Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35157.t1 | XP_003608503.1 | 78.3 | 682 | 91 | 3 | 64 | 697 | 65 | 737 | 1.60E-202 | 716.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35157.t1 | O74828 | 28.6 | 549 | 311 | 11 | 163 | 674 | 178 | 682 | 3.9e-40 | 167.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35157.t1 | G7JDZ9 | 78.3 | 682 | 91 | 3 | 64 | 697 | 65 | 737 | 1.2e-202 | 716.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049825 | MS.gene35157 | 0.80473 | 1.88E-49 | -1.69E-46 |
| MS.gene049873 | MS.gene35157 | 0.800992 | 1.11E-48 | -1.69E-46 |
| MS.gene051700 | MS.gene35157 | 0.823989 | 1.03E-53 | -1.69E-46 |
| MS.gene05188 | MS.gene35157 | 0.8168 | 4.59E-52 | -1.69E-46 |
| MS.gene052582 | MS.gene35157 | 0.809272 | 2.05E-50 | -1.69E-46 |
| MS.gene052584 | MS.gene35157 | 0.809537 | 1.80E-50 | -1.69E-46 |
| MS.gene053122 | MS.gene35157 | 0.847499 | 1.11E-59 | -1.69E-46 |
| MS.gene053226 | MS.gene35157 | 0.840924 | 6.48E-58 | -1.69E-46 |
| MS.gene056403 | MS.gene35157 | 0.835937 | 1.25E-56 | -1.69E-46 |
| MS.gene056605 | MS.gene35157 | 0.824676 | 7.10E-54 | -1.69E-46 |
| MS.gene05689 | MS.gene35157 | 0.842283 | 2.84E-58 | -1.69E-46 |
| MS.gene059935 | MS.gene35157 | 0.847475 | 1.13E-59 | -1.69E-46 |
| MS.gene060365 | MS.gene35157 | 0.80973 | 1.64E-50 | -1.69E-46 |
| MS.gene060429 | MS.gene35157 | 0.811503 | 6.78E-51 | -1.69E-46 |
| MS.gene060763 | MS.gene35157 | 0.805991 | 1.02E-49 | -1.69E-46 |
| MS.gene060830 | MS.gene35157 | 0.816288 | 5.98E-52 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35157.t1 | MTR_4g096820 | 85.255 | 746 | 52 | 6 | 1 | 697 | 1 | 737 | 0.0 | 1047 |
| MS.gene35157.t1 | MTR_4g073330 | 50.511 | 685 | 250 | 24 | 46 | 697 | 24 | 652 | 0.0 | 530 |
| MS.gene35157.t1 | MTR_3g107350 | 49.508 | 305 | 91 | 14 | 398 | 693 | 2 | 252 | 9.11e-54 | 186 |
| MS.gene35157.t1 | MTR_3g107330 | 60.377 | 106 | 39 | 2 | 258 | 363 | 55 | 157 | 2.61e-35 | 133 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35157.t1 | AT3G01160 | 46.695 | 711 | 262 | 20 | 47 | 688 | 29 | 691 | 8.95e-159 | 475 |
Find 143 sgRNAs with CRISPR-Local
Find 259 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCTCCCTTTGTTGTCTTCA+TGG | 0.144808 | 4.4:-19308221 | None:intergenic |
| CAACCTTTGTTTGATGCTTT+GGG | 0.195202 | 4.4:-19308389 | None:intergenic |
| TTCTTCTTCTTCTTAATATC+AGG | 0.236398 | 4.4:-19311251 | None:intergenic |
| GAAATCAAAGCAAGATAAAT+TGG | 0.239661 | 4.4:+19312098 | MS.gene35157:CDS |
| GCAACCTTTGTTTGATGCTT+TGG | 0.249472 | 4.4:-19308390 | None:intergenic |
| CTGCTTCTGTGCCAGCTGCC+TGG | 0.262136 | 4.4:-19311953 | None:intergenic |
| AGATATAAGCAGACATATTA+TGG | 0.262351 | 4.4:+19311049 | MS.gene35157:CDS |
| TAAATTGGAGTTATCATCTT+TGG | 0.267442 | 4.4:+19312113 | MS.gene35157:CDS |
| CCACCGATCCACAATTTAAA+AGG | 0.293286 | 4.4:+19311549 | MS.gene35157:CDS |
| ACTATTTATCCAACCGAGTT+TGG | 0.299625 | 4.4:+19309284 | MS.gene35157:CDS |
| TAGGCTGGCTGTTGTTAATA+TGG | 0.299951 | 4.4:+19309077 | MS.gene35157:CDS |
| ATAAACCATACCTGAATTTC+AGG | 0.314324 | 4.4:-19308786 | None:intergenic |
| ATGAATGAGGAGGAAGTTAA+AGG | 0.319405 | 4.4:+19309317 | MS.gene35157:CDS |
| GAAGACAATTGTGTTTCTTT+CGG | 0.328663 | 4.4:-19312024 | None:intergenic |
| CATCGAATCCACTTGACTTA+AGG | 0.335239 | 4.4:+19310160 | MS.gene35157:CDS |
| TCTTTGTTCTCGTAGTTTGC+AGG | 0.342246 | 4.4:-19310318 | None:intergenic |
| TTTATCAGACTTCTTCGAAT+TGG | 0.348671 | 4.4:-19308286 | None:intergenic |
| GAGCTCTTCTTTGCTTGCTT+TGG | 0.365529 | 4.4:-19311333 | None:intergenic |
| TGGCTACCCCATCCATATCT+TGG | 0.367484 | 4.4:-19311313 | None:intergenic |
| AAGGAGAAGGGTGGGGAAGA+AGG | 0.368948 | 4.4:+19312063 | MS.gene35157:CDS |
| GCGAAACCGGAGATTGATAA+TGG | 0.375886 | 4.4:+19308645 | MS.gene35157:CDS |
| AGATCATAAGCTCCAAGATA+TGG | 0.384646 | 4.4:+19311301 | MS.gene35157:CDS |
| GGATCATCAAATGCATTGTT+TGG | 0.388107 | 4.4:-19311485 | None:intergenic |
| AGATGATGATGCCATGGATA+TGG | 0.388730 | 4.4:+19311001 | MS.gene35157:CDS |
| ACAGTAAAGTTGAACTTACT+TGG | 0.391491 | 4.4:+19310364 | MS.gene35157:CDS |
| AGAGGATGAACCTGAAATTC+AGG | 0.394746 | 4.4:+19308776 | MS.gene35157:CDS |
| AAGGTTTATTCCAGACGATA+TGG | 0.401282 | 4.4:+19310179 | MS.gene35157:CDS |
| ATCTTGCAAACCTGTATTGA+AGG | 0.406255 | 4.4:-19311030 | None:intergenic |
| CGCCGTGTATGCCAGGCAGC+TGG | 0.411298 | 4.4:+19311942 | MS.gene35157:CDS |
| AGGAGAAGGGTGGGGAAGAA+GGG | 0.411300 | 4.4:+19312064 | MS.gene35157:CDS |
| TCACCATCAAATAGAGCAAC+AGG | 0.414563 | 4.4:-19309341 | None:intergenic |
| CCTCCTCATTCATACGTTGA+AGG | 0.416581 | 4.4:-19309307 | None:intergenic |
| GGGCCTGTTGCTCTATTTGA+TGG | 0.419143 | 4.4:+19309338 | MS.gene35157:CDS |
| CAACACGATGGGATCCAAAA+AGG | 0.419222 | 4.4:+19308185 | None:intergenic |
| CAATTGTCTTCTGATGGTTC+TGG | 0.419907 | 4.4:+19312036 | MS.gene35157:CDS |
