Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene028300.t1 | XP_003608503.1 | 81.9 | 701 | 75 | 3 | 44 | 701 | 46 | 737 | 6.50E-220 | 773.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene028300.t1 | O74828 | 28.0 | 721 | 394 | 14 | 38 | 678 | 7 | 682 | 1.4e-40 | 169.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene028300.t1 | G7JDZ9 | 81.9 | 701 | 75 | 3 | 44 | 701 | 46 | 737 | 4.7e-220 | 773.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene028300.t1 | MTR_4g096820 | 87.802 | 746 | 37 | 5 | 1 | 701 | 1 | 737 | 0.0 | 1068 |
| MS.gene028300.t1 | MTR_4g073330 | 50.663 | 679 | 263 | 23 | 45 | 701 | 24 | 652 | 0.0 | 531 |
| MS.gene028300.t1 | MTR_3g107350 | 50.164 | 305 | 89 | 14 | 402 | 697 | 2 | 252 | 1.49e-54 | 187 |
| MS.gene028300.t1 | MTR_3g107330 | 60.377 | 106 | 39 | 2 | 262 | 367 | 55 | 157 | 3.13e-35 | 133 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene028300.t1 | AT3G01160 | 51.699 | 559 | 205 | 17 | 151 | 692 | 181 | 691 | 1.44e-142 | 434 |
Find 143 sgRNAs with CRISPR-Local
Find 264 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAATCTTTGTTTGATGCTTT+GGG | 0.189744 | 4.2:-17448713 | None:intergenic |
| GCAATCTTTGTTTGATGCTT+TGG | 0.233794 | 4.2:-17448714 | None:intergenic |
| TTCTTCTTCTTCTTAATATC+AGG | 0.236398 | 4.2:-17451576 | None:intergenic |
| GAAATCAAAGCAAGATAAAT+TGG | 0.239661 | 4.2:+17452423 | MS.gene028300:CDS |
| CTGCTTCTGTGCCAGCTGCC+TGG | 0.262136 | 4.2:-17452278 | None:intergenic |
| TAAATTGGAGTTATCATCTT+TGG | 0.267442 | 4.2:+17452438 | MS.gene028300:CDS |
| AGATATAAGCAAACATATTA+TGG | 0.278395 | 4.2:+17451374 | MS.gene028300:CDS |
| ATAAACTATACCTGAATTTC+AGG | 0.285468 | 4.2:-17449113 | None:intergenic |
| CCACCGATCCACAATTTAAA+AGG | 0.293286 | 4.2:+17451874 | MS.gene028300:CDS |
| ACTATTTATCCAACCGAGTT+TGG | 0.299625 | 4.2:+17449611 | MS.gene028300:CDS |
| TAGGCTGGCTGTTGTTAATA+TGG | 0.299951 | 4.2:+17449404 | MS.gene028300:CDS |
| ATGAATGAGGAGGAAGTTAA+AGG | 0.319405 | 4.2:+17449644 | MS.gene028300:CDS |
| GAAGACAATTGTGTTTCTTT+CGG | 0.328663 | 4.2:-17452349 | None:intergenic |
| CATCGAATCCACTTGACTTA+AGG | 0.335239 | 4.2:+17450487 | MS.gene028300:CDS |
| TCTTTGTTCTCGTAGTTTGC+AGG | 0.342246 | 4.2:-17450643 | None:intergenic |
| TTTATCAGACTTCTTCGAAT+TGG | 0.349081 | 4.2:-17448610 | None:intergenic |
| CATCGCAATGGGATCCAAAA+AGG | 0.357185 | 4.2:+17448512 | None:intergenic |
| GAGCTCTTCTTTGCTTGCTT+TGG | 0.365529 | 4.2:-17451658 | None:intergenic |
| TGGCTACCCCATCCATATCT+TGG | 0.367484 | 4.2:-17451638 | None:intergenic |
| AAGGAGAAGGGTGGGGAAGA+AGG | 0.368948 | 4.2:+17452388 | MS.gene028300:CDS |
| GCGAAACCGGAGATTGATAA+TGG | 0.375886 | 4.2:+17448966 | MS.gene028300:CDS |
| AGATCATAAGCTCCAAGATA+TGG | 0.384646 | 4.2:+17451626 | MS.gene028300:CDS |
| GGATCATCAAATGCATTGTT+TGG | 0.388107 | 4.2:-17451810 | None:intergenic |
| AGATGATGATGCCATGGATA+TGG | 0.388730 | 4.2:+17451326 | MS.gene028300:CDS |
| ACAGTAAAGTTGAACTTACT+TGG | 0.391491 | 4.2:+17450689 | MS.gene028300:CDS |
| AGAGGATGAACCTGAAATTC+AGG | 0.394746 | 4.2:+17449103 | MS.gene028300:CDS |
| AAGGTTTATTCCAGACGATA+TGG | 0.401282 | 4.2:+17450506 | MS.gene028300:CDS |
| ATCTTGCAAACCTGTATTGA+AGG | 0.406255 | 4.2:-17451355 | None:intergenic |
| CGCCGTGTATGCCAGGCAGC+TGG | 0.411298 | 4.2:+17452267 | MS.gene028300:CDS |
| AGGAGAAGGGTGGGGAAGAA+GGG | 0.411300 | 4.2:+17452389 | MS.gene028300:CDS |
| TCACCATCAAATAGAGCAAC+AGG | 0.414563 | 4.2:-17449668 | None:intergenic |
| CCTCCTCATTCATACGTTGA+AGG | 0.416581 | 4.2:-17449634 | None:intergenic |
| GGGCCTGTTGCTCTATTTGA+TGG | 0.419143 | 4.2:+17449665 | MS.gene028300:CDS |
| CAATTGTCTTCTGATGGTTC+TGG | 0.419907 | 4.2:+17452361 | MS.gene028300:CDS |
| TATTGACATCAGAGGATAGC+TGG | 0.422896 | 4.2:-17452492 | None:intergenic |
| AGTTCATTAGCCCCACCTAA+TGG | 0.423520 | 4.2:+17449572 | MS.gene028300:CDS |
| TCTTTGTCATTACTGTGTAA+TGG | 0.425826 | 4.2:-17448633 | None:intergenic |
| ACCGATTTGACCAGTCCATT+AGG | 0.435915 | 4.2:-17449587 | None:intergenic |
| GTCTGAAGAGAGCGGTGATT+CGG | 0.446713 | 4.2:+17448995 | MS.gene028300:CDS |
| CAAACATATTATGGAAAAGA+AGG | 0.449002 | 4.2:+17451383 | MS.gene028300:CDS |
| ACCTCTGATGCAACATCCTT+AGG | 0.449293 | 4.2:-17450543 | None:intergenic |
| GCAGGAGCGCCGTGTATGCC+AGG | 0.451654 | 4.2:+17452260 | MS.gene028300:intron |
| GAAAATCACAATTTAAGAAA+AGG | 0.454669 | 4.2:+17452527 | MS.gene028300:CDS |
| GAAAGTTAAGAATGCGAAAC+CGG | 0.457632 | 4.2:+17448953 | MS.gene028300:CDS |
| ACCTAATGGACTGGTCAAAT+CGG | 0.462020 | 4.2:+17449586 | MS.gene028300:CDS |
| GATGACAAGGGGACAGGTAC+TGG | 0.470311 | 4.2:+17451696 | MS.gene028300:CDS |
| AGAACCACGACGACAACAAA+GGG | 0.472013 | 4.2:+17448544 | MS.gene028300:CDS |
| TCAGTTCCATTATCAATCTC+CGG | 0.476957 | 4.2:-17448972 | None:intergenic |
