Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene33879.t1 | XP_013466257.1 | 89.2 | 482 | 43 | 1 | 1 | 473 | 1 | 482 | 1.30E-182 | 649.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene33879.t1 | Q93ZV7 | 53.1 | 475 | 165 | 7 | 6 | 472 | 6 | 430 | 4.8e-98 | 359.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene33879.t1 | A0A072VFS9 | 89.2 | 482 | 43 | 1 | 1 | 473 | 1 | 482 | 9.1e-183 | 649.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049129 | MS.gene33879 | -0.805129 | 1.55E-49 | -1.69E-46 |
MS.gene049255 | MS.gene33879 | 0.846258 | 2.43E-59 | -1.69E-46 |
MS.gene049824 | MS.gene33879 | 0.812315 | 4.51E-51 | -1.69E-46 |
MS.gene049825 | MS.gene33879 | 0.837366 | 5.42E-57 | -1.69E-46 |
MS.gene049873 | MS.gene33879 | 0.848113 | 7.54E-60 | -1.69E-46 |
MS.gene050277 | MS.gene33879 | 0.839618 | 1.42E-57 | -1.69E-46 |
MS.gene050303 | MS.gene33879 | 0.821987 | 3.01E-53 | -1.69E-46 |
MS.gene050689 | MS.gene33879 | 0.814779 | 1.29E-51 | -1.69E-46 |
MS.gene050916 | MS.gene33879 | 0.81975 | 9.86E-53 | -1.69E-46 |
MS.gene051328 | MS.gene33879 | 0.805457 | 1.32E-49 | -1.69E-46 |
MS.gene05134 | MS.gene33879 | 0.853229 | 2.74E-61 | -1.69E-46 |
MS.gene05188 | MS.gene33879 | 0.850951 | 1.22E-60 | -1.69E-46 |
MS.gene051975 | MS.gene33879 | 0.802581 | 5.24E-49 | -1.69E-46 |
MS.gene052947 | MS.gene33879 | 0.827701 | 1.35E-54 | -1.69E-46 |
MS.gene053080 | MS.gene33879 | 0.805795 | 1.12E-49 | -1.69E-46 |
MS.gene053122 | MS.gene33879 | 0.843428 | 1.41E-58 | -1.69E-46 |
MS.gene053226 | MS.gene33879 | 0.825558 | 4.39E-54 | -1.69E-46 |
MS.gene05364 | MS.gene33879 | 0.802707 | 4.94E-49 | -1.69E-46 |
MS.gene055162 | MS.gene33879 | 0.803226 | 3.86E-49 | -1.69E-46 |
MS.gene055555 | MS.gene33879 | 0.831968 | 1.24E-55 | -1.69E-46 |
MS.gene055580 | MS.gene33879 | -0.80388 | 2.82E-49 | -1.69E-46 |
MS.gene055808 | MS.gene33879 | 0.837462 | 5.13E-57 | -1.69E-46 |
MS.gene056043 | MS.gene33879 | -0.8029 | 4.50E-49 | -1.69E-46 |
MS.gene056091 | MS.gene33879 | 0.828699 | 7.78E-55 | -1.69E-46 |
MS.gene056403 | MS.gene33879 | 0.808293 | 3.33E-50 | -1.69E-46 |
MS.gene056631 | MS.gene33879 | 0.837697 | 4.46E-57 | -1.69E-46 |
MS.gene056986 | MS.gene33879 | 0.802707 | 4.94E-49 | -1.69E-46 |
MS.gene057140 | MS.gene33879 | 0.804846 | 1.78E-49 | -1.69E-46 |
MS.gene057705 | MS.gene33879 | 0.858078 | 1.05E-62 | -1.69E-46 |
MS.gene058783 | MS.gene33879 | 0.812178 | 4.83E-51 | -1.69E-46 |
MS.gene059146 | MS.gene33879 | 0.819457 | 1.15E-52 | -1.69E-46 |
MS.gene05954 | MS.gene33879 | 0.814388 | 1.58E-51 | -1.69E-46 |
MS.gene05978 | MS.gene33879 | 0.80192 | 7.17E-49 | -1.69E-46 |
MS.gene059842 | MS.gene33879 | 0.814813 | 1.27E-51 | -1.69E-46 |
MS.gene059901 | MS.gene33879 | -0.816414 | 5.60E-52 | -1.69E-46 |
MS.gene059935 | MS.gene33879 | 0.855838 | 4.82E-62 | -1.69E-46 |
MS.gene06001 | MS.gene33879 | 0.827522 | 1.49E-54 | -1.69E-46 |
MS.gene06011 | MS.gene33879 | 0.813981 | 1.94E-51 | -1.69E-46 |
MS.gene060429 | MS.gene33879 | 0.873119 | 1.88E-67 | -1.69E-46 |
MS.gene060586 | MS.gene33879 | 0.810465 | 1.14E-50 | -1.69E-46 |
MS.gene060763 | MS.gene33879 | 0.866402 | 2.93E-65 | -1.69E-46 |
MS.gene060830 | MS.gene33879 | 0.87407 | 9.00E-68 | -1.69E-46 |
MS.gene060917 | MS.gene33879 | 0.814576 | 1.44E-51 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene65076 | MS.gene33879 | PPI |
MS.gene002675 | MS.gene33879 | PPI |
MS.gene36492 | MS.gene33879 | PPI |
MS.gene028300 | MS.gene33879 | PPI |
MS.gene51868 | MS.gene33879 | PPI |
MS.gene33879 | MS.gene51112 | PPI |
MS.gene24199 | MS.gene33879 | PPI |
MS.gene66089 | MS.gene33879 | PPI |
MS.gene33879 | MS.gene067809 | PPI |
MS.gene98888 | MS.gene33879 | PPI |
MS.gene004357 | MS.gene33879 | PPI |
MS.gene94182 | MS.gene33879 | PPI |
MS.gene33879 | MS.gene27028 | PPI |
MS.gene43604 | MS.gene33879 | PPI |
MS.gene05792 | MS.gene33879 | PPI |
MS.gene023154 | MS.gene33879 | PPI |
MS.gene002676 | MS.gene33879 | PPI |
MS.gene064459 | MS.gene33879 | PPI |
MS.gene33879 | MS.gene63973 | PPI |
MS.gene35157 | MS.gene33879 | PPI |
MS.gene33879 | MS.gene43614 | PPI |
MS.gene05791 | MS.gene33879 | PPI |
MS.gene29720 | MS.gene33879 | PPI |
MS.gene08205 | MS.gene33879 | PPI |
MS.gene051451 | MS.gene33879 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene33879.t1 | MTR_1g026890 | 97.510 | 482 | 3 | 1 | 1 | 473 | 1 | 482 | 0.0 | 943 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene33879.t1 | AT4G32720 | 51.204 | 457 | 157 | 9 | 1 | 445 | 1 | 403 | 2.94e-143 | 416 |
MS.gene33879.t1 | AT4G32720 | 51.810 | 442 | 152 | 8 | 1 | 430 | 1 | 393 | 2.44e-141 | 412 |
MS.gene33879.t1 | AT1G79880 | 42.217 | 424 | 181 | 11 | 5 | 427 | 4 | 364 | 4.09e-96 | 296 |
MS.gene33879.t1 | AT1G79880 | 39.142 | 373 | 163 | 11 | 56 | 427 | 1 | 310 | 1.54e-69 | 225 |
MS.gene33879.t1 | AT1G79880 | 38.701 | 385 | 167 | 12 | 56 | 434 | 1 | 322 | 2.69e-69 | 225 |
MS.gene33879.t1 | AT2G43970 | 29.452 | 146 | 88 | 2 | 2 | 147 | 185 | 315 | 3.63e-12 | 68.9 |
MS.gene33879.t1 | AT5G46250 | 27.074 | 229 | 123 | 9 | 8 | 209 | 101 | 312 | 3.71e-12 | 68.6 |
MS.gene33879.t1 | AT2G43970 | 29.452 | 146 | 88 | 2 | 2 | 147 | 185 | 315 | 4.33e-12 | 68.6 |
MS.gene33879.t1 | AT5G46250 | 29.940 | 167 | 92 | 5 | 8 | 166 | 101 | 250 | 7.06e-12 | 67.0 |
MS.gene33879.t1 | AT5G46250 | 29.940 | 167 | 92 | 5 | 8 | 166 | 101 | 250 | 7.95e-12 | 67.0 |
Find 90 sgRNAs with CRISPR-Local
Find 342 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AATACTTTCTATATTTATTT+TGG | 0.150399 | 1.2:+12937124 | None:intergenic |
CGTGCTTTCTGAGCAGCTTC+AGG | 0.270223 | 1.2:+12937723 | None:intergenic |
AAGGCTATAACTAAGCCTTT+AGG | 0.286449 | 1.2:+12938498 | None:intergenic |