| AGTTCATTAGCCCCACCTAA+TGG | 0.423520 | 4.4:+19309245 | MS.gene35157:CDS |
| ACCGATTTGACCAGTCCATT+AGG | 0.435915 | 4.4:-19309260 | None:intergenic |
| GTCTGAAGAGAGCGGTGATT+CGG | 0.446713 | 4.4:+19308674 | MS.gene35157:CDS |
| CAGACATATTATGGAAAAGA+AGG | 0.449002 | 4.4:+19311058 | MS.gene35157:CDS |
| ACCTCTGATGCAACATCCTT+AGG | 0.449293 | 4.4:-19310216 | None:intergenic |
| GCAGGAGCGCCGTGTATGCC+AGG | 0.451654 | 4.4:+19311935 | MS.gene35157:intron |
| GAAAATCACAATTTAAGAAA+AGG | 0.454669 | 4.4:+19312202 | MS.gene35157:CDS |
| GAAAGTTAAGAATGCGAAAC+CGG | 0.457632 | 4.4:+19308632 | MS.gene35157:CDS |
| ACCTAATGGACTGGTCAAAT+CGG | 0.462020 | 4.4:+19309259 | MS.gene35157:CDS |
| GATGACAAGGGGACAGGTAC+TGG | 0.470311 | 4.4:+19311371 | MS.gene35157:CDS |
| TCAGTTCCATTATCAATCTC+CGG | 0.476957 | 4.4:-19308651 | None:intergenic |
| GATGTCAATGCAAAGAAAGC+TGG | 0.479316 | 4.4:+19312180 | MS.gene35157:CDS |
| GTGAAGAATTATCAGTAGAA+AGG | 0.480256 | 4.4:+19311986 | MS.gene35157:CDS |
| AACCTTTGTTTGATGCTTTG+GGG | 0.480610 | 4.4:-19308388 | None:intergenic |
| GAACAAAGATTTCTATTCTC+GGG | 0.481122 | 4.4:+19310332 | MS.gene35157:CDS |
| AGAACAAAGATTTCTATTCT+CGG | 0.483286 | 4.4:+19310331 | MS.gene35157:CDS |
| GGTTTACCTCGCTTATCGAC+AGG | 0.486823 | 4.4:-19308471 | None:intergenic |
| CTGGTATGAAGGAGAAGGGT+GGG | 0.492784 | 4.4:+19312055 | MS.gene35157:CDS |
| AGAACCATGAAGACAACAAA+GGG | 0.495110 | 4.4:+19308217 | MS.gene35157:CDS |
| TTCTGATGGTTCTGGTATGA+AGG | 0.495916 | 4.4:+19312044 | MS.gene35157:CDS |
| ATGGAGGTGACCTTCAATAC+AGG | 0.496342 | 4.4:+19311020 | MS.gene35157:CDS |
| GCTGGCACAGAAGCAGCAGA+AGG | 0.499989 | 4.4:+19311960 | MS.gene35157:CDS |
| GAAGAACAATGGCAAGGGTA+AGG | 0.500977 | 4.4:+19308254 | MS.gene35157:CDS |
| TGCCAGCTGCCTGGCATACA+CGG | 0.501362 | 4.4:-19311944 | None:intergenic |
| ATAGCTGGCTCAGTTGGAAA+TGG | 0.501819 | 4.4:+19310851 | MS.gene35157:intron |
| ATTGTGATAGCTGGCTCAGT+TGG | 0.502360 | 4.4:+19310845 | MS.gene35157:intron |
| TGTTTGAATTCCATATCGTC+TGG | 0.504264 | 4.4:-19310189 | None:intergenic |
| GAAACACAATTGTCTTCTGA+TGG | 0.505036 | 4.4:+19312030 | MS.gene35157:CDS |
| TGAAGAATTATCAGTAGAAA+GGG | 0.505273 | 4.4:+19311987 | MS.gene35157:CDS |
| TGAATGAGGAGGAAGTTAAA+GGG | 0.505616 | 4.4:+19309318 | MS.gene35157:CDS |
| GAGCGGTGATTCGGAACCTA+TGG | 0.507699 | 4.4:+19308683 | MS.gene35157:CDS |
| GGGGACAGGTACTGGTCTCA+AGG | 0.508304 | 4.4:+19311379 | MS.gene35157:CDS |
| TTATCTGTATCTGAATCCAT+AGG | 0.508775 | 4.4:-19308699 | None:intergenic |
| GCGGAAATTCACTGACGAGC+AGG | 0.510238 | 4.4:+19310422 | MS.gene35157:CDS |
| CATTGACATCAGAGGATAGG+TGG | 0.514811 | 4.4:-19312167 | None:intergenic |
| GACAATAATTCAGATGAAGA+TGG | 0.518699 | 4.4:+19310978 | MS.gene35157:CDS |
| TTGCATTGACATCAGAGGAT+AGG | 0.521761 | 4.4:-19312170 | None:intergenic |
| AAGTGATGAAGACGATAGTG+AGG | 0.522461 | 4.4:+19309373 | MS.gene35157:CDS |
| ATCTGAATTATTGTCAAGCA+AGG | 0.527250 | 4.4:-19310970 | None:intergenic |
| TGCGTGCATATGAAAAGAGC+AGG | 0.528143 | 4.4:+19309450 | MS.gene35157:CDS |
| GGAATAAACCTTAAGTCAAG+TGG | 0.531217 | 4.4:-19310168 | None:intergenic |
| CACATTTACAAAGAAAATGA+TGG | 0.532366 | 4.4:+19310120 | MS.gene35157:CDS |
| AGATTGAGAAAGAAACTCAT+AGG | 0.533078 | 4.4:+19309058 | MS.gene35157:CDS |
| TTTGTAAATGTGATCTGCTG+TGG | 0.536863 | 4.4:-19310109 | None:intergenic |
| TCCTAAGGATGTTGCATCAG+AGG | 0.537358 | 4.4:+19310215 | MS.gene35157:CDS |
| AGTTGAACTTACTTGGGATG+AGG | 0.538968 | 4.4:+19310371 | MS.gene35157:CDS |
| CTTGCTGATGACAAGGGGAC+AGG | 0.541409 | 4.4:+19311365 | MS.gene35157:CDS |
| CGTTGAAGGCCAAACTCGGT+TGG | 0.544452 | 4.4:-19309293 | None:intergenic |
| TTCGAGCAAATACTTTGAAG+CGG | 0.548379 | 4.4:+19310403 | MS.gene35157:CDS |
| CTTATCGACAGGCGCAGAAG+AGG | 0.549347 | 4.4:-19308460 | None:intergenic |
| ATAAGCTCCAAGATATGGAT+GGG | 0.550287 | 4.4:+19311306 | MS.gene35157:CDS |
| GGAATTCAAACAGCCTCCTA+AGG | 0.550469 | 4.4:+19310200 | MS.gene35157:CDS |
| GAGTGATAGTGATGATAGTA+AGG | 0.550835 | 4.4:+19310896 | MS.gene35157:CDS |
| CATAAGCTCCAAGATATGGA+TGG | 0.551085 | 4.4:+19311305 | MS.gene35157:CDS |
| TTCAAAGTATTTGCTCGAAG+AGG | 0.553042 | 4.4:-19310399 | None:intergenic |
| TGAAGATCCTCGATTTGCAA+TGG | 0.554302 | 4.4:+19308338 | MS.gene35157:CDS |
| TGGCCTTCAACGTATGAATG+AGG | 0.554948 | 4.4:+19309304 | MS.gene35157:CDS |
| GCGGAGAATGCTATTGATGA+GGG | 0.557091 | 4.4:+19311455 | MS.gene35157:CDS |
| TGGTATGAAGGAGAAGGGTG+GGG | 0.563117 | 4.4:+19312056 | MS.gene35157:CDS |
| CAGTAAAGTTGAACTTACTT+GGG | 0.565191 | 4.4:+19310365 | MS.gene35157:CDS |
| ATTTGACCAGTCCATTAGGT+GGG | 0.566867 | 4.4:-19309256 | None:intergenic |
| CTGGCACAGAAGCAGCAGAA+GGG | 0.567081 | 4.4:+19311961 | MS.gene35157:CDS |
| TGGCTGTTGTTAATATGGAC+TGG | 0.567725 | 4.4:+19309082 | MS.gene35157:CDS |