| GTGAAGAATTATCAGTAGAA+AGG | 0.480256 | 4.2:+17452311 | MS.gene028300:CDS |
| GAACAAAGATTTCTATTCTC+GGG | 0.481122 | 4.2:+17450657 | MS.gene028300:CDS |
| AGAACAAAGATTTCTATTCT+CGG | 0.483286 | 4.2:+17450656 | MS.gene028300:CDS |
| CTGGTATGAAGGAGAAGGGT+GGG | 0.492784 | 4.2:+17452380 | MS.gene028300:CDS |
| TTCTGATGGTTCTGGTATGA+AGG | 0.495916 | 4.2:+17452369 | MS.gene028300:CDS |
| ATGGAGGTGACCTTCAATAC+AGG | 0.496342 | 4.2:+17451345 | MS.gene028300:CDS |
| GCTGGCACAGAAGCAGCAGA+AGG | 0.499989 | 4.2:+17452285 | MS.gene028300:CDS |
| GGGTTTACCTCGCTTATCGA+CGG | 0.500012 | 4.2:-17448796 | None:intergenic |
| GAAGAACAATGGCAAGGGTA+AGG | 0.500977 | 4.2:+17448578 | MS.gene028300:CDS |
| TGCCAGCTGCCTGGCATACA+CGG | 0.501362 | 4.2:-17452269 | None:intergenic |
| ATAGCTGGCTCAGTTGGAAA+TGG | 0.501819 | 4.2:+17451176 | MS.gene028300:intron |
| ATTGTGATAGCTGGCTCAGT+TGG | 0.502360 | 4.2:+17451170 | MS.gene028300:intron |
| GATGTCAATACAAAGAAAGC+TGG | 0.502558 | 4.2:+17452505 | MS.gene028300:CDS |
| TGTTTGAATTCCATATCGTC+TGG | 0.504264 | 4.2:-17450516 | None:intergenic |
| GAAACACAATTGTCTTCTGA+TGG | 0.505036 | 4.2:+17452355 | MS.gene028300:CDS |
| TGAAGAATTATCAGTAGAAA+GGG | 0.505273 | 4.2:+17452312 | MS.gene028300:CDS |
| TGAATGAGGAGGAAGTTAAA+GGG | 0.505616 | 4.2:+17449645 | MS.gene028300:CDS |
| GGGGACAGGTACTGGTCTCA+AGG | 0.508304 | 4.2:+17451704 | MS.gene028300:CDS |
| TGATTCGGAGGCTGATGCTA+TGG | 0.508685 | 4.2:+17449010 | MS.gene028300:CDS |
| GCGGAAATTCACTGACGAGC+AGG | 0.510238 | 4.2:+17450747 | MS.gene028300:CDS |
| GGTTTACCTCGCTTATCGAC+GGG | 0.511757 | 4.2:-17448795 | None:intergenic |
| AATCTTTGTTTGATGCTTTG+GGG | 0.517406 | 4.2:-17448712 | None:intergenic |
| GACAATAATTCAGATGAAGA+TGG | 0.518699 | 4.2:+17451303 | MS.gene028300:CDS |
| AAGTGATGAAGACGATAGTG+AGG | 0.522461 | 4.2:+17449700 | MS.gene028300:CDS |
| TTATCGACGGGTGCAGAAGA+AGG | 0.525290 | 4.2:-17448783 | None:intergenic |
| ATCTGAATTATTGTCAAGCA+AGG | 0.527250 | 4.2:-17451295 | None:intergenic |
| TGCGTGCATATGAAAAGAGC+AGG | 0.528143 | 4.2:+17449777 | MS.gene028300:CDS |
| GGAATAAACCTTAAGTCAAG+TGG | 0.531217 | 4.2:-17450495 | None:intergenic |
| CACATTTACAAAGAAAATGA+TGG | 0.532366 | 4.2:+17450447 | MS.gene028300:CDS |
| AGATTGAGAAAGAAACTCAT+AGG | 0.533078 | 4.2:+17449385 | MS.gene028300:CDS |
| CGAAGATCCTCGATTTGCCA+TGG | 0.535647 | 4.2:+17448662 | MS.gene028300:CDS |
| TTTGTAAATGTGATCTGCTG+TGG | 0.536863 | 4.2:-17450436 | None:intergenic |
| TCCTAAGGATGTTGCATCAG+AGG | 0.537358 | 4.2:+17450542 | MS.gene028300:CDS |
| AGTTGAACTTACTTGGGATG+AGG | 0.538968 | 4.2:+17450696 | MS.gene028300:CDS |
| CTTGCTGATGACAAGGGGAC+AGG | 0.541409 | 4.2:+17451690 | MS.gene028300:CDS |
| CGTTGAAGGCCAAACTCGGT+TGG | 0.544452 | 4.2:-17449620 | None:intergenic |
| TTCGAGCAAATACTTTGAAG+CGG | 0.548379 | 4.2:+17450728 | MS.gene028300:CDS |
| ATAAGCTCCAAGATATGGAT+GGG | 0.550287 | 4.2:+17451631 | MS.gene028300:CDS |
| GGAATTCAAACAGCCTCCTA+AGG | 0.550469 | 4.2:+17450527 | MS.gene028300:CDS |
| CATAAGCTCCAAGATATGGA+TGG | 0.551085 | 4.2:+17451630 | MS.gene028300:CDS |
| TTCAAAGTATTTGCTCGAAG+AGG | 0.553042 | 4.2:-17450724 | None:intergenic |
| TGGCCTTCAACGTATGAATG+AGG | 0.554948 | 4.2:+17449631 | MS.gene028300:CDS |
| AAGAACCACGACGACAACAA+AGG | 0.555045 | 4.2:+17448543 | MS.gene028300:CDS |
| GCGGAGAATGCTATTGATGA+GGG | 0.557091 | 4.2:+17451780 | MS.gene028300:CDS |
| TGGTATGAAGGAGAAGGGTG+GGG | 0.563117 | 4.2:+17452381 | MS.gene028300:CDS |
| CAGTAAAGTTGAACTTACTT+GGG | 0.565191 | 4.2:+17450690 | MS.gene028300:CDS |
| ATCTTTGTTTGATGCTTTGG+GGG | 0.565921 | 4.2:-17448711 | None:intergenic |
| ATTTGACCAGTCCATTAGGT+GGG | 0.566867 | 4.2:-17449583 | None:intergenic |
| CTGGCACAGAAGCAGCAGAA+GGG | 0.567081 | 4.2:+17452286 | MS.gene028300:CDS |
| TGGCTGTTGTTAATATGGAC+TGG | 0.567725 | 4.2:+17449409 | MS.gene028300:CDS |
| TGAGAAAGAAACTCATAGGC+TGG | 0.567983 | 4.2:+17449389 | MS.gene028300:CDS |
| GGGACAGGTACTGGTCTCAA+GGG | 0.570096 | 4.2:+17451705 | MS.gene028300:CDS |
| TCTTCCCTTTGTTGTCGTCG+TGG | 0.570184 | 4.2:-17448548 | None:intergenic |
| CATACGTTGAAGGCCAAACT+CGG | 0.576188 | 4.2:-17449624 | None:intergenic |
| ATCATGAAAATCTTCTTCAT+CGG | 0.577014 | 4.2:-17449732 | None:intergenic |
| GGTTCTGGTATGAAGGAGAA+GGG | 0.577877 | 4.2:+17452376 | MS.gene028300:CDS |
| ATTAGCCCCACCTAATGGAC+TGG | 0.582985 | 4.2:+17449577 | MS.gene028300:CDS |
| ATTACACAGTAATGACAAAG+AGG | 0.586020 | 4.2:+17448635 | MS.gene028300:CDS |
| TTTCTTTGTATTGACATCAG+AGG | 0.587167 | 4.2:-17452500 | None:intergenic |
| GGCGGAGAATGCTATTGATG+AGG | 0.588252 | 4.2:+17451779 | MS.gene028300:CDS |
| TAAAGAAATAGATATTGATA+CGG | 0.588626 | 4.2:+17449046 | MS.gene028300:CDS |
| GAAGATGAAGAACAATGGCA+AGG | 0.589574 | 4.2:+17448572 | MS.gene028300:CDS |
| TCTGGTATGAAGGAGAAGGG+TGG | 0.592849 | 4.2:+17452379 | MS.gene028300:CDS |