GCCGAAAAGGGCCAGGAAAC+TGG | 0.288268 | 1.2:-12938195 | MS.gene33879:CDS |
ACCTGCTCAATTACCTCTTC+TGG | 0.299485 | 1.2:+12939681 | None:intergenic |
AACCTGTCGTATAACCTTCT+TGG | 0.309750 | 1.2:+12942383 | None:intergenic |
CTCAATTACCTCTTCTGGCT+TGG | 0.321742 | 1.2:+12939686 | None:intergenic |
AGGCTATAACTAAGCCTTTA+GGG | 0.335538 | 1.2:+12938499 | None:intergenic |
AAGGTTGTGTTTCAGAAGTT+TGG | 0.339229 | 1.2:-12938114 | MS.gene33879:CDS |
ACGTGCTGCTGCAGCCCTTT+CGG | 0.339660 | 1.2:-12937703 | MS.gene33879:CDS |
TGCTGCAGCCCTTTCGGAAA+AGG | 0.341335 | 1.2:-12937697 | MS.gene33879:CDS |
CGTAATAGAGACAATGATTC+TGG | 0.344136 | 1.2:-12937156 | MS.gene33879:CDS |
AAGTAAAACTAACCGGTAAC+TGG | 0.344730 | 1.2:+12937636 | None:intergenic |
CTTTGCTTTGTTCCTTCAAT+CGG | 0.350383 | 1.2:-12940683 | MS.gene33879:CDS |
ACAGTACATAGATTTCAATA+TGG | 0.354619 | 1.2:-12937778 | MS.gene33879:intron |
TAACTACACAGTGGTTAGTT+TGG | 0.362858 | 1.2:-12940706 | MS.gene33879:intron |
GCTGCAGCCCTTTCGGAAAA+GGG | 0.363306 | 1.2:-12937696 | MS.gene33879:CDS |
TGAACTGCTCTTTAGTTTGA+AGG | 0.365442 | 1.2:+12938479 | None:intergenic |
TCAATTACCTCTTCTGGCTT+GGG | 0.381807 | 1.2:+12939687 | None:intergenic |
TGCGTGCCACTTACCTTCCT+CGG | 0.406995 | 1.2:+12937312 | None:intergenic |
TTCAATATGGGAGATGAGTC+AGG | 0.414927 | 1.2:-12937765 | MS.gene33879:CDS |
TACTAAGCCCGCCGATGTTA+AGG | 0.416987 | 1.2:-12940631 | MS.gene33879:CDS |
CAGGCGCTGAGCTAGAATTA+AGG | 0.418251 | 1.2:-12939090 | MS.gene33879:CDS |
AGAAGAGCCAAGAAAACAAT+GGG | 0.421708 | 1.2:-12938245 | MS.gene33879:CDS |
GGAGGCTGAAGGCGAAGAAA+AGG | 0.425040 | 1.2:-12938316 | MS.gene33879:CDS |
ATGCTTTCGCATCCGATTGA+AGG | 0.433367 | 1.2:+12940671 | None:intergenic |
GAAGAAGTGGAGTCCTTCTT+CGG | 0.441428 | 1.2:-12939609 | MS.gene33879:CDS |
GATTTCAGGTCAACAGTGTT+CGG | 0.445081 | 1.2:-12939219 | MS.gene33879:intron |
GCTACTCTAGATCCAGTTAC+CGG | 0.447734 | 1.2:-12937648 | MS.gene33879:intron |
CTTGGCATATTGACCGAAGA+AGG | 0.449259 | 1.2:+12939596 | None:intergenic |
AAATGGGGTGAAGGAAGAAA+AGG | 0.452338 | 1.2:-12938283 | MS.gene33879:CDS |
GGAGGAGGAAGGTATGGTAG+AGG | 0.458576 | 1.2:-12937192 | MS.gene33879:CDS |
TTTACTCAAGAAATCATCCC+TGG | 0.462095 | 1.2:+12942248 | None:intergenic |
TGCATTCCAGGGAGCAAAGT+TGG | 0.464023 | 1.2:-12939726 | MS.gene33879:intron |
TACTGTGAAGCTTGAAGAAG+TGG | 0.465343 | 1.2:-12939622 | MS.gene33879:CDS |
GGTGACTGAAGGTGCCGAAA+AGG | 0.481831 | 1.2:-12938208 | MS.gene33879:CDS |
TATCTTGTTTACCACGAAGC+TGG | 0.484324 | 1.2:+12937357 | None:intergenic |
AGCTTCACAGTATATTCAAA+TGG | 0.487645 | 1.2:+12939633 | None:intergenic |
CAGTACATAGATTTCAATAT+GGG | 0.489907 | 1.2:-12937777 | MS.gene33879:CDS |
TGTGTTATCCTCCTCGTGGT+TGG | 0.492162 | 1.2:+12938621 | None:intergenic |
TTCAGGGGAGGAGGAAGGTA+TGG | 0.496516 | 1.2:-12937198 | MS.gene33879:intron |
CTGCAGCCCTTTCGGAAAAG+GGG | 0.498607 | 1.2:-12937695 | MS.gene33879:CDS |
TTCCAGGGAGCAAAGTTGGC+AGG | 0.499364 | 1.2:-12939722 | MS.gene33879:intron |
TGTCTTACGTGAAGATTTGA+AGG | 0.499878 | 1.2:-12938133 | MS.gene33879:CDS |
GCCAGAAGAGGTAATTGAGC+AGG | 0.508078 | 1.2:-12939682 | MS.gene33879:CDS |
TGAAGGTGCCGAAAAGGGCC+AGG | 0.512350 | 1.2:-12938202 | MS.gene33879:CDS |
CCGAAAAGGGCCAGGAAACT+GGG | 0.514402 | 1.2:-12938194 | MS.gene33879:CDS |
ACTGTCAATGAAAGTGAAGA+TGG | 0.515278 | 1.2:-12942225 | MS.gene33879:CDS |
GTTTCTTCCTTAACATCGGC+GGG | 0.516206 | 1.2:+12940624 | None:intergenic |
TATTGTTACAGCTACCCTAA+AGG | 0.518011 | 1.2:-12938513 | MS.gene33879:intron |
CTTTGACGCAGAAAGAGAAA+AGG | 0.519218 | 1.2:-12938683 | MS.gene33879:CDS |
GTGACTGAAGGTGCCGAAAA+GGG | 0.521308 | 1.2:-12938207 | MS.gene33879:CDS |
GTTCGGTTGCCCCGTCATGT+TGG | 0.521804 | 1.2:-12939202 | MS.gene33879:CDS |
TGCAGCCCTTTCGGAAAAGG+GGG | 0.524299 | 1.2:-12937694 | MS.gene33879:CDS |
TCCTCAGCAGCAACTTCAGA+GGG | 0.526503 | 1.2:+12938405 | None:intergenic |
AGCCAAGAAAACAATGGGGC+AGG | 0.526829 | 1.2:-12938240 | MS.gene33879:CDS |
GACAGTTTCTTCCTTAACAT+CGG | 0.527307 | 1.2:+12940620 | None:intergenic |
CAATACTGGAGCCAGCTTCG+TGG | 0.527832 | 1.2:-12937368 | MS.gene33879:CDS |
TCAGTGATAGTAATCTTCCC+AGG | 0.528131 | 1.2:-12942266 | MS.gene33879:CDS |
ACCCTCTGAAGTTGCTGCTG+AGG | 0.528326 | 1.2:-12938406 | MS.gene33879:CDS |
GGAGGAAGGTATGGTAGAGG+AGG | 0.530321 | 1.2:-12937189 | MS.gene33879:CDS |
GAAAACAATGGGGCAGGTGA+AGG | 0.536070 | 1.2:-12938234 | MS.gene33879:CDS |
GAGATGAGTCAGGATTCATT+CGG | 0.541514 | 1.2:-12937755 | MS.gene33879:CDS |
AACCAAGAAGGTTATACGAC+AGG | 0.543197 | 1.2:-12942385 | MS.gene33879:intron |
TCACTCAAGCTATCAGAAGA+TGG | 0.556963 | 1.2:-12940564 | MS.gene33879:intron |
GATGCGAAAGCATCTTAAGT+TGG | 0.561750 | 1.2:-12940661 | MS.gene33879:CDS |
CAATGGGGCAGGTGAAGGAA+AGG | 0.574806 | 1.2:-12938229 | MS.gene33879:CDS |
TTCCTCAGCAGCAACTTCAG+AGG | 0.588125 | 1.2:+12938404 | None:intergenic |
CATCTGATGAGAACTCAACA+AGG | 0.591422 | 1.2:+12939152 | None:intergenic |
GAGAAGAGCCAAGAAAACAA+TGG | 0.592496 | 1.2:-12938246 | MS.gene33879:CDS |
CAATGGAGTGAACGAAGGAA+AGG | 0.592633 | 1.2:-12938337 | MS.gene33879:CDS |
TCAGAAGTTTGGTGATGTGA+AGG | 0.592670 | 1.2:-12938103 | MS.gene33879:intron |
CAGTGATAGTAATCTTCCCA+GGG | 0.596203 | 1.2:-12942265 | MS.gene33879:CDS |
GCAGCCCTTTCGGAAAAGGG+GGG | 0.596520 | 1.2:-12937693 | MS.gene33879:CDS |
AGTTTCTTCCTTAACATCGG+CGG | 0.596636 | 1.2:+12940623 | None:intergenic |
TTACTCAAGAAATCATCCCT+GGG | 0.601574 | 1.2:+12942249 | None:intergenic |
TGACGAAGAAACAACCAAGA+AGG | 0.605378 | 1.2:-12942397 | MS.gene33879:CDS |
TGAACTTCCCAAGCCAGAAG+AGG | 0.608914 | 1.2:-12939694 | MS.gene33879:CDS |
AGAGACAATGATTCTGGACG+AGG | 0.611973 | 1.2:-12937150 | MS.gene33879:CDS |