| TGAGAAAGAAACTCATAGGC+TGG | 0.567983 | 4.4:+19309062 | MS.gene35157:CDS |
| ACCTTTGTTTGATGCTTTGG+GGG | 0.568217 | 4.4:-19308387 | None:intergenic |
| GGGACAGGTACTGGTCTCAA+GGG | 0.570096 | 4.4:+19311380 | MS.gene35157:CDS |
| ATCACGAAAATCTTCTTCAT+CGG | 0.572256 | 4.4:-19309405 | None:intergenic |
| TTTCTTTGCATTGACATCAG+AGG | 0.575565 | 4.4:-19312175 | None:intergenic |
| CATACGTTGAAGGCCAAACT+CGG | 0.576188 | 4.4:-19309297 | None:intergenic |
| GGTTCTGGTATGAAGGAGAA+GGG | 0.577877 | 4.4:+19312051 | MS.gene35157:CDS |
| ATTAGCCCCACCTAATGGAC+TGG | 0.582985 | 4.4:+19309250 | MS.gene35157:CDS |
| TTATCGACAGGCGCAGAAGA+GGG | 0.586373 | 4.4:-19308459 | None:intergenic |
| GGCGGAGAATGCTATTGATG+AGG | 0.588252 | 4.4:+19311454 | MS.gene35157:CDS |
| ATCACACAGTAATGACAAAG+AGG | 0.589086 | 4.4:+19308311 | MS.gene35157:CDS |
| GAAGATGAAGAACAATGGCA+AGG | 0.589574 | 4.4:+19308248 | MS.gene35157:CDS |
| TCTGGTATGAAGGAGAAGGG+TGG | 0.592849 | 4.4:+19312054 | MS.gene35157:CDS |
| GAAGGTCACCTCCATATCCA+TGG | 0.597313 | 4.4:-19311012 | None:intergenic |
| GATTTGACCAGTCCATTAGG+TGG | 0.602078 | 4.4:-19309257 | None:intergenic |
| ACTGTTGCTTGCTGATGACA+AGG | 0.603264 | 4.4:+19311358 | MS.gene35157:CDS |
| GGGTTCACGAAAACGTGGGT+CGG | 0.604229 | 4.4:-19308367 | None:intergenic |
| TTTGACCAGTCCATTAGGTG+GGG | 0.605201 | 4.4:-19309255 | None:intergenic |
| AACTCTTGTCAGTGAACATG+CGG | 0.607142 | 4.4:-19308431 | None:intergenic |
| TCTGATGCAACATCCTTAGG+AGG | 0.610046 | 4.4:-19310213 | None:intergenic |
| AAGATGAAGAACAATGGCAA+GGG | 0.611817 | 4.4:+19308249 | MS.gene35157:CDS |
| AAGAAGAAGATGAAGAACAA+TGG | 0.612629 | 4.4:+19308243 | MS.gene35157:CDS |
| AAGAACCATGAAGACAACAA+AGG | 0.612963 | 4.4:+19308216 | MS.gene35157:CDS |
| CATATGAAAAGAGCAGGATG+AGG | 0.614560 | 4.4:+19309456 | MS.gene35157:CDS |
| AGATGACTTCTTCATTGATG+AGG | 0.615496 | 4.4:+19311226 | MS.gene35157:CDS |
| TGGTTCTGGTATGAAGGAGA+AGG | 0.619698 | 4.4:+19312050 | MS.gene35157:CDS |
| ATTGATACAGATACTGATGA+TGG | 0.620797 | 4.4:+19308732 | MS.gene35157:CDS |
| ATTTAAGAAAAGGAAGCACT+AGG | 0.633678 | 4.4:+19312212 | MS.gene35157:CDS |
| AGATGGAGATGATGATGCCA+TGG | 0.633714 | 4.4:+19310995 | MS.gene35157:CDS |
| TGATGAGAACGATTCTGAAG+AGG | 0.644883 | 4.4:+19308758 | MS.gene35157:CDS |
| ACCATGAAGACAACAAAGGG+AGG | 0.648107 | 4.4:+19308220 | MS.gene35157:CDS |
| TGTTGCTTGCTGATGACAAG+GGG | 0.651064 | 4.4:+19311360 | MS.gene35157:CDS |
| CAGTTTGGGAAGAATATCTG+AGG | 0.657281 | 4.4:+19311096 | MS.gene35157:CDS |
| GTGTGAACCATTGCAAATCG+AGG | 0.657453 | 4.4:-19308345 | None:intergenic |
| TCTGCGCCTGTCGATAAGCG+AGG | 0.658973 | 4.4:+19308465 | MS.gene35157:CDS |
| TAAGCTCCAAGATATGGATG+GGG | 0.662936 | 4.4:+19311307 | MS.gene35157:CDS |
| CCTTCAACGTATGAATGAGG+AGG | 0.665822 | 4.4:+19309307 | MS.gene35157:CDS |
| CGGAGAATGCTATTGATGAG+GGG | 0.677097 | 4.4:+19311456 | MS.gene35157:CDS |
| CTGTTGCTTGCTGATGACAA+GGG | 0.682674 | 4.4:+19311359 | MS.gene35157:CDS |
| TGATGATGCCATGGATATGG+AGG | 0.684743 | 4.4:+19311004 | MS.gene35157:CDS |
| TATGGACTGGCGGTATGTGA+AGG | 0.687556 | 4.4:+19309095 | MS.gene35157:CDS |
| GGAACTGAGTCTGAAGAGAG+CGG | 0.689169 | 4.4:+19308666 | MS.gene35157:CDS |
| CTGTTGTTAATATGGACTGG+CGG | 0.700073 | 4.4:+19309085 | MS.gene35157:CDS |
| GAGAAGATAGATGCAAAACG+TGG | 0.707824 | 4.4:-19311506 | None:intergenic |
| ATAACAATGAGACTGATGAG+CGG | 0.754373 | 4.4:+19310919 | MS.gene35157:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTCTTATTATTAGTAATATT+AGG | + | chr4.4:19308877-19308896 | MS.gene35157:intron | 10.0% |
| !!! | AAATATTGAAAATTATTTCT+TGG | + | chr4.4:19311691-19311710 | MS.gene35157:intron | 10.0% |
| !!! | ACAAAAATTAAATTTTAGAA+AGG | - | chr4.4:19311910-19311929 | None:intergenic | 10.0% |
| !!! | GTAAAATAATTTTAATTGAT+CGG | + | chr4.4:19308924-19308943 | MS.gene35157:intron | 10.0% |
| !!! | TAAATGACATAATTTTAAAA+TGG | - | chr4.4:19308852-19308871 | None:intergenic | 10.0% |
| !! | AAATGACTAAATAAAAAATG+AGG | - | chr4.4:19310544-19310563 | None:intergenic | 15.0% |
| !! | TTAGTAATATTAGGATTTAA+AGG | + | chr4.4:19308886-19308905 | MS.gene35157:intron | 15.0% |
| !! | TTATAAATGTGAATACTATT+TGG | - | chr4.4:19310567-19310586 | None:intergenic | 15.0% |
| !!! | ATAAAATACCTTTTAAATTG+TGG | - | chr4.4:19311560-19311579 | None:intergenic | 15.0% |
| !!! | TACTTATTATCTTTTTTTCT+AGG | - | chr4.4:19310945-19310964 | None:intergenic | 15.0% |
| !!! | TATAATCTGAAGTTTAAAAA+AGG | + | chr4.4:19311404-19311423 | MS.gene35157:CDS | 15.0% |
| !! | ATAAAAAATCAAGAACAGTT+TGG | + | chr4.4:19311081-19311100 | MS.gene35157:CDS | 20.0% |
| !! | GAAAATCACAATTTAAGAAA+AGG | + | chr4.4:19312202-19312221 | MS.gene35157:CDS | 20.0% |
| !! | TAAAAAATCAAGAACAGTTT+GGG | + | chr4.4:19311082-19311101 | MS.gene35157:CDS | 20.0% |
| !! | TGATATAATGAATGGTTAAA+GGG | - | chr4.4:19309634-19309653 | None:intergenic | 20.0% |
