Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31729.t1 | XP_013466257.1 | 89 | 473 | 43 | 1 | 1 | 464 | 1 | 473 | 4.60E-178 | 634.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31729.t1 | Q93ZV7 | 56.1 | 433 | 137 | 6 | 6 | 430 | 6 | 393 | 1.9e-100 | 367.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31729.t1 | A0A072VFS9 | 89.0 | 473 | 43 | 1 | 1 | 464 | 1 | 473 | 3.3e-178 | 634.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050838 | MS.gene31729 | 0.804119 | 2.52E-49 | -1.69E-46 |
| MS.gene051003 | MS.gene31729 | 0.808623 | 2.83E-50 | -1.69E-46 |
| MS.gene05188 | MS.gene31729 | 0.800709 | 1.27E-48 | -1.69E-46 |
| MS.gene057094 | MS.gene31729 | 0.813908 | 2.02E-51 | -1.69E-46 |
| MS.gene059146 | MS.gene31729 | 0.807493 | 4.92E-50 | -1.69E-46 |
| MS.gene06011 | MS.gene31729 | 0.821357 | 4.21E-53 | -1.69E-46 |
| MS.gene060763 | MS.gene31729 | 0.84953 | 3.05E-60 | -1.69E-46 |
| MS.gene060830 | MS.gene31729 | 0.8421 | 3.18E-58 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene05792 | MS.gene31729 | PPI |
| MS.gene023154 | MS.gene31729 | PPI |
| MS.gene002676 | MS.gene31729 | PPI |
| MS.gene31729 | MS.gene51112 | PPI |
| MS.gene35157 | MS.gene31729 | PPI |
| MS.gene05791 | MS.gene31729 | PPI |
| MS.gene29720 | MS.gene31729 | PPI |
| MS.gene08205 | MS.gene31729 | PPI |
| MS.gene051451 | MS.gene31729 | PPI |
| MS.gene31729 | MS.gene067809 | PPI |
| MS.gene43614 | MS.gene31729 | PPI |
| MS.gene65076 | MS.gene31729 | PPI |
| MS.gene064459 | MS.gene31729 | PPI |
| MS.gene002675 | MS.gene31729 | PPI |
| MS.gene36492 | MS.gene31729 | PPI |
| MS.gene51868 | MS.gene31729 | PPI |
| MS.gene24199 | MS.gene31729 | PPI |
| MS.gene66089 | MS.gene31729 | PPI |
| MS.gene31729 | MS.gene27028 | PPI |
| MS.gene98888 | MS.gene31729 | PPI |
| MS.gene028300 | MS.gene31729 | PPI |
| MS.gene004357 | MS.gene31729 | PPI |
| MS.gene31729 | MS.gene63973 | PPI |
| MS.gene94182 | MS.gene31729 | PPI |
| MS.gene43604 | MS.gene31729 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31729.t1 | MTR_1g026890 | 97.463 | 473 | 3 | 1 | 