Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73500.t1 | XP_003617620.1 | 95.9 | 464 | 11 | 1 | 4 | 459 | 2 | 465 | 1.70E-248 | 868.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73500.t1 | Q9ZNW0 | 68.6 | 465 | 138 | 3 | 1 | 459 | 2 | 464 | 1.3e-180 | 634.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73500.t1 | G7K8M6 | 95.9 | 464 | 11 | 1 | 4 | 459 | 2 | 465 | 1.2e-248 | 868.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene05792 | MS.gene73500 | PPI |
| MS.gene73500 | MS.gene86296 | PPI |
| MS.gene73500 | MS.gene015893 | PPI |
| MS.gene73500 | MS.gene058245 | PPI |
| MS.gene73500 | MS.gene037362 | PPI |
| MS.gene55980 | MS.gene73500 | PPI |
| MS.gene002676 | MS.gene73500 | PPI |
| MS.gene73500 | MS.gene002675 | PPI |
| MS.gene86222 | MS.gene73500 | PPI |
| MS.gene44289 | MS.gene73500 | PPI |
| MS.gene006731 | MS.gene73500 | PPI |
| MS.gene05791 | MS.gene73500 | PPI |
| MS.gene73500 | MS.gene045436 | PPI |
| MS.gene73500 | MS.gene070758 | PPI |
| MS.gene021573 | MS.gene73500 | PPI |
| MS.gene73500 | MS.gene029211 | PPI |
| MS.gene73500 | MS.gene93131 | PPI |
| MS.gene65650 | MS.gene73500 | PPI |
| MS.gene29165 | MS.gene73500 | PPI |
| MS.gene73500 | MS.gene67725 | PPI |
| MS.gene73500 | MS.gene54070 | PPI |
| MS.gene73500 | MS.gene00146 | PPI |
| MS.gene070761 | MS.gene73500 | PPI |
| MS.gene004357 | MS.gene73500 | PPI |
| MS.gene070760 | MS.gene73500 | PPI |
| MS.gene73500 | MS.gene027729 | PPI |
| MS.gene73500 | MS.gene43614 | PPI |
| MS.gene43604 | MS.gene73500 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73500.t1 | MTR_5g093580 | 95.905 | 464 | 11 | 1 | 4 | 459 | 2 | 465 | 0.0 | 909 |
| MS.gene73500.t1 | MTR_8g037355 | 28.105 | 153 | 108 | 2 | 85 | 236 | 9 | 160 | 6.81e-20 | 92.8 |
| MS.gene73500.t1 | MTR_4g131690 | 28.796 | 191 | 119 | 5 | 68 | 242 | 28 | 217 | 5.83e-15 | 77.0 |
| MS.gene73500.t1 | MTR_5g072480 | 28.824 | 170 | 106 | 5 | 53 | 209 | 559 | 726 | 5.09e-12 | 68.9 |
| MS.gene73500.t1 | MTR_5g072480 | 28.824 | 170 | 106 | 5 | 53 | 209 | 558 | 725 | 5.13e-12 | 68.9 |
| MS.gene73500.t1 | MTR_5g072480 | 28.824 | 170 | 106 | 5 | 53 | 209 | 375 | 542 | 5.32e-12 | 68.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73500.t1 | AT5G55130 | 68.602 | 465 | 138 | 3 | 1 | 459 | 2 | 464 | 0.0 | 667 |
| MS.gene73500.t1 | AT5G55130 | 63.871 | 465 | 133 | 4 | 1 | 459 | 2 | 437 | 0.0 | 606 |
| MS.gene73500.t1 | AT5G55130 | 71.709 | 357 | 99 | 1 | 103 | 459 | 6 | 360 | 0.0 | 550 |
| MS.gene73500.t1 | AT2G21470 | 28.049 | 164 | 116 | 2 | 77 | 238 | 5 | 168 | 1.93e-19 | 91.7 |
| MS.gene73500.t1 | AT2G21470 | 28.049 | 164 | 116 | 2 | 77 | 238 | 5 | 168 | 2.24e-19 | 91.3 |
| MS.gene73500.t1 | AT2G21470 | 28.049 | 164 | 116 | 2 | 77 | 238 | 5 | 168 | 2.46e-19 | 91.3 |
| MS.gene73500.t1 | AT5G19180 | 29.586 | 169 | 105 | 3 | 87 | 242 | 49 | 216 | 4.92e-15 | 77.4 |
| MS.gene73500.t1 | AT5G19180 | 29.586 | 169 | 105 | 3 | 87 | 242 | 49 | 216 | 5.81e-15 | 77.0 |
| MS.gene73500.t1 | AT5G06460 | 31.613 | 155 | 95 | 4 | 64 | 209 | 471 | 623 | 1.11e-14 | 77.4 |
| MS.gene73500.t1 | AT2G30110 | 28.824 | 170 | 109 | 5 | 49 | 209 | 460 | 626 | 1.27e-11 | 67.8 |
Find 107 sgRNAs with CRISPR-Local
Find 289 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATGGAATGTTCAAGGAATT+TGG | 0.178410 | 5.2:+78675445 | None:intergenic |
| TTCAAAATTGATGATATTTC+CGG | 0.185058 | 5.2:+78675400 | None:intergenic |
| TGTTCAATACCTTCACAAAA+TGG | 0.206041 | 5.2:-78675287 | MS.gene73500:CDS |
| GAACCATTGGAAGCGTGTTT+TGG | 0.256324 | 5.2:+78679751 | None:intergenic |
| CACCTTGTTCTTCCTTCCTT+TGG | 0.271336 | 5.2:-78679670 | MS.gene73500:CDS |
| CTTCCTTCCTTTGGTGTTCA+AGG | 0.288793 | 5.2:-78679661 | MS.gene73500:intron |
| GCAGCAGCGGATTTCACTTT+TGG | 0.291766 | 5.2:+78677953 | None:intergenic |
| CTTCTGCTAAGGATATTGTT+GGG | 0.314527 | 5.2:-78675258 | MS.gene73500:CDS |
| CACATGCAGCCCCTCGTATC+AGG | 0.323829 | 5.2:-78676865 | MS.gene73500:intron |
| ATCAATGTCTTCTTCTTCTT+CGG | 0.331405 | 5.2:-78679875 | None:intergenic |
| ATGCATTGTCTGCACGAATC+CGG | 0.339347 | 5.2:-78676429 | MS.gene73500:CDS |
| AAAGATGAAGAAGAGGAAAA+AGG | 0.342101 | 5.2:-78675376 | MS.gene73500:CDS |
| AGCTTTAGAGTCTAGGTTGC+CGG | 0.361157 | 5.2:-78675419 | MS.gene73500:CDS |
| AGCTAATAAGTGGGGAAGTT+AGG | 0.374352 | 5.2:+78675205 | None:intergenic |
| GTTGTGGGAGCCGGAGGATT+GGG | 0.376200 | 5.2:-78678381 | MS.gene73500:CDS |
| CAACTTTGGCATGCTGATCT+AGG | 0.393182 | 5.2:+78676667 | None:intergenic |
| ACTTCTGCTAAGGATATTGT+TGG | 0.395111 | 5.2:-78675259 | MS.gene73500:CDS |
| CATTCTCAGCTTTAGAGTCT+AGG | 0.402083 | 5.2:-78675426 | MS.gene73500:CDS |
| TGAGGTTCCAATCCATTTGT+AGG | 0.411651 | 5.2:+78679715 | None:intergenic |
| TCTGCGAACTTCCAATGCTT+TGG | 0.419925 | 5.2:-78677771 | MS.gene73500:CDS |
| CTCCATTGTCGGCGCAACTT+TGG | 0.419959 | 5.2:+78676653 | None:intergenic |
| GTTCAATACCTTCACAAAAT+GGG | 0.422324 | 5.2:-78675286 | MS.gene73500:CDS |
| ATCAGGTGCCGCTGTGGGAT+TGG | 0.423811 | 5.2:-78676848 | MS.gene73500:CDS |
| TGGCTGACCAATATATGCTT+CGG | 0.428030 | 5.2:+78677973 | None:intergenic |
