Local
Find 265 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTTCTTCTTCTTAATATC+AGG | 0.236398 | 4.1:-18292169 | None:intergenic |
| GAAATCAAAGCAAGATAAAT+TGG | 0.239661 | 4.1:+18293012 | MS.gene36492:CDS |
| CTGCTTCTGTGCCAGCTGCC+TGG | 0.262136 | 4.1:-18292867 | None:intergenic |
| TAAATTGGAGTTATCATCTT+TGG | 0.267442 | 4.1:+18293027 | MS.gene36492:CDS |
| AGATATAAGCAAACATATTA+TGG | 0.278395 | 4.1:+18291964 | MS.gene36492:CDS |
| ATAAACTATACCTGAATTTC+AGG | 0.285468 | 4.1:-18289678 | None:intergenic |
| CCACCGATCCACAATTTAAA+AGG | 0.293286 | 4.1:+18292464 | MS.gene36492:CDS |
| AAGCTCTTCTTTGCTTGCTT+TGG | 0.294428 | 4.1:-18292248 | None:intergenic |
| ACTATTTATCCAACCGAGTT+TGG | 0.299625 | 4.1:+18290176 | MS.gene36492:CDS |
| TAGGCTGGCTGTTGTTAATA+TGG | 0.299951 | 4.1:+18289969 | MS.gene36492:CDS |
| ATGAATGAGGAGGAAGTTAA+AGG | 0.319405 | 4.1:+18290209 | MS.gene36492:CDS |
| GAAGACAATTGTGTTTCTTT+CGG | 0.328663 | 4.1:-18292938 | None:intergenic |
| CATCGAATCCACTTGACTTA+AGG | 0.335239 | 4.1:+18291052 | MS.gene36492:CDS |
| TCTTTGTTCTCGTAGTTTGC+AGG | 0.342246 | 4.1:-18291209 | None:intergenic |
| TTTATCAGACTTCTTCGAAT+TGG | 0.349081 | 4.1:-18289175 | None:intergenic |
| CATCGCAATGGGATCCAAAA+AGG | 0.357185 | 4.1:+18289077 | None:intergenic |
| GCAACCTTTGTTTGATGCTT+TGG | 0.358480 | 4.1:-18289279 | None:intergenic |
| TGGCTACCCCATCCATATCT+TGG | 0.367484 | 4.1:-18292228 | None:intergenic |
| AAGGAGAAGGGTGGGGAAGA+AGG | 0.368948 | 4.1:+18292977 | MS.gene36492:CDS |
| GCGAAACCGGAGATTGATAA+TGG | 0.375886 | 4.1:+18289531 | MS.gene36492:CDS |
| AGATCATAAGCTCCAAGATA+TGG | 0.384646 | 4.1:+18292216 | MS.gene36492:CDS |
| GGATCATCAAATGCATTGTT+TGG | 0.388107 | 4.1:-18292400 | None:intergenic |
| AGATGATGATGCCATGGATA+TGG | 0.388730 | 4.1:+18291916 | MS.gene36492:CDS |
| ACAGTAAAGTTGAACTTACT+TGG | 0.391491 | 4.1:+18291255 | MS.gene36492:CDS |
| AGAGGATGAACCTGAAATTC+AGG | 0.394746 | 4.1:+18289668 | MS.gene36492:CDS |
| AAGGTTTATTCCAGACGATA+TGG | 0.401282 | 4.1:+18291071 | MS.gene36492:CDS |
| ATCTTGCAAACCTGTATTGA+AGG | 0.406255 | 4.1:-18291945 | None:intergenic |
| CGCCGTGTATGCCAGGCAGC+TGG | 0.411298 | 4.1:+18292856 | MS.gene36492:CDS |
| AGGAGAAGGGTGGGGAAGAA+GGG | 0.411300 | 4.1:+18292978 | MS.gene36492:CDS |
| TCACCATCAAATAGAGCAAC+AGG | 0.414563 | 4.1:-18290233 | None:intergenic |
| CCTCCTCATTCATACGTTGA+AGG | 0.416581 | 4.1:-18290199 | None:intergenic |
| GGGCCTGTTGCTCTATTTGA+TGG | 0.419143 | 4.1:+18290230 | MS.gene36492:CDS |
| CAATTGTCTTCTGATGGTTC+TGG | 0.419907 | 4.1:+18292950 | MS.gene36492:CDS |
| TATTGACATCAGAGGATAGC+TGG | 0.422896 | 4.1:-18293081 | None:intergenic |
| AGTTCATTAGCCCCACCTAA+TGG | 0.423520 | 4.1:+18290137 | MS.gene36492:CDS |
| ACCGATTTGACCAGTCCATT+AGG | 0.435915 | 4.1:-18290152 | None:intergenic |
| ACTTTGTCATTACTGTGTAA+TGG | 0.439145 | 4.1:-18289198 | None:intergenic |
| GTCTGAAGAGAGCGGTGATT+CGG | 0.446713 | 4.1:+18289560 | MS.gene36492:CDS |
| CAAACATATTATGGAAAAGA+AGG | 0.449002 | 4.1:+18291973 | MS.gene36492:CDS |
| ACCTCTGATGCAACATCCTT+AGG | 0.449293 | 4.1:-18291108 | None:intergenic |
| GCAGGAGCGCCGTGTATGCC+AGG | 0.451654 | 4.1:+18292849 | MS.gene36492:intron |
| GAAAATCACAATTTAAGAAA+AGG | 0.454669 | 4.1:+18293116 | MS.gene36492:CDS |
| GAAAGTTAAGAATGCGAAAC+CGG | 0.457632 | 4.1:+18289518 | MS.gene36492:CDS |
| ACCTAATGGACTGGTCAAAT+CGG | 0.462020 | 4.1:+18290151 | MS.gene36492:CDS |
| GATGACAAGGGGACAGGTAC+TGG | 0.470311 | 4.1:+18292286 | MS.gene36492:CDS |
| AGAACCACGACGACAACAAA+GGG | 0.472013 | 4.1:+18289109 | MS.gene36492:CDS |
| TCAGTTCCATTATCAATCTC+CGG | 0.476957 | 4.1:-18289537 | None:intergenic |
| GTGAAGAATTATCAGTAGAA+AGG | 0.480256 | 4.1:+18292900 | MS.gene36492:CDS |
| GAACAAAGATTTCTATTCTC+GGG | 0.481122 | 4.1:+18291223 | MS.gene36492:CDS |
| AGAACAAAGATTTCTATTCT+CGG | 0.483286 | 4.1:+18291222 | MS.gene36492:CDS |
| ACCTTTGTTTGATGCTTTGG+TGG | 0.487769 | 4.1:-18289276 | None:intergenic |
| CTGGTATGAAGGAGAAGGGT+GGG | 0.492784 | 4.1:+18292969 | MS.gene36492:CDS |
| TTCTGATGGTTCTGGTATGA+AGG | 0.495916 | 4.1:+18292958 | MS.gene36492:CDS |
| ATGGAGGTGACCTTCAATAC+AGG | 0.496342 | 4.1:+18291935 | MS.gene36492:CDS |
| GCTGGCACAGAAGCAGCAGA+AGG | 0.499989 | 4.1:+18292874 | MS.gene36492:CDS |
| GGGTTTACCTCGCTTATCGA+CGG | 0.500012 | 4.1:-18289361 | None:intergenic |
| TGCCAGCTGCCTGGCATACA+CGG | 0.501362 | 4.1:-18292858 | None:intergenic |
| ATAGCTGGCTCAGTTGGAAA+TGG | 0.501819 | 4.1:+18291766 | MS.gene36492:intron |
| ATTGTGATAGCTGGCTCAGT+TGG | 0.502360 | 4.1:+18291760 | MS.gene36492:intron |
| GATGTCAATACAAAGAAAGC+TGG | 0.502558 | 4.1:+18293094 | MS.gene36492:CDS |