| GAAGGTCACCTCCATATCCA+TGG | 0.597313 | 4.2:-17451337 | None:intergenic |
| GATTTGACCAGTCCATTAGG+TGG | 0.602078 | 4.2:-17449584 | None:intergenic |
| ACTGTTGCTTGCTGATGACA+AGG | 0.603264 | 4.2:+17451683 | MS.gene028300:CDS |
| TGAAGAGAGCGGTGATTCGG+AGG | 0.603835 | 4.2:+17448998 | MS.gene028300:CDS |
| TTTGACCAGTCCATTAGGTG+GGG | 0.605201 | 4.2:-17449582 | None:intergenic |
| TCTGATGCAACATCCTTAGG+AGG | 0.610046 | 4.2:-17450540 | None:intergenic |
| AAGATGAAGAACAATGGCAA+GGG | 0.611817 | 4.2:+17448573 | MS.gene028300:CDS |
| CATATGAAAAGAGCAGGATG+AGG | 0.614560 | 4.2:+17449783 | MS.gene028300:CDS |
| AGATGACTTCTTCATTGATG+AGG | 0.615496 | 4.2:+17451551 | MS.gene028300:CDS |
| AACTCTTGTGAGTGAACATG+CGG | 0.617686 | 4.2:-17448755 | None:intergenic |
| TGGTTCTGGTATGAAGGAGA+AGG | 0.619698 | 4.2:+17452375 | MS.gene028300:CDS |
| AAGAAGAAGATGAAGAACAA+TGG | 0.630023 | 4.2:+17448567 | MS.gene028300:CDS |
| ATTGATACGGATACTGATGA+TGG | 0.633028 | 4.2:+17449059 | MS.gene028300:CDS |
| ATTTAAGAAAAGGAAGCACT+AGG | 0.633678 | 4.2:+17452537 | MS.gene028300:CDS |
| AGATGGAGATGATGATGCCA+TGG | 0.633714 | 4.2:+17451320 | MS.gene028300:CDS |
| TGATGAGAACGATTCTGAAG+AGG | 0.644883 | 4.2:+17449085 | MS.gene028300:CDS |
| TGTTGCTTGCTGATGACAAG+GGG | 0.651064 | 4.2:+17451685 | MS.gene028300:CDS |
| GTGTGAACCATGGCAAATCG+AGG | 0.655246 | 4.2:-17448669 | None:intergenic |
| CAGTTTGGGAAGAATATCTG+AGG | 0.657281 | 4.2:+17451421 | MS.gene028300:CDS |
| TAAGCTCCAAGATATGGATG+GGG | 0.662936 | 4.2:+17451632 | MS.gene028300:CDS |
| GAGTGATAGTGATGATAGTG+AGG | 0.664566 | 4.2:+17451221 | MS.gene028300:CDS |
| CCTTCAACGTATGAATGAGG+AGG | 0.665822 | 4.2:+17449634 | MS.gene028300:CDS |
| ACGTGGATCAGTGTGAACCA+TGG | 0.669461 | 4.2:-17448679 | None:intergenic |
| CGGAGAATGCTATTGATGAG+GGG | 0.677097 | 4.2:+17451781 | MS.gene028300:CDS |
| TCTGCACCCGTCGATAAGCG+AGG | 0.680086 | 4.2:+17448789 | MS.gene028300:CDS |
| CTGTTGCTTGCTGATGACAA+GGG | 0.682674 | 4.2:+17451684 | MS.gene028300:CDS |
| TGATGATGCCATGGATATGG+AGG | 0.684743 | 4.2:+17451329 | MS.gene028300:CDS |
| TATGGACTGGCGGTATGTGA+AGG | 0.687556 | 4.2:+17449422 | MS.gene028300:CDS |
| GGAACTGAGTCTGAAGAGAG+CGG | 0.689169 | 4.2:+17448987 | MS.gene028300:CDS |
| CTGTTGTTAATATGGACTGG+CGG | 0.700073 | 4.2:+17449412 | MS.gene028300:CDS |
| GAGAAGATAGATGCAAAACG+TGG | 0.707824 | 4.2:-17451831 | None:intergenic |
| ATAACAATGAGACTGATGAG+CGG | 0.723456 | 4.2:+17451244 | MS.gene028300:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTCTTATTATTAGTAATATT+AGG | + | chr4.2:17449204-17449223 | MS.gene028300:intron | 10.0% |
| !!! | AAATATTGAAAATTATTTCT+TGG | + | chr4.2:17452016-17452035 | MS.gene028300:intron | 10.0% |
| !!! | ACAAAAATTAAATTTTAGAA+AGG | - | chr4.2:17452235-17452254 | None:intergenic | 10.0% |
| !!! | GTAAAATAATTTTAATTGAT+CGG | + | chr4.2:17449251-17449270 | MS.gene028300:intron | 10.0% |
| !! | AAATGACTAAATAAAAAATG+AGG | - | chr4.2:17450869-17450888 | None:intergenic | 15.0% |
| !! | TAAAGAAATAGATATTGATA+CGG | + | chr4.2:17449046-17449065 | MS.gene028300:CDS | 15.0% |
| !! | TAATAATACTTAGAGTTTAA+CGG | - | chr4.2:17449340-17449359 | None:intergenic | 15.0% |
| !! | TTAGTAATATTAGGATTTAA+AGG | + | chr4.2:17449213-17449232 | MS.gene028300:intron | 15.0% |
| !! | TTATAAATGTGAATACTATT+TGG | - | chr4.2:17450892-17450911 | None:intergenic | 15.0% |
| !!! | ATAAAATACCTTTTAAATTG+TGG | - | chr4.2:17451885-17451904 | None:intergenic | 15.0% |
| !!! | TACTTATTATCTTTTTTTCT+AGG | - | chr4.2:17451270-17451289 | None:intergenic | 15.0% |
| !!! | TATAATCTGAAGTTTAAAAA+AGG | + | chr4.2:17451729-17451748 | MS.gene028300:CDS | 15.0% |
| !!! | TATAGTTTATGCATTTTATT+TGG | + | chr4.2:17449126-17449145 | MS.gene028300:intron | 15.0% |
| !! | AATAATACTTAGAGTTTAAC+GGG | - | chr4.2:17449339-17449358 | None:intergenic | 20.0% |
| !! | AGATATAAGCAAACATATTA+TGG | + | chr4.2:17451374-17451393 | MS.gene028300:CDS | 20.0% |
| !! | ATAAAAAATCAAGAACAGTT+TGG | + | chr4.2:17451406-17451425 | MS.gene028300:CDS | 20.0% |
| !! | CTCTAAGTATTATTATGATA+TGG | + | chr4.2:17449345-17449364 | MS.gene028300:intron | 20.0% |
| !! | GAAAATCACAATTTAAGAAA+AGG | + | chr4.2:17452527-17452546 | MS.gene028300:CDS | 20.0% |
| !! | TAAAAAATCAAGAACAGTTT+GGG | + | chr4.2:17451407-17451426 | MS.gene028300:CDS | 20.0% |
| !! | TGATATAATGAATGGTTAAA+GGG | - | chr4.2:17449961-17449980 | None:intergenic | 20.0% |
| !! | TTAAACCTTGATATAATGAA+TGG | - | chr4.2:17449969-17449988 | None:intergenic | 20.0% |
| !! | TTGATATAATGAATGGTTAA+AGG | - | chr4.2:17449962-17449981 | None:intergenic | 20.0% |
| !! | TTTAACCATTCATTATATCA+AGG | + | chr4.2:17449961-17449980 | MS.gene028300:intron | 20.0% |
| !! | TTTATATATATGCTGTATTG+TGG | + | chr4.2:17450574-17450593 | MS.gene028300:intron | 20.0% |