| TCTTCACCATACCCTACAAA+TGG | 0.428964 | 5.2:-78679727 | MS.gene73500:CDS |
| TCTTAATTGCCTCGAGAGCT+TGG | 0.429943 | 5.2:+78676500 | None:intergenic |
| TCCAATCCATTTGTAGGGTA+TGG | 0.437064 | 5.2:+78679721 | None:intergenic |
| CTCGTATCAGGTGCCGCTGT+GGG | 0.438837 | 5.2:-78676853 | MS.gene73500:CDS |
| ACTTCTCATAATCAAATTCT+CGG | 0.443462 | 5.2:+78676121 | None:intergenic |
| TACTCCTAGTACTCCATTGT+CGG | 0.447816 | 5.2:+78676642 | None:intergenic |
| CGCGCGACAAGCAGCAGCAG+CGG | 0.448558 | 5.2:+78677940 | None:intergenic |
| TTCTGCTAAGGATATTGTTG+GGG | 0.451171 | 5.2:-78675257 | MS.gene73500:CDS |
| AGCTGAGAATGGAATGTTCA+AGG | 0.453312 | 5.2:+78675438 | None:intergenic |
| CACAGCGGCACCTGATACGA+GGG | 0.453639 | 5.2:+78676855 | None:intergenic |
| AGTTGTGGGAGCCGGAGGAT+TGG | 0.454012 | 5.2:-78678382 | MS.gene73500:CDS |
| TTTGAAGAAAGATGAAGAAG+AGG | 0.456679 | 5.2:-78675383 | MS.gene73500:CDS |
| GCTGAAAATTTCCAAAGCAT+TGG | 0.457701 | 5.2:+78677760 | None:intergenic |
| ATACACACCGAAGCATATAT+TGG | 0.458303 | 5.2:-78677980 | MS.gene73500:CDS |
| CTAGACTCTAAAGCTGAGAA+TGG | 0.462514 | 5.2:+78675427 | None:intergenic |
| CGCTGTGGGATTGGAAGGAC+AGG | 0.476028 | 5.2:-78676839 | MS.gene73500:intron |
| AGCAGGAGCACCCAATCCTC+CGG | 0.476202 | 5.2:+78678371 | None:intergenic |
| ACCATACCCTACAAATGGAT+TGG | 0.482774 | 5.2:-78679722 | MS.gene73500:CDS |
| TCCACAAGCTTCACAATGCA+TGG | 0.490862 | 5.2:+78676173 | None:intergenic |
| AGTGACTGCTGTGTGGTACT+AGG | 0.499373 | 5.2:-78677543 | MS.gene73500:CDS |
| GAAGTGACACAATCTTGAAA+TGG | 0.504910 | 5.2:+78675467 | None:intergenic |
| ATCAAAGAGAAGCATCCTTC+CGG | 0.504956 | 5.2:+78676450 | None:intergenic |
| ATCTACTTCCTAGTGAATCA+AGG | 0.509284 | 5.2:-78675564 | MS.gene73500:CDS |
| AGCAGTCACTGATCAGATAC+CGG | 0.509321 | 5.2:+78677556 | None:intergenic |
| TGCATTGTCTGCACGAATCC+GGG | 0.512742 | 5.2:-78676428 | MS.gene73500:CDS |
| TGCGCCGACAATGGAGTACT+AGG | 0.517421 | 5.2:-78676646 | MS.gene73500:CDS |
| GCAGTTGGTGAACCACTCTC+CGG | 0.522319 | 5.2:-78676469 | MS.gene73500:CDS |
| CCTCGTATCAGGTGCCGCTG+TGG | 0.524945 | 5.2:-78676854 | MS.gene73500:CDS |
| TTAACTACATAGCTAATAAG+TGG | 0.527371 | 5.2:+78675195 | None:intergenic |
| TAACTACATAGCTAATAAGT+GGG | 0.535080 | 5.2:+78675196 | None:intergenic |
| GCTCAGTAATATGCATAGAC+AGG | 0.540369 | 5.2:-78678207 | MS.gene73500:intron |
| GTATGGTGAAGAAGAACCAT+TGG | 0.541425 | 5.2:+78679738 | None:intergenic |
| GCTGCAAAATATAACAAAGC+AGG | 0.542406 | 5.2:+78678354 | None:intergenic |
| TGCCAAAGTTGCGCCGACAA+TGG | 0.544188 | 5.2:-78676655 | MS.gene73500:CDS |
| GAGGTTCCAATCCATTTGTA+GGG | 0.546528 | 5.2:+78679716 | None:intergenic |
| CTGCTGATCCTTGATTCACT+AGG | 0.546650 | 5.2:+78675556 | None:intergenic |
| TGCTAGATACGATATAATAG+TGG | 0.549564 | 5.2:-78677601 | MS.gene73500:intron |
| GGTGCCGCTGTGGGATTGGA+AGG | 0.551198 | 5.2:-78676844 | MS.gene73500:CDS |
| GGAAAGAGGCATCGATAGCA+AGG | 0.553750 | 5.2:+78676700 | None:intergenic |
| GGAAGTAGATTTAACTTCAA+CGG | 0.555004 | 5.2:+78675577 | None:intergenic |
| TGGCATGCTGATCTAGGTGG+TGG | 0.557957 | 5.2:+78676673 | None:intergenic |
| GCTGATCTAGGTGGTGGAGT+AGG | 0.558383 | 5.2:+78676679 | None:intergenic |
| AGAAATCATACCACATGCAA+GGG | 0.561762 | 5.2:+78676087 | None:intergenic |
| ACAATCTTGAAATGGTGAGC+TGG | 0.563760 | 5.2:+78675475 | None:intergenic |
| ATTAAGATTGCTGCTGCAGT+TGG | 0.563978 | 5.2:-78676484 | MS.gene73500:CDS |
| TTATATGTAGTATGCAGAAG+AGG | 0.574557 | 5.2:-78675328 | MS.gene73500:CDS |
| AGAAGCATCCTTCCGGAGAG+TGG | 0.575307 | 5.2:+78676457 | None:intergenic |
| AAGAAATCATACCACATGCA+AGG | 0.576332 | 5.2:+78676086 | None:intergenic |
| CTCCCAAAACACGCTTCCAA+TGG | 0.581859 | 5.2:-78679754 | MS.gene73500:CDS |
| CAACTCATCTGTTGAAGTCG+TGG | 0.586544 | 5.2:-78677807 | MS.gene73500:CDS |
| TCTGCTAAGGATATTGTTGG+GGG | 0.593899 | 5.2:-78675256 | MS.gene73500:CDS |
| CAAAGAAATAACTCTAAACA+AGG | 0.594530 | 5.2:-78675524 | MS.gene73500:CDS |
| CCACAGCGGCACCTGATACG+AGG | 0.596934 | 5.2:+78676854 | None:intergenic |
| CTGCTGTGTGGTACTAGGAA+AGG | 0.597449 | 5.2:-78677538 | MS.gene73500:intron |
| TGGCTGTCTCCAAGCTCTCG+AGG | 0.604810 | 5.2:-78676509 | MS.gene73500:CDS |
| CACTCAGACTCCCTTGCATG+TGG | 0.607922 | 5.2:-78676097 | MS.gene73500:intron |
| AGTAGATTTAACTTCAACGG+AGG | 0.608635 | 5.2:+78675580 | None:intergenic |
| TAGGTGGTGGAGTAGGAAAG+AGG | 0.608776 | 5.2:+78676686 | None:intergenic |
| TGTAGTACCTTGAACACCAA+AGG | 0.613859 | 5.2:+78679654 | None:intergenic |
| CAACAGATAATGCTCCCACC+CGG | 0.617846 | 5.2:-78677575 | MS.gene73500:CDS |
| CTTTGGCATGCTGATCTAGG+TGG | 0.619951 | 5.2:+78676670 | None:intergenic |
| TGAATCAAGGATCAGCAGCA+TGG | 0.619978 | 5.2:-78675551 | MS.gene73500:CDS |
| ATTGCACAGGTGAAAATCAG+AGG | 0.628081 | 5.2:-78676201 | MS.gene73500:intron |
| CACAGGTGAAAATCAGAGGA+AGG | 0.629739 | 5.2:-78676197 | MS.gene73500:intron |
| GTACCTTGAACACCAAAGGA+AGG | 0.633624 | 5.2:+78679658 | None:intergenic |
| TGGAGACAGCCAATTATACC+AGG | 0.633796 | 5.2:+78676520 | None:intergenic |