GACAATGATAAAGAAAACAA+TGG | 0.616572 | 1.2:-12938354 | MS.gene33879:CDS |
GGTGAAGGAAAGGTGACTGA+AGG | 0.628219 | 1.2:-12938219 | MS.gene33879:CDS |
CTTCTTCGGTCAATATGCCA+AGG | 0.638433 | 1.2:-12939595 | MS.gene33879:intron |
AACGAAGGAAAGGAGGCTGA+AGG | 0.639810 | 1.2:-12938327 | MS.gene33879:CDS |
TGGAGTGAACGAAGGAAAGG+AGG | 0.640717 | 1.2:-12938334 | MS.gene33879:CDS |
TATTTGTGTTATCCTCCTCG+TGG | 0.654110 | 1.2:+12938617 | None:intergenic |
GAAAACAATGGAGTGAACGA+AGG | 0.669742 | 1.2:-12938342 | MS.gene33879:CDS |
ATCTGATGAGAACTCAACAA+GGG | 0.670020 | 1.2:+12939153 | None:intergenic |
GAATGTGGGTTCCAACCACG+AGG | 0.704964 | 1.2:-12938632 | MS.gene33879:CDS |
TGTGGGTTCCAACCACGAGG+AGG | 0.705081 | 1.2:-12938629 | MS.gene33879:CDS |
GAAGAGCCAAGAAAACAATG+GGG | 0.727730 | 1.2:-12938244 | MS.gene33879:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTTATTTAACAAAAATAGTT+TGG | - | chr1.2:12940225-12940244 | MS.gene33879:intron | 10.0% |
!!! | AAATTGAAGTTTTTTATAAA+GGG | + | chr1.2:12940734-12940753 | None:intergenic | 10.0% |
!!! | AATACTTTCTATATTTATTT+TGG | + | chr1.2:12942415-12942434 | None:intergenic | 10.0% |
!!! | TTGTCTTTTTTTTATTTATT+TGG | - | chr1.2:12941554-12941573 | MS.gene33879:intron | 10.0% |
!!! | TTTTTTATAGAAAAATGTTT+AGG | - | chr1.2:12938308-12938327 | MS.gene33879:CDS | 10.0% |
!! | TAATATATGTATTTGTCAAA+TGG | + | chr1.2:12940622-12940641 | None:intergenic | 15.0% |
!! | TAGATATAAATTTCATTTAG+TGG | + | chr1.2:12939599-12939580 | None:intergenic | 15.0% |
!! | TATTAAAAAACTGTAATTGA+TGG | - | chr1.2:12940669-12940688 | MS.gene33879:CDS | 15.0% |
!! | TGTATATTCATTAAATTTCT+TGG | - | chr1.2:12940096-12940115 | MS.gene33879:intron | 15.0% |
!!! | AATTATATTAATACCTTTTC+AGG | - | chr1.2:12942321-12942340 | MS.gene33879:intron | 15.0% |
!!! | ATTATATTAATACCTTTTCA+GGG | - | chr1.2:12942322-12942341 | MS.gene33879:intron | 15.0% |
!!! | GAAATTGAAGTTTTTTATAA+AGG | + | chr1.2:12940735-12940754 | None:intergenic | 15.0% |
!!! | TTTATATTTTTAACGATGAA+AGG | - | chr1.2:12939335-12939354 | MS.gene33879:intron | 15.0% |
!! | AAAAATAGAGAAAATCATCA+AGG | + | chr1.2:12942262-12942281 | None:intergenic | 20.0% |
!! | AACAGCATAATCTAAATTAA+TGG | + | chr1.2:12939424-12939443 | None:intergenic | 20.0% |
!! | AATGAAATTTATATCTATCG+TGG | + | chr1.2:12939560-12939541 | None:intergenic | 20.0% |
!! | ATAGATAAATATCAAACCAA+AGG | + | chr1.2:12941501-12941520 | None:intergenic | 20.0% |
!! | ATTAATTAAGAGTTAATCGA+AGG | + | chr1.2:12939512-12939531 | None:intergenic | 20.0% |
!! | CAACAATTATACACAAAAAA+TGG | + | chr1.2:12939028-12939047 | None:intergenic | 20.0% |
!! | GAAATAAGTAATAAGTTATG+TGG | + | chr1.2:12939776-12939795 | None:intergenic | 20.0% |
!!! | ACATTTTTGTTTTTGATTTC+AGG | - | chr1.2:12940303-12940322 | MS.gene33879:intron | 20.0% |
!!! | ACTCAATTTTCTTAAATGAT+CGG | + | chr1.2:12937474-12937493 | None:intergenic | 20.0% |
!!! | AGATTTCTTTAAGATAAATC+TGG | - | chr1.2:12940158-12940177 | MS.gene33879:intron | 20.0% |
!!! | ATATGTTTTGAAACTTTTGA+AGG | - | chr1.2:12939620-12939639 | MS.gene33879:CDS | 20.0% |
!!! | ATCTAATTTTTCAATCAGTT+GGG | - | chr1.2:12941927-12941946 | MS.gene33879:intron | 20.0% |
!!! | ATTACTTTGCTTTCATTTTA+TGG | + | chr1.2:12940991-12941010 | None:intergenic | 20.0% |
!!! | GATGATTTTCTCTATTTTTT+GGG | - | chr1.2:12942263-12942282 | MS.gene33879:CDS | 20.0% |
!!! | TATGTTTTGAAACTTTTGAA+GGG | - | chr1.2:12939621-12939640 | MS.gene33879:CDS | 20.0% |
!!! | TGATGATTTTCTCTATTTTT+TGG | - | chr1.2:12942262-12942281 | MS.gene33879:CDS | 20.0% |
!!! | TTAGTGAATCATTAATTTTC+TGG | - | chr1.2:12939596-12939615 | MS.gene33879:CDS | 20.0% |
!!! | TTATATTAATACCTTTTCAG+GGG | - | chr1.2:12942323-12942342 | MS.gene33879:intron | 20.0% |
!!! | TTTGTTTATCAATTTGGTTT+AGG | - | chr1.2:12937361-12937380 | MS.gene33879:CDS | 20.0% |
! | AAACCTTCAAATATTAACCA+CGG | + | chr1.2:12940194-12940213 | None:intergenic | 25.0% |
! | AACTCTAAATTAACGATAGA+TGG | - | chr1.2:12939398-12939417 | MS.gene33879:intron | 25.0% |
! | ACAGTACATAGATTTCAATA+TGG | - | chr1.2:12941758-12941777 | MS.gene33879:intron | 25.0% |
! | ACCAAATTGATAAACAAAAG+AGG | + | chr1.2:12937359-12937378 | None:intergenic | 25.0% |
! | ATACACAAAAAATGGATGAA+TGG | + | chr1.2:12939020-12939039 | None:intergenic | 25.0% |
! | ATATATTAACATTAATGCCG+TGG | - | chr1.2:12940000-12940019 | MS.gene33879:intron | 25.0% |
! | ATTTATACTGTTCTGTTGTA+TGG | - | chr1.2:12939459-12939478 | MS.gene33879:intron | 25.0% |
! | CAGGTTATTAAAACAAAAGA+AGG | + | chr1.2:12941610-12941629 | None:intergenic | 25.0% |
! | CAGTACATAGATTTCAATAT+GGG | - | chr1.2:12941759-12941778 | MS.gene33879:intron | 25.0% |
! | CATTCTAACAGTATTATAGT+CGG | - | chr1.2:12940027-12940046 | MS.gene33879:intron | 25.0% |
! | CATTGATGTTAATATTACCT+TGG | + | chr1.2:12939961-12939980 | None:intergenic | 25.0% |
! | CCAAATTGATAAACAAAAGA+GGG | + | chr1.2:12937358-12937377 | None:intergenic | 25.0% |
! | GAATAATTAAGCAAAAACGA+CGG | + | chr1.2:12937184-12937203 | None:intergenic | 25.0% |
! | GACAATGATAAAGAAAACAA+TGG | - | chr1.2:12941182-12941201 | MS.gene33879:intron | 25.0% |
! | GAGACTTATTAATTAAATGG+TGG | + | chr1.2:12937951-12937970 | None:intergenic | 25.0% |
! | GATGTAAAAGTAAAACTAAC+CGG | + | chr1.2:12941910-12941929 | None:intergenic | 25.0% |
! | GTGATAAATTCATCTTAATC+AGG | - | chr1.2:12939059-12939078 | MS.gene33879:intron | 25.0% |
! | TCTAATTAAACATAGTTGTG+TGG | - | chr1.2:12939143-12939162 | MS.gene33879:CDS | 25.0% |
! | TGTATATATTTACTCAATGC+AGG | - | chr1.2:12940825-12940844 | MS.gene33879:intron | 25.0% |
!! | ATACATAAAGCATCATTACT+CGG | + | chr1.2:12940081-12940100 | None:intergenic | 25.0% |