| TGTTTGAATTCCATATCGTC+TGG | 0.504264 | 4.1:-18291081 | None:intergenic |
| GAAACACAATTGTCTTCTGA+TGG | 0.505036 | 4.1:+18292944 | MS.gene36492:CDS |
| TGAAGAATTATCAGTAGAAA+GGG | 0.505273 | 4.1:+18292901 | MS.gene36492:CDS |
| TGAATGAGGAGGAAGTTAAA+GGG | 0.505616 | 4.1:+18290210 | MS.gene36492:CDS |
| GGGGACAGGTACTGGTCTCA+AGG | 0.508304 | 4.1:+18292294 | MS.gene36492:CDS |
| TGATTCGGAGGCTGATGCTA+TGG | 0.508685 | 4.1:+18289575 | MS.gene36492:CDS |
| GCGGAAATTCACTGACGAGC+AGG | 0.510238 | 4.1:+18291313 | MS.gene36492:CDS |
| GGTTTACCTCGCTTATCGAC+GGG | 0.511757 | 4.1:-18289360 | None:intergenic |
| GACAATAATTCAGATGAAGA+TGG | 0.518699 | 4.1:+18291893 | MS.gene36492:CDS |
| AAGTGATGAAGACGATAGTG+AGG | 0.522461 | 4.1:+18290265 | MS.gene36492:CDS |
| TTATCGACGGGTGCAGAAGA+AGG | 0.525290 | 4.1:-18289348 | None:intergenic |
| ATCTGAATTATTGTCAAGCA+AGG | 0.527250 | 4.1:-18291885 | None:intergenic |
| TGCGTGCATATGAAAAGAGC+AGG | 0.528143 | 4.1:+18290342 | MS.gene36492:CDS |
| GGAATAAACCTTAAGTCAAG+TGG | 0.531217 | 4.1:-18291060 | None:intergenic |
| CACATTTACAAAGAAAATGA+TGG | 0.532366 | 4.1:+18291012 | MS.gene36492:CDS |
| AGATTGAGAAAGAAACTCAT+AGG | 0.533078 | 4.1:+18289950 | MS.gene36492:CDS |
| CGAAGATCCTCGATTTGCCA+TGG | 0.535647 | 4.1:+18289227 | MS.gene36492:CDS |
| TTTGTAAATGTGATCTGCTG+TGG | 0.536863 | 4.1:-18291001 | None:intergenic |
| TCCTAAGGATGTTGCATCAG+AGG | 0.537358 | 4.1:+18291107 | MS.gene36492:CDS |
| AGTTGAACTTACTTGGGATG+AGG | 0.538968 | 4.1:+18291262 | MS.gene36492:CDS |
| CTTGCTGATGACAAGGGGAC+AGG | 0.541409 | 4.1:+18292280 | MS.gene36492:CDS |
| CGTTGAAGGCCAAACTCGGT+TGG | 0.544452 | 4.1:-18290185 | None:intergenic |
| TTCGAGCAAATACTTTGAAG+CGG | 0.548379 | 4.1:+18291294 | MS.gene36492:CDS |
| ATAAGCTCCAAGATATGGAT+GGG | 0.550287 | 4.1:+18292221 | MS.gene36492:CDS |
| GGAATTCAAACAGCCTCCTA+AGG | 0.550469 | 4.1:+18291092 | MS.gene36492:CDS |
| CATAAGCTCCAAGATATGGA+TGG | 0.551085 | 4.1:+18292220 | MS.gene36492:CDS |
| TTCAAAGTATTTGCTCGAAG+AGG | 0.553042 | 4.1:-18291290 | None:intergenic |
| TGGCCTTCAACGTATGAATG+AGG | 0.554948 | 4.1:+18290196 | MS.gene36492:CDS |
| AAGAACCACGACGACAACAA+AGG | 0.555045 | 4.1:+18289108 | MS.gene36492:CDS |
| GAAGAACAATGTCAAGCGTA+AGG | 0.557405 | 4.1:+18289143 | MS.gene36492:CDS |
| TGGTATGAAGGAGAAGGGTG+GGG | 0.563117 | 4.1:+18292970 | MS.gene36492:CDS |
| CAGTAAAGTTGAACTTACTT+GGG | 0.565191 | 4.1:+18291256 | MS.gene36492:CDS |
| ATTTGACCAGTCCATTAGGT+GGG | 0.566867 | 4.1:-18290148 | None:intergenic |
| CTGGCACAGAAGCAGCAGAA+GGG | 0.567081 | 4.1:+18292875 | MS.gene36492:CDS |
| TGGCTGTTGTTAATATGGAC+TGG | 0.567725 | 4.1:+18289974 | MS.gene36492:CDS |
| TGAGAAAGAAACTCATAGGC+TGG | 0.567983 | 4.1:+18289954 | MS.gene36492:CDS |
| GGGACAGGTACTGGTCTCAA+GGG | 0.570096 | 4.1:+18292295 | MS.gene36492:CDS |
| TCTTCCCTTTGTTGTCGTCG+TGG | 0.570184 | 4.1:-18289113 | None:intergenic |
| CATACGTTGAAGGCCAAACT+CGG | 0.576188 | 4.1:-18290189 | None:intergenic |
| ATTTAAGAAAAGGAAGCACT+AGG | 0.576581 | 4.1:+18293126 | MS.gene36492:CDS |
| ATCATGAAAATCTTCTTCAT+CGG | 0.577014 | 4.1:-18290297 | None:intergenic |
| GGTTCTGGTATGAAGGAGAA+GGG | 0.577877 | 4.1:+18292965 | MS.gene36492:CDS |
| ATTAGCCCCACCTAATGGAC+TGG | 0.582985 | 4.1:+18290142 | MS.gene36492:CDS |
| TTTCTTTGTATTGACATCAG+AGG | 0.587167 | 4.1:-18293089 | None:intergenic |
| TAAAGAAATAGATATTGATA+CGG | 0.588626 | 4.1:+18289611 | MS.gene36492:CDS |
| TCTGGTATGAAGGAGAAGGG+TGG | 0.592849 | 4.1:+18292968 | MS.gene36492:CDS |
| ATTACACAGTAATGACAAAG+TGG | 0.593008 | 4.1:+18289200 | MS.gene36492:CDS |
| ACTGTTGCTTGCTGATGACA+AGG | 0.595700 | 4.1:+18292273 | MS.gene36492:CDS |
| GAAGGTCACCTCCATATCCA+TGG | 0.597313 | 4.1:-18291927 | None:intergenic |
| GATTTGACCAGTCCATTAGG+TGG | 0.602078 | 4.1:-18290149 | None:intergenic |
| TGAAGAGAGCGGTGATTCGG+AGG | 0.603835 | 4.1:+18289563 | MS.gene36492:CDS |
| TTTGACCAGTCCATTAGGTG+GGG | 0.605201 | 4.1:-18290147 | None:intergenic |
| TCTGATGCAACATCCTTAGG+AGG | 0.610046 | 4.1:-18291105 | None:intergenic |
| CATATGAAAAGAGCAGGATG+AGG | 0.614560 | 4.1:+18290348 | MS.gene36492:CDS |
| AGATGACTTCTTCATTGATG+AGG | 0.615496 | 4.1:+18292144 | MS.gene36492:CDS |
| AACTCTTGTGAGTGAACATG+CGG | 0.617686 | 4.1:-18289320 | None:intergenic |
| AAATAATACATACAAGTCCA+CGG | 0.619519 | 4.1:-18290114 | None:intergenic |
| TGGTTCTGGTATGAAGGAGA+AGG | 0.619698 | 4.1:+18292964 | MS.gene36492:CDS |
| ATTGATACGGATACTGATGA+TGG | 0.633028 | 4.1:+18289624 | MS.gene36492:CDS |
| AGATGGAGATGATGATGCCA+TGG | 0.633714 | 4.1:+18291910 | MS.gene36492:CDS |