| !! | TTAAACCTTGATATAATGAA+TGG | - | chr4.4:19309642-19309661 | None:intergenic | 20.0% |
| !! | TTGATATAATGAATGGTTAA+AGG | - | chr4.4:19309635-19309654 | None:intergenic | 20.0% |
| !! | TTTAACCATTCATTATATCA+AGG | + | chr4.4:19309634-19309653 | MS.gene35157:intron | 20.0% |
| !!! | AATAATTTTAATTGATCGGT+TGG | + | chr4.4:19308928-19308947 | MS.gene35157:intron | 20.0% |
| !!! | ATTTAATTTTTGTTGATTGC+AGG | + | chr4.4:19311917-19311936 | MS.gene35157:intron | 20.0% |
| !!! | GATTTAGCTAAGAAATTTTT+TGG | - | chr4.4:19311741-19311760 | None:intergenic | 20.0% |
| !!! | GTGTTGATAAATTTATATCT+TGG | + | chr4.4:19310475-19310494 | MS.gene35157:intron | 20.0% |
| !!! | TATGGTTTATGCATTTTATT+TGG | + | chr4.4:19308799-19308818 | MS.gene35157:intron | 20.0% |
| ! | AATAATACTCAGAGTTTAAC+AGG | - | chr4.4:19309012-19309031 | None:intergenic | 25.0% |
| ! | ACATCTGTACTAGTTATTAA+GGG | - | chr4.4:19310685-19310704 | None:intergenic | 25.0% |
| ! | AGAAAAAAAACTTAAAGCTC+TGG | - | chr4.4:19310815-19310834 | None:intergenic | 25.0% |
| ! | AGAACAAAGATTTCTATTCT+CGG | + | chr4.4:19310331-19310350 | MS.gene35157:CDS | 25.0% |
| ! | AGAGTTTACTACATGAAAAT+AGG | - | chr4.4:19311879-19311898 | None:intergenic | 25.0% |
| ! | AGATATAAGCAGACATATTA+TGG | + | chr4.4:19311049-19311068 | MS.gene35157:CDS | 25.0% |
| ! | AGTATTATTATGATATGGAC+AGG | + | chr4.4:19309023-19309042 | MS.gene35157:intron | 25.0% |
| ! | CACATTTACAAAGAAAATGA+TGG | + | chr4.4:19310120-19310139 | MS.gene35157:CDS | 25.0% |
| ! | CTCTGAGTATTATTATGATA+TGG | + | chr4.4:19309018-19309037 | MS.gene35157:intron | 25.0% |
| ! | GAAAAAAAACTTAAAGCTCT+GGG | - | chr4.4:19310814-19310833 | None:intergenic | 25.0% |
| ! | GAAATCAAAGCAAGATAAAT+TGG | + | chr4.4:19312098-19312117 | MS.gene35157:CDS | 25.0% |
| ! | GAGTTAGACAAGATAATATT+GGG | - | chr4.4:19311769-19311788 | None:intergenic | 25.0% |
| ! | TAAATTGGAGTTATCATCTT+TGG | + | chr4.4:19312113-19312132 | MS.gene35157:CDS | 25.0% |
| ! | TAACAAAAAAAGACAAGTAC+AGG | - | chr4.4:19310710-19310729 | None:intergenic | 25.0% |
| ! | TACATCTGTACTAGTTATTA+AGG | - | chr4.4:19310686-19310705 | None:intergenic | 25.0% |
| ! | TATACAAGTTTCTTGAATAG+CGG | - | chr4.4:19311854-19311873 | None:intergenic | 25.0% |
| ! | TATATATATATGCTGTATCG+TGG | + | chr4.4:19310249-19310268 | MS.gene35157:intron | 25.0% |
| ! | TCTTCGTCATTACTATAAAA+TGG | + | chr4.4:19308524-19308543 | MS.gene35157:intron | 25.0% |
| ! | TGAAGAATTATCAGTAGAAA+GGG | + | chr4.4:19311987-19312006 | MS.gene35157:CDS | 25.0% |
| ! | TGAGTTAGACAAGATAATAT+TGG | - | chr4.4:19311770-19311789 | None:intergenic | 25.0% |
| ! | TTAATTGTTATGTATCTGTG+TGG | + | chr4.4:19310727-19310746 | MS.gene35157:intron | 25.0% |
| ! | TTCTTCTTCTTCTTAATATC+AGG | - | chr4.4:19311254-19311273 | None:intergenic | 25.0% |
| ! | TTGTGATATATTTGCTTGAA+TGG | + | chr4.4:19309504-19309523 | MS.gene35157:intron | 25.0% |
| !! | AAAATTATTTCTTGGCATGA+TGG | + | chr4.4:19311699-19311718 | MS.gene35157:intron | 25.0% |
| !! | AAACACAATTGACTTACATT+AGG | - | chr4.4:19309134-19309153 | None:intergenic | 25.0% |
| !! | AGATTCAAGTTAGAAAAACA+TGG | - | chr4.4:19310038-19310057 | None:intergenic | 25.0% |
| !! | ATACCTTTTAAATTGTGGAT+CGG | - | chr4.4:19311555-19311574 | None:intergenic | 25.0% |
| !! | ATCGTGGATTATAATAGAAT+AGG | + | chr4.4:19310265-19310284 | MS.gene35157:intron | 25.0% |
| !! | TTTTTACACTGACATCTAAT+AGG | - | chr4.4:19308973-19308992 | None:intergenic | 25.0% |
| !!! | ATTTGTTATGTTGCTAAGAT+TGG | + | chr4.4:19311798-19311817 | MS.gene35157:intron | 25.0% |
| !!! | TCTTTGTCATTTTTACTTTC+TGG | - | chr4.4:19311284-19311303 | None:intergenic | 25.0% |
| !!! | TTAGCTAAGAAATTTTTTGG+TGG | - | chr4.4:19311738-19311757 | None:intergenic | 25.0% |
| !!! | TTGTGTTTTGTTGTGTTTTT+TGG | + | chr4.4:19309192-19309211 | MS.gene35157:intron | 25.0% |
| AAGAAGAAGATGAAGAACAA+TGG | + | chr4.4:19308243-19308262 | MS.gene35157:CDS | 30.0% | |
| AATATGAGTGACATGTGATA+TGG | - | chr4.4:19309960-19309979 | None:intergenic | 30.0% | |
| ACAGTAAAGTTGAACTTACT+TGG | + | chr4.4:19310364-19310383 | MS.gene35157:CDS | 30.0% | |
| AGATTGAGAAAGAAACTCAT+AGG | + | chr4.4:19309058-19309077 | MS.gene35157:CDS | 30.0% | |
| ATAAACCATACCTGAATTTC+AGG | - | chr4.4:19308789-19308808 | None:intergenic | 30.0% | |
| ATACAAGTTTCTTGAATAGC+GGG | - | chr4.4:19311853-19311872 | None:intergenic | 30.0% | |
| ATATGAGTGACATGTGATAT+GGG | - | chr4.4:19309959-19309978 | None:intergenic | 30.0% | |
| ATCACGAAAATCTTCTTCAT+CGG | - | chr4.4:19309408-19309427 | None:intergenic | 30.0% | |
| ATCTGAATTATTGTCAAGCA+AGG | - | chr4.4:19310973-19310992 | None:intergenic | 30.0% | |
| ATTCTAGATCATAAGAAAGG+AGG | - | chr4.4:19309833-19309852 | None:intergenic | 30.0% | |
| ATTGATACAGATACTGATGA+TGG | + | chr4.4:19308732-19308751 | MS.gene35157:CDS | 30.0% | |