!! | ATTTTCCTTGGTTTACATTT+TGG | + | chr1.2:12938735-12938754 | None:intergenic | 25.0% |
!! | TTGCTTTCATTTTATGGTTA+GGG | + | chr1.2:12940985-12941004 | None:intergenic | 25.0% |
!! | TTTGCTTTCATTTTATGGTT+AGG | + | chr1.2:12940986-12941005 | None:intergenic | 25.0% |
!!! | ACATGAAATTTTGTTTCTTG+GGG | - | chr1.2:12939673-12939692 | MS.gene33879:CDS | 25.0% |
!!! | ATTTGAATGCTTATTTTCCT+TGG | + | chr1.2:12938747-12938766 | None:intergenic | 25.0% |
!!! | CAATTTGGTTTAGGTTTTTA+GGG | - | chr1.2:12937370-12937389 | MS.gene33879:CDS | 25.0% |
!!! | CACATGAAATTTTGTTTCTT+GGG | - | chr1.2:12939672-12939691 | MS.gene33879:CDS | 25.0% |
!!! | CATCTAATTTTTCAATCAGT+TGG | - | chr1.2:12941926-12941945 | MS.gene33879:intron | 25.0% |
!!! | CATTGATTTAGATTTAGAGA+TGG | - | chr1.2:12939483-12939502 | MS.gene33879:intron | 25.0% |
!!! | CCATTCAATTCAATTTTAGT+GGG | - | chr1.2:12937871-12937890 | MS.gene33879:intron | 25.0% |
!!! | CTAGTGACAATGATTTTTTA+TGG | - | chr1.2:12941988-12942007 | MS.gene33879:intron | 25.0% |
!!! | GAAGAAATGAAACTGATTTT+AGG | + | chr1.2:12938083-12938102 | None:intergenic | 25.0% |
!!! | GGTTTTGTTAATGTAATTGA+AGG | - | chr1.2:12937391-12937410 | MS.gene33879:intron | 25.0% |
!!! | TCAATTTGGTTTAGGTTTTT+AGG | - | chr1.2:12937369-12937388 | MS.gene33879:CDS | 25.0% |
!!! | TCACATGAAATTTTGTTTCT+TGG | - | chr1.2:12939671-12939690 | MS.gene33879:CDS | 25.0% |
!!! | TGGATTTTGACAGAAAATAT+TGG | + | chr1.2:12940602-12940621 | None:intergenic | 25.0% |
AAAAAGAGTAATCTCTGCTA+AGG | + | chr1.2:12938292-12938311 | None:intergenic | 30.0% | |
AAAAGGAGCAAGAGAAAAAT+GGG | - | chr1.2:12941237-12941256 | MS.gene33879:intron | 30.0% | |
AACAGAACAGTATAAATCGA+AGG | + | chr1.2:12939456-12939475 | None:intergenic | 30.0% | |
AACCTTCAAATATTAACCAC+GGG | + | chr1.2:12940193-12940212 | None:intergenic | 30.0% | |
AAGCAAAAATTAGTGTATGC+AGG | - | chr1.2:12940427-12940446 | MS.gene33879:intron | 30.0% | |
AGCTTCACAGTATATTCAAA+TGG | + | chr1.2:12939906-12939925 | None:intergenic | 30.0% | |
ATAAACAAAAGAGGGCAAAA+TGG | + | chr1.2:12937350-12937369 | None:intergenic | 30.0% | |
ATCTATGAACATGCTTACTT+TGG | + | chr1.2:12940472-12940491 | None:intergenic | 30.0% | |
ATTTACTAACTTCTACCTGT+GGG | - | chr1.2:12940758-12940777 | MS.gene33879:intron | 30.0% | |
CAATCTCTCCTATTCTTAAT+TGG | + | chr1.2:12939191-12939210 | None:intergenic | 30.0% | |
CACTAAAATGGCTAATTCTA+CGG | + | chr1.2:12938059-12938078 | None:intergenic | 30.0% | |
CCCACTAAAATTGAATTGAA+TGG | + | chr1.2:12937874-12937893 | None:intergenic | 30.0% | |
GAAAAATCTCGTAAGAATGT+GGG | - | chr1.2:12940890-12940909 | MS.gene33879:intron | 30.0% | |
GGCGAGACTTATTAATTAAA+TGG | + | chr1.2:12937954-12937973 | None:intergenic | 30.0% | |
GTCAATACCAGTAAAAAGTA+GGG | - | chr1.2:12938147-12938166 | MS.gene33879:CDS | 30.0% | |
TAATTAATAAGTCTCGCCAT+TGG | - | chr1.2:12937956-12937975 | MS.gene33879:intron | 30.0% | |
TACCAATCAAGAATAAGTCT+CGG | + | chr1.2:12942125-12942144 | None:intergenic | 30.0% | |
TACTGTTAGAATGTAAACCA+CGG | + | chr1.2:12940020-12940039 | None:intergenic | 30.0% | |
TCATATCTTACTTGATCCAA+TGG | + | chr1.2:12937975-12937994 | None:intergenic | 30.0% | |
TGAAAAATCTCGTAAGAATG+TGG | - | chr1.2:12940889-12940908 | MS.gene33879:intron | 30.0% | |
TGAGTAAAATTGTGAAGTAC+CGG | - | chr1.2:12937489-12937508 | MS.gene33879:intron | 30.0% | |
TGAGTTAAAGATCTAAACCA+CGG | + | chr1.2:12941634-12941653 | None:intergenic | 30.0% | |
TTCTTGATTGGTATGTAATC+AGG | - | chr1.2:12942132-12942151 | MS.gene33879:intron | 30.0% | |
TTGAGTGCAATTACAAGTTT+CGG | + | chr1.2:12938501-12938520 | None:intergenic | 30.0% | |
TTTGCTAGCCAATTAAGAAT+AGG | - | chr1.2:12939180-12939199 | MS.gene33879:CDS | 30.0% | |
! | AAATAGTTTGGAGTATAGTC+TGG | - | chr1.2:12940237-12940256 | MS.gene33879:intron | 30.0% |
! | ATAGTGGAAAAAAACTTGTC+TGG | - | chr1.2:12938012-12938031 | MS.gene33879:intron | 30.0% |
! | ATCACTATCGTGTTTTATGT+CGG | + | chr1.2:12937436-12937455 | None:intergenic | 30.0% |
! | GCCATTCAATTCAATTTTAG+TGG | - | chr1.2:12937870-12937889 | MS.gene33879:intron | 30.0% |
! | TAATTTAGAGTTAGCGATAG+TGG | - | chr1.2:12939221-12939240 | MS.gene33879:intron | 30.0% |
! | TCCTAAAGACTATAGTTTGT+TGG | - | chr1.2:12938655-12938674 | MS.gene33879:CDS | 30.0% |
! | TGCTTTCATTTTATGGTTAG+GGG | + | chr1.2:12940984-12941003 | None:intergenic | 30.0% |
! | TTTTTGTACCTGTATCATAC+CGG | - | chr1.2:12937733-12937752 | MS.gene33879:CDS | 30.0% |
!! | ATTTGTTGTTGGATTTGGAA+TGG | - | chr1.2:12937805-12937824 | MS.gene33879:intron | 30.0% |
!! | CCCTCTTTTGTTTATCAATT+TGG | - | chr1.2:12937355-12937374 | MS.gene33879:CDS | 30.0% |
!! | CCTAAAGACTATAGTTTGTT+GGG | - | chr1.2:12938656-12938675 | MS.gene33879:CDS | 30.0% |
!! | GTTACATTTGTTGTTGGATT+TGG | - | chr1.2:12937800-12937819 | MS.gene33879:intron | 30.0% |
!! | TTTGTTGTTGGATTTGGAAT+GGG | - | chr1.2:12937806-12937825 | MS.gene33879:intron | 30.0% |
!! | TTTTGTTTGTTTGAAACTGC+AGG | - | chr1.2:12937235-12937254 | MS.gene33879:intron | 30.0% |
!!! | ATTTTAGTGGGTTAGTTCTA+TGG | - | chr1.2:12937883-12937902 | MS.gene33879:intron | 30.0% |
!!! | CTGATTTTAGGACACTAAAA+TGG | + | chr1.2:12938071-12938090 | None:intergenic | 30.0% |
!!! | GACAAGTTTTTTTCCACTAT+TGG | + | chr1.2:12938012-12938031 | None:intergenic | 30.0% |
AAAGAGGGCAAAATGGTAAA+AGG | + | chr1.2:12937343-12937362 | None:intergenic | 35.0% | |
AAAGGAGCAAGAGAAAAATG+GGG | - | chr1.2:12941238-12941257 | MS.gene33879:intron | 35.0% | |
AAGGCTATAACTAAGCCTTT+AGG | + | chr1.2:12941041-12941060 | None:intergenic | 35.0% | |
AAGGTTGTGTTTCAGAAGTT+TGG | - | chr1.2:12941422-12941441 | MS.gene33879:intron | 35.0% | |
AAGTAAAACTAACCGGTAAC+TGG | + | chr1.2:12941903-12941922 | None:intergenic | 35.0% | |