| GCAGTCACTGATCAGATACC+GGG | 0.637102 | 5.2:+78677557 | None:intergenic |
| TTGGTGAACCACTCTCCGGA+AGG | 0.643162 | 5.2:-78676465 | MS.gene73500:CDS |
| CTAACATCAACAAGCACATG+TGG | 0.644157 | 5.2:+78675499 | None:intergenic |
| CACCAAAGGAAGGAAGAACA+AGG | 0.647871 | 5.2:+78679668 | None:intergenic |
| GTCACTGATCAGATACCGGG+TGG | 0.650418 | 5.2:+78677560 | None:intergenic |
| TCTGATCAGTGACTGCTGTG+TGG | 0.668305 | 5.2:-78677550 | MS.gene73500:CDS |
| GACAATGGAGTACTAGGAGT+AGG | 0.670068 | 5.2:-78676640 | MS.gene73500:intron |
| ACAGCGGCACCTGATACGAG+GGG | 0.670870 | 5.2:+78676856 | None:intergenic |
| AACTACATAGCTAATAAGTG+GGG | 0.673584 | 5.2:+78675197 | None:intergenic |
| TCCATGCATTGTGAAGCTTG+TGG | 0.684097 | 5.2:-78676174 | MS.gene73500:CDS |
| CTGTATCTATGAATCATGTG+AGG | 0.684552 | 5.2:+78679697 | None:intergenic |
| GGGTATTGTTGATCATGACA+AGG | 0.685293 | 5.2:-78678234 | MS.gene73500:CDS |
| TCACTGATCAGATACCGGGT+GGG | 0.695189 | 5.2:+78677561 | None:intergenic |
| CTCACTATCTACAATCACAA+CGG | 0.713508 | 5.2:-78676727 | MS.gene73500:CDS |
| ACTATCTACAATCACAACGG+TGG | 0.719133 | 5.2:-78676724 | MS.gene73500:CDS |
| CAAAGGAAGGAAGAACAAGG+TGG | 0.719190 | 5.2:+78679671 | None:intergenic |
| CTGTCCTTCCAATCCCACAG+CGG | 0.786992 | 5.2:+78676840 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATACTATTGAAATTAATAA+AGG | + | chr5.2:78677866-78677885 | None:intergenic | 10.0% |
| !!! | TTTGTTACTATATTATTTTA+GGG | - | chr5.2:78677631-78677650 | MS.gene73500:intron | 10.0% |
| !!! | TTTTTATTCATATTTAATTC+TGG | + | chr5.2:78678006-78678025 | None:intergenic | 10.0% |
| !!! | TTTTTTAACTTATTTCTATA+AGG | + | chr5.2:78676498-78676517 | None:intergenic | 10.0% |
| !! | AATTAGAATTAGAATTAGTT+TGG | - | chr5.2:78675538-78675557 | MS.gene73500:CDS | 15.0% |
| !! | AGAATTAAATAAATAAACAG+TGG | - | chr5.2:78676066-78676085 | MS.gene73500:intron | 15.0% |
| !! | CTAAAATAATATAGTAACAA+AGG | + | chr5.2:78677632-78677651 | None:intergenic | 15.0% |
| !! | CTTATATAATATATTAGCTA+AGG | - | chr5.2:78678841-78678860 | MS.gene73500:intron | 15.0% |
| !! | TTAAAATACACTTACAAAAT+GGG | - | chr5.2:78679351-78679370 | MS.gene73500:intron | 15.0% |
| !!! | ATAAGTTAGTTTTTGTATTT+AGG | - | chr5.2:78679064-78679083 | MS.gene73500:intron | 15.0% |
| !!! | ATTAGAATTAGAATTAGTTT+GGG | - | chr5.2:78675539-78675558 | MS.gene73500:CDS | 15.0% |
| !!! | CTTTGTTACTATATTATTTT+AGG | - | chr5.2:78677630-78677649 | MS.gene73500:intron | 15.0% |
| !!! | TAAGTTTTTGTGAATATTTA+GGG | - | chr5.2:78677247-78677266 | MS.gene73500:intron | 15.0% |
| !!! | TTATATTTTGTTTATTTCCA+TGG | - | chr5.2:78676635-78676654 | MS.gene73500:intron | 15.0% |
| !!! | TTTAAAATACACTTACAAAA+TGG | - | chr5.2:78679350-78679369 | MS.gene73500:intron | 15.0% |
| !!! | TTTCAAAATTAGTAAGTTTT+GGG | + | chr5.2:78679234-78679253 | None:intergenic | 15.0% |
| !!! | TTTTCAAAATTAGTAAGTTT+TGG | + | chr5.2:78679235-78679254 | None:intergenic | 15.0% |
| !! | AAATAAGCTAAAAATATGGT+TGG | + | chr5.2:78678110-78678129 | None:intergenic | 20.0% |
| !! | AATAAGCTAAAAATATGGTT+GGG | + | chr5.2:78678109-78678128 | None:intergenic | 20.0% |
| !! | ATCTCGATTAATTTAGAAAA+AGG | - | chr5.2:78677704-78677723 | MS.gene73500:intron | 20.0% |
| !! | ATTATATAATCTTATTGCAC+AGG | - | chr5.2:78678864-78678883 | MS.gene73500:intron | 20.0% |
| !! | GACAAAATAAGCTAAAAATA+TGG | + | chr5.2:78678114-78678133 | None:intergenic | 20.0% |
| !! | GATATAATCAAAGACATAAA+GGG | + | chr5.2:78678290-78678309 | None:intergenic | 20.0% |
| !! | TAAAATAATGATCATAAGCA+AGG | + | chr5.2:78678698-78678717 | None:intergenic | 20.0% |
| !! | TAACTTATAATATTTGTGTC+CGG | + | chr5.2:78679052-78679071 | None:intergenic | 20.0% |
| !! | TAGAATTCTAATGATAGAAA+TGG | - | chr5.2:78678748-78678767 | MS.gene73500:intron | 20.0% |
| !! | TAGTAATAATATTCGAGAAA+AGG | - | chr5.2:78679256-78679275 | MS.gene73500:intron | 20.0% |
| !! | TCATTCTATAATATAGTGTT+GGG | - | chr5.2:78676308-78676327 | MS.gene73500:intron | 20.0% |
| !! | TCTCGATTAATTTAGAAAAA+GGG | - | chr5.2:78677705-78677724 | MS.gene73500:intron | 20.0% |
| !! | TGATATAATCAAAGACATAA+AGG | + | chr5.2:78678291-78678310 | None:intergenic | 20.0% |
| !! | TTCAAAAAGTCAAATGTATT+TGG | + | chr5.2:78678052-78678071 | None:intergenic | 20.0% |
| !! | TTGAAAATGTTAGATATAGT+TGG | - | chr5.2:78675510-78675529 | MS.gene73500:CDS | 20.0% |
| !! | TTTAACAAGATTATAGAACA+AGG | + | chr5.2:78676792-78676811 | None:intergenic | 20.0% |
| !!! | AACCTTTAGAATATAGTAAT+CGG | - | chr5.2:78676605-78676624 | MS.gene73500:intron | 20.0% |
| !!! | AATAAGTTATGTTTTCAAAC+AGG | - | chr5.2:78675753-78675772 | MS.gene73500:intron | 20.0% |
| !!! | AATATGATGAGTTTTTTCAT+TGG | - | chr5.2:78679384-78679403 | MS.gene73500:intron | 20.0% |
| !!! | AGATCCAAAAAATGAAATTT+TGG | - | chr5.2:78678025-78678044 | MS.gene73500:intron | 20.0% |
| !!! | ATAAGTTATGTTTTCAAACA+GGG | - | chr5.2:78675754-78675773 | MS.gene73500:intron | 20.0% |
| !!! | CAGTGATTAAAGTTTTATTT+TGG | - | chr5.2:78679132-78679151 | MS.gene73500:intron | 20.0% |
| !!! | CTAAGTTTTTGTGAATATTT+AGG | - | chr5.2:78677246-78677265 | MS.gene73500:intron | 20.0% |