| CAGACATATTATGGAAAAGA+AGG | + | chr4.4:19311058-19311077 | MS.gene35157:CDS | 30.0% | |
| CAGTAAAGTTGAACTTACTT+GGG | + | chr4.4:19310365-19310384 | MS.gene35157:CDS | 30.0% | |
| CTGAAGTTTAAAAAAGGCAA+GGG | + | chr4.4:19311410-19311429 | MS.gene35157:CDS | 30.0% | |
| GAACAAAGATTTCTATTCTC+GGG | + | chr4.4:19310332-19310351 | MS.gene35157:CDS | 30.0% | |
| GAAGACAATTGTGTTTCTTT+CGG | - | chr4.4:19312027-19312046 | None:intergenic | 30.0% | |
| GACAATAATTCAGATGAAGA+TGG | + | chr4.4:19310978-19310997 | MS.gene35157:CDS | 30.0% | |
| GTAAGTCAATTGTGTTTATC+TGG | + | chr4.4:19309137-19309156 | MS.gene35157:intron | 30.0% | |
| GTGAAGAATTATCAGTAGAA+AGG | + | chr4.4:19311986-19312005 | MS.gene35157:CDS | 30.0% | |
| GTTATTAAGGGACAAAAGAA+TGG | - | chr4.4:19310673-19310692 | None:intergenic | 30.0% | |
| TATCTTGGAAAAATCTTGTG+TGG | + | chr4.4:19310490-19310509 | MS.gene35157:intron | 30.0% | |
| TCAAGCAAATATATCACAAC+AGG | - | chr4.4:19309503-19309522 | None:intergenic | 30.0% | |
| TTATCTGTATCTGAATCCAT+AGG | - | chr4.4:19308702-19308721 | None:intergenic | 30.0% | |
| TTATGTTGCTAAGATTGGAA+TGG | + | chr4.4:19311803-19311822 | MS.gene35157:intron | 30.0% | |
| TTTATCAGACTTCTTCGAAT+TGG | - | chr4.4:19308289-19308308 | None:intergenic | 30.0% | |
| TTTATGGAGATTATACTTCC+CGG | + | chr4.4:19309896-19309915 | MS.gene35157:intron | 30.0% | |
| ! | TATCAAATTTTATGCTGCGA+TGG | + | chr4.4:19310590-19310609 | MS.gene35157:intron | 30.0% |
| ! | TCTGAAGTTTAAAAAAGGCA+AGG | + | chr4.4:19311409-19311428 | MS.gene35157:CDS | 30.0% |
| ! | TGGAGTTCAAAGATTTTGTT+TGG | + | chr4.4:19309157-19309176 | MS.gene35157:intron | 30.0% |
| ! | TTCAAGTTAGAAAAACATGG+TGG | - | chr4.4:19310035-19310054 | None:intergenic | 30.0% |
| ! | TTTTCAACTTGAATCAAGCA+TGG | + | chr4.4:19309559-19309578 | MS.gene35157:intron | 30.0% |
| !! | TGTGAATTAGCCTTATCTTT+GGG | - | chr4.4:19308495-19308514 | None:intergenic | 30.0% |
| !!! | ATGCTTTGATTTGTTTTTCC+TGG | - | chr4.4:19311144-19311163 | None:intergenic | 30.0% |
| !!! | GTTCTTCTTGTTTTCCTTTT+TGG | - | chr4.4:19308202-19308221 | None:intergenic | 30.0% |
| !!! | TGTCATTACGCTTTGTTTTA+TGG | + | chr4.4:19309880-19309899 | MS.gene35157:intron | 30.0% |
| !!! | TTGTTGTGTTTTTTGGTTGT+AGG | + | chr4.4:19309199-19309218 | MS.gene35157:intron | 30.0% |
| AAAAAAGGCAAGGGCAAAAA+AGG | + | chr4.4:19311419-19311438 | MS.gene35157:CDS | 35.0% | |
| AAAATGAGGTAACTACTCAG+AGG | - | chr4.4:19310530-19310549 | None:intergenic | 35.0% | |
| AAGAACCATGAAGACAACAA+AGG | + | chr4.4:19308216-19308235 | MS.gene35157:CDS | 35.0% | |
| AAGATGAAGAACAATGGCAA+GGG | + | chr4.4:19308249-19308268 | MS.gene35157:CDS | 35.0% | |
| AAGGTTTATTCCAGACGATA+TGG | + | chr4.4:19310179-19310198 | MS.gene35157:CDS | 35.0% | |
| ACTACTATTTCACTCTGATG+GGG | + | chr4.4:19311647-19311666 | MS.gene35157:intron | 35.0% | |
| ACTATTTATCCAACCGAGTT+TGG | + | chr4.4:19309284-19309303 | MS.gene35157:CDS | 35.0% | |
| AGAACCATGAAGACAACAAA+GGG | + | chr4.4:19308217-19308236 | MS.gene35157:CDS | 35.0% | |
| AGATCATAAGCTCCAAGATA+TGG | + | chr4.4:19311301-19311320 | MS.gene35157:CDS | 35.0% | |
| AGATGACTTCTTCATTGATG+AGG | + | chr4.4:19311226-19311245 | MS.gene35157:CDS | 35.0% | |
| ATAACAATGAGACTGATGAG+CGG | + | chr4.4:19310919-19310938 | MS.gene35157:CDS | 35.0% | |
| ATAAGCTCCAAGATATGGAT+GGG | + | chr4.4:19311306-19311325 | MS.gene35157:CDS | 35.0% | |
| ATCACACAGTAATGACAAAG+AGG | + | chr4.4:19308311-19308330 | MS.gene35157:CDS | 35.0% | |
| ATCTTGCAAACCTGTATTGA+AGG | - | chr4.4:19311033-19311052 | None:intergenic | 35.0% | |
| ATGAACCTGAAATTCAGGTA+TGG | + | chr4.4:19308781-19308800 | MS.gene35157:intron | 35.0% | |
| ATGAATGAGGAGGAAGTTAA+AGG | + | chr4.4:19309317-19309336 | MS.gene35157:CDS | 35.0% | |
| ATTATGATATGGACAGGAAG+AGG | + | chr4.4:19309029-19309048 | MS.gene35157:intron | 35.0% | |
| CACTACTATTTCACTCTGAT+GGG | + | chr4.4:19311646-19311665 | MS.gene35157:intron | 35.0% | |
| CGCATTCTAGATCATAAGAA+AGG | - | chr4.4:19309836-19309855 | None:intergenic | 35.0% | |
| GAAACACAATTGTCTTCTGA+TGG | + | chr4.4:19312030-19312049 | MS.gene35157:CDS | 35.0% | |
| GAAAGGAGGATAACAAAGAT+AGG | - | chr4.4:19309819-19309838 | None:intergenic | 35.0% | |
| GAAAGTTAAGAATGCGAAAC+CGG | + | chr4.4:19308632-19308651 | MS.gene35157:CDS | 35.0% | |
| GAATCTTTATCTTGCTCTCT+AGG | + | chr4.4:19310052-19310071 | MS.gene35157:intron | 35.0% | |
| GACAATATCAGCGTGTAAAA+TGG | - | chr4.4:19309689-19309708 | None:intergenic | 35.0% | |
| GCACGTCAAAATAGTAAACA+TGG | - | chr4.4:19309992-19310011 | None:intergenic | 35.0% | |
| GGAATAAACCTTAAGTCAAG+TGG | - | chr4.4:19310171-19310190 | None:intergenic | 35.0% | |
| GGATCATCAAATGCATTGTT+TGG | - | chr4.4:19311488-19311507 | None:intergenic | 35.0% | |
| TAGAAAAACATGGTGGTAAG+AGG | - | chr4.4:19310028-19310047 | None:intergenic | 35.0% | |