| TGATGAGAACGATTCTGAAG+AGG | 0.644883 | 4.1:+18289650 | MS.gene36492:CDS |
| TGTTGCTTGCTGATGACAAG+GGG | 0.651064 | 4.1:+18292275 | MS.gene36492:CDS |
| GTGTGAACCATGGCAAATCG+AGG | 0.655246 | 4.1:-18289234 | None:intergenic |
| CAGTTTGGGAAGAATATCTG+AGG | 0.657281 | 4.1:+18292011 | MS.gene36492:CDS |
| TAAGCTCCAAGATATGGATG+GGG | 0.662936 | 4.1:+18292222 | MS.gene36492:CDS |
| GAGTGATAGTGATGATAGTG+AGG | 0.664566 | 4.1:+18291811 | MS.gene36492:CDS |
| CCTTCAACGTATGAATGAGG+AGG | 0.665822 | 4.1:+18290199 | MS.gene36492:CDS |
| ACGTGGATCAGTGTGAACCA+TGG | 0.669461 | 4.1:-18289244 | None:intergenic |
| TCTGCACCCGTCGATAAGCG+AGG | 0.680086 | 4.1:+18289354 | MS.gene36492:CDS |
| TTTGGTGGTTCACGAAAACG+TGG | 0.682242 | 4.1:-18289261 | None:intergenic |
| CTGTTGCTTGCTGATGACAA+GGG | 0.682674 | 4.1:+18292274 | MS.gene36492:CDS |
| TGATGATGCCATGGATATGG+AGG | 0.684743 | 4.1:+18291919 | MS.gene36492:CDS |
| TATGGACTGGCGGTATGTGA+AGG | 0.687556 | 4.1:+18289987 | MS.gene36492:CDS |
| GGAACTGAGTCTGAAGAGAG+CGG | 0.689169 | 4.1:+18289552 | MS.gene36492:CDS |
| ACCACCAAAGCATCAAACAA+AGG | 0.695193 | 4.1:+18289275 | MS.gene36492:CDS |
| CTGTTGTTAATATGGACTGG+CGG | 0.700073 | 4.1:+18289977 | MS.gene36492:CDS |
| GAGAAGATAGATGCAAAACG+TGG | 0.707824 | 4.1:-18292421 | None:intergenic |
| ATAACAATGAGACTGATGAG+CGG | 0.723456 | 4.1:+18291834 | MS.gene36492:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTCTTATTATTAGTAATATT+AGG | + | chr4.1:18289769-18289788 | MS.gene36492:intron | 10.0% |
| !!! | AAATATTGAAAATTATTTCT+TGG | + | chr4.1:18292606-18292625 | MS.gene36492:intron | 10.0% |
| !!! | ACAAAAATTAAATTTTAGAA+AGG | - | chr4.1:18292824-18292843 | None:intergenic | 10.0% |
| !!! | GTAAAATAATTTTAATTGAT+CGG | + | chr4.1:18289816-18289835 | MS.gene36492:intron | 10.0% |
| !! | AAATGACTAAATAAAAAATG+AGG | - | chr4.1:18291435-18291454 | None:intergenic | 15.0% |
| !! | TAAAGAAATAGATATTGATA+CGG | + | chr4.1:18289611-18289630 | MS.gene36492:CDS | 15.0% |
| !! | TAATAATACTTAGAGTTTAA+CGG | - | chr4.1:18289905-18289924 | None:intergenic | 15.0% |
| !! | TTAGTAATATTAGGATTTAA+AGG | + | chr4.1:18289778-18289797 | MS.gene36492:intron | 15.0% |
| !! | TTATAAATGTGAATACTATT+TGG | - | chr4.1:18291458-18291477 | None:intergenic | 15.0% |
| !!! | ATAAAATACCTTTTAAATTG+TGG | - | chr4.1:18292475-18292494 | None:intergenic | 15.0% |
| !!! | TAAGTGACATAATTTTAAAA+TGG | - | chr4.1:18289744-18289763 | None:intergenic | 15.0% |
| !!! | TACTTATTATCTTTTTTTCT+AGG | - | chr4.1:18291860-18291879 | None:intergenic | 15.0% |
| !!! | TATAATCTGAAGTTTAAAAA+AGG | + | chr4.1:18292319-18292338 | MS.gene36492:CDS | 15.0% |
| !!! | TATAGTTTATGCATTTTATT+TGG | + | chr4.1:18289691-18289710 | MS.gene36492:intron | 15.0% |
| !! | AAAAAAAAACTTAAAGCTCT+GGG | - | chr4.1:18291728-18291747 | None:intergenic | 20.0% |
| !! | AATAATACTTAGAGTTTAAC+GGG | - | chr4.1:18289904-18289923 | None:intergenic | 20.0% |
| !! | AGATATAAGCAAACATATTA+TGG | + | chr4.1:18291964-18291983 | MS.gene36492:CDS | 20.0% |
| !! | ATAAAAAATCAAGAACAGTT+TGG | + | chr4.1:18291996-18292015 | MS.gene36492:CDS | 20.0% |
| !! | ATATACAAGTTCTTGAATAA+CGG | - | chr4.1:18292769-18292788 | None:intergenic | 20.0% |
| !! | CTCTAAGTATTATTATGATA+TGG | + | chr4.1:18289910-18289929 | MS.gene36492:intron | 20.0% |
| !! | GAAAATCACAATTTAAGAAA+AGG | + | chr4.1:18293116-18293135 | MS.gene36492:CDS | 20.0% |
| !! | TAAAAAATCAAGAACAGTTT+GGG | + | chr4.1:18291997-18292016 | MS.gene36492:CDS | 20.0% |
| !! | TGATATAATGAATGGTTAAA+GGG | - | chr4.1:18290526-18290545 | None:intergenic | 20.0% |
| !! | TTAAACCTTGATATAATGAA+TGG | - | chr4.1:18290534-18290553 | None:intergenic | 20.0% |
| !! | TTGATATAATGAATGGTTAA+AGG | - | chr4.1:18290527-18290546 | None:intergenic | 20.0% |
| !! | TTTAACCATTCATTATATCA+AGG | + | chr4.1:18290526-18290545 | MS.gene36492:intron | 20.0% |
| !!! | AATAATTTTAATTGATCGGT+TGG | + | chr4.1:18289820-18289839 | MS.gene36492:intron | 20.0% |
| !!! | ATTTAATTTTTGTTGATTGC+AGG | + | chr4.1:18292831-18292850 | MS.gene36492:intron | 20.0% |
| !!! | GATTTAGCTAAGAAATTTTT+TGG | - | chr4.1:18292656-18292675 | None:intergenic | 20.0% |
| !!! | GTGTTGATAAATTTATATCT+TGG | + | chr4.1:18291366-18291385 | MS.gene36492:intron | 20.0% |
| ! | AAATAATACATACAAGTCCA+CGG | - | chr4.1:18290117-18290136 | None:intergenic | 25.0% |
| ! | ACATCTGTACTAGTTATTAA+GGG | - | chr4.1:18291576-18291595 | None:intergenic | 25.0% |
| ! | AGAACAAAGATTTCTATTCT+CGG | + | chr4.1:18291222-18291241 | MS.gene36492:CDS | 25.0% |
| ! | AGAGTTTACTACATGAAAAT+AGG | - | chr4.1:18292793-18292812 | None:intergenic | 25.0% |