| !!! | AATAATTTTAATTGATCGGT+TGG | + | chr4.2:17449255-17449274 | MS.gene028300:intron | 20.0% |
| !!! | ATTGTGGATTATAATAGAAT+AGG | + | chr4.2:17450590-17450609 | MS.gene028300:intron | 20.0% |
| !!! | ATTTAATTTTTGTTGATTGC+AGG | + | chr4.2:17452242-17452261 | MS.gene028300:intron | 20.0% |
| !!! | GTGTTGATAAATTTATATCT+TGG | + | chr4.2:17450800-17450819 | MS.gene028300:intron | 20.0% |
| ! | ACATCTGTACTAGTTATTAA+GGG | - | chr4.2:17451010-17451029 | None:intergenic | 25.0% |
| ! | AGAAAAAAAACTTAAAGCTC+TGG | - | chr4.2:17451140-17451159 | None:intergenic | 25.0% |
| ! | AGAACAAAGATTTCTATTCT+CGG | + | chr4.2:17450656-17450675 | MS.gene028300:CDS | 25.0% |
| ! | AGAGTTTACTACATGAAAAT+AGG | - | chr4.2:17452204-17452223 | None:intergenic | 25.0% |
| ! | AGTATTATTATGATATGGAC+AGG | + | chr4.2:17449350-17449369 | MS.gene028300:intron | 25.0% |
| ! | ATAAACTATACCTGAATTTC+AGG | - | chr4.2:17449116-17449135 | None:intergenic | 25.0% |
| ! | ATCATGAAAATCTTCTTCAT+CGG | - | chr4.2:17449735-17449754 | None:intergenic | 25.0% |
| ! | CAAACATATTATGGAAAAGA+AGG | + | chr4.2:17451383-17451402 | MS.gene028300:CDS | 25.0% |
| ! | CACATTTACAAAGAAAATGA+TGG | + | chr4.2:17450447-17450466 | MS.gene028300:CDS | 25.0% |
| ! | GAAAAAAAACTTAAAGCTCT+GGG | - | chr4.2:17451139-17451158 | None:intergenic | 25.0% |
| ! | GAAATCAAAGCAAGATAAAT+TGG | + | chr4.2:17452423-17452442 | MS.gene028300:CDS | 25.0% |
| ! | GAGTTAGACAAGATAATATT+GGG | - | chr4.2:17452094-17452113 | None:intergenic | 25.0% |
| ! | TAAATTGGAGTTATCATCTT+TGG | + | chr4.2:17452438-17452457 | MS.gene028300:CDS | 25.0% |
| ! | TAACAAAAAAAGACAAGTAC+AGG | - | chr4.2:17451035-17451054 | None:intergenic | 25.0% |
| ! | TACATCTGTACTAGTTATTA+AGG | - | chr4.2:17451011-17451030 | None:intergenic | 25.0% |
| ! | TATACAAGTTTCTTGAATAG+CGG | - | chr4.2:17452179-17452198 | None:intergenic | 25.0% |
| ! | TCTTCGTCATTACTATAAAA+TGG | + | chr4.2:17448848-17448867 | MS.gene028300:intron | 25.0% |
| ! | TGAAGAATTATCAGTAGAAA+GGG | + | chr4.2:17452312-17452331 | MS.gene028300:CDS | 25.0% |
| ! | TGAGTTAGACAAGATAATAT+TGG | - | chr4.2:17452095-17452114 | None:intergenic | 25.0% |
| ! | TTAATTGTTATGTATCTGTG+TGG | + | chr4.2:17451052-17451071 | MS.gene028300:intron | 25.0% |
| ! | TTCTTCTTCTTCTTAATATC+AGG | - | chr4.2:17451579-17451598 | None:intergenic | 25.0% |
| ! | TTGTGATATATTTGCTTGAA+TGG | + | chr4.2:17449831-17449850 | MS.gene028300:intron | 25.0% |
| !! | AAAATTATTTCTTGGCATGA+TGG | + | chr4.2:17452024-17452043 | MS.gene028300:intron | 25.0% |
| !! | AGATTCAAGTTAGAAAAACA+TGG | - | chr4.2:17450365-17450384 | None:intergenic | 25.0% |
| !! | ATACCTTTTAAATTGTGGAT+CGG | - | chr4.2:17451880-17451899 | None:intergenic | 25.0% |
| !! | ATCAGCGTGTAAAATATTTT+CGG | - | chr4.2:17450010-17450029 | None:intergenic | 25.0% |
| !! | TTTTTACACTGAGATCTAAT+AGG | - | chr4.2:17449300-17449319 | None:intergenic | 25.0% |
| !!! | ATTTGTTATGTTGCTAAGAT+TGG | + | chr4.2:17452123-17452142 | MS.gene028300:intron | 25.0% |
| !!! | GACTTAGCTAAGAAATTTTT+TGG | - | chr4.2:17452066-17452085 | None:intergenic | 25.0% |
| !!! | TCTTTGTCATTTTTACTTTC+TGG | - | chr4.2:17451609-17451628 | None:intergenic | 25.0% |
| !!! | TGTTATTACGCTTTGTTTTA+TGG | + | chr4.2:17450207-17450226 | MS.gene028300:intron | 25.0% |
| !!! | TTGTGTTTTGTTGTGTTTTT+TGG | + | chr4.2:17449519-17449538 | MS.gene028300:intron | 25.0% |
| AAGAAGAAGATGAAGAACAA+TGG | + | chr4.2:17448567-17448586 | MS.gene028300:CDS | 30.0% | |
| AATATGAGTGACATGTGATA+CGG | - | chr4.2:17450287-17450306 | None:intergenic | 30.0% | |
| ACAGTAAAGTTGAACTTACT+TGG | + | chr4.2:17450689-17450708 | MS.gene028300:CDS | 30.0% | |
| AGATTGAGAAAGAAACTCAT+AGG | + | chr4.2:17449385-17449404 | MS.gene028300:CDS | 30.0% | |
| ATACAAGTTTCTTGAATAGC+GGG | - | chr4.2:17452178-17452197 | None:intergenic | 30.0% | |
| ATCTGAATTATTGTCAAGCA+AGG | - | chr4.2:17451298-17451317 | None:intergenic | 30.0% | |
| ATTACACAGTAATGACAAAG+AGG | + | chr4.2:17448635-17448654 | MS.gene028300:CDS | 30.0% | |
| ATTCTAGATCATAAGAAAGG+AGG | - | chr4.2:17450160-17450179 | None:intergenic | 30.0% | |
| CAGTAAAGTTGAACTTACTT+GGG | + | chr4.2:17450690-17450709 | MS.gene028300:CDS | 30.0% | |
| CTGAAGTTTAAAAAAGGCAA+GGG | + | chr4.2:17451735-17451754 | MS.gene028300:CDS | 30.0% | |
| GAACAAAGATTTCTATTCTC+GGG | + | chr4.2:17450657-17450676 | MS.gene028300:CDS | 30.0% | |
| GAAGACAATTGTGTTTCTTT+CGG | - | chr4.2:17452352-17452371 | None:intergenic | 30.0% | |
| GACAATAATTCAGATGAAGA+TGG | + | chr4.2:17451303-17451322 | MS.gene028300:CDS | 30.0% | |
| GTGAAGAATTATCAGTAGAA+AGG | + | chr4.2:17452311-17452330 | MS.gene028300:CDS | 30.0% | |
| GTTATTAAGGGACAAAAGAA+TGG | - | chr4.2:17450998-17451017 | None:intergenic | 30.0% | |
| TATCTTGGAAAAATCTTGTG+TGG | + | chr4.2:17450815-17450834 | MS.gene028300:intron | 30.0% | |