| !!! | GATTATATCACATTATTTTG+AGG | - | chr5.2:78678301-78678320 | MS.gene73500:intron | 20.0% |
| !!! | TACATTTTAAAAAATTGCAC+AGG | - | chr5.2:78676815-78676834 | MS.gene73500:intron | 20.0% |
| !!! | TGATATTTTTTGTTCGATTT+TGG | + | chr5.2:78675274-78675293 | None:intergenic | 20.0% |
| !!! | TTAGAATTAGAATTAGTTTG+GGG | - | chr5.2:78675540-78675559 | MS.gene73500:CDS | 20.0% |
| !!! | TTCAAAATTGATGATATTTC+CGG | + | chr5.2:78679681-78679700 | None:intergenic | 20.0% |
| ! | AAAAAATTGCACAGGTAAAT+TGG | - | chr5.2:78676823-78676842 | MS.gene73500:intron | 25.0% |
| ! | AAAAATTGCACAGGTAAATT+GGG | - | chr5.2:78676824-78676843 | MS.gene73500:intron | 25.0% |
| ! | AACCGATTACTATATTCTAA+AGG | + | chr5.2:78676610-78676629 | None:intergenic | 25.0% |
| ! | AATATTTAGATTTCTGAGCT+AGG | - | chr5.2:78677808-78677827 | MS.gene73500:CDS | 25.0% |
| ! | ACTTCTCATAATCAAATTCT+CGG | + | chr5.2:78678960-78678979 | None:intergenic | 25.0% |
| ! | AGGTTAGATAATAATACACT+TGG | + | chr5.2:78679181-78679200 | None:intergenic | 25.0% |
| ! | ATAAGATCAAAGTTACAAAC+AGG | + | chr5.2:78677045-78677064 | None:intergenic | 25.0% |
| ! | ATAAGCTAAAAATATGGTTG+GGG | + | chr5.2:78678108-78678127 | None:intergenic | 25.0% |
| ! | ATATATAATGACACAGATGA+AGG | - | chr5.2:78677770-78677789 | MS.gene73500:CDS | 25.0% |
| ! | CAAAGAAATAACTCTAAACA+AGG | - | chr5.2:78679554-78679573 | MS.gene73500:intron | 25.0% |
| ! | CTCATTCTATAATATAGTGT+TGG | - | chr5.2:78676307-78676326 | MS.gene73500:intron | 25.0% |
| ! | GGTTAGATAATAATACACTT+GGG | + | chr5.2:78679180-78679199 | None:intergenic | 25.0% |
| ! | TGATAAGAAAAGAAATCACA+CGG | + | chr5.2:78677449-78677468 | None:intergenic | 25.0% |
| ! | TTATACACTTTACTAATTGC+CGG | - | chr5.2:78679030-78679049 | MS.gene73500:intron | 25.0% |
| ! | TTTCCTATCTTCAATATGAT+CGG | - | chr5.2:78677348-78677367 | MS.gene73500:intron | 25.0% |
| !! | AAAATTGCACAAGGATTTTA+GGG | + | chr5.2:78677916-78677935 | None:intergenic | 25.0% |
| !! | ATATAAGCACTTTTCATGAT+AGG | - | chr5.2:78675710-78675729 | MS.gene73500:intron | 25.0% |
| !! | TAGAATTAGAATTAGTTTGG+GGG | - | chr5.2:78675541-78675560 | MS.gene73500:CDS | 25.0% |
| !!! | AGTTTTATTTGCTAAACTTG+TGG | - | chr5.2:78676897-78676916 | MS.gene73500:intron | 25.0% |
| !!! | ATGATCATTATTTTACGCAT+TGG | - | chr5.2:78678703-78678722 | MS.gene73500:intron | 25.0% |
| !!! | ATTTTAGTTCCTGGTATAAT+TGG | - | chr5.2:78678549-78678568 | MS.gene73500:intron | 25.0% |
| !!! | CATAAATTAGTTTTACACTG+TGG | - | chr5.2:78679294-78679313 | MS.gene73500:intron | 25.0% |
| !!! | TGGTCCAAAATTTCATTTTT+TGG | + | chr5.2:78678032-78678051 | None:intergenic | 25.0% |
| AAAGATGAAGAAGAGGAAAA+AGG | - | chr5.2:78679702-78679721 | MS.gene73500:CDS | 30.0% | |
| AACTTTAATCACTGATGAGT+TGG | + | chr5.2:78679126-78679145 | None:intergenic | 30.0% | |
| AATGGAATGTTCAAGGAATT+TGG | + | chr5.2:78679636-78679655 | None:intergenic | 30.0% | |
| AGACTATTTGGAAGAGATTA+TGG | + | chr5.2:78676548-78676567 | None:intergenic | 30.0% | |
| AGCAATGTAGTTATAAATGG+AGG | + | chr5.2:78676123-78676142 | None:intergenic | 30.0% | |
| ATCTCATCTACAATTCATGT+CGG | - | chr5.2:78677177-78677196 | MS.gene73500:intron | 30.0% | |
| ATGTAGACAGCATGATTTAT+AGG | - | chr5.2:78678138-78678157 | MS.gene73500:intron | 30.0% | |
| ATTCAGCGGTAATATTCAAA+AGG | + | chr5.2:78677426-78677445 | None:intergenic | 30.0% | |
| CACAGCAATGTAGTTATAAA+TGG | + | chr5.2:78676126-78676145 | None:intergenic | 30.0% | |
| CAGTAAAGATCAAAGAAAAC+AGG | + | chr5.2:78677393-78677412 | None:intergenic | 30.0% | |
| GAAGTTATTAACATACAACC+CGG | + | chr5.2:78678671-78678690 | None:intergenic | 30.0% | |
| GTAACATAATTCGTGTACTT+TGG | - | chr5.2:78675897-78675916 | MS.gene73500:intron | 30.0% | |
| GTTCAATACCTTCACAAAAT+GGG | - | chr5.2:78679792-78679811 | MS.gene73500:CDS | 30.0% | |
| GTTCTCTCAAAATTTATGTC+AGG | + | chr5.2:78675635-78675654 | None:intergenic | 30.0% | |
| TAAACACTAGTGAGACTATT+TGG | + | chr5.2:78676560-78676579 | None:intergenic | 30.0% | |
| TACACTACACATGAAGAATT+CGG | + | chr5.2:78676399-78676418 | None:intergenic | 30.0% | |
| TGCTAGATACGATATAATAG+TGG | - | chr5.2:78677477-78677496 | MS.gene73500:intron | 30.0% | |
| TGTTCAATACCTTCACAAAA+TGG | - | chr5.2:78679791-78679810 | MS.gene73500:CDS | 30.0% | |
| TTATATGTAGTATGCAGAAG+AGG | - | chr5.2:78679750-78679769 | MS.gene73500:CDS | 30.0% | |
| TTCAGCGGTAATATTCAAAA+GGG | + | chr5.2:78677425-78677444 | None:intergenic | 30.0% | |
| TTTGAAGAAAGATGAAGAAG+AGG | - | chr5.2:78679695-78679714 | MS.gene73500:CDS | 30.0% | |
| ! | AAATTGCACAAGGATTTTAG+GGG | + | chr5.2:78677915-78677934 | None:intergenic | 30.0% |
| ! | AAGTAAAACCCATTTTGTGA+AGG | + | chr5.2:78679803-78679822 | None:intergenic | 30.0% |
| ! | GAAAATTGCACAAGGATTTT+AGG | + | chr5.2:78677917-78677936 | None:intergenic | 30.0% |
| ! | GGAAGTAGATTTAACTTCAA+CGG | + | chr5.2:78679504-78679523 | None:intergenic | 30.0% |
| ! | TAAGGGTTAACTAAGTTGAA+GGG | - | chr5.2:78675589-78675608 | MS.gene73500:intron | 30.0% |
| ! | TATTTGCTAAACTTGTGGTA+TGG | - | chr5.2:78676902-78676921 | MS.gene73500:intron | 30.0% |