| ! | AGTATTATTATGATATGGAC+AGG | + | chr4.1:18289915-18289934 | MS.gene36492:intron | 25.0% |
| ! | ATAAACTATACCTGAATTTC+AGG | - | chr4.1:18289681-18289700 | None:intergenic | 25.0% |
| ! | ATCATGAAAATCTTCTTCAT+CGG | - | chr4.1:18290300-18290319 | None:intergenic | 25.0% |
| ! | CAAACATATTATGGAAAAGA+AGG | + | chr4.1:18291973-18291992 | MS.gene36492:CDS | 25.0% |
| ! | CAATTAACAAAAACAAGTAC+AGG | - | chr4.1:18291601-18291620 | None:intergenic | 25.0% |
| ! | CACATTTACAAAGAAAATGA+TGG | + | chr4.1:18291012-18291031 | MS.gene36492:CDS | 25.0% |
| ! | CATTACATAAAGAATATCAG+TGG | - | chr4.1:18291656-18291675 | None:intergenic | 25.0% |
| ! | GAAAAAAAAACTTAAAGCTC+TGG | - | chr4.1:18291729-18291748 | None:intergenic | 25.0% |
| ! | GAAATCAAAGCAAGATAAAT+TGG | + | chr4.1:18293012-18293031 | MS.gene36492:CDS | 25.0% |
| ! | GAGTTAGACAAGATAATATT+GGG | - | chr4.1:18292684-18292703 | None:intergenic | 25.0% |
| ! | TAAATTGGAGTTATCATCTT+TGG | + | chr4.1:18293027-18293046 | MS.gene36492:CDS | 25.0% |
| ! | TACATCTGTACTAGTTATTA+AGG | - | chr4.1:18291577-18291596 | None:intergenic | 25.0% |
| ! | TATACAAGTTCTTGAATAAC+GGG | - | chr4.1:18292768-18292787 | None:intergenic | 25.0% |
| ! | TCTTCGTCATTACTATAAAA+TGG | + | chr4.1:18289413-18289432 | MS.gene36492:intron | 25.0% |
| ! | TGAAGAATTATCAGTAGAAA+GGG | + | chr4.1:18292901-18292920 | MS.gene36492:CDS | 25.0% |
| ! | TGAGTTAGACAAGATAATAT+TGG | - | chr4.1:18292685-18292704 | None:intergenic | 25.0% |
| ! | TTAATTGTTATGTATCTGTG+TGG | + | chr4.1:18291614-18291633 | MS.gene36492:intron | 25.0% |
| ! | TTCTTCTTCTTCTTAATATC+AGG | - | chr4.1:18292172-18292191 | None:intergenic | 25.0% |
| ! | TTGTGATATATTTGCTTGAA+TGG | + | chr4.1:18290396-18290415 | MS.gene36492:intron | 25.0% |
| ! | TTTATATATATGCTGTATCG+TGG | + | chr4.1:18291139-18291158 | MS.gene36492:intron | 25.0% |
| !! | AAAATTATTTCTTGGCATGA+TGG | + | chr4.1:18292614-18292633 | MS.gene36492:intron | 25.0% |
| !! | AGATTCAAGTTAGAAAAACA+TGG | - | chr4.1:18290930-18290949 | None:intergenic | 25.0% |
| !! | ATACCTTTTAAATTGTGGAT+CGG | - | chr4.1:18292470-18292489 | None:intergenic | 25.0% |
| !! | ATCAGCGTGTAAAATATTTT+CGG | - | chr4.1:18290575-18290594 | None:intergenic | 25.0% |
| !! | ATCGTGGATTATAATAGAAT+AGG | + | chr4.1:18291155-18291174 | MS.gene36492:intron | 25.0% |
| !! | TTTTTACACTGACATCTAAT+AGG | - | chr4.1:18289865-18289884 | None:intergenic | 25.0% |
| !!! | ATTTGTTATGTTGCTAAGAT+TGG | + | chr4.1:18292713-18292732 | MS.gene36492:intron | 25.0% |
| !!! | TCTTTGTCATTTTTACTTTC+TGG | - | chr4.1:18292199-18292218 | None:intergenic | 25.0% |
| !!! | TTGTGTTTTGTTGTGTTTTT+TGG | + | chr4.1:18290084-18290103 | MS.gene36492:intron | 25.0% |
| AATATGAGTGACATGTGATA+CGG | - | chr4.1:18290852-18290871 | None:intergenic | 30.0% | |
| ACAGTAAAGTTGAACTTACT+TGG | + | chr4.1:18291255-18291274 | MS.gene36492:CDS | 30.0% | |
| ACTTTGTCATTACTGTGTAA+TGG | - | chr4.1:18289201-18289220 | None:intergenic | 30.0% | |
| AGATTGAGAAAGAAACTCAT+AGG | + | chr4.1:18289950-18289969 | MS.gene36492:CDS | 30.0% | |
| ATCTGAATTATTGTCAAGCA+AGG | - | chr4.1:18291888-18291907 | None:intergenic | 30.0% | |
| ATTACACAGTAATGACAAAG+TGG | + | chr4.1:18289200-18289219 | MS.gene36492:CDS | 30.0% | |
| ATTCTAGATCATAAGAAAGG+AGG | - | chr4.1:18290725-18290744 | None:intergenic | 30.0% | |
| CAGTAAAGTTGAACTTACTT+GGG | + | chr4.1:18291256-18291275 | MS.gene36492:CDS | 30.0% | |
| CTGAAGTTTAAAAAAGGCAA+GGG | + | chr4.1:18292325-18292344 | MS.gene36492:CDS | 30.0% | |
| GAACAAAGATTTCTATTCTC+GGG | + | chr4.1:18291223-18291242 | MS.gene36492:CDS | 30.0% | |
| GAAGACAATTGTGTTTCTTT+CGG | - | chr4.1:18292941-18292960 | None:intergenic | 30.0% | |
| GACAATAATTCAGATGAAGA+TGG | + | chr4.1:18291893-18291912 | MS.gene36492:CDS | 30.0% | |
| GTGAAGAATTATCAGTAGAA+AGG | + | chr4.1:18292900-18292919 | MS.gene36492:CDS | 30.0% | |
| GTTATTAAGGGACAAAAGAA+TGG | - | chr4.1:18291564-18291583 | None:intergenic | 30.0% | |
| TATCTTGGAAAAATCTTGTG+TGG | + | chr4.1:18291381-18291400 | MS.gene36492:intron | 30.0% | |
| TCAAGCAAATATATCACAAC+AGG | - | chr4.1:18290395-18290414 | None:intergenic | 30.0% | |
| TCATTACTATAAAATGGACG+AGG | + | chr4.1:18289419-18289438 | MS.gene36492:intron | 30.0% | |
| TTATGTTGCTAAGATTGGAA+TGG | + | chr4.1:18292718-18292737 | MS.gene36492:intron | 30.0% | |
| TTTATCAGACTTCTTCGAAT+TGG | - | chr4.1:18289178-18289197 | None:intergenic | 30.0% | |
| TTTATGGAGATTATACTTCC+CGG | + | chr4.1:18290788-18290807 | MS.gene36492:intron | 30.0% | |
| ! | AAACACAATTGACTCACATT+AGG | - | chr4.1:18290026-18290045 | None:intergenic | 30.0% |