| TCACTACTATTTCACTCTGA+TGG | + | chr4.4:19311645-19311664 | MS.gene35157:intron | 35.0% | |
| TCAGTTCCATTATCAATCTC+CGG | - | chr4.4:19308654-19308673 | None:intergenic | 35.0% | |
| TGAATGAGGAGGAAGTTAAA+GGG | + | chr4.4:19309318-19309337 | MS.gene35157:CDS | 35.0% | |
| TGTTTGAATTCCATATCGTC+TGG | - | chr4.4:19310192-19310211 | None:intergenic | 35.0% | |
| TTCCTTTCTATTGTGATAGC+TGG | + | chr4.4:19310836-19310855 | MS.gene35157:intron | 35.0% | |
| TTTGTAAATGTGATCTGCTG+TGG | - | chr4.4:19310112-19310131 | None:intergenic | 35.0% | |
| ! | AACCTTTGTTTGATGCTTTG+GGG | - | chr4.4:19308391-19308410 | None:intergenic | 35.0% |
| ! | ATAGCGGGAAGTACAATTAT+AGG | - | chr4.4:19311838-19311857 | None:intergenic | 35.0% |
| ! | CAACCTTTGTTTGATGCTTT+GGG | - | chr4.4:19308392-19308411 | None:intergenic | 35.0% |
| ! | CAATGATGATGATGAAGAAG+AGG | + | chr4.4:19308602-19308621 | MS.gene35157:intron | 35.0% |
| ! | CTCTAGGTACTATTTTGCTT+TGG | + | chr4.4:19310068-19310087 | MS.gene35157:intron | 35.0% |
| ! | CTTTTAAATTGTGGATCGGT+GGG | - | chr4.4:19311551-19311570 | None:intergenic | 35.0% |
| ! | GAGTGATAGTGATGATAGTA+AGG | + | chr4.4:19310896-19310915 | MS.gene35157:CDS | 35.0% |
| ! | TAGCGGGAAGTACAATTATA+GGG | - | chr4.4:19311837-19311856 | None:intergenic | 35.0% |
| ! | TAGGTACTATTTTGCTTTGG+TGG | + | chr4.4:19310071-19310090 | MS.gene35157:intron | 35.0% |
| ! | TTCAAAGTATTTGCTCGAAG+AGG | - | chr4.4:19310402-19310421 | None:intergenic | 35.0% |
| ! | TTCGAGCAAATACTTTGAAG+CGG | + | chr4.4:19310403-19310422 | MS.gene35157:CDS | 35.0% |
| !! | ATCTTGTGTGGTGTTAGTTT+TGG | + | chr4.4:19310502-19310521 | MS.gene35157:intron | 35.0% |
| !! | CTGTGAATTAGCCTTATCTT+TGG | - | chr4.4:19308496-19308515 | None:intergenic | 35.0% |
| AACATGGTGGTAAGAGGAAA+AGG | - | chr4.4:19310022-19310041 | None:intergenic | 40.0% | |
| AACGTGAGAAAAAGAAAGCC+AGG | + | chr4.4:19311123-19311142 | MS.gene35157:CDS | 40.0% | |
| AACTCTTGTCAGTGAACATG+CGG | - | chr4.4:19308434-19308453 | None:intergenic | 40.0% | |
| AAGTGATGAAGACGATAGTG+AGG | + | chr4.4:19309373-19309392 | MS.gene35157:CDS | 40.0% | |
| ACACGCTGATATTGTCAAGT+GGG | + | chr4.4:19309693-19309712 | MS.gene35157:intron | 40.0% | |
| ACATGGTGGTAAGAGGAAAA+GGG | - | chr4.4:19310021-19310040 | None:intergenic | 40.0% | |
| AGAGGATGAACCTGAAATTC+AGG | + | chr4.4:19308776-19308795 | MS.gene35157:CDS | 40.0% | |
| AGCCAGCTATCACAATAGAA+AGG | - | chr4.4:19310841-19310860 | None:intergenic | 40.0% | |
| AGTAGAACAGAGTAGTGATG+AGG | + | chr4.4:19308575-19308594 | MS.gene35157:intron | 40.0% | |
| AGTTGAACTTACTTGGGATG+AGG | + | chr4.4:19310371-19310390 | MS.gene35157:CDS | 40.0% | |
| ATTATACTTCCCGGAACACA+TGG | + | chr4.4:19309905-19309924 | MS.gene35157:intron | 40.0% | |
| ATTTGACCAGTCCATTAGGT+GGG | - | chr4.4:19309259-19309278 | None:intergenic | 40.0% | |
| CAAAAAAGGCAAGGGCAAAA+AGG | + | chr4.4:19311433-19311452 | MS.gene35157:CDS | 40.0% | |
| CAATTGTCTTCTGATGGTTC+TGG | + | chr4.4:19312036-19312055 | MS.gene35157:CDS | 40.0% | |
| CAGTTTGGGAAGAATATCTG+AGG | + | chr4.4:19311096-19311115 | MS.gene35157:CDS | 40.0% | |
| CATAAGCTCCAAGATATGGA+TGG | + | chr4.4:19311305-19311324 | MS.gene35157:CDS | 40.0% | |
| CATATGAAAAGAGCAGGATG+AGG | + | chr4.4:19309456-19309475 | MS.gene35157:CDS | 40.0% | |
| CATCGAATCCACTTGACTTA+AGG | + | chr4.4:19310160-19310179 | MS.gene35157:CDS | 40.0% | |
| CCACCGATCCACAATTTAAA+AGG | + | chr4.4:19311549-19311568 | MS.gene35157:CDS | 40.0% | |
| GAAGATGAAGAACAATGGCA+AGG | + | chr4.4:19308248-19308267 | MS.gene35157:CDS | 40.0% | |
| GAGAAGATAGATGCAAAACG+TGG | - | chr4.4:19311509-19311528 | None:intergenic | 40.0% | |
| GGAGGATAACAAAGATAGGA+AGG | - | chr4.4:19309815-19309834 | None:intergenic | 40.0% | |
| GTATATGTATGTGCATGGCA+TGG | - | chr4.4:19310635-19310654 | None:intergenic | 40.0% | |
| TAAGCTCCAAGATATGGATG+GGG | + | chr4.4:19311307-19311326 | MS.gene35157:CDS | 40.0% | |
| TACACGCTGATATTGTCAAG+TGG | + | chr4.4:19309692-19309711 | MS.gene35157:intron | 40.0% | |
| TCACCATCAAATAGAGCAAC+AGG | - | chr4.4:19309344-19309363 | None:intergenic | 40.0% | |
| TCACTATTTCCCATGTGTTC+CGG | - | chr4.4:19309918-19309937 | None:intergenic | 40.0% | |
| TGAGAAAGAAACTCATAGGC+TGG | + | chr4.4:19309062-19309081 | MS.gene35157:CDS | 40.0% | |
| TGAGCGTATATGTATGTGCA+TGG | - | chr4.4:19310640-19310659 | None:intergenic | 40.0% | |
| TGGCTGTTGTTAATATGGAC+TGG | + | chr4.4:19309082-19309101 | MS.gene35157:CDS | 40.0% | |
| TTATACTTCCCGGAACACAT+GGG | + | chr4.4:19309906-19309925 | MS.gene35157:intron | 40.0% | |
| ! | ACCTTTGTTTGATGCTTTGG+GGG | - | chr4.4:19308390-19308409 | None:intergenic | 40.0% |
| ! | AGATGATGATGCCATGGATA+TGG | + | chr4.4:19311001-19311020 | MS.gene35157:CDS | 40.0% |
| ! | CCTTTTAAATTGTGGATCGG+TGG | - | chr4.4:19311552-19311571 | None:intergenic | 40.0% |