| ! | TCTCTCAAATCTTTTGATGT+GGG | - | chr5.2:78676212-78676231 | MS.gene73500:intron | 30.0% |
| ! | TTAACTAAGTTGAAGGGTTA+GGG | - | chr5.2:78675595-78675614 | MS.gene73500:intron | 30.0% |
| ! | TTCTCTCAAATCTTTTGATG+TGG | - | chr5.2:78676211-78676230 | MS.gene73500:intron | 30.0% |
| ! | TTGTTATATTTTGCAGCTTC+TGG | - | chr5.2:78676730-78676749 | MS.gene73500:CDS | 30.0% |
| !!! | AAGTCGTCAATTTTAGTTGT+GGG | - | chr5.2:78676682-78676701 | MS.gene73500:CDS | 30.0% |
| !!! | ATTATTTTGAGGTACACTCA+TGG | - | chr5.2:78678312-78678331 | MS.gene73500:intron | 30.0% |
| !!! | TCGGTCTTTCTTTTTTCTTA+AGG | - | chr5.2:78677367-78677386 | MS.gene73500:intron | 30.0% |
| !!! | TTATCCTTTTTTGCATGATG+TGG | - | chr5.2:78676284-78676303 | MS.gene73500:intron | 30.0% |
| AAATGGATGCTTATTTGTGC+AGG | - | chr5.2:78678765-78678784 | MS.gene73500:intron | 35.0% | |
| AAGAAATCATACCACATGCA+AGG | + | chr5.2:78678995-78679014 | None:intergenic | 35.0% | |
| AATTCAAGAGTTCCGAATTC+GGG | - | chr5.2:78675936-78675955 | MS.gene73500:intron | 35.0% | |
| ACATAATTCGTGTACTTTGG+TGG | - | chr5.2:78675900-78675919 | MS.gene73500:intron | 35.0% | |
| ACATCTTAATTCCATCTCGT+TGG | + | chr5.2:78678729-78678748 | None:intergenic | 35.0% | |
| ACTTCTGCTAAGGATATTGT+TGG | - | chr5.2:78679819-78679838 | MS.gene73500:CDS | 35.0% | |
| AGAAATCATACCACATGCAA+GGG | + | chr5.2:78678994-78679013 | None:intergenic | 35.0% | |
| AGACCGATCATATTGAAGAT+AGG | + | chr5.2:78677354-78677373 | None:intergenic | 35.0% | |
| ATACACACCGAAGCATATAT+TGG | - | chr5.2:78677098-78677117 | MS.gene73500:intron | 35.0% | |
| ATCTACTTCCTAGTGAATCA+AGG | - | chr5.2:78679514-78679533 | MS.gene73500:intron | 35.0% | |
| ATGAAGAATTCGGTACGTAT+GGG | + | chr5.2:78676389-78676408 | None:intergenic | 35.0% | |
| CAAATGCATTGCAAATCATG+TGG | + | chr5.2:78676161-78676180 | None:intergenic | 35.0% | |
| CAATTCAAGAGTTCCGAATT+CGG | - | chr5.2:78675935-78675954 | MS.gene73500:intron | 35.0% | |
| CTAATTTATGCGATAGTGCA+TGG | + | chr5.2:78679284-78679303 | None:intergenic | 35.0% | |
| CTCACTATCTACAATCACAA+CGG | - | chr5.2:78678351-78678370 | MS.gene73500:CDS | 35.0% | |
| CTGTATCTATGAATCATGTG+AGG | + | chr5.2:78675384-78675403 | None:intergenic | 35.0% | |
| CTTCTGCTAAGGATATTGTT+GGG | - | chr5.2:78679820-78679839 | MS.gene73500:CDS | 35.0% | |
| GAAGTGACACAATCTTGAAA+TGG | + | chr5.2:78679614-78679633 | None:intergenic | 35.0% | |
| GATGCAGTATAGCAAAAACT+AGG | + | chr5.2:78679423-78679442 | None:intergenic | 35.0% | |
| GCTGAAAATTTCCAAAGCAT+TGG | + | chr5.2:78677321-78677340 | None:intergenic | 35.0% | |
| GCTGCAAAATATAACAAAGC+AGG | + | chr5.2:78676727-78676746 | None:intergenic | 35.0% | |
| GTACACGAATTATGTTACTC+TGG | + | chr5.2:78675895-78675914 | None:intergenic | 35.0% | |
| GTCTGAATTGATGTCAAACA+AGG | - | chr5.2:78677601-78677620 | MS.gene73500:intron | 35.0% | |
| TATCAGCATTATCCTTTCAC+TGG | + | chr5.2:78676027-78676046 | None:intergenic | 35.0% | |
| TATTGTTCATGTGTGTTGTG+TGG | - | chr5.2:78676954-78676973 | MS.gene73500:intron | 35.0% | |
| TGGTTCTTGTACATCTCATT+CGG | - | chr5.2:78678470-78678489 | MS.gene73500:intron | 35.0% | |
| TTCTGCTAAGGATATTGTTG+GGG | - | chr5.2:78679821-78679840 | MS.gene73500:CDS | 35.0% | |
| TTGCAAATCATGTGGATTTG+AGG | + | chr5.2:78676153-78676172 | None:intergenic | 35.0% | |
| TTTAGATTTCTGAGCTAGGT+TGG | - | chr5.2:78677812-78677831 | MS.gene73500:CDS | 35.0% | |
| ! | AGTAGATTTAACTTCAACGG+AGG | + | chr5.2:78679501-78679520 | None:intergenic | 35.0% |
| ! | CACATGATTTGCAATGCATT+TGG | - | chr5.2:78676159-78676178 | MS.gene73500:CDS | 35.0% |
| ! | CTAAGGGTTAACTAAGTTGA+AGG | - | chr5.2:78675588-78675607 | MS.gene73500:intron | 35.0% |
| ! | GGTGTGTATAATCTGAAACA+TGG | + | chr5.2:78677087-78677106 | None:intergenic | 35.0% |
| ! | GTTAACTAAGTTGAAGGGTT+AGG | - | chr5.2:78675594-78675613 | MS.gene73500:intron | 35.0% |
| ! | GTTTATTTCCATGGTTTGCA+GGG | - | chr5.2:78676644-78676663 | MS.gene73500:CDS | 35.0% |
| ! | TAATCACTGATGAGTTGGAT+TGG | + | chr5.2:78679121-78679140 | None:intergenic | 35.0% |
| ! | TGTTTATTTCCATGGTTTGC+AGG | - | chr5.2:78676643-78676662 | MS.gene73500:CDS | 35.0% |
| !! | AATGGGTTTTACTTCTGCTA+AGG | - | chr5.2:78679809-78679828 | MS.gene73500:CDS | 35.0% |
| !!! | AGTCTGTTCATTTTAGTTCC+TGG | - | chr5.2:78678540-78678559 | MS.gene73500:intron | 35.0% |
| !!! | GAAGTCGTCAATTTTAGTTG+TGG | - | chr5.2:78676681-78676700 | MS.gene73500:CDS | 35.0% |
| !!! | TAAGTTTTGGGATCAGTACA+GGG | + | chr5.2:78679222-78679241 | None:intergenic | 35.0% |
| !!! | TCTACAATTCATGTCGGTTT+TGG | - | chr5.2:78677183-78677202 | MS.gene73500:intron | 35.0% |
| !!! | TTCAACTGGTTTTGAGCTAA+GGG | - | chr5.2:78675572-78675591 | MS.gene73500:CDS | 35.0% |
| !!! | TTTCAACTGGTTTTGAGCTA+AGG | - | chr5.2:78675571-78675590 | MS.gene73500:CDS | 35.0% |
| AAAATCTGCCATCCAACACA+GGG | - | chr5.2:78679093-78679112 | MS.gene73500:intron | 40.0% | |
| AAGAAATCACACGGATTCAG+CGG | + | chr5.2:78677440-78677459 | None:intergenic | 40.0% | |