| TCAAGCAAATATATCACAAC+AGG | - | chr4.2:17449830-17449849 | None:intergenic | 30.0% | |
| TCATTACTATAAAATGGACG+AGG | + | chr4.2:17448854-17448873 | MS.gene028300:intron | 30.0% | |
| TCTTTGTCATTACTGTGTAA+TGG | - | chr4.2:17448636-17448655 | None:intergenic | 30.0% | |
| TTATGTTGCTAAGATTGGAA+TGG | + | chr4.2:17452128-17452147 | MS.gene028300:intron | 30.0% | |
| TTTATCAGACTTCTTCGAAT+TGG | - | chr4.2:17448613-17448632 | None:intergenic | 30.0% | |
| TTTATGGAGATTATACTTCC+CGG | + | chr4.2:17450223-17450242 | MS.gene028300:intron | 30.0% | |
| ! | AAACACAATTGACTCACATT+AGG | - | chr4.2:17449461-17449480 | None:intergenic | 30.0% |
| ! | AATCTTTGTTTGATGCTTTG+GGG | - | chr4.2:17448715-17448734 | None:intergenic | 30.0% |
| ! | CAATCTTTGTTTGATGCTTT+GGG | - | chr4.2:17448716-17448735 | None:intergenic | 30.0% |
| ! | GGATAATGATGATGAATTAG+AGG | + | chr4.2:17448923-17448942 | MS.gene028300:intron | 30.0% |
| ! | TATCAAATTTTATGCTGCGA+TGG | + | chr4.2:17450915-17450934 | MS.gene028300:intron | 30.0% |
| ! | TCTGAAGTTTAAAAAAGGCA+AGG | + | chr4.2:17451734-17451753 | MS.gene028300:CDS | 30.0% |
| ! | TGGAGTTCAAAGATTTTGTT+TGG | + | chr4.2:17449484-17449503 | MS.gene028300:intron | 30.0% |
| ! | TTCAAGTTAGAAAAACATGG+TGG | - | chr4.2:17450362-17450381 | None:intergenic | 30.0% |
| ! | TTTTCAACTTGAATCAAGCA+TGG | + | chr4.2:17449886-17449905 | MS.gene028300:intron | 30.0% |
| !! | ATTTAAGAAAAGGAAGCACT+AGG | + | chr4.2:17452537-17452556 | MS.gene028300:CDS | 30.0% |
| !!! | ATGCTTTGATTTGTTTTTCC+TGG | - | chr4.2:17451469-17451488 | None:intergenic | 30.0% |
| !!! | GTTCTTCTTGTTTTCCTTTT+TGG | - | chr4.2:17448529-17448548 | None:intergenic | 30.0% |
| !!! | TTGTTGTGTTTTTTGGTTGT+AGG | + | chr4.2:17449526-17449545 | MS.gene028300:intron | 30.0% |
| AAAAAAGGCAAGGGCAAAAA+AGG | + | chr4.2:17451744-17451763 | MS.gene028300:CDS | 35.0% | |
| AAAATGAGGTAACTACTCAG+AGG | - | chr4.2:17450855-17450874 | None:intergenic | 35.0% | |
| AAGATGAAGAACAATGGCAA+GGG | + | chr4.2:17448573-17448592 | MS.gene028300:CDS | 35.0% | |
| AAGGTTTATTCCAGACGATA+TGG | + | chr4.2:17450506-17450525 | MS.gene028300:CDS | 35.0% | |
| ACTATTTATCCAACCGAGTT+TGG | + | chr4.2:17449611-17449630 | MS.gene028300:CDS | 35.0% | |
| AGATCATAAGCTCCAAGATA+TGG | + | chr4.2:17451626-17451645 | MS.gene028300:CDS | 35.0% | |
| AGATGACTTCTTCATTGATG+AGG | + | chr4.2:17451551-17451570 | MS.gene028300:CDS | 35.0% | |
| ATAACAATGAGACTGATGAG+CGG | + | chr4.2:17451244-17451263 | MS.gene028300:CDS | 35.0% | |
| ATAAGCTCCAAGATATGGAT+GGG | + | chr4.2:17451631-17451650 | MS.gene028300:CDS | 35.0% | |
| ATATGAGTGACATGTGATAC+GGG | - | chr4.2:17450286-17450305 | None:intergenic | 35.0% | |
| ATCTTGCAAACCTGTATTGA+AGG | - | chr4.2:17451358-17451377 | None:intergenic | 35.0% | |
| ATGAATGAGGAGGAAGTTAA+AGG | + | chr4.2:17449644-17449663 | MS.gene028300:CDS | 35.0% | |
| ATTATGATATGGACAGGAAG+AGG | + | chr4.2:17449356-17449375 | MS.gene028300:intron | 35.0% | |
| ATTGATACGGATACTGATGA+TGG | + | chr4.2:17449059-17449078 | MS.gene028300:CDS | 35.0% | |
| CGCATTCTAGATCATAAGAA+AGG | - | chr4.2:17450163-17450182 | None:intergenic | 35.0% | |
| GAAACACAATTGTCTTCTGA+TGG | + | chr4.2:17452355-17452374 | MS.gene028300:CDS | 35.0% | |
| GAAAGGAGGATAACAAAGAT+AGG | - | chr4.2:17450146-17450165 | None:intergenic | 35.0% | |
| GAAAGTTAAGAATGCGAAAC+CGG | + | chr4.2:17448953-17448972 | MS.gene028300:CDS | 35.0% | |
| GAATCTTTATCTTGCTCTCT+AGG | + | chr4.2:17450379-17450398 | MS.gene028300:intron | 35.0% | |
| GACAATATCAGCGTGTAAAA+TGG | - | chr4.2:17450016-17450035 | None:intergenic | 35.0% | |
| GCACGTCAAAATAGTAAACA+TGG | - | chr4.2:17450319-17450338 | None:intergenic | 35.0% | |
| GGAATAAACCTTAAGTCAAG+TGG | - | chr4.2:17450498-17450517 | None:intergenic | 35.0% | |
| GGATCATCAAATGCATTGTT+TGG | - | chr4.2:17451813-17451832 | None:intergenic | 35.0% | |
| GTGAGTCAATTGTGTTTATC+TGG | + | chr4.2:17449464-17449483 | MS.gene028300:intron | 35.0% | |
| TAGAAAAACATGGTGGTAAG+AGG | - | chr4.2:17450355-17450374 | None:intergenic | 35.0% | |
| TCAGTTCCATTATCAATCTC+CGG | - | chr4.2:17448975-17448994 | None:intergenic | 35.0% | |
| TGAATGAGGAGGAAGTTAAA+GGG | + | chr4.2:17449645-17449664 | MS.gene028300:CDS | 35.0% | |
| TGTTTGAATTCCATATCGTC+TGG | - | chr4.2:17450519-17450538 | None:intergenic | 35.0% | |
| TTCCTTTCTATTGTGATAGC+TGG | + | chr4.2:17451161-17451180 | MS.gene028300:intron | 35.0% | |
| TTTGTAAATGTGATCTGCTG+TGG | - | chr4.2:17450439-17450458 | None:intergenic | 35.0% | |
| ! | ATAGCGGGAAGTACAATTAT+AGG | - | chr4.2:17452163-17452182 | None:intergenic | 35.0% |
| ! | ATCTTTGTTTGATGCTTTGG+GGG | - | chr4.2:17448714-17448733 | None:intergenic | 35.0% |
| ! | CTCTAGGTACTATTTTGCTT+TGG | + | chr4.2:17450395-17450414 | MS.gene028300:intron | 35.0% |