| ! | ATAACGGGAAGTACAATTAT+AGG | - | chr4.1:18292753-18292772 | None:intergenic | 30.0% |
| ! | GGATAATGATGATGAATTAG+AGG | + | chr4.1:18289488-18289507 | MS.gene36492:intron | 30.0% |
| ! | TAACGGGAAGTACAATTATA+GGG | - | chr4.1:18292752-18292771 | None:intergenic | 30.0% |
| ! | TATCAAATTTTATGCTGCGA+TGG | + | chr4.1:18291481-18291500 | MS.gene36492:intron | 30.0% |
| ! | TCTGAAGTTTAAAAAAGGCA+AGG | + | chr4.1:18292324-18292343 | MS.gene36492:CDS | 30.0% |
| ! | TGGAGTTCAAAGATTTTGTT+TGG | + | chr4.1:18290049-18290068 | MS.gene36492:intron | 30.0% |
| ! | TTCAAGTTAGAAAAACATGG+TGG | - | chr4.1:18290927-18290946 | None:intergenic | 30.0% |
| ! | TTTCTTTGTATTGACATCAG+AGG | - | chr4.1:18293092-18293111 | None:intergenic | 30.0% |
| ! | TTTTCAACTTGAATCAAGCA+TGG | + | chr4.1:18290451-18290470 | MS.gene36492:intron | 30.0% |
| !! | ATTTAAGAAAAGGAAGCACT+AGG | + | chr4.1:18293126-18293145 | MS.gene36492:CDS | 30.0% |
| !!! | ATGCTTTGATTTGTTTTTCC+TGG | - | chr4.1:18292059-18292078 | None:intergenic | 30.0% |
| !!! | GTTCTTCTTGTTTTCCTTTT+TGG | - | chr4.1:18289094-18289113 | None:intergenic | 30.0% |
| !!! | TGTCATTACGCTTTGTTTTA+TGG | + | chr4.1:18290772-18290791 | MS.gene36492:intron | 30.0% |
| !!! | TTGTTGTGTTTTTTGGTTGT+AGG | + | chr4.1:18290091-18290110 | MS.gene36492:intron | 30.0% |
| AAAAAAGGCAAGGGCAAAAA+AGG | + | chr4.1:18292334-18292353 | MS.gene36492:CDS | 35.0% | |
| AAAATGAGGTAACTACTCAG+AGG | - | chr4.1:18291421-18291440 | None:intergenic | 35.0% | |
| AAGGTTTATTCCAGACGATA+TGG | + | chr4.1:18291071-18291090 | MS.gene36492:CDS | 35.0% | |
| ACTACTATTTCACTCTGATG+GGG | + | chr4.1:18292562-18292581 | MS.gene36492:intron | 35.0% | |
| ACTATTTATCCAACCGAGTT+TGG | + | chr4.1:18290176-18290195 | MS.gene36492:CDS | 35.0% | |
| AGATCATAAGCTCCAAGATA+TGG | + | chr4.1:18292216-18292235 | MS.gene36492:CDS | 35.0% | |
| AGATGACTTCTTCATTGATG+AGG | + | chr4.1:18292144-18292163 | MS.gene36492:CDS | 35.0% | |
| ATAACAATGAGACTGATGAG+CGG | + | chr4.1:18291834-18291853 | MS.gene36492:CDS | 35.0% | |
| ATAAGCTCCAAGATATGGAT+GGG | + | chr4.1:18292221-18292240 | MS.gene36492:CDS | 35.0% | |
| ATATGAGTGACATGTGATAC+GGG | - | chr4.1:18290851-18290870 | None:intergenic | 35.0% | |
| ATCTGTGTGGTAGAAGAAAT+TGG | + | chr4.1:18291627-18291646 | MS.gene36492:intron | 35.0% | |
| ATCTTGCAAACCTGTATTGA+AGG | - | chr4.1:18291948-18291967 | None:intergenic | 35.0% | |
| ATGAATGAGGAGGAAGTTAA+AGG | + | chr4.1:18290209-18290228 | MS.gene36492:CDS | 35.0% | |
| ATTATGATATGGACAGGAAG+AGG | + | chr4.1:18289921-18289940 | MS.gene36492:intron | 35.0% | |
| ATTGATACGGATACTGATGA+TGG | + | chr4.1:18289624-18289643 | MS.gene36492:CDS | 35.0% | |
| CACTACTATTTCACTCTGAT+GGG | + | chr4.1:18292561-18292580 | MS.gene36492:intron | 35.0% | |
| CGCATTCTAGATCATAAGAA+AGG | - | chr4.1:18290728-18290747 | None:intergenic | 35.0% | |
| GAAACACAATTGTCTTCTGA+TGG | + | chr4.1:18292944-18292963 | MS.gene36492:CDS | 35.0% | |
| GAAAGGAGGATAACAAAGAT+AGG | - | chr4.1:18290711-18290730 | None:intergenic | 35.0% | |
| GAAAGTTAAGAATGCGAAAC+CGG | + | chr4.1:18289518-18289537 | MS.gene36492:CDS | 35.0% | |
| GAATCTTTATCTTGCTCTCT+AGG | + | chr4.1:18290944-18290963 | MS.gene36492:intron | 35.0% | |
| GACAATATCAGCGTGTAAAA+TGG | - | chr4.1:18290581-18290600 | None:intergenic | 35.0% | |
| GATGTCAATACAAAGAAAGC+TGG | + | chr4.1:18293094-18293113 | MS.gene36492:CDS | 35.0% | |
| GCACGTCAAAATAGTAAACA+TGG | - | chr4.1:18290884-18290903 | None:intergenic | 35.0% | |
| GGAATAAACCTTAAGTCAAG+TGG | - | chr4.1:18291063-18291082 | None:intergenic | 35.0% | |
| GGATCATCAAATGCATTGTT+TGG | - | chr4.1:18292403-18292422 | None:intergenic | 35.0% | |
| GTGAGTCAATTGTGTTTATC+TGG | + | chr4.1:18290029-18290048 | MS.gene36492:intron | 35.0% | |
| TAGAAAAACATGGTGGTAAG+AGG | - | chr4.1:18290920-18290939 | None:intergenic | 35.0% | |
| TCACTACTATTTCACTCTGA+TGG | + | chr4.1:18292560-18292579 | MS.gene36492:intron | 35.0% | |
| TCAGTTCCATTATCAATCTC+CGG | - | chr4.1:18289540-18289559 | None:intergenic | 35.0% | |
| TCTGTGTGGTAGAAGAAATT+GGG | + | chr4.1:18291628-18291647 | MS.gene36492:intron | 35.0% | |
| TGAATGAGGAGGAAGTTAAA+GGG | + | chr4.1:18290210-18290229 | MS.gene36492:CDS | 35.0% | |
| TGTTTGAATTCCATATCGTC+TGG | - | chr4.1:18291084-18291103 | None:intergenic | 35.0% | |
| TTCCTTTCTATTGTGATAGC+TGG | + | chr4.1:18291751-18291770 | MS.gene36492:intron | 35.0% | |
| TTTGTAAATGTGATCTGCTG+TGG | - | chr4.1:18291004-18291023 | None:intergenic | 35.0% | |
| ! | CTCTAGGTACTATTTTGCTT+TGG | + | chr4.1:18290960-18290979 | MS.gene36492:intron | 35.0% |