ACCAATCAAGAATAAGTCTC+GGG | + | chr1.2:12942124-12942143 | None:intergenic | 35.0% | |
ACTGTCAATGAAAGTGAAGA+TGG | - | chr1.2:12937311-12937330 | MS.gene33879:intron | 35.0% | |
AGAAGAGCCAAGAAAACAAT+GGG | - | chr1.2:12941291-12941310 | MS.gene33879:intron | 35.0% | |
AGGCTATAACTAAGCCTTTA+GGG | + | chr1.2:12941040-12941059 | None:intergenic | 35.0% | |
ATCCCGTGGTTAATATTTGA+AGG | - | chr1.2:12940188-12940207 | MS.gene33879:intron | 35.0% | |
ATCTGATGAGAACTCAACAA+GGG | + | chr1.2:12940386-12940405 | None:intergenic | 35.0% | |
CAGAAACAAAATGTCACATG+TGG | + | chr1.2:12939743-12939762 | None:intergenic | 35.0% | |
CATTTACTAACTTCTACCTG+TGG | - | chr1.2:12940757-12940776 | MS.gene33879:intron | 35.0% | |
CCCAACAAACTATAGTCTTT+AGG | + | chr1.2:12938659-12938678 | None:intergenic | 35.0% | |
CGTAATAGAGACAATGATTC+TGG | - | chr1.2:12942380-12942399 | MS.gene33879:intron | 35.0% | |
CGTCAATACCAGTAAAAAGT+AGG | - | chr1.2:12938146-12938165 | MS.gene33879:CDS | 35.0% | |
CTCATGTTTACCAGAATCAT+AGG | + | chr1.2:12940140-12940159 | None:intergenic | 35.0% | |
CTGAAATTCTAACTACACAG+TGG | - | chr1.2:12938821-12938840 | MS.gene33879:intron | 35.0% | |
CTTGTAATTGCACTCAATTC+TGG | - | chr1.2:12938504-12938523 | MS.gene33879:CDS | 35.0% | |
GAAAAGGAGCAAGAGAAAAA+TGG | - | chr1.2:12941236-12941255 | MS.gene33879:intron | 35.0% | |
GACAGTTTCTTCCTTAACAT+CGG | + | chr1.2:12938919-12938938 | None:intergenic | 35.0% | |
GCTTTCAATCAGACAAGTTT+CGG | + | chr1.2:12938444-12938463 | None:intergenic | 35.0% | |
GTGAAGCTGAAAAACAATAC+TGG | - | chr1.2:12942154-12942173 | MS.gene33879:intron | 35.0% | |
TATATTTACTCAATGCAGGC+AGG | - | chr1.2:12940829-12940848 | MS.gene33879:intron | 35.0% | |
TATTGTTACAGCTACCCTAA+AGG | - | chr1.2:12941023-12941042 | MS.gene33879:intron | 35.0% | |
TCACGTAAATATGAGAGTGA+AGG | + | chr1.2:12937842-12937861 | None:intergenic | 35.0% | |
TCACTCAAAACCAGAAAAAG+TGG | + | chr1.2:12937548-12937567 | None:intergenic | 35.0% | |
TCCTACCAAAATGTAAACCA+AGG | - | chr1.2:12938727-12938746 | MS.gene33879:intron | 35.0% | |
TCTATCCAAAGATGTGTTGT+GGG | + | chr1.2:12938240-12938259 | None:intergenic | 35.0% | |
TTACTCAAGAAATCATCCCT+GGG | + | chr1.2:12937290-12937309 | None:intergenic | 35.0% | |
TTTACTAACTTCTACCTGTG+GGG | - | chr1.2:12940759-12940778 | MS.gene33879:intron | 35.0% | |
TTTACTCAAGAAATCATCCC+TGG | + | chr1.2:12937291-12937310 | None:intergenic | 35.0% | |
! | ACTTTTTGTCTCCAACATGA+CGG | + | chr1.2:12940348-12940367 | None:intergenic | 35.0% |
! | CTATAGTCTTTAGGAGAAGT+TGG | + | chr1.2:12938650-12938669 | None:intergenic | 35.0% |
! | CTTTGCTTTGTTCCTTCAAT+CGG | - | chr1.2:12938853-12938872 | MS.gene33879:intron | 35.0% |
! | GAGACTTTTTGATCCAATAG+TGG | - | chr1.2:12937996-12938015 | MS.gene33879:intron | 35.0% |
! | GTCACGTCATTATTCTTTTC+TGG | + | chr1.2:12941092-12941111 | None:intergenic | 35.0% |
! | TAACTACACAGTGGTTAGTT+TGG | - | chr1.2:12938830-12938849 | MS.gene33879:intron | 35.0% |
! | TGGTGATGTGAAGGTAAATA+TGG | - | chr1.2:12941442-12941461 | MS.gene33879:intron | 35.0% |
! | TTTTGTACCTGTATCATACC+GGG | - | chr1.2:12937734-12937753 | MS.gene33879:CDS | 35.0% |
!! | TATTAATACCTTTTCAGGGG+AGG | - | chr1.2:12942326-12942345 | MS.gene33879:intron | 35.0% |
!! | TCCTTGGTTTACATTTTGGT+AGG | + | chr1.2:12938731-12938750 | None:intergenic | 35.0% |
!! | TGAAACTTTTGAAGGGTAGA+TGG | - | chr1.2:12939628-12939647 | MS.gene33879:CDS | 35.0% |
!! | TGAACTGCTCTTTAGTTTGA+AGG | + | chr1.2:12941060-12941079 | None:intergenic | 35.0% |
!!! | CTCTATTTTTTGGGATCACT+GGG | - | chr1.2:12942272-12942291 | MS.gene33879:CDS | 35.0% |
!!! | GTTTTTTATAAAGGGATGCC+AGG | + | chr1.2:12940726-12940745 | None:intergenic | 35.0% |
!!! | TCTATTTTTTGGGATCACTG+GGG | - | chr1.2:12942273-12942292 | MS.gene33879:CDS | 35.0% |
!!! | TCTCTATTTTTTGGGATCAC+TGG | - | chr1.2:12942271-12942290 | MS.gene33879:CDS | 35.0% |
!!! | TTGTTTTAATAACCTGACCG+TGG | - | chr1.2:12941614-12941633 | MS.gene33879:intron | 35.0% |
AAACGTTAGGACTCTGTTAG+TGG | + | chr1.2:12938415-12938434 | None:intergenic | 40.0% | |
AAATGGGGTGAAGGAAGAAA+AGG | - | chr1.2:12941253-12941272 | MS.gene33879:intron | 40.0% | |
AACCAAGAAGGTTATACGAC+AGG | - | chr1.2:12937151-12937170 | MS.gene33879:CDS | 40.0% | |
AACCTGTCGTATAACCTTCT+TGG | + | chr1.2:12937156-12937175 | None:intergenic | 40.0% | |
AACGTTAGGACTCTGTTAGT+GGG | + | chr1.2:12938414-12938433 | None:intergenic | 40.0% | |
AATCTGGTATTTGAATCCCG+TGG | - | chr1.2:12940174-12940193 | MS.gene33879:intron | 40.0% | |
AGTTTCTTCCTTAACATCGG+CGG | + | chr1.2:12938916-12938935 | None:intergenic | 40.0% | |
CACAACACATCTTTGGATAG+AGG | - | chr1.2:12938239-12938258 | MS.gene33879:CDS | 40.0% | |
CAGTGATAGTAATCTTCCCA+GGG | - | chr1.2:12937271-12937290 | MS.gene33879:intron | 40.0% | |
CATCTGATGAGAACTCAACA+AGG | + | chr1.2:12940387-12940406 | None:intergenic | 40.0% | |
CATTCTATTCGTGCATTCCA+GGG | - | chr1.2:12939799-12939818 | MS.gene33879:intron | 40.0% | |
CCAATCAAGAATAAGTCTCG+GGG | + | chr1.2:12942123-12942142 | None:intergenic | 40.0% | |
CTATCCAAAGATGTGTTGTG+GGG | + | chr1.2:12938239-12938258 | None:intergenic | 40.0% | |
CTCTATCCAAAGATGTGTTG+TGG | + | chr1.2:12938241-12938260 | None:intergenic | 40.0% | |
CTTAATCAGGCAACAGCAAT+AGG | - | chr1.2:12939072-12939091 | MS.gene33879:intron | 40.0% | |
CTTGGTGAAAAGTTGAAGCA+TGG | - | chr1.2:12940114-12940133 | MS.gene33879:intron | 40.0% | |
CTTTGACGCAGAAAGAGAAA+AGG | - | chr1.2:12940853-12940872 | MS.gene33879:intron | 40.0% | |
GAAAACAATGGAGTGAACGA+AGG | - | chr1.2:12941194-12941213 | MS.gene33879:intron | 40.0% | |
GAAGAGCCAAGAAAACAATG+GGG | - | chr1.2:12941292-12941311 | MS.gene33879:intron | 40.0% | |