| ! | CTTTTAAATTGTGGATCGGT+GGG | - | chr4.2:17451876-17451895 | None:intergenic | 35.0% |
| ! | GCAATCTTTGTTTGATGCTT+TGG | - | chr4.2:17448717-17448736 | None:intergenic | 35.0% |
| ! | TAGCGGGAAGTACAATTATA+GGG | - | chr4.2:17452162-17452181 | None:intergenic | 35.0% |
| ! | TAGGTACTATTTTGCTTTGG+TGG | + | chr4.2:17450398-17450417 | MS.gene028300:intron | 35.0% |
| ! | TTCAAAGTATTTGCTCGAAG+AGG | - | chr4.2:17450727-17450746 | None:intergenic | 35.0% |
| ! | TTCGAGCAAATACTTTGAAG+CGG | + | chr4.2:17450728-17450747 | MS.gene028300:CDS | 35.0% |
| !! | ATCTTGTGTGGTGTTAGTTT+TGG | + | chr4.2:17450827-17450846 | MS.gene028300:intron | 35.0% |
| !! | TGCGAATTAGCCTTATCTTT+GGG | - | chr4.2:17448819-17448838 | None:intergenic | 35.0% |
| AACATGGTGGTAAGAGGAAA+AGG | - | chr4.2:17450349-17450368 | None:intergenic | 40.0% | |
| AACGTGAGAAAAAGAAAGCC+AGG | + | chr4.2:17451448-17451467 | MS.gene028300:CDS | 40.0% | |
| AACTCTTGTGAGTGAACATG+CGG | - | chr4.2:17448758-17448777 | None:intergenic | 40.0% | |
| AAGTGATGAAGACGATAGTG+AGG | + | chr4.2:17449700-17449719 | MS.gene028300:CDS | 40.0% | |
| ACACGCTGATATTGTCAAGT+GGG | + | chr4.2:17450020-17450039 | MS.gene028300:intron | 40.0% | |
| ACATGGTGGTAAGAGGAAAA+GGG | - | chr4.2:17450348-17450367 | None:intergenic | 40.0% | |
| AGAGGATGAACCTGAAATTC+AGG | + | chr4.2:17449103-17449122 | MS.gene028300:CDS | 40.0% | |
| AGCCAGCTATCACAATAGAA+AGG | - | chr4.2:17451166-17451185 | None:intergenic | 40.0% | |
| AGTAGAACAGAGTAGTGATG+AGG | + | chr4.2:17448899-17448918 | MS.gene028300:intron | 40.0% | |
| AGTTGAACTTACTTGGGATG+AGG | + | chr4.2:17450696-17450715 | MS.gene028300:CDS | 40.0% | |
| ATTATACTTCCCGGAACACA+TGG | + | chr4.2:17450232-17450251 | MS.gene028300:intron | 40.0% | |
| ATTTGACCAGTCCATTAGGT+GGG | - | chr4.2:17449586-17449605 | None:intergenic | 40.0% | |
| CAAAAAAGGCAAGGGCAAAA+AGG | + | chr4.2:17451758-17451777 | MS.gene028300:CDS | 40.0% | |
| CAAAGATAAGGCTAATTCGC+AGG | + | chr4.2:17448818-17448837 | MS.gene028300:intron | 40.0% | |
| CAATTGTCTTCTGATGGTTC+TGG | + | chr4.2:17452361-17452380 | MS.gene028300:CDS | 40.0% | |
| CAGTTTGGGAAGAATATCTG+AGG | + | chr4.2:17451421-17451440 | MS.gene028300:CDS | 40.0% | |
| CATAAGCTCCAAGATATGGA+TGG | + | chr4.2:17451630-17451649 | MS.gene028300:CDS | 40.0% | |
| CATATGAAAAGAGCAGGATG+AGG | + | chr4.2:17449783-17449802 | MS.gene028300:CDS | 40.0% | |
| CATCGAATCCACTTGACTTA+AGG | + | chr4.2:17450487-17450506 | MS.gene028300:CDS | 40.0% | |
| CCACCGATCCACAATTTAAA+AGG | + | chr4.2:17451874-17451893 | MS.gene028300:CDS | 40.0% | |
| GAAGATGAAGAACAATGGCA+AGG | + | chr4.2:17448572-17448591 | MS.gene028300:CDS | 40.0% | |
| GAGAAGATAGATGCAAAACG+TGG | - | chr4.2:17451834-17451853 | None:intergenic | 40.0% | |
| GGAGGATAACAAAGATAGGA+AGG | - | chr4.2:17450142-17450161 | None:intergenic | 40.0% | |
| GTATATGTATGTGCATGGCA+TGG | - | chr4.2:17450960-17450979 | None:intergenic | 40.0% | |
| TAAGCTCCAAGATATGGATG+GGG | + | chr4.2:17451632-17451651 | MS.gene028300:CDS | 40.0% | |
| TACACGCTGATATTGTCAAG+TGG | + | chr4.2:17450019-17450038 | MS.gene028300:intron | 40.0% | |
| TATTGACATCAGAGGATAGC+TGG | - | chr4.2:17452495-17452514 | None:intergenic | 40.0% | |
| TCACCATCAAATAGAGCAAC+AGG | - | chr4.2:17449671-17449690 | None:intergenic | 40.0% | |
| TCACTATTTCCCATGTGTTC+CGG | - | chr4.2:17450245-17450264 | None:intergenic | 40.0% | |
| TGAGAAAGAAACTCATAGGC+TGG | + | chr4.2:17449389-17449408 | MS.gene028300:CDS | 40.0% | |
| TGAGCGTATATGTATGTGCA+TGG | - | chr4.2:17450965-17450984 | None:intergenic | 40.0% | |
| TGGCTGTTGTTAATATGGAC+TGG | + | chr4.2:17449409-17449428 | MS.gene028300:CDS | 40.0% | |
| TTATACTTCCCGGAACACAT+GGG | + | chr4.2:17450233-17450252 | MS.gene028300:intron | 40.0% | |
| ! | AGATGATGATGCCATGGATA+TGG | + | chr4.2:17451326-17451345 | MS.gene028300:CDS | 40.0% |
| ! | AGCGGGAAGTACAATTATAG+GGG | - | chr4.2:17452161-17452180 | None:intergenic | 40.0% |
| ! | CCTTTTAAATTGTGGATCGG+TGG | - | chr4.2:17451877-17451896 | None:intergenic | 40.0% |
| ! | GAGTGATAGTGATGATAGTG+AGG | + | chr4.2:17451221-17451240 | MS.gene028300:CDS | 40.0% |
| ! | TAGGCTGGCTGTTGTTAATA+TGG | + | chr4.2:17449404-17449423 | MS.gene028300:CDS | 40.0% |
| ! | TCTTTGTTCTCGTAGTTTGC+AGG | - | chr4.2:17450646-17450665 | None:intergenic | 40.0% |
| ! | TGATCTAGAATGCGTCTATG+TGG | + | chr4.2:17450169-17450188 | MS.gene028300:intron | 40.0% |
| ! | TGATGAGAACGATTCTGAAG+AGG | + | chr4.2:17449085-17449104 | MS.gene028300:CDS | 40.0% |
| !! | ACCTAATGGACTGGTCAAAT+CGG | + | chr4.2:17449586-17449605 | MS.gene028300:CDS | 40.0% |
| !! | ACTGCTATTTCACTCTGATG+GGG | + | chr4.2:17451972-17451991 | MS.gene028300:intron | 40.0% |
| !! | CACTGCTATTTCACTCTGAT+GGG | + | chr4.2:17451971-17451990 | MS.gene028300:intron | 40.0% |