| ACAATCTTGAAATGGTGAGC+TGG | + | chr5.2:78679606-78679625 | None:intergenic | 40.0% | |
| ACATAATTCGCAATTCGCGT+TGG | + | chr5.2:78676448-78676467 | None:intergenic | 40.0% | |
| ACCATACCCTACAAATGGAT+TGG | - | chr5.2:78675356-78675375 | MS.gene73500:CDS | 40.0% | |
| ACTATCTACAATCACAACGG+TGG | - | chr5.2:78678354-78678373 | MS.gene73500:CDS | 40.0% | |
| AGCACTTATGATACAGCCTA+AGG | + | chr5.2:78675780-78675799 | None:intergenic | 40.0% | |
| AGCTGAGAATGGAATGTTCA+AGG | + | chr5.2:78679643-78679662 | None:intergenic | 40.0% | |
| ATTAAGATTGCTGCTGCAGT+TGG | - | chr5.2:78678594-78678613 | MS.gene73500:intron | 40.0% | |
| ATTGCACAGGTGAAAATCAG+AGG | - | chr5.2:78678877-78678896 | MS.gene73500:intron | 40.0% | |
| ATTTGGTACGCGTGAATTCA+TGG | - | chr5.2:78675970-78675989 | MS.gene73500:intron | 40.0% | |
| CATGAAGAATTCGGTACGTA+TGG | + | chr5.2:78676390-78676409 | None:intergenic | 40.0% | |
| CGAATTCGGAACTCTTGAAT+TGG | + | chr5.2:78675937-78675956 | None:intergenic | 40.0% | |
| CTAACATCAACAAGCACATG+TGG | + | chr5.2:78679582-78679601 | None:intergenic | 40.0% | |
| CTAGGAGTAGGTATGTTGTT+TGG | - | chr5.2:78678450-78678469 | MS.gene73500:intron | 40.0% | |
| CTTAGTGGGAAAATTGCACA+AGG | + | chr5.2:78677925-78677944 | None:intergenic | 40.0% | |
| GAGGTTCCAATCCATTTGTA+GGG | + | chr5.2:78675365-78675384 | None:intergenic | 40.0% | |
| GCTCAGTAATATGCATAGAC+AGG | - | chr5.2:78676871-78676890 | MS.gene73500:intron | 40.0% | |
| GTATGGTGAAGAAGAACCAT+TGG | + | chr5.2:78675343-78675362 | None:intergenic | 40.0% | |
| GTCTCACTAGTGTTTATGCT+AGG | - | chr5.2:78676564-78676583 | MS.gene73500:intron | 40.0% | |
| GTGTCCTTATCCTAAGCTTA+CGG | + | chr5.2:78676101-78676120 | None:intergenic | 40.0% | |
| TAAAATCTGCCATCCAACAC+AGG | - | chr5.2:78679092-78679111 | MS.gene73500:intron | 40.0% | |
| TAAGGATATTGTTGGGGGTT+TGG | - | chr5.2:78679827-78679846 | MS.gene73500:CDS | 40.0% | |
| TACTCCTAGTACTCCATTGT+CGG | + | chr5.2:78678439-78678458 | None:intergenic | 40.0% | |
| TATGGTTGGGGAAACGTTAA+TGG | + | chr5.2:78678096-78678115 | None:intergenic | 40.0% | |
| TCCAATCCATTTGTAGGGTA+TGG | + | chr5.2:78675360-78675379 | None:intergenic | 40.0% | |
| TCTGCTAAGGATATTGTTGG+GGG | - | chr5.2:78679822-78679841 | MS.gene73500:CDS | 40.0% | |
| TCTTCACCATACCCTACAAA+TGG | - | chr5.2:78675351-78675370 | MS.gene73500:CDS | 40.0% | |
| TGAAGAATTCGGTACGTATG+GGG | + | chr5.2:78676388-78676407 | None:intergenic | 40.0% | |
| TGAGCCACATCATGCAAAAA+AGG | + | chr5.2:78676291-78676310 | None:intergenic | 40.0% | |
| TGAGGTTCCAATCCATTTGT+AGG | + | chr5.2:78675366-78675385 | None:intergenic | 40.0% | |
| TGGAGAATTCGCACAAATTG+CGG | - | chr5.2:78675990-78676009 | MS.gene73500:intron | 40.0% | |
| TGGCTGACCAATATATGCTT+CGG | + | chr5.2:78677108-78677127 | None:intergenic | 40.0% | |
| TGTAGTACCTTGAACACCAA+AGG | + | chr5.2:78675427-78675446 | None:intergenic | 40.0% | |
| TTTCGCCCACAATCAATAGA+AGG | + | chr5.2:78677841-78677860 | None:intergenic | 40.0% | |
| ! | ATGTTTTCAAACAGGGCCTT+AGG | - | chr5.2:78675761-78675780 | MS.gene73500:intron | 40.0% |
| ! | GGGTATTGTTGATCATGACA+AGG | - | chr5.2:78676844-78676863 | MS.gene73500:CDS | 40.0% |
| ! | TACTCGCAGAAGTGCAAAAA+GGG | + | chr5.2:78676980-78676999 | None:intergenic | 40.0% |
| ! | TATTTTGCAGCTTCTGGTGT+TGG | - | chr5.2:78676736-78676755 | MS.gene73500:intron | 40.0% |
| ! | TGTGCAATTTTCCCACTAAG+CGG | - | chr5.2:78677925-78677944 | MS.gene73500:intron | 40.0% |
| !! | AACCATTGGAAGCGTGTTTT+GGG | + | chr5.2:78675329-78675348 | None:intergenic | 40.0% |
| !! | AATCTTGATTTGCCGCTTAG+TGG | + | chr5.2:78677940-78677959 | None:intergenic | 40.0% |
| !! | ATCAAAGAGAAGCATCCTTC+CGG | + | chr5.2:78678631-78678650 | None:intergenic | 40.0% |
| !! | ATCTTGATTTGCCGCTTAGT+GGG | + | chr5.2:78677939-78677958 | None:intergenic | 40.0% |
| !! | CATTCTCAGCTTTAGAGTCT+AGG | - | chr5.2:78679652-78679671 | MS.gene73500:intron | 40.0% |
| !! | CTAGACTCTAAAGCTGAGAA+TGG | + | chr5.2:78679654-78679673 | None:intergenic | 40.0% |
| !!! | GTAAGTTTTGGGATCAGTAC+AGG | + | chr5.2:78679223-78679242 | None:intergenic | 40.0% |
| !!! | TCAATTTTAGTTGTGGGAGC+CGG | - | chr5.2:78676688-78676707 | MS.gene73500:CDS | 40.0% |
| AGAACAAATCGCAACAGCAG+GGG | + | chr5.2:78678505-78678524 | None:intergenic | 45.0% | |
| AGCAGTCACTGATCAGATAC+CGG | + | chr5.2:78677525-78677544 | None:intergenic | 45.0% | |
| ATGCATTGTCTGCACGAATC+CGG | - | chr5.2:78678649-78678668 | MS.gene73500:intron | 45.0% | |
| CAAAGGAAGGAAGAACAAGG+TGG | + | chr5.2:78675410-78675429 | None:intergenic | 45.0% | |
| CAACTCATCTGTTGAAGTCG+TGG | - | chr5.2:78677271-78677290 | MS.gene73500:intron | 45.0% | |
| CAACTTTGGCATGCTGATCT+AGG | + | chr5.2:78678414-78678433 | None:intergenic | 45.0% | |
| CACAGGTGAAAATCAGAGGA+AGG | - | chr5.2:78678881-78678900 | MS.gene73500:intron | 45.0% | |
| CACCAAAGGAAGGAAGAACA+AGG | + | chr5.2:78675413-78675432 | None:intergenic | 45.0% | |
| CACCTTGTTCTTCCTTCCTT+TGG | - | chr5.2:78675408-78675427 | MS.gene73500:CDS | 45.0% | |
| CAGAACAAATCGCAACAGCA+GGG | + | chr5.2:78678506-78678525 | None:intergenic | 45.0% | |