GAGAAGAGCCAAGAAAACAA+TGG | - | chr1.2:12941290-12941309 | MS.gene33879:intron | 40.0% | |
GAGATGAGTCAGGATTCATT+CGG | - | chr1.2:12941781-12941800 | MS.gene33879:intron | 40.0% | |
GGAGACAAAAAGTTCTTCTG+TGG | - | chr1.2:12940355-12940374 | MS.gene33879:intron | 40.0% | |
GGTAGGATATCTCTGTAAGT+GGG | + | chr1.2:12938714-12938733 | None:intergenic | 40.0% | |
GTAGGATATCTCTGTAAGTG+GGG | + | chr1.2:12938713-12938732 | None:intergenic | 40.0% | |
GTGAGTGATTATGATTCTCC+TGG | - | chr1.2:12940705-12940724 | MS.gene33879:intron | 40.0% | |
TAAAGATCTAAACCACGGTC+AGG | + | chr1.2:12941629-12941648 | None:intergenic | 40.0% | |
TAATTGGCTAGCAAAGTGAG+AGG | + | chr1.2:12939175-12939194 | None:intergenic | 40.0% | |
TACTGTGAAGCTTGAAGAAG+TGG | - | chr1.2:12939914-12939933 | MS.gene33879:intron | 40.0% | |
TATTTGTGTTATCCTCCTCG+TGG | + | chr1.2:12940922-12940941 | None:intergenic | 40.0% | |
TCACTCAAGCTATCAGAAGA+TGG | - | chr1.2:12938972-12938991 | MS.gene33879:intron | 40.0% | |
TCAGTGATAGTAATCTTCCC+AGG | - | chr1.2:12937270-12937289 | MS.gene33879:intron | 40.0% | |
TCATTCTATTCGTGCATTCC+AGG | - | chr1.2:12939798-12939817 | MS.gene33879:intron | 40.0% | |
TCTGTGTACCTATGCAACAT+AGG | - | chr1.2:12937764-12937783 | MS.gene33879:CDS | 40.0% | |
TGACGAAGAAACAACCAAGA+AGG | - | chr1.2:12937139-12937158 | MS.gene33879:CDS | 40.0% | |
TGATGTGTCAGAATCGTGTA+AGG | - | chr1.2:12938546-12938565 | MS.gene33879:intron | 40.0% | |
TGGTAGGATATCTCTGTAAG+TGG | + | chr1.2:12938715-12938734 | None:intergenic | 40.0% | |
TTCAATATGGGAGATGAGTC+AGG | - | chr1.2:12941771-12941790 | MS.gene33879:intron | 40.0% | |
! | AATAGGAGAGATTGCTGTTC+TGG | - | chr1.2:12939197-12939216 | MS.gene33879:CDS | 40.0% |
! | CATAAAGCATCATTACTCGG+AGG | + | chr1.2:12940078-12940097 | None:intergenic | 40.0% |
! | CTTTTTGTCTCCAACATGAC+GGG | + | chr1.2:12940347-12940366 | None:intergenic | 40.0% |
! | GATTTCAGGTCAACAGTGTT+CGG | - | chr1.2:12940317-12940336 | MS.gene33879:intron | 40.0% |
! | GGGTTTTTGCTCATCTGTTT+TGG | + | chr1.2:12941114-12941133 | None:intergenic | 40.0% |
! | GTCTGTTTGGTTCAAACAAG+AGG | + | chr1.2:12942101-12942120 | None:intergenic | 40.0% |
! | TAAGGTGTTCGTGTTTGTGT+CGG | - | chr1.2:12938564-12938583 | MS.gene33879:intron | 40.0% |
! | TAATCTCTGCTAAGGTGCTT+AGG | + | chr1.2:12938284-12938303 | None:intergenic | 40.0% |
! | TATCTTGTTTACCACGAAGC+TGG | + | chr1.2:12942182-12942201 | None:intergenic | 40.0% |
! | TCTGTTAGTGGGTAATCTGT+TGG | + | chr1.2:12938403-12938422 | None:intergenic | 40.0% |
! | TTTTTGTCTCCAACATGACG+GGG | + | chr1.2:12940346-12940365 | None:intergenic | 40.0% |
!! | AAAGTTTTAGCAACCGAGGA+AGG | - | chr1.2:12942211-12942230 | MS.gene33879:intron | 40.0% |
!! | AGAGAAAGTTTTAGCAACCG+AGG | - | chr1.2:12942207-12942226 | MS.gene33879:intron | 40.0% |
!! | CAAGTCTTGTTGTCAACGTT+GGG | + | chr1.2:12938602-12938621 | None:intergenic | 40.0% |
!! | CTGGCAGTTACATTTGTTGT+TGG | - | chr1.2:12937794-12937813 | MS.gene33879:intron | 40.0% |
!! | GATGCGAAAGCATCTTAAGT+TGG | - | chr1.2:12938875-12938894 | MS.gene33879:intron | 40.0% |
!! | GTAAAATTGTGAAGTACCGG+CGG | - | chr1.2:12937492-12937511 | MS.gene33879:intron | 40.0% |
!! | TCAAGTCTTGTTGTCAACGT+TGG | + | chr1.2:12938603-12938622 | None:intergenic | 40.0% |
!! | TCAATTACCTCTTCTGGCTT+GGG | + | chr1.2:12939852-12939871 | None:intergenic | 40.0% |
!! | TCAGAAGTTTGGTGATGTGA+AGG | - | chr1.2:12941433-12941452 | MS.gene33879:intron | 40.0% |
!!! | CTATTTTTTGGGATCACTGG+GGG | - | chr1.2:12942274-12942293 | MS.gene33879:CDS | 40.0% |
!!! | CTGTTTTTTTCCCAGTTTCC+TGG | + | chr1.2:12941355-12941374 | None:intergenic | 40.0% |
AATAAGTCTCGGGGTCTGTT+TGG | + | chr1.2:12942114-12942133 | None:intergenic | 45.0% | |
ACCTGCTCAATTACCTCTTC+TGG | + | chr1.2:12939858-12939877 | None:intergenic | 45.0% | |
ACTTGAATATACGCCCTTGC+GGG | - | chr1.2:12938617-12938636 | MS.gene33879:CDS | 45.0% | |
AGAGACAATGATTCTGGACG+AGG | - | chr1.2:12942386-12942405 | MS.gene33879:CDS | 45.0% | |
AGGTACACAGATACAGTACC+CGG | + | chr1.2:12937755-12937774 | None:intergenic | 45.0% | |
ATGCAACATAGGTCGATGTC+TGG | - | chr1.2:12937775-12937794 | MS.gene33879:CDS | 45.0% | |
ATGCTTTCGCATCCGATTGA+AGG | + | chr1.2:12938868-12938887 | None:intergenic | 45.0% | |
CAATCCCCACAACACATCTT+TGG | - | chr1.2:12938232-12938251 | MS.gene33879:CDS | 45.0% | |
CAATCGAGTCACAACGACTA+GGG | + | chr1.2:12938177-12938196 | None:intergenic | 45.0% | |
CAATGGAGTGAACGAAGGAA+AGG | - | chr1.2:12941199-12941218 | MS.gene33879:intron | 45.0% | |
CCCCGAGACTTATTCTTGAT+TGG | - | chr1.2:12942120-12942139 | MS.gene33879:intron | 45.0% | |
CTAGAGCTTTGCAAAGAGAG+TGG | + | chr1.2:12939279-12939298 | None:intergenic | 45.0% | |
CTATGGTGCACAAGTGAGAT+AGG | - | chr1.2:12937900-12937919 | MS.gene33879:intron | 45.0% | |
CTGTTGGGACTTTCTTCCTT+TGG | - | chr1.2:12941482-12941501 | MS.gene33879:intron | 45.0% | |
CTTCTTCGGTCAATATGCCA+AGG | - | chr1.2:12939941-12939960 | MS.gene33879:intron | 45.0% | |
CTTGGCATATTGACCGAAGA+AGG | + | chr1.2:12939943-12939962 | None:intergenic | 45.0% | |
GAAGAAGTGGAGTCCTTCTT+CGG | - | chr1.2:12939927-12939946 | MS.gene33879:intron | 45.0% | |
GACATCGACCTATGTTGCAT+AGG | + | chr1.2:12937775-12937794 | None:intergenic | 45.0% | |
GACTTGAATATACGCCCTTG+CGG | - | chr1.2:12938616-12938635 | MS.gene33879:CDS | 45.0% | |
GCAAGAGAAAAATGGGGTGA+AGG | - | chr1.2:12941244-12941263 | MS.gene33879:intron | 45.0% | |
GCTACTCTAGATCCAGTTAC+CGG | - | chr1.2:12941888-12941907 | MS.gene33879:intron | 45.0% | |
GTCGACTACAACAGCATAGA+AGG | + | chr1.2:12939257-12939276 | None:intergenic | 45.0% | |
GTTGTGACTCGATTGGTAAG+CGG | - | chr1.2:12938182-12938201 | MS.gene33879:CDS | 45.0% | |