| ! | CTTTTAAATTGTGGATCGGT+GGG | - | chr4.1:18292466-18292485 | None:intergenic | 35.0% |
| ! | TAGGTACTATTTTGCTTTGG+TGG | + | chr4.1:18290963-18290982 | MS.gene36492:intron | 35.0% |
| ! | TTCAAAGTATTTGCTCGAAG+AGG | - | chr4.1:18291293-18291312 | None:intergenic | 35.0% |
| ! | TTCGAGCAAATACTTTGAAG+CGG | + | chr4.1:18291294-18291313 | MS.gene36492:CDS | 35.0% |
| !! | ATCTTGTGTGGTGTTAGTTT+TGG | + | chr4.1:18291393-18291412 | MS.gene36492:intron | 35.0% |
| !! | TGCGAATTAGCCTTATCTTT+GGG | - | chr4.1:18289384-18289403 | None:intergenic | 35.0% |
| AACATGGTGGTAAGAGGAAA+AGG | - | chr4.1:18290914-18290933 | None:intergenic | 40.0% | |
| AACGTGAGAAAAAGAAAGCC+AGG | + | chr4.1:18292038-18292057 | MS.gene36492:CDS | 40.0% | |
| AACTCTTGTGAGTGAACATG+CGG | - | chr4.1:18289323-18289342 | None:intergenic | 40.0% | |
| AAGCTCTTCTTTGCTTGCTT+TGG | - | chr4.1:18292251-18292270 | None:intergenic | 40.0% | |
| AAGTGATGAAGACGATAGTG+AGG | + | chr4.1:18290265-18290284 | MS.gene36492:CDS | 40.0% | |
| ACACGCTGATATTGTCAAGT+GGG | + | chr4.1:18290585-18290604 | MS.gene36492:intron | 40.0% | |
| ACATGGTGGTAAGAGGAAAA+GGG | - | chr4.1:18290913-18290932 | None:intergenic | 40.0% | |
| AGAGGATGAACCTGAAATTC+AGG | + | chr4.1:18289668-18289687 | MS.gene36492:CDS | 40.0% | |
| AGCCAGCTATCACAATAGAA+AGG | - | chr4.1:18291756-18291775 | None:intergenic | 40.0% | |
| AGTAGAACAGAGTAGTGATG+AGG | + | chr4.1:18289464-18289483 | MS.gene36492:intron | 40.0% | |
| AGTTGAACTTACTTGGGATG+AGG | + | chr4.1:18291262-18291281 | MS.gene36492:CDS | 40.0% | |
| ATTATACTTCCCGGAACACA+TGG | + | chr4.1:18290797-18290816 | MS.gene36492:intron | 40.0% | |
| ATTTGACCAGTCCATTAGGT+GGG | - | chr4.1:18290151-18290170 | None:intergenic | 40.0% | |
| CAAAAAAGGCAAGGGCAAAA+AGG | + | chr4.1:18292348-18292367 | MS.gene36492:CDS | 40.0% | |
| CAAAGATAAGGCTAATTCGC+AGG | + | chr4.1:18289383-18289402 | MS.gene36492:intron | 40.0% | |
| CAATTGTCTTCTGATGGTTC+TGG | + | chr4.1:18292950-18292969 | MS.gene36492:CDS | 40.0% | |
| CAGTTTGGGAAGAATATCTG+AGG | + | chr4.1:18292011-18292030 | MS.gene36492:CDS | 40.0% | |
| CATAAGCTCCAAGATATGGA+TGG | + | chr4.1:18292220-18292239 | MS.gene36492:CDS | 40.0% | |
| CATATGAAAAGAGCAGGATG+AGG | + | chr4.1:18290348-18290367 | MS.gene36492:CDS | 40.0% | |
| CATCGAATCCACTTGACTTA+AGG | + | chr4.1:18291052-18291071 | MS.gene36492:CDS | 40.0% | |
| CCACCGATCCACAATTTAAA+AGG | + | chr4.1:18292464-18292483 | MS.gene36492:CDS | 40.0% | |
| CTGTGTGGTAGAAGAAATTG+GGG | + | chr4.1:18291629-18291648 | MS.gene36492:intron | 40.0% | |
| GAAGAACAATGTCAAGCGTA+AGG | + | chr4.1:18289143-18289162 | MS.gene36492:CDS | 40.0% | |
| GAGAAGATAGATGCAAAACG+TGG | - | chr4.1:18292424-18292443 | None:intergenic | 40.0% | |
| GGAGGATAACAAAGATAGGA+AGG | - | chr4.1:18290707-18290726 | None:intergenic | 40.0% | |
| GTATATGTATGTGCATGGCA+TGG | - | chr4.1:18291526-18291545 | None:intergenic | 40.0% | |
| TAAGCTCCAAGATATGGATG+GGG | + | chr4.1:18292222-18292241 | MS.gene36492:CDS | 40.0% | |
| TACACGCTGATATTGTCAAG+TGG | + | chr4.1:18290584-18290603 | MS.gene36492:intron | 40.0% | |
| TCACCATCAAATAGAGCAAC+AGG | - | chr4.1:18290236-18290255 | None:intergenic | 40.0% | |
| TCACTATTTCCCATGTGTTC+CGG | - | chr4.1:18290810-18290829 | None:intergenic | 40.0% | |
| TGAGAAAGAAACTCATAGGC+TGG | + | chr4.1:18289954-18289973 | MS.gene36492:CDS | 40.0% | |
| TGAGCGTATATGTATGTGCA+TGG | - | chr4.1:18291531-18291550 | None:intergenic | 40.0% | |
| TGGCTGTTGTTAATATGGAC+TGG | + | chr4.1:18289974-18289993 | MS.gene36492:CDS | 40.0% | |
| TTATACTTCCCGGAACACAT+GGG | + | chr4.1:18290798-18290817 | MS.gene36492:intron | 40.0% | |
| ! | ACCACCAAAGCATCAAACAA+AGG | + | chr4.1:18289275-18289294 | MS.gene36492:CDS | 40.0% |
| ! | ACCTTTGTTTGATGCTTTGG+TGG | - | chr4.1:18289279-18289298 | None:intergenic | 40.0% |
| ! | AGATGATGATGCCATGGATA+TGG | + | chr4.1:18291916-18291935 | MS.gene36492:CDS | 40.0% |
| ! | CCTTTTAAATTGTGGATCGG+TGG | - | chr4.1:18292467-18292486 | None:intergenic | 40.0% |
| ! | GAGTGATAGTGATGATAGTG+AGG | + | chr4.1:18291811-18291830 | MS.gene36492:CDS | 40.0% |
| ! | GCAACCTTTGTTTGATGCTT+TGG | - | chr4.1:18289282-18289301 | None:intergenic | 40.0% |
| ! | TAGGCTGGCTGTTGTTAATA+TGG | + | chr4.1:18289969-18289988 | MS.gene36492:CDS | 40.0% |
| ! | TCTTTGTTCTCGTAGTTTGC+AGG | - | chr4.1:18291212-18291231 | None:intergenic | 40.0% |
| ! | TGATCTAGAATGCGTCTATG+TGG | + | chr4.1:18290734-18290753 | MS.gene36492:intron | 40.0% |
| ! | TGATGAGAACGATTCTGAAG+AGG | + | chr4.1:18289650-18289669 | MS.gene36492:CDS | 40.0% |