| CGTATGGGGATATAGAGCTT+CGG | + | chr5.2:78676374-78676393 | None:intergenic | 45.0% | |
| CTGCTGATCCTTGATTCACT+AGG | + | chr5.2:78679525-78679544 | None:intergenic | 45.0% | |
| GGAACTCTTGAATTGGATCG+CGG | + | chr5.2:78675930-78675949 | None:intergenic | 45.0% | |
| GTACCTTGAACACCAAAGGA+AGG | + | chr5.2:78675423-78675442 | None:intergenic | 45.0% | |
| GTCAAATGCACCGTAAGCTT+AGG | - | chr5.2:78676088-78676107 | MS.gene73500:intron | 45.0% | |
| TATCCTTTCACTGGAACGCT+TGG | + | chr5.2:78676018-78676037 | None:intergenic | 45.0% | |
| TCAGAACAAATCGCAACAGC+AGG | + | chr5.2:78678507-78678526 | None:intergenic | 45.0% | |
| TCCACAAGCTTCACAATGCA+TGG | + | chr5.2:78678908-78678927 | None:intergenic | 45.0% | |
| TCCATGCATTGTGAAGCTTG+TGG | - | chr5.2:78678904-78678923 | MS.gene73500:intron | 45.0% | |
| TCTGCGAACTTCCAATGCTT+TGG | - | chr5.2:78677307-78677326 | MS.gene73500:intron | 45.0% | |
| TCTTAATTGCCTCGAGAGCT+TGG | + | chr5.2:78678581-78678600 | None:intergenic | 45.0% | |
| TGAAGAAGAGGAAAAAGGCG+CGG | - | chr5.2:78679707-78679726 | MS.gene73500:CDS | 45.0% | |
| TGAATCAAGGATCAGCAGCA+TGG | - | chr5.2:78679527-78679546 | MS.gene73500:intron | 45.0% | |
| TGCACCGTAAGCTTAGGATA+AGG | - | chr5.2:78676094-78676113 | MS.gene73500:intron | 45.0% | |
| TGGAGACAGCCAATTATACC+AGG | + | chr5.2:78678561-78678580 | None:intergenic | 45.0% | |
| TGGGGGTTGCTTATTTCAAC+TGG | - | chr5.2:78675558-78675577 | MS.gene73500:CDS | 45.0% | |
| ! | GACAATGGAGTACTAGGAGT+AGG | - | chr5.2:78678438-78678457 | MS.gene73500:intron | 45.0% |
| ! | GGACGCCTTCTATTGATTGT+GGG | - | chr5.2:78677833-78677852 | MS.gene73500:intron | 45.0% |
| ! | GTACTCGCAGAAGTGCAAAA+AGG | + | chr5.2:78676981-78677000 | None:intergenic | 45.0% |
| ! | TGGACGCCTTCTATTGATTG+TGG | - | chr5.2:78677832-78677851 | MS.gene73500:intron | 45.0% |
| !! | ACCTACGCTACTAGCTTTGA+TGG | - | chr5.2:78676256-78676275 | MS.gene73500:intron | 45.0% |
| !! | AGCTTTAGAGTCTAGGTTGC+CGG | - | chr5.2:78679659-78679678 | MS.gene73500:intron | 45.0% |
| !! | CCTACGCTACTAGCTTTGAT+GGG | - | chr5.2:78676257-78676276 | MS.gene73500:intron | 45.0% |
| !! | CTACGCTACTAGCTTTGATG+GGG | - | chr5.2:78676258-78676277 | MS.gene73500:intron | 45.0% |
| !! | CTTCCTTCCTTTGGTGTTCA+AGG | - | chr5.2:78675417-78675436 | MS.gene73500:CDS | 45.0% |
| !! | GAACCATTGGAAGCGTGTTT+TGG | + | chr5.2:78675330-78675349 | None:intergenic | 45.0% |
| AACGGAGGCTGCATTTGCAT+TGG | + | chr5.2:78679486-78679505 | None:intergenic | 50.0% | |
| AGTGACTGCTGTGTGGTACT+AGG | - | chr5.2:78677535-78677554 | MS.gene73500:intron | 50.0% | |
| CAACAGATAATGCTCCCACC+CGG | - | chr5.2:78677503-78677522 | MS.gene73500:intron | 50.0% | |
| CCCATCAAAGCTAGTAGCGT+AGG | + | chr5.2:78676260-78676279 | None:intergenic | 50.0% | |
| CTCCCAAAACACGCTTCCAA+TGG | - | chr5.2:78675324-78675343 | MS.gene73500:CDS | 50.0% | |
| CTGCTGTGTGGTACTAGGAA+AGG | - | chr5.2:78677540-78677559 | MS.gene73500:CDS | 50.0% | |
| CTTTGGCATGCTGATCTAGG+TGG | + | chr5.2:78678411-78678430 | None:intergenic | 50.0% | |
| GCAGTCACTGATCAGATACC+GGG | + | chr5.2:78677524-78677543 | None:intergenic | 50.0% | |
| GTACCAAGCGTTCCAGTGAA+AGG | - | chr5.2:78676012-78676031 | MS.gene73500:intron | 50.0% | |
| TATAGAGCTTCGGTACGCGT+TGG | + | chr5.2:78676364-78676383 | None:intergenic | 50.0% | |
| TCACTGATCAGATACCGGGT+GGG | + | chr5.2:78677520-78677539 | None:intergenic | 50.0% | |
| TCGCAACAGCAGGGGAAAAA+TGG | + | chr5.2:78678497-78678516 | None:intergenic | 50.0% | |
| TCTGATCAGTGACTGCTGTG+TGG | - | chr5.2:78677528-78677547 | MS.gene73500:intron | 50.0% | |
| TGCATTGTCTGCACGAATCC+GGG | - | chr5.2:78678650-78678669 | MS.gene73500:intron | 50.0% | |
| TTCGGGTACCTCAGCGAATT+TGG | - | chr5.2:78675953-78675972 | MS.gene73500:intron | 50.0% | |
| ! | ATTTCCATGGTTTGCAGGGC+AGG | - | chr5.2:78676648-78676667 | MS.gene73500:CDS | 50.0% |
| ! | TGTTGGGGGTTTGGAGTCTT+GGG | - | chr5.2:78679836-78679855 | MS.gene73500:CDS | 50.0% |
| ! | TTACGCATTGGCCAACGAGA+TGG | - | chr5.2:78678715-78678734 | MS.gene73500:intron | 50.0% |
| ! | TTCGCTGAGGTACCCGAATT+CGG | + | chr5.2:78675951-78675970 | None:intergenic | 50.0% |
| ! | TTGTTGGGGGTTTGGAGTCT+TGG | - | chr5.2:78679835-78679854 | MS.gene73500:CDS | 50.0% |
| !! | GCAGCAGCGGATTTCACTTT+TGG | + | chr5.2:78677128-78677147 | None:intergenic | 50.0% |
| !! | GGAAAGAGGCATCGATAGCA+AGG | + | chr5.2:78678381-78678400 | None:intergenic | 50.0% |
| !! | TAGGTGGTGGAGTAGGAAAG+AGG | + | chr5.2:78678395-78678414 | None:intergenic | 50.0% |
| !!! | ATTTTAGTTGTGGGAGCCGG+AGG | - | chr5.2:78676691-78676710 | MS.gene73500:CDS | 50.0% |
| CACGCGTACCAAATTCGCTG+AGG | + | chr5.2:78675964-78675983 | None:intergenic | 55.0% | |
| CACTCAGACTCCCTTGCATG+TGG | - | chr5.2:78678981-78679000 | MS.gene73500:intron | 55.0% | |
| CTCCATTGTCGGCGCAACTT+TGG | + | chr5.2:78678428-78678447 | None:intergenic | 55.0% | |
| CTGTCCTTCCAATCCCACAG+CGG | + | chr5.2:78678241-78678260 | None:intergenic | 55.0% | |
| GATTGGCACCCTGTGTTGGA+TGG | + | chr5.2:78679104-78679123 | None:intergenic | 55.0% | |