GTTTCTTCCTTAACATCGGC+GGG | + | chr1.2:12938915-12938934 | None:intergenic | 45.0% | |
TACAGTACCCGGTATGATAC+AGG | + | chr1.2:12937744-12937763 | None:intergenic | 45.0% | |
TGAAGCATGGCCTATGATTC+TGG | - | chr1.2:12940127-12940146 | MS.gene33879:intron | 45.0% | |
TGTCAGACACAGACATGTGT+TGG | + | chr1.2:12938478-12938497 | None:intergenic | 45.0% | |
! | CTCAATTACCTCTTCTGGCT+TGG | + | chr1.2:12939853-12939872 | None:intergenic | 45.0% |
! | GTTTCGGTGCAACAAACGTT+AGG | + | chr1.2:12938428-12938447 | None:intergenic | 45.0% |
!! | AGTTTGTTGGGATGCTCTGT+GGG | - | chr1.2:12938668-12938687 | MS.gene33879:CDS | 45.0% |
!! | TAATACCTTTTCAGGGGAGG+AGG | - | chr1.2:12942329-12942348 | MS.gene33879:intron | 45.0% |
!! | TAGTTTGTTGGGATGCTCTG+TGG | - | chr1.2:12938667-12938686 | MS.gene33879:CDS | 45.0% |
!!! | GGGTTTGCCCTACTTTTTAC+TGG | + | chr1.2:12938157-12938176 | None:intergenic | 45.0% |
!! | ATATTATTATAATTTCTTAT+AGG | - | chr1.2:12940554-12940573 | MS.gene33879:intron | 5.0% |
!!! | AATATATATTTTTTTTTTGA+AGG | + | chr1.2:12939987-12940006 | None:intergenic | 5.0% |
!!! | ATTTTTAAAAAATTAAAGTA+TGG | + | chr1.2:12937705-12937724 | None:intergenic | 5.0% |
!!! | TTTTTAAAAAATTAAAGTAT+GGG | + | chr1.2:12937704-12937723 | None:intergenic | 5.0% |
AACGAAGGAAAGGAGGCTGA+AGG | - | chr1.2:12941209-12941228 | MS.gene33879:intron | 50.0% | |
AAGTCCCAACAGCTGGAGAA+CGG | + | chr1.2:12941474-12941493 | None:intergenic | 50.0% | |
AGCCAAGAAAACAATGGGGC+AGG | - | chr1.2:12941296-12941315 | MS.gene33879:intron | 50.0% | |
AGGAAGAAAGTCCCAACAGC+TGG | + | chr1.2:12941481-12941500 | None:intergenic | 50.0% | |
ATCTCTGTAAGTGGGGCCTT+TGG | + | chr1.2:12938706-12938725 | None:intergenic | 50.0% | |
CACAGACATGTGTTGGACAC+TGG | + | chr1.2:12938471-12938490 | None:intergenic | 50.0% | |
CCAATCGAGTCACAACGACT+AGG | + | chr1.2:12938178-12938197 | None:intergenic | 50.0% | |
CCTAGTCGTTGTGACTCGAT+TGG | - | chr1.2:12938175-12938194 | MS.gene33879:CDS | 50.0% | |
CTTGAATATACGCCCTTGCG+GGG | - | chr1.2:12938618-12938637 | MS.gene33879:CDS | 50.0% | |
GAAAACAATGGGGCAGGTGA+AGG | - | chr1.2:12941302-12941321 | MS.gene33879:intron | 50.0% | |
GCATCATTACTCGGAGGCTA+AGG | + | chr1.2:12940072-12940091 | None:intergenic | 50.0% | |
GCCAGAAGAGGTAATTGAGC+AGG | - | chr1.2:12939854-12939873 | MS.gene33879:intron | 50.0% | |
GGTGAAGGAAAGGTGACTGA+AGG | - | chr1.2:12941317-12941336 | MS.gene33879:intron | 50.0% | |
TACTAAGCCCGCCGATGTTA+AGG | - | chr1.2:12938905-12938924 | MS.gene33879:intron | 50.0% | |
TAGCAACCGAGGAAGGTAAG+TGG | - | chr1.2:12942218-12942237 | MS.gene33879:intron | 50.0% | |
TCCTCAGCAGCAACTTCAGA+GGG | + | chr1.2:12941134-12941153 | None:intergenic | 50.0% | |
TGAACTTCCCAAGCCAGAAG+AGG | - | chr1.2:12939842-12939861 | MS.gene33879:intron | 50.0% | |
TGCATTCCAGGGAGCAAAGT+TGG | - | chr1.2:12939810-12939829 | MS.gene33879:intron | 50.0% | |
TGGAGTGAACGAAGGAAAGG+AGG | - | chr1.2:12941202-12941221 | MS.gene33879:intron | 50.0% | |
TGTGTTATCCTCCTCGTGGT+TGG | + | chr1.2:12940918-12940937 | None:intergenic | 50.0% | |
TTAGGTGAGTTGCGTCCCTT+TGG | - | chr1.2:12938326-12938345 | MS.gene33879:CDS | 50.0% | |
TTCCTCAGCAGCAACTTCAG+AGG | + | chr1.2:12941135-12941154 | None:intergenic | 50.0% | |
TTTCCCGTTCTCCAGCTGTT+GGG | - | chr1.2:12941467-12941486 | MS.gene33879:intron | 50.0% | |
! | CACCTGCCCCATTGTTTTCT+TGG | + | chr1.2:12941301-12941320 | None:intergenic | 50.0% |
! | GTTTGTTGGGATGCTCTGTG+GGG | - | chr1.2:12938669-12938688 | MS.gene33879:CDS | 50.0% |
! | TAAGCCCCCCTTTTCCGAAA+GGG | + | chr1.2:12941850-12941869 | None:intergenic | 50.0% |
! | TGTTTGTGTCGGTGCTTCAC+AGG | - | chr1.2:12938575-12938594 | MS.gene33879:intron | 50.0% |
! | TTTTCCCGTTCTCCAGCTGT+TGG | - | chr1.2:12941466-12941485 | MS.gene33879:intron | 50.0% |
!! | CAGGCGCTGAGCTAGAATTA+AGG | - | chr1.2:12940446-12940465 | MS.gene33879:intron | 50.0% |
!! | CCAGAAAAAGTGGAGTACCG+CGG | + | chr1.2:12937538-12937557 | None:intergenic | 50.0% |
!! | GTGACTGAAGGTGCCGAAAA+GGG | - | chr1.2:12941329-12941348 | MS.gene33879:intron | 50.0% |
AAGACTGTCTTACGCCCCAC+AGG | + | chr1.2:12940776-12940795 | None:intergenic | 55.0% | |
ACCTTCCTCCTCCCCTGAAA+AGG | + | chr1.2:12942337-12942356 | None:intergenic | 55.0% | |
AGTCCCAACAGCTGGAGAAC+GGG | + | chr1.2:12941473-12941492 | None:intergenic | 55.0% | |
ATCCTGCCAACTTTGCTCCC+TGG | + | chr1.2:12939819-12939838 | None:intergenic | 55.0% | |
ATTAGCAGTCCTCCCCCACA+AGG | + | chr1.2:12938212-12938231 | None:intergenic | 55.0% | |
CAATACTGGAGCCAGCTTCG+TGG | - | chr1.2:12942168-12942187 | MS.gene33879:intron | 55.0% | |
CAATGGGGCAGGTGAAGGAA+AGG | - | chr1.2:12941307-12941326 | MS.gene33879:intron | 55.0% | |
CCGAAAAGGGCCAGGAAACT+GGG | - | chr1.2:12941342-12941361 | MS.gene33879:intron | 55.0% | |
CCTGACCCTAGTCAGCCAAA+GGG | + | chr1.2:12938344-12938363 | None:intergenic | 55.0% | |
CCTTTGGCTGACTAGGGTCA+GGG | - | chr1.2:12938342-12938361 | MS.gene33879:CDS | 55.0% | |
CGTGCTTTCTGAGCAGCTTC+AGG | + | chr1.2:12941816-12941835 | None:intergenic | 55.0% | |
CTGCAGCCCTTTCGGAAAAG+GGG | - | chr1.2:12941841-12941860 | MS.gene33879:intron | 55.0% | |
GAATGTGGGTTCCAACCACG+AGG | - | chr1.2:12940904-12940923 | MS.gene33879:intron | 55.0% | |
GCTGCAGCCCTTTCGGAAAA+GGG | - | chr1.2:12941840-12941859 | MS.gene33879:intron | 55.0% | |
GGAGGCTGAAGGCGAAGAAA+AGG | - | chr1.2:12941220-12941239 | MS.gene33879:intron | 55.0% | |
TGCAGCCCTTTCGGAAAAGG+GGG | - | chr1.2:12941842-12941861 | MS.gene33879:intron | 55.0% | |
TGCGTCCCTTTGGCTGACTA+GGG | - | chr1.2:12938336-12938355 | MS.gene33879:CDS | 55.0% | |
TGCTGCAGCCCTTTCGGAAA+AGG | - | chr1.2:12941839-12941858 | MS.gene33879:intron | 55.0% | |