| !! | CTGCGAATTAGCCTTATCTT+TGG | - | chr4.2:17448820-17448839 | None:intergenic | 40.0% |
| !! | CTGTTGTTAATATGGACTGG+CGG | + | chr4.2:17449412-17449431 | MS.gene028300:CDS | 40.0% |
| !! | TCACTGCTATTTCACTCTGA+TGG | + | chr4.2:17451970-17451989 | MS.gene028300:intron | 40.0% |
| !! | TTCTGATGGTTCTGGTATGA+AGG | + | chr4.2:17452369-17452388 | MS.gene028300:CDS | 40.0% |
| !!! | TGTTTTTTGGTTGTAGGCTG+TGG | + | chr4.2:17449532-17449551 | MS.gene028300:intron | 40.0% |
| AAAAGGCAAGGGCAAAAAGG+CGG | + | chr4.2:17451761-17451780 | MS.gene028300:CDS | 45.0% | |
| AAGAACCACGACGACAACAA+AGG | + | chr4.2:17448543-17448562 | MS.gene028300:CDS | 45.0% | |
| ACCTCTGATGCAACATCCTT+AGG | - | chr4.2:17450546-17450565 | None:intergenic | 45.0% | |
| AGAACAGAGTAGTGATGAGG+AGG | + | chr4.2:17448902-17448921 | MS.gene028300:intron | 45.0% | |
| AGAACCACGACGACAACAAA+GGG | + | chr4.2:17448544-17448563 | MS.gene028300:CDS | 45.0% | |
| AGTTCATTAGCCCCACCTAA+TGG | + | chr4.2:17449572-17449591 | MS.gene028300:CDS | 45.0% | |
| ATGGAGGTGACCTTCAATAC+AGG | + | chr4.2:17451345-17451364 | MS.gene028300:CDS | 45.0% | |
| CACTATTTCCCATGTGTTCC+GGG | - | chr4.2:17450244-17450263 | None:intergenic | 45.0% | |
| CACTCTGATGGGGTAAACTT+GGG | + | chr4.2:17451982-17452001 | MS.gene028300:intron | 45.0% | |
| CATACGTTGAAGGCCAAACT+CGG | - | chr4.2:17449627-17449646 | None:intergenic | 45.0% | |
| CCTCCTCATTCATACGTTGA+AGG | - | chr4.2:17449637-17449656 | None:intergenic | 45.0% | |
| CCTTCAACGTATGAATGAGG+AGG | + | chr4.2:17449634-17449653 | MS.gene028300:CDS | 45.0% | |
| CGGAGAATGCTATTGATGAG+GGG | + | chr4.2:17451781-17451800 | MS.gene028300:CDS | 45.0% | |
| GAAGAACAATGGCAAGGGTA+AGG | + | chr4.2:17448578-17448597 | MS.gene028300:CDS | 45.0% | |
| GAGCTCTTCTTTGCTTGCTT+TGG | - | chr4.2:17451661-17451680 | None:intergenic | 45.0% | |
| GATTTGACCAGTCCATTAGG+TGG | - | chr4.2:17449587-17449606 | None:intergenic | 45.0% | |
| GCATGATGGTTACATTCAGC+TGG | + | chr4.2:17452038-17452057 | MS.gene028300:intron | 45.0% | |
| GCGAAACCGGAGATTGATAA+TGG | + | chr4.2:17448966-17448985 | MS.gene028300:CDS | 45.0% | |
| GCGAGGTAAACCCAAAGATA+AGG | + | chr4.2:17448806-17448825 | MS.gene028300:intron | 45.0% | |
| GCGGAGAATGCTATTGATGA+GGG | + | chr4.2:17451780-17451799 | MS.gene028300:CDS | 45.0% | |
| GGAATTCAAACAGCCTCCTA+AGG | + | chr4.2:17450527-17450546 | MS.gene028300:CDS | 45.0% | |
| GGTAAGAGGAAAAGGGAGAT+GGG | - | chr4.2:17450341-17450360 | None:intergenic | 45.0% | |
| TCACTCTGATGGGGTAAACT+TGG | + | chr4.2:17451981-17452000 | MS.gene028300:intron | 45.0% | |
| TCCTAAGGATGTTGCATCAG+AGG | + | chr4.2:17450542-17450561 | MS.gene028300:CDS | 45.0% | |
| TCTGATGCAACATCCTTAGG+AGG | - | chr4.2:17450543-17450562 | None:intergenic | 45.0% | |
| TGCGTGCATATGAAAAGAGC+AGG | + | chr4.2:17449777-17449796 | MS.gene028300:CDS | 45.0% | |
| TGGCCTTCAACGTATGAATG+AGG | + | chr4.2:17449631-17449650 | MS.gene028300:CDS | 45.0% | |
| TGGTAAGAGGAAAAGGGAGA+TGG | - | chr4.2:17450342-17450361 | None:intergenic | 45.0% | |
| TTTGACCAGTCCATTAGGTG+GGG | - | chr4.2:17449585-17449604 | None:intergenic | 45.0% | |
| ! | ACTGTTGCTTGCTGATGACA+AGG | + | chr4.2:17451683-17451702 | MS.gene028300:CDS | 45.0% |
| ! | AGATGGAGATGATGATGCCA+TGG | + | chr4.2:17451320-17451339 | MS.gene028300:CDS | 45.0% |
| ! | ATAGCTGGCTCAGTTGGAAA+TGG | + | chr4.2:17451176-17451195 | MS.gene028300:intron | 45.0% |
| ! | ATTGTGATAGCTGGCTCAGT+TGG | + | chr4.2:17451170-17451189 | MS.gene028300:intron | 45.0% |
| ! | CTGTTGCTTGCTGATGACAA+GGG | + | chr4.2:17451684-17451703 | MS.gene028300:CDS | 45.0% |
| ! | GCGGGAAGTACAATTATAGG+GGG | - | chr4.2:17452160-17452179 | None:intergenic | 45.0% |
| ! | GGTTCTGGTATGAAGGAGAA+GGG | + | chr4.2:17452376-17452395 | MS.gene028300:CDS | 45.0% |
| ! | TGATGATGCCATGGATATGG+AGG | + | chr4.2:17451329-17451348 | MS.gene028300:CDS | 45.0% |
| ! | TGTTGCTTGCTGATGACAAG+GGG | + | chr4.2:17451685-17451704 | MS.gene028300:CDS | 45.0% |
| !! | ACCGATTTGACCAGTCCATT+AGG | - | chr4.2:17449590-17449609 | None:intergenic | 45.0% |
| !! | TGGTTCTGGTATGAAGGAGA+AGG | + | chr4.2:17452375-17452394 | MS.gene028300:CDS | 45.0% |
| ACGTGGATCAGTGTGAACCA+TGG | - | chr4.2:17448682-17448701 | None:intergenic | 50.0% | |
| AGGCAAGGGCAAAAAAGGCA+AGG | + | chr4.2:17451749-17451768 | MS.gene028300:CDS | 50.0% | |
| CTGGTATGAAGGAGAAGGGT+GGG | + | chr4.2:17452380-17452399 | MS.gene028300:CDS | 50.0% | |
| GAAGGTCACCTCCATATCCA+TGG | - | chr4.2:17451340-17451359 | None:intergenic | 50.0% | |
| GGAACTGAGTCTGAAGAGAG+CGG | + | chr4.2:17448987-17449006 | MS.gene028300:CDS | 50.0% | |
| GGCAAGGGCAAAAAAGGCAA+GGG | + | chr4.2:17451750-17451769 | MS.gene028300:CDS | 50.0% | |
| GGCGGAGAATGCTATTGATG+AGG | + | chr4.2:17451779-17451798 | MS.gene028300:CDS | 50.0% | |