| GTCACTGATCAGATACCGGG+TGG | + | chr5.2:78677521-78677540 | None:intergenic | 55.0% | |
| TGGCATGCTGATCTAGGTGG+TGG | + | chr5.2:78678408-78678427 | None:intergenic | 55.0% | |
| TTGGTGAACCACTCTCCGGA+AGG | - | chr5.2:78678613-78678632 | MS.gene73500:intron | 55.0% | |
| TTTGCCTGCCCTGCAAACCA+TGG | + | chr5.2:78676655-78676674 | None:intergenic | 55.0% | |
| ! | ATTCGCGTTGGTACGCGGTA+CGG | + | chr5.2:78676436-78676455 | None:intergenic | 55.0% |
| ! | TCGCAATTCGCGTTGGTACG+CGG | + | chr5.2:78676441-78676460 | None:intergenic | 55.0% |
| ! | TGCCAAAGTTGCGCCGACAA+TGG | - | chr5.2:78678423-78678442 | MS.gene73500:intron | 55.0% |
| ! | TGCGCCGACAATGGAGTACT+AGG | - | chr5.2:78678432-78678451 | MS.gene73500:intron | 55.0% |
| !! | AGAAGCATCCTTCCGGAGAG+TGG | + | chr5.2:78678624-78678643 | None:intergenic | 55.0% |
| !! | GCAGTTGGTGAACCACTCTC+CGG | - | chr5.2:78678609-78678628 | MS.gene73500:intron | 55.0% |
| !! | GCTGATCTAGGTGGTGGAGT+AGG | + | chr5.2:78678402-78678421 | None:intergenic | 55.0% |
| !! | GTTGGATTGGCACCCTGTGT+TGG | + | chr5.2:78679108-78679127 | None:intergenic | 55.0% |
| ACAGCGGCACCTGATACGAG+GGG | + | chr5.2:78678225-78678244 | None:intergenic | 60.0% | |
| AGTTGTGGGAGCCGGAGGAT+TGG | - | chr5.2:78676696-78676715 | MS.gene73500:CDS | 60.0% | |
| CACAGCGGCACCTGATACGA+GGG | + | chr5.2:78678226-78678245 | None:intergenic | 60.0% | |
| CACATGCAGCCCCTCGTATC+AGG | - | chr5.2:78678213-78678232 | MS.gene73500:CDS | 60.0% | |
| CGCTGTGGGATTGGAAGGAC+AGG | - | chr5.2:78678239-78678258 | MS.gene73500:CDS | 60.0% | |
| GTTGGTACGCGGTACGGGTA+CGG | + | chr5.2:78676430-78676449 | None:intergenic | 60.0% | |
| GTTGTGGGAGCCGGAGGATT+GGG | - | chr5.2:78676697-78676716 | MS.gene73500:CDS | 60.0% | |
| TGGCTGTCTCCAAGCTCTCG+AGG | - | chr5.2:78678569-78678588 | MS.gene73500:intron | 60.0% | |
| TTGGTACGCGGTACGGGTAC+GGG | + | chr5.2:78676429-78676448 | None:intergenic | 60.0% | |
| ! | TTCGCGTTGGTACGCGGTAC+GGG | + | chr5.2:78676435-78676454 | None:intergenic | 60.0% |
| !! | AGCAGGAGCACCCAATCCTC+CGG | + | chr5.2:78676710-78676729 | None:intergenic | 60.0% |
| !! | ATCAGGTGCCGCTGTGGGAT+TGG | - | chr5.2:78678230-78678249 | MS.gene73500:CDS | 60.0% |
| !! | CTCGTATCAGGTGCCGCTGT+GGG | - | chr5.2:78678225-78678244 | MS.gene73500:CDS | 60.0% |
| CCACAGCGGCACCTGATACG+AGG | + | chr5.2:78678227-78678246 | None:intergenic | 65.0% | |
| !! | CCTCGTATCAGGTGCCGCTG+TGG | - | chr5.2:78678224-78678243 | MS.gene73500:CDS | 65.0% |
| !! | GGTGCCGCTGTGGGATTGGA+AGG | - | chr5.2:78678234-78678253 | MS.gene73500:CDS | 65.0% |
| CGCGCGACAAGCAGCAGCAG+CGG | + | chr5.2:78677141-78677160 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 78675207 | 78679893 | 78675207 | ID=MS.gene73500 |
| chr5.2 | mRNA | 78675207 | 78679893 | 78675207 | ID=MS.gene73500.t1;Parent=MS.gene73500 |
| chr5.2 | exon | 78679662 | 78679893 | 78679662 | ID=MS.gene73500.t1.exon1;Parent=MS.gene73500.t1 |
| chr5.2 | CDS | 78679662 | 78679893 | 78679662 | ID=cds.MS.gene73500.t1;Parent=MS.gene73500.t1 |
| chr5.2 | exon | 78678343 | 78678435 | 78678343 | ID=MS.gene73500.t1.exon2;Parent=MS.gene73500.t1 |
| chr5.2 | CDS | 78678343 | 78678435 | 78678343 | ID=cds.MS.gene73500.t1;Parent=MS.gene73500.t1 |
| chr5.2 | exon | 78678208 | 78678263 | 78678208 | ID=MS.gene73500.t1.exon3;Parent=MS.gene73500.t1 |
| chr5.2 | CDS | 78678208 | 78678263 | 78678208 | ID=cds.MS.gene73500.t1;Parent=MS.gene73500.t1 |
| chr5.2 | exon | 78677941 | 78678005 | 78677941 | ID=MS.gene73500.t1.exon4;Parent=MS.gene73500.t1 |
| chr5.2 | CDS | 78677941 | 78678005 | 78677941 | ID=cds.MS.gene73500.t1;Parent=MS.gene73500.t1 |
| chr5.2 | exon | 78677758 | 78677832 | 78677758 | ID=MS.gene73500.t1.exon5;Parent=MS.gene73500.t1 |
| chr5.2 | CDS | 78677758 | 78677832 | 78677758 | ID=cds.MS.gene73500.t1;Parent=MS.gene73500.t1 |
| chr5.2 | exon | 78677539 | 78677617 | 78677539 | ID=MS.gene73500.t1.exon6;Parent=MS.gene73500.t1 |
| chr5.2 | CDS | 78677539 | 78677617 | 78677539 | ID=cds.MS.gene73500.t1;Parent=MS.gene73500.t1 |
| chr5.2 | exon | 78676840 | 78676878 | 78676840 | ID=MS.gene73500.t1.exon7;Parent=MS.gene73500.t1 |
| chr5.2 | CDS | 78676840 | 78676878 | 78676840 | ID=cds.MS.gene73500.t1;Parent=MS.gene73500.t1 |
| chr5.2 | exon | 78676641 | 78676749 | 78676641 | ID=MS.gene73500.t1.exon8;Parent=MS.gene73500.t1 |
| chr5.2 | CDS | 78676641 | 78676749 | 78676641 | ID=cds.MS.gene73500.t1;Parent=MS.gene73500.t1 |
| chr5.2 | exon | 78676426 | 78676544 | 78676426 | ID=MS.gene73500.t1.exon9;Parent=MS.gene73500.t1 |
| chr5.2 | CDS | 78676426 | 78676544 | 78676426 | ID=cds.MS.gene73500.t1;Parent=MS.gene73500.t1 |
| chr5.2 | exon | 78676098 | 78676214 | 78676098 | ID=MS.gene73500.t1.exon10;Parent=MS.gene73500.t1 |
| chr5.2 | CDS | 78676098 | 78676214 | 78676098 | ID=cds.MS.gene73500.t1;Parent=MS.gene73500.t1 |
| chr5.2 | exon | 78675207 | 78675602 | 78675207 | ID=MS.gene73500.t1.exon11;Parent=MS.gene73500.t1 |
| chr5.2 | CDS | 78675207 | 78675602 | 78675207 | ID=cds.MS.gene73500.t1;Parent=MS.gene73500.t1 |
| Gene Sequence |
| Protein sequence |