TGGTAAGCGGCTGACCTTGT+GGG | - | chr1.2:12938195-12938214 | MS.gene33879:CDS | 55.0% | |
TTCAGGGGAGGAGGAAGGTA+TGG | - | chr1.2:12942338-12942357 | MS.gene33879:intron | 55.0% | |
TTCCAGGGAGCAAAGTTGGC+AGG | - | chr1.2:12939814-12939833 | MS.gene33879:intron | 55.0% | |
TTGCGTCCCTTTGGCTGACT+AGG | - | chr1.2:12938335-12938354 | MS.gene33879:CDS | 55.0% | |
TTGGTAAGCGGCTGACCTTG+TGG | - | chr1.2:12938194-12938213 | MS.gene33879:CDS | 55.0% | |
! | AAGTTGGCTCATACCCCGCA+AGG | + | chr1.2:12938634-12938653 | None:intergenic | 55.0% |
! | AGTTGGCTCATACCCCGCAA+GGG | + | chr1.2:12938633-12938652 | None:intergenic | 55.0% |
! | CCCAGTTTCCTGGCCCTTTT+CGG | + | chr1.2:12941345-12941364 | None:intergenic | 55.0% |
! | CTAAGCCCCCCTTTTCCGAA+AGG | + | chr1.2:12941851-12941870 | None:intergenic | 55.0% |
! | GGAGGAAGGTATGGTAGAGG+AGG | - | chr1.2:12942347-12942366 | MS.gene33879:intron | 55.0% |
! | GGAGGAGGAAGGTATGGTAG+AGG | - | chr1.2:12942344-12942363 | MS.gene33879:intron | 55.0% |
!! | ACCCTCTGAAGTTGCTGCTG+AGG | - | chr1.2:12941130-12941149 | MS.gene33879:intron | 55.0% |
!! | ACCTTTTCAGGGGAGGAGGA+AGG | - | chr1.2:12942333-12942352 | MS.gene33879:intron | 55.0% |
!! | GGTGACTGAAGGTGCCGAAA+AGG | - | chr1.2:12941328-12941347 | MS.gene33879:intron | 55.0% |
!! | TGCGTGCCACTTACCTTCCT+CGG | + | chr1.2:12942227-12942246 | None:intergenic | 55.0% |
!!! | CCGCGGTACTCCACTTTTTC+TGG | - | chr1.2:12937535-12937554 | MS.gene33879:intron | 55.0% |
CCCTGACCCTAGTCAGCCAA+AGG | + | chr1.2:12938345-12938364 | None:intergenic | 60.0% | |
CCCTTTGGCTGACTAGGGTC+AGG | - | chr1.2:12938341-12938360 | MS.gene33879:CDS | 60.0% | |
GCAGCCCTTTCGGAAAAGGG+GGG | - | chr1.2:12941843-12941862 | MS.gene33879:intron | 60.0% | |
GCCGAAAAGGGCCAGGAAAC+TGG | - | chr1.2:12941341-12941360 | MS.gene33879:intron | 60.0% | |
GGTAAGCGGCTGACCTTGTG+GGG | - | chr1.2:12938196-12938215 | MS.gene33879:CDS | 60.0% | |
GTAAGCGGCTGACCTTGTGG+GGG | - | chr1.2:12938197-12938216 | MS.gene33879:CDS | 60.0% | |
GTTCGGTTGCCCCGTCATGT+TGG | - | chr1.2:12940334-12940353 | MS.gene33879:intron | 60.0% | |
TAGGGTCAGGGTAGGCCTCA+AGG | - | chr1.2:12938354-12938373 | MS.gene33879:CDS | 60.0% | |
TCAGCGCTCTGTGAGCCTTG+AGG | + | chr1.2:12938372-12938391 | None:intergenic | 60.0% | |
TGGCTGACTAGGGTCAGGGT+AGG | - | chr1.2:12938346-12938365 | MS.gene33879:CDS | 60.0% | |
TGGGGCCACTGTGCTACCAA+AGG | - | chr1.2:12938687-12938706 | MS.gene33879:CDS | 60.0% | |
TGTGGGTTCCAACCACGAGG+AGG | - | chr1.2:12940907-12940926 | MS.gene33879:intron | 60.0% | |
! | ACGTGCTGCTGCAGCCCTTT+CGG | - | chr1.2:12941833-12941852 | MS.gene33879:intron | 60.0% |
! | TGGGGCCTTTGGTAGCACAG+TGG | + | chr1.2:12938695-12938714 | None:intergenic | 60.0% |
!! | AAGTGGAGTACCGCGGTACC+AGG | + | chr1.2:12937531-12937550 | None:intergenic | 60.0% |
!! | TGAAGGTGCCGAAAAGGGCC+AGG | - | chr1.2:12941334-12941353 | MS.gene33879:intron | 60.0% |
CAGGTACGTGCCTGGTACCG+CGG | - | chr1.2:12937518-12937537 | MS.gene33879:intron | 65.0% | |
!! | TGTGAAGTACCGGCGGTGCC+AGG | - | chr1.2:12937499-12937518 | MS.gene33879:intron | 65.0% |
AGCGGCTGACCTTGTGGGGG+AGG | - | chr1.2:12938200-12938219 | MS.gene33879:CDS | 70.0% | |
AGGCACGTACCTGGCACCGC+CGG | + | chr1.2:12937511-12937530 | None:intergenic | 70.0% | |
CGCGGTACCAGGCACGTACC+TGG | + | chr1.2:12937520-12937539 | None:intergenic | 70.0% | |
! | GGCGGTGCCAGGTACGTGCC+TGG | - | chr1.2:12937510-12937529 | MS.gene33879:intron | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.2 | gene | 12937122 | 12942436 | 12937122 | ID=MS.gene33879 |
chr1.2 | mRNA | 12937122 | 12942436 | 12937122 | ID=MS.gene33879.t1;Parent=MS.gene33879 |
chr1.2 | exon | 12942386 | 12942436 | 12942386 | ID=MS.gene33879.t1.exon1;Parent=MS.gene33879.t1 |
chr1.2 | CDS | 12942386 | 12942436 | 12942386 | ID=cds.MS.gene33879.t1;Parent=MS.gene33879.t1 |
chr1.2 | exon | 12942223 | 12942301 | 12942223 | ID=MS.gene33879.t1.exon2;Parent=MS.gene33879.t1 |
chr1.2 | CDS | 12942223 | 12942301 | 12942223 | ID=cds.MS.gene33879.t1;Parent=MS.gene33879.t1 |
chr1.2 | exon | 12940565 | 12940717 | 12940565 | ID=MS.gene33879.t1.exon3;Parent=MS.gene33879.t1 |
chr1.2 | CDS | 12940565 | 12940717 | 12940565 | ID=cds.MS.gene33879.t1;Parent=MS.gene33879.t1 |
chr1.2 | exon | 12939596 | 12939738 | 12939596 | ID=MS.gene33879.t1.exon4;Parent=MS.gene33879.t1 |
chr1.2 | CDS | 12939596 | 12939738 | 12939596 | ID=cds.MS.gene33879.t1;Parent=MS.gene33879.t1 |
chr1.2 | exon | 12939085 | 12939233 | 12939085 | ID=MS.gene33879.t1.exon5;Parent=MS.gene33879.t1 |
chr1.2 | CDS | 12939085 | 12939233 | 12939085 | ID=cds.MS.gene33879.t1;Parent=MS.gene33879.t1 |
chr1.2 | exon | 12938607 | 12938711 | 12938607 | ID=MS.gene33879.t1.exon6;Parent=MS.gene33879.t1 |
chr1.2 | CDS | 12938607 | 12938711 | 12938607 | ID=cds.MS.gene33879.t1;Parent=MS.gene33879.t1 |
chr1.2 | exon | 12938104 | 12938524 | 12938104 | ID=MS.gene33879.t1.exon7;Parent=MS.gene33879.t1 |
chr1.2 | CDS | 12938104 | 12938524 | 12938104 | ID=cds.MS.gene33879.t1;Parent=MS.gene33879.t1 |
chr1.2 | exon | 12937649 | 12937796 | 12937649 | ID=MS.gene33879.t1.exon8;Parent=MS.gene33879.t1 |
chr1.2 | CDS | 12937649 | 12937796 | 12937649 | ID=cds.MS.gene33879.t1;Parent=MS.gene33879.t1 |
chr1.2 | exon | 12937326 | 12937404 | 12937326 | ID=MS.gene33879.t1.exon9;Parent=MS.gene33879.t1 |
chr1.2 | CDS | 12937326 | 12937404 | 12937326 | ID=cds.MS.gene33879.t1;Parent=MS.gene33879.t1 |
chr1.2 | exon | 12937122 | 12937215 | 12937122 | ID=MS.gene33879.t1.exon10;Parent=MS.gene33879.t1 |
chr1.2 | CDS | 12937122 | 12937215 | 12937122 | ID=cds.MS.gene33879.t1;Parent=MS.gene33879.t1 |
Gene Sequence |
Protein sequence |