| ! | GCAACCTTTGTTTGATGCTT+TGG | - | chr4.4:19308393-19308412 | None:intergenic | 40.0% |
| ! | TAGGCTGGCTGTTGTTAATA+TGG | + | chr4.4:19309077-19309096 | MS.gene35157:CDS | 40.0% |
| ! | TCTTTGTTCTCGTAGTTTGC+AGG | - | chr4.4:19310321-19310340 | None:intergenic | 40.0% |
| ! | TGAAGATCCTCGATTTGCAA+TGG | + | chr4.4:19308338-19308357 | MS.gene35157:CDS | 40.0% |
| ! | TGATCTAGAATGCGTCTATG+TGG | + | chr4.4:19309842-19309861 | MS.gene35157:intron | 40.0% |
| ! | TGATGAGAACGATTCTGAAG+AGG | + | chr4.4:19308758-19308777 | MS.gene35157:CDS | 40.0% |
| !! | ACCTAATGGACTGGTCAAAT+CGG | + | chr4.4:19309259-19309278 | MS.gene35157:CDS | 40.0% |
| !! | CTGTTGTTAATATGGACTGG+CGG | + | chr4.4:19309085-19309104 | MS.gene35157:CDS | 40.0% |
| !! | TTCTGATGGTTCTGGTATGA+AGG | + | chr4.4:19312044-19312063 | MS.gene35157:CDS | 40.0% |
| !!! | TGTTTTTTGGTTGTAGGCTG+TGG | + | chr4.4:19309205-19309224 | MS.gene35157:intron | 40.0% |
| AAAAGGCAAGGGCAAAAAGG+CGG | + | chr4.4:19311436-19311455 | MS.gene35157:CDS | 45.0% | |
| ACCATGAAGACAACAAAGGG+AGG | + | chr4.4:19308220-19308239 | MS.gene35157:CDS | 45.0% | |
| ACCTCTGATGCAACATCCTT+AGG | - | chr4.4:19310219-19310238 | None:intergenic | 45.0% | |
| AGTTCATTAGCCCCACCTAA+TGG | + | chr4.4:19309245-19309264 | MS.gene35157:CDS | 45.0% | |
| ATGGAGGTGACCTTCAATAC+AGG | + | chr4.4:19311020-19311039 | MS.gene35157:CDS | 45.0% | |
| CACTATTTCCCATGTGTTCC+GGG | - | chr4.4:19309917-19309936 | None:intergenic | 45.0% | |
| CACTCTGATGGGGTAAACTT+GGG | + | chr4.4:19311657-19311676 | MS.gene35157:intron | 45.0% | |
| CATACGTTGAAGGCCAAACT+CGG | - | chr4.4:19309300-19309319 | None:intergenic | 45.0% | |
| CATTGACATCAGAGGATAGG+TGG | - | chr4.4:19312170-19312189 | None:intergenic | 45.0% | |
| CCTCCTCATTCATACGTTGA+AGG | - | chr4.4:19309310-19309329 | None:intergenic | 45.0% | |
| CCTTCAACGTATGAATGAGG+AGG | + | chr4.4:19309307-19309326 | MS.gene35157:CDS | 45.0% | |
| CGGAGAATGCTATTGATGAG+GGG | + | chr4.4:19311456-19311475 | MS.gene35157:CDS | 45.0% | |
| GAAGAACAATGGCAAGGGTA+AGG | + | chr4.4:19308254-19308273 | MS.gene35157:CDS | 45.0% | |
| GAGCTCTTCTTTGCTTGCTT+TGG | - | chr4.4:19311336-19311355 | None:intergenic | 45.0% | |
| GATTTGACCAGTCCATTAGG+TGG | - | chr4.4:19309260-19309279 | None:intergenic | 45.0% | |
| GCGAAACCGGAGATTGATAA+TGG | + | chr4.4:19308645-19308664 | MS.gene35157:CDS | 45.0% | |
| GCGAGGTAAACCCAAAGATA+AGG | + | chr4.4:19308482-19308501 | MS.gene35157:intron | 45.0% | |
| GCGGAGAATGCTATTGATGA+GGG | + | chr4.4:19311455-19311474 | MS.gene35157:CDS | 45.0% | |
| GGAATTCAAACAGCCTCCTA+AGG | + | chr4.4:19310200-19310219 | MS.gene35157:CDS | 45.0% | |
| GGTAAGAGGAAAAGGGAGAT+GGG | - | chr4.4:19310014-19310033 | None:intergenic | 45.0% | |
| GTGTGAACCATTGCAAATCG+AGG | - | chr4.4:19308348-19308367 | None:intergenic | 45.0% | |
| TCACTCTGATGGGGTAAACT+TGG | + | chr4.4:19311656-19311675 | MS.gene35157:intron | 45.0% | |
| TCCTAAGGATGTTGCATCAG+AGG | + | chr4.4:19310215-19310234 | MS.gene35157:CDS | 45.0% | |
| TCTGATGCAACATCCTTAGG+AGG | - | chr4.4:19310216-19310235 | None:intergenic | 45.0% | |
| TGCGTGCATATGAAAAGAGC+AGG | + | chr4.4:19309450-19309469 | MS.gene35157:CDS | 45.0% | |
| TGGCCTTCAACGTATGAATG+AGG | + | chr4.4:19309304-19309323 | MS.gene35157:CDS | 45.0% | |
| TGGTAAGAGGAAAAGGGAGA+TGG | - | chr4.4:19310015-19310034 | None:intergenic | 45.0% | |
| TTTGACCAGTCCATTAGGTG+GGG | - | chr4.4:19309258-19309277 | None:intergenic | 45.0% | |
| ! | ACCCCCAAAGCATCAAACAA+AGG | + | chr4.4:19308386-19308405 | MS.gene35157:CDS | 45.0% |
| ! | ACTGTTGCTTGCTGATGACA+AGG | + | chr4.4:19311358-19311377 | MS.gene35157:CDS | 45.0% |
| ! | AGATGGAGATGATGATGCCA+TGG | + | chr4.4:19310995-19311014 | MS.gene35157:CDS | 45.0% |
| ! | ATAGCTGGCTCAGTTGGAAA+TGG | + | chr4.4:19310851-19310870 | MS.gene35157:intron | 45.0% |
| ! | ATTGTGATAGCTGGCTCAGT+TGG | + | chr4.4:19310845-19310864 | MS.gene35157:intron | 45.0% |
| ! | CTGTTGCTTGCTGATGACAA+GGG | + | chr4.4:19311359-19311378 | MS.gene35157:CDS | 45.0% |
| ! | GGTTCTGGTATGAAGGAGAA+GGG | + | chr4.4:19312051-19312070 | MS.gene35157:CDS | 45.0% |
| ! | TCCTCCCTTTGTTGTCTTCA+TGG | - | chr4.4:19308224-19308243 | None:intergenic | 45.0% |
| ! | TGATGATGCCATGGATATGG+AGG | + | chr4.4:19311004-19311023 | MS.gene35157:CDS | 45.0% |
| ! | TGTTGCTTGCTGATGACAAG+GGG | + | chr4.4:19311360-19311379 | MS.gene35157:CDS | 45.0% |
| !! | ACCGATTTGACCAGTCCATT+AGG | - | chr4.4:19309263-19309282 | None:intergenic | 45.0% |
| !! | TGGTTCTGGTATGAAGGAGA+AGG | + | chr4.4:19312050-19312069 | MS.gene35157:CDS | 45.0% |
| AGGCAAGGGCAAAAAAGGCA+AGG | + | chr4.4:19311424-19311443 | MS.gene35157:CDS | 50.0% | |
| CTGGTATGAAGGAGAAGGGT+GGG | + | chr4.4:19312055-19312074 | MS.gene35157:CDS | 50.0% | |
| GAAGGTCACCTCCATATCCA+TGG | - | chr4.4:19311015-19311034 | None:intergenic | 50.0% | |