| !! | ACCTAATGGACTGGTCAAAT+CGG | + | chr4.1:18290151-18290170 | MS.gene36492:CDS | 40.0% |
| !! | CTGCGAATTAGCCTTATCTT+TGG | - | chr4.1:18289385-18289404 | None:intergenic | 40.0% |
| !! | CTGTTGTTAATATGGACTGG+CGG | + | chr4.1:18289977-18289996 | MS.gene36492:CDS | 40.0% |
| !! | TTCTGATGGTTCTGGTATGA+AGG | + | chr4.1:18292958-18292977 | MS.gene36492:CDS | 40.0% |
| AAAAGGCAAGGGCAAAAAGG+CGG | + | chr4.1:18292351-18292370 | MS.gene36492:CDS | 45.0% | |
| AAGAACCACGACGACAACAA+AGG | + | chr4.1:18289108-18289127 | MS.gene36492:CDS | 45.0% | |
| ACCTCTGATGCAACATCCTT+AGG | - | chr4.1:18291111-18291130 | None:intergenic | 45.0% | |
| AGAACAGAGTAGTGATGAGG+AGG | + | chr4.1:18289467-18289486 | MS.gene36492:intron | 45.0% | |
| AGAACCACGACGACAACAAA+GGG | + | chr4.1:18289109-18289128 | MS.gene36492:CDS | 45.0% | |
| AGTTCATTAGCCCCACCTAA+TGG | + | chr4.1:18290137-18290156 | MS.gene36492:CDS | 45.0% | |
| ATGGAGGTGACCTTCAATAC+AGG | + | chr4.1:18291935-18291954 | MS.gene36492:CDS | 45.0% | |
| CACTATTTCCCATGTGTTCC+GGG | - | chr4.1:18290809-18290828 | None:intergenic | 45.0% | |
| CACTCTGATGGGGTAAACTT+GGG | + | chr4.1:18292572-18292591 | MS.gene36492:intron | 45.0% | |
| CATACGTTGAAGGCCAAACT+CGG | - | chr4.1:18290192-18290211 | None:intergenic | 45.0% | |
| CCTCCTCATTCATACGTTGA+AGG | - | chr4.1:18290202-18290221 | None:intergenic | 45.0% | |
| CCTTCAACGTATGAATGAGG+AGG | + | chr4.1:18290199-18290218 | MS.gene36492:CDS | 45.0% | |
| GATTTGACCAGTCCATTAGG+TGG | - | chr4.1:18290152-18290171 | None:intergenic | 45.0% | |
| GCATGATGGTTACATTCAGC+TGG | + | chr4.1:18292628-18292647 | MS.gene36492:intron | 45.0% | |
| GCGAAACCGGAGATTGATAA+TGG | + | chr4.1:18289531-18289550 | MS.gene36492:CDS | 45.0% | |
| GCGAGGTAAACCCAAAGATA+AGG | + | chr4.1:18289371-18289390 | MS.gene36492:intron | 45.0% | |
| GGAATTCAAACAGCCTCCTA+AGG | + | chr4.1:18291092-18291111 | MS.gene36492:CDS | 45.0% | |
| GGTAAGAGGAAAAGGGAGAT+GGG | - | chr4.1:18290906-18290925 | None:intergenic | 45.0% | |
| TCACTCTGATGGGGTAAACT+TGG | + | chr4.1:18292571-18292590 | MS.gene36492:intron | 45.0% | |
| TCCTAAGGATGTTGCATCAG+AGG | + | chr4.1:18291107-18291126 | MS.gene36492:CDS | 45.0% | |
| TCTGATGCAACATCCTTAGG+AGG | - | chr4.1:18291108-18291127 | None:intergenic | 45.0% | |
| TGCGTGCATATGAAAAGAGC+AGG | + | chr4.1:18290342-18290361 | MS.gene36492:CDS | 45.0% | |
| TGGCCTTCAACGTATGAATG+AGG | + | chr4.1:18290196-18290215 | MS.gene36492:CDS | 45.0% | |
| TGGTAAGAGGAAAAGGGAGA+TGG | - | chr4.1:18290907-18290926 | None:intergenic | 45.0% | |
| TTTGACCAGTCCATTAGGTG+GGG | - | chr4.1:18290150-18290169 | None:intergenic | 45.0% | |
| ! | ACTGTTGCTTGCTGATGACA+AGG | + | chr4.1:18292273-18292292 | MS.gene36492:CDS | 45.0% |
| ! | AGATGGAGATGATGATGCCA+TGG | + | chr4.1:18291910-18291929 | MS.gene36492:CDS | 45.0% |
| ! | ATAGCTGGCTCAGTTGGAAA+TGG | + | chr4.1:18291766-18291785 | MS.gene36492:intron | 45.0% |
| ! | ATTGTGATAGCTGGCTCAGT+TGG | + | chr4.1:18291760-18291779 | MS.gene36492:intron | 45.0% |
| ! | CGGAGAATGCTTTTGATGAG+GGG | + | chr4.1:18292371-18292390 | MS.gene36492:CDS | 45.0% |
| ! | CTGTTGCTTGCTGATGACAA+GGG | + | chr4.1:18292274-18292293 | MS.gene36492:CDS | 45.0% |
| ! | GCGGAGAATGCTTTTGATGA+GGG | + | chr4.1:18292370-18292389 | MS.gene36492:CDS | 45.0% |
| ! | GGTTCTGGTATGAAGGAGAA+GGG | + | chr4.1:18292965-18292984 | MS.gene36492:CDS | 45.0% |
| ! | TGATGATGCCATGGATATGG+AGG | + | chr4.1:18291919-18291938 | MS.gene36492:CDS | 45.0% |
| ! | TGTTGCTTGCTGATGACAAG+GGG | + | chr4.1:18292275-18292294 | MS.gene36492:CDS | 45.0% |
| ! | TTTGGTGGTTCACGAAAACG+TGG | - | chr4.1:18289264-18289283 | None:intergenic | 45.0% |
| !! | ACCGATTTGACCAGTCCATT+AGG | - | chr4.1:18290155-18290174 | None:intergenic | 45.0% |
| !! | TGGTTCTGGTATGAAGGAGA+AGG | + | chr4.1:18292964-18292983 | MS.gene36492:CDS | 45.0% |
| !!! | TGTTTTTTGGTTGTAGGCCG+TGG | + | chr4.1:18290097-18290116 | MS.gene36492:intron | 45.0% |
| ACGTGGATCAGTGTGAACCA+TGG | - | chr4.1:18289247-18289266 | None:intergenic | 50.0% | |
| AGGCAAGGGCAAAAAAGGCA+AGG | + | chr4.1:18292339-18292358 | MS.gene36492:CDS | 50.0% | |
| CTGGTATGAAGGAGAAGGGT+GGG | + | chr4.1:18292969-18292988 | MS.gene36492:CDS | 50.0% | |
| GAAGGTCACCTCCATATCCA+TGG | - | chr4.1:18291930-18291949 | None:intergenic | 50.0% | |
| GGAACTGAGTCTGAAGAGAG+CGG | + | chr4.1:18289552-18289571 | MS.gene36492:CDS | 50.0% | |
| GGCAAGGGCAAAAAAGGCAA+GGG | + | chr4.1:18292340-18292359 | MS.gene36492:CDS | 50.0% | |
| GGGCCTGTTGCTCTATTTGA+TGG | + | chr4.1:18290230-18290249 | MS.gene36492:CDS | 50.0% | |
| GGGTTTACCTCGCTTATCGA+CGG | - | chr4.1:18289364-18289383 | None:intergenic | 50.0% | |