| GGGCCTGTTGCTCTATTTGA+TGG | + | chr4.2:17449665-17449684 | MS.gene028300:CDS | 50.0% | |
| GGGTTTACCTCGCTTATCGA+CGG | - | chr4.2:17448799-17448818 | None:intergenic | 50.0% | |
| GGTTTACCTCGCTTATCGAC+GGG | - | chr4.2:17448798-17448817 | None:intergenic | 50.0% | |
| GTCTGAAGAGAGCGGTGATT+CGG | + | chr4.2:17448995-17449014 | MS.gene028300:CDS | 50.0% | |
| GTGTGAACCATGGCAAATCG+AGG | - | chr4.2:17448672-17448691 | None:intergenic | 50.0% | |
| TCTGGTATGAAGGAGAAGGG+TGG | + | chr4.2:17452379-17452398 | MS.gene028300:CDS | 50.0% | |
| TGGCTACCCCATCCATATCT+TGG | - | chr4.2:17451641-17451660 | None:intergenic | 50.0% | |
| TGGTATGAAGGAGAAGGGTG+GGG | + | chr4.2:17452381-17452400 | MS.gene028300:CDS | 50.0% | |
| TTATCGACGGGTGCAGAAGA+AGG | - | chr4.2:17448786-17448805 | None:intergenic | 50.0% | |
| TTTGGGGGTTCACGAAAACG+TGG | - | chr4.2:17448699-17448718 | None:intergenic | 50.0% | |
| ! | ATTAGCCCCACCTAATGGAC+TGG | + | chr4.2:17449577-17449596 | MS.gene028300:CDS | 50.0% |
| ! | CGAAGATCCTCGATTTGCCA+TGG | + | chr4.2:17448662-17448681 | MS.gene028300:CDS | 50.0% |
| ! | TCTTCCCTTTGTTGTCGTCG+TGG | - | chr4.2:17448551-17448570 | None:intergenic | 50.0% |
| ! | TGATTCGGAGGCTGATGCTA+TGG | + | chr4.2:17449010-17449029 | MS.gene028300:CDS | 50.0% |
| !! | CGGTTGGTCTCTTAACACGA+TGG | + | chr4.2:17449271-17449290 | MS.gene028300:intron | 50.0% |
| !! | TATGGACTGGCGGTATGTGA+AGG | + | chr4.2:17449422-17449441 | MS.gene028300:CDS | 50.0% |
| AAGGAGAAGGGTGGGGAAGA+AGG | + | chr4.2:17452388-17452407 | MS.gene028300:CDS | 55.0% | |
| AGGAGAAGGGTGGGGAAGAA+GGG | + | chr4.2:17452389-17452408 | MS.gene028300:CDS | 55.0% | |
| CGTTGAAGGCCAAACTCGGT+TGG | - | chr4.2:17449623-17449642 | None:intergenic | 55.0% | |
| CTGGCACAGAAGCAGCAGAA+GGG | + | chr4.2:17452286-17452305 | MS.gene028300:CDS | 55.0% | |
| CTTGCTGATGACAAGGGGAC+AGG | + | chr4.2:17451690-17451709 | MS.gene028300:CDS | 55.0% | |
| GATGACAAGGGGACAGGTAC+TGG | + | chr4.2:17451696-17451715 | MS.gene028300:CDS | 55.0% | |
| GCGGAAATTCACTGACGAGC+AGG | + | chr4.2:17450747-17450766 | MS.gene028300:CDS | 55.0% | |
| ! | TGAAGAGAGCGGTGATTCGG+AGG | + | chr4.2:17448998-17449017 | MS.gene028300:CDS | 55.0% |
| !! | GGGACAGGTACTGGTCTCAA+GGG | + | chr4.2:17451705-17451724 | MS.gene028300:CDS | 55.0% |
| GCTGGCACAGAAGCAGCAGA+AGG | + | chr4.2:17452285-17452304 | MS.gene028300:CDS | 60.0% | |
| TCTGCACCCGTCGATAAGCG+AGG | + | chr4.2:17448789-17448808 | MS.gene028300:CDS | 60.0% | |
| TGCCAGCTGCCTGGCATACA+CGG | - | chr4.2:17452272-17452291 | None:intergenic | 60.0% | |
| !! | GGGGACAGGTACTGGTCTCA+AGG | + | chr4.2:17451704-17451723 | MS.gene028300:CDS | 60.0% |
| CTGCTTCTGTGCCAGCTGCC+TGG | - | chr4.2:17452281-17452300 | None:intergenic | 65.0% | |
| CGCCGTGTATGCCAGGCAGC+TGG | + | chr4.2:17452267-17452286 | MS.gene028300:CDS | 70.0% | |
| !! | GCAGGAGCGCCGTGTATGCC+AGG | + | chr4.2:17452260-17452279 | MS.gene028300:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 17448519 | 17452558 | 17448519 | ID=MS.gene028300 |
| chr4.2 | mRNA | 17448519 | 17452558 | 17448519 | ID=MS.gene028300.t1;Parent=MS.gene028300 |
| chr4.2 | exon | 17448519 | 17448810 | 17448519 | ID=MS.gene028300.t1.exon1;Parent=MS.gene028300.t1 |
| chr4.2 | CDS | 17448519 | 17448810 | 17448519 | ID=cds.MS.gene028300.t1;Parent=MS.gene028300.t1 |
| chr4.2 | exon | 17448943 | 17449124 | 17448943 | ID=MS.gene028300.t1.exon2;Parent=MS.gene028300.t1 |
| chr4.2 | CDS | 17448943 | 17449124 | 17448943 | ID=cds.MS.gene028300.t1;Parent=MS.gene028300.t1 |
| chr4.2 | exon | 17449372 | 17449443 | 17449372 | ID=MS.gene028300.t1.exon3;Parent=MS.gene028300.t1 |
| chr4.2 | CDS | 17449372 | 17449443 | 17449372 | ID=cds.MS.gene028300.t1;Parent=MS.gene028300.t1 |
| chr4.2 | exon | 17449548 | 17449804 | 17449548 | ID=MS.gene028300.t1.exon4;Parent=MS.gene028300.t1 |
| chr4.2 | CDS | 17449548 | 17449804 | 17449548 | ID=cds.MS.gene028300.t1;Parent=MS.gene028300.t1 |
| chr4.2 | exon | 17450401 | 17450563 | 17450401 | ID=MS.gene028300.t1.exon5;Parent=MS.gene028300.t1 |
| chr4.2 | CDS | 17450401 | 17450563 | 17450401 | ID=cds.MS.gene028300.t1;Parent=MS.gene028300.t1 |
| chr4.2 | exon | 17450640 | 17450768 | 17450640 | ID=MS.gene028300.t1.exon6;Parent=MS.gene028300.t1 |
| chr4.2 | CDS | 17450640 | 17450768 | 17450640 | ID=cds.MS.gene028300.t1;Parent=MS.gene028300.t1 |
| chr4.2 | exon | 17451180 | 17451895 | 17451180 | ID=MS.gene028300.t1.exon7;Parent=MS.gene028300.t1 |
| chr4.2 | CDS | 17451180 | 17451895 | 17451180 | ID=cds.MS.gene028300.t1;Parent=MS.gene028300.t1 |
| chr4.2 | exon | 17452264 | 17452558 | 17452264 | ID=MS.gene028300.t1.exon8;Parent=MS.gene028300.t1 |
| chr4.2 | CDS | 17452264 | 17452558 | 17452264 | ID=cds.MS.gene028300.t1;Parent=MS.gene028300.t1 |
| Gene Sequence |
| Protein sequence |