| GGAACTGAGTCTGAAGAGAG+CGG | + | chr4.4:19308666-19308685 | MS.gene35157:CDS | 50.0% | |
| GGCAAGGGCAAAAAAGGCAA+GGG | + | chr4.4:19311425-19311444 | MS.gene35157:CDS | 50.0% | |
| GGCGGAGAATGCTATTGATG+AGG | + | chr4.4:19311454-19311473 | MS.gene35157:CDS | 50.0% | |
| GGGCCTGTTGCTCTATTTGA+TGG | + | chr4.4:19309338-19309357 | MS.gene35157:CDS | 50.0% | |
| GGTTTACCTCGCTTATCGAC+AGG | - | chr4.4:19308474-19308493 | None:intergenic | 50.0% | |
| GTCTGAAGAGAGCGGTGATT+CGG | + | chr4.4:19308674-19308693 | MS.gene35157:CDS | 50.0% | |
| TCTGGTATGAAGGAGAAGGG+TGG | + | chr4.4:19312054-19312073 | MS.gene35157:CDS | 50.0% | |
| TGGCTACCCCATCCATATCT+TGG | - | chr4.4:19311316-19311335 | None:intergenic | 50.0% | |
| TGGTATGAAGGAGAAGGGTG+GGG | + | chr4.4:19312056-19312075 | MS.gene35157:CDS | 50.0% | |
| TTATCGACAGGCGCAGAAGA+GGG | - | chr4.4:19308462-19308481 | None:intergenic | 50.0% | |
| TTGGGGGTTCACGAAAACGT+GGG | - | chr4.4:19308374-19308393 | None:intergenic | 50.0% | |
| TTTGGGGGTTCACGAAAACG+TGG | - | chr4.4:19308375-19308394 | None:intergenic | 50.0% | |
| ! | ATTAGCCCCACCTAATGGAC+TGG | + | chr4.4:19309250-19309269 | MS.gene35157:CDS | 50.0% |
| !! | CGGTTGGTCTCTTAACACGA+TGG | + | chr4.4:19308944-19308963 | MS.gene35157:intron | 50.0% |
| !! | TATGGACTGGCGGTATGTGA+AGG | + | chr4.4:19309095-19309114 | MS.gene35157:CDS | 50.0% |
| AAGGAGAAGGGTGGGGAAGA+AGG | + | chr4.4:19312063-19312082 | MS.gene35157:CDS | 55.0% | |
| AGGAGAAGGGTGGGGAAGAA+GGG | + | chr4.4:19312064-19312083 | MS.gene35157:CDS | 55.0% | |
| CGTTGAAGGCCAAACTCGGT+TGG | - | chr4.4:19309296-19309315 | None:intergenic | 55.0% | |
| CTGGCACAGAAGCAGCAGAA+GGG | + | chr4.4:19311961-19311980 | MS.gene35157:CDS | 55.0% | |
| CTTATCGACAGGCGCAGAAG+AGG | - | chr4.4:19308463-19308482 | None:intergenic | 55.0% | |
| CTTGCTGATGACAAGGGGAC+AGG | + | chr4.4:19311365-19311384 | MS.gene35157:CDS | 55.0% | |
| GATGACAAGGGGACAGGTAC+TGG | + | chr4.4:19311371-19311390 | MS.gene35157:CDS | 55.0% | |
| GCGGAAATTCACTGACGAGC+AGG | + | chr4.4:19310422-19310441 | MS.gene35157:CDS | 55.0% | |
| GGGTTCACGAAAACGTGGGT+CGG | - | chr4.4:19308370-19308389 | None:intergenic | 55.0% | |
| ! | GAGCGGTGATTCGGAACCTA+TGG | + | chr4.4:19308683-19308702 | MS.gene35157:CDS | 55.0% |
| !! | GGGACAGGTACTGGTCTCAA+GGG | + | chr4.4:19311380-19311399 | MS.gene35157:CDS | 55.0% |
| GCTGGCACAGAAGCAGCAGA+AGG | + | chr4.4:19311960-19311979 | MS.gene35157:CDS | 60.0% | |
| TCTGCGCCTGTCGATAAGCG+AGG | + | chr4.4:19308465-19308484 | MS.gene35157:CDS | 60.0% | |
| TGCCAGCTGCCTGGCATACA+CGG | - | chr4.4:19311947-19311966 | None:intergenic | 60.0% | |
| !! | GGGGACAGGTACTGGTCTCA+AGG | + | chr4.4:19311379-19311398 | MS.gene35157:CDS | 60.0% |
| CTGCTTCTGTGCCAGCTGCC+TGG | - | chr4.4:19311956-19311975 | None:intergenic | 65.0% | |
| CGCCGTGTATGCCAGGCAGC+TGG | + | chr4.4:19311942-19311961 | MS.gene35157:CDS | 70.0% | |
| !! | GCAGGAGCGCCGTGTATGCC+AGG | + | chr4.4:19311935-19311954 | MS.gene35157:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 19308192 | 19312233 | 19308192 | ID=MS.gene35157 |
| chr4.4 | mRNA | 19308192 | 19312233 | 19308192 | ID=MS.gene35157.t1;Parent=MS.gene35157 |
| chr4.4 | exon | 19308192 | 19308486 | 19308192 | ID=MS.gene35157.t1.exon1;Parent=MS.gene35157.t1 |
| chr4.4 | CDS | 19308192 | 19308486 | 19308192 | ID=cds.MS.gene35157.t1;Parent=MS.gene35157.t1 |
| chr4.4 | exon | 19308631 | 19308797 | 19308631 | ID=MS.gene35157.t1.exon2;Parent=MS.gene35157.t1 |
| chr4.4 | CDS | 19308631 | 19308797 | 19308631 | ID=cds.MS.gene35157.t1;Parent=MS.gene35157.t1 |
| chr4.4 | exon | 19309045 | 19309116 | 19309045 | ID=MS.gene35157.t1.exon3;Parent=MS.gene35157.t1 |
| chr4.4 | CDS | 19309045 | 19309116 | 19309045 | ID=cds.MS.gene35157.t1;Parent=MS.gene35157.t1 |
| chr4.4 | exon | 19309221 | 19309477 | 19309221 | ID=MS.gene35157.t1.exon4;Parent=MS.gene35157.t1 |
| chr4.4 | CDS | 19309221 | 19309477 | 19309221 | ID=cds.MS.gene35157.t1;Parent=MS.gene35157.t1 |
| chr4.4 | exon | 19310074 | 19310236 | 19310074 | ID=MS.gene35157.t1.exon5;Parent=MS.gene35157.t1 |
| chr4.4 | CDS | 19310074 | 19310236 | 19310074 | ID=cds.MS.gene35157.t1;Parent=MS.gene35157.t1 |
| chr4.4 | exon | 19310315 | 19310443 | 19310315 | ID=MS.gene35157.t1.exon6;Parent=MS.gene35157.t1 |
| chr4.4 | CDS | 19310315 | 19310443 | 19310315 | ID=cds.MS.gene35157.t1;Parent=MS.gene35157.t1 |
| chr4.4 | exon | 19310855 | 19311570 | 19310855 | ID=MS.gene35157.t1.exon7;Parent=MS.gene35157.t1 |
| chr4.4 | CDS | 19310855 | 19311570 | 19310855 | ID=cds.MS.gene35157.t1;Parent=MS.gene35157.t1 |
| chr4.4 | exon | 19311939 | 19312233 | 19311939 | ID=MS.gene35157.t1.exon8;Parent=MS.gene35157.t1 |
| chr4.4 | CDS | 19311939 | 19312233 | 19311939 | ID=cds.MS.gene35157.t1;Parent=MS.gene35157.t1 |
| Gene Sequence |
| Protein sequence |