| GGTTTACCTCGCTTATCGAC+GGG | - | chr4.1:18289363-18289382 | None:intergenic | 50.0% | |
| GTCTGAAGAGAGCGGTGATT+CGG | + | chr4.1:18289560-18289579 | MS.gene36492:CDS | 50.0% | |
| GTGTGAACCATGGCAAATCG+AGG | - | chr4.1:18289237-18289256 | None:intergenic | 50.0% | |
| TCTGGTATGAAGGAGAAGGG+TGG | + | chr4.1:18292968-18292987 | MS.gene36492:CDS | 50.0% | |
| TGGCTACCCCATCCATATCT+TGG | - | chr4.1:18292231-18292250 | None:intergenic | 50.0% | |
| TGGTATGAAGGAGAAGGGTG+GGG | + | chr4.1:18292970-18292989 | MS.gene36492:CDS | 50.0% | |
| TTATCGACGGGTGCAGAAGA+AGG | - | chr4.1:18289351-18289370 | None:intergenic | 50.0% | |
| ! | ATTAGCCCCACCTAATGGAC+TGG | + | chr4.1:18290142-18290161 | MS.gene36492:CDS | 50.0% |
| ! | CGAAGATCCTCGATTTGCCA+TGG | + | chr4.1:18289227-18289246 | MS.gene36492:CDS | 50.0% |
| ! | GGCGGAGAATGCTTTTGATG+AGG | + | chr4.1:18292369-18292388 | MS.gene36492:CDS | 50.0% |
| ! | TCTTCCCTTTGTTGTCGTCG+TGG | - | chr4.1:18289116-18289135 | None:intergenic | 50.0% |
| ! | TGATTCGGAGGCTGATGCTA+TGG | + | chr4.1:18289575-18289594 | MS.gene36492:CDS | 50.0% |
| !! | CGGTTGGTCTCTTAACTCGA+TGG | + | chr4.1:18289836-18289855 | MS.gene36492:intron | 50.0% |
| !! | TATGGACTGGCGGTATGTGA+AGG | + | chr4.1:18289987-18290006 | MS.gene36492:CDS | 50.0% |
| AAGGAGAAGGGTGGGGAAGA+AGG | + | chr4.1:18292977-18292996 | MS.gene36492:CDS | 55.0% | |
| AGGAGAAGGGTGGGGAAGAA+GGG | + | chr4.1:18292978-18292997 | MS.gene36492:CDS | 55.0% | |
| CGTTGAAGGCCAAACTCGGT+TGG | - | chr4.1:18290188-18290207 | None:intergenic | 55.0% | |
| CTGGCACAGAAGCAGCAGAA+GGG | + | chr4.1:18292875-18292894 | MS.gene36492:CDS | 55.0% | |
| CTTGCTGATGACAAGGGGAC+AGG | + | chr4.1:18292280-18292299 | MS.gene36492:CDS | 55.0% | |
| GATGACAAGGGGACAGGTAC+TGG | + | chr4.1:18292286-18292305 | MS.gene36492:CDS | 55.0% | |
| GCGGAAATTCACTGACGAGC+AGG | + | chr4.1:18291313-18291332 | MS.gene36492:CDS | 55.0% | |
| ! | TGAAGAGAGCGGTGATTCGG+AGG | + | chr4.1:18289563-18289582 | MS.gene36492:CDS | 55.0% |
| !! | GGGACAGGTACTGGTCTCAA+GGG | + | chr4.1:18292295-18292314 | MS.gene36492:CDS | 55.0% |
| GCTGGCACAGAAGCAGCAGA+AGG | + | chr4.1:18292874-18292893 | MS.gene36492:CDS | 60.0% | |
| TCTGCACCCGTCGATAAGCG+AGG | + | chr4.1:18289354-18289373 | MS.gene36492:CDS | 60.0% | |
| TGCCAGCTGCCTGGCATACA+CGG | - | chr4.1:18292861-18292880 | None:intergenic | 60.0% | |
| !! | GGGGACAGGTACTGGTCTCA+AGG | + | chr4.1:18292294-18292313 | MS.gene36492:CDS | 60.0% |
| CTGCTTCTGTGCCAGCTGCC+TGG | - | chr4.1:18292870-18292889 | None:intergenic | 65.0% | |
| CGCCGTGTATGCCAGGCAGC+TGG | + | chr4.1:18292856-18292875 | MS.gene36492:CDS | 70.0% | |
| !! | GCAGGAGCGCCGTGTATGCC+AGG | + | chr4.1:18292849-18292868 | MS.gene36492:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 18289084 | 18293147 | 18289084 | ID=MS.gene36492 |
| chr4.1 | mRNA | 18289084 | 18293147 | 18289084 | ID=MS.gene36492.t1;Parent=MS.gene36492 |
| chr4.1 | exon | 18289084 | 18289375 | 18289084 | ID=MS.gene36492.t1.exon1;Parent=MS.gene36492.t1 |
| chr4.1 | CDS | 18289084 | 18289375 | 18289084 | ID=cds.MS.gene36492.t1;Parent=MS.gene36492.t1 |
| chr4.1 | exon | 18289508 | 18289689 | 18289508 | ID=MS.gene36492.t1.exon2;Parent=MS.gene36492.t1 |
| chr4.1 | CDS | 18289508 | 18289689 | 18289508 | ID=cds.MS.gene36492.t1;Parent=MS.gene36492.t1 |
| chr4.1 | exon | 18289937 | 18290008 | 18289937 | ID=MS.gene36492.t1.exon3;Parent=MS.gene36492.t1 |
| chr4.1 | CDS | 18289937 | 18290008 | 18289937 | ID=cds.MS.gene36492.t1;Parent=MS.gene36492.t1 |
| chr4.1 | exon | 18290113 | 18290369 | 18290113 | ID=MS.gene36492.t1.exon4;Parent=MS.gene36492.t1 |
| chr4.1 | CDS | 18290113 | 18290369 | 18290113 | ID=cds.MS.gene36492.t1;Parent=MS.gene36492.t1 |
| chr4.1 | exon | 18290966 | 18291128 | 18290966 | ID=MS.gene36492.t1.exon5;Parent=MS.gene36492.t1 |
| chr4.1 | CDS | 18290966 | 18291128 | 18290966 | ID=cds.MS.gene36492.t1;Parent=MS.gene36492.t1 |
| chr4.1 | exon | 18291206 | 18291334 | 18291206 | ID=MS.gene36492.t1.exon6;Parent=MS.gene36492.t1 |
| chr4.1 | CDS | 18291206 | 18291334 | 18291206 | ID=cds.MS.gene36492.t1;Parent=MS.gene36492.t1 |
| chr4.1 | exon | 18291770 | 18292485 | 18291770 | ID=MS.gene36492.t1.exon7;Parent=MS.gene36492.t1 |
| chr4.1 | CDS | 18291770 | 18292485 | 18291770 | ID=cds.MS.gene36492.t1;Parent=MS.gene36492.t1 |
| chr4.1 | exon | 18292853 | 18293147 | 18292853 | ID=MS.gene36492.t1.exon8;Parent=MS.gene36492.t1 |
| chr4.1 | CDS | 18292853 | 18293147 | 18292853 | ID=cds.MS.gene36492.t1;Parent=MS.gene36492.t1 |
| Gene Sequence |
| Protein sequence |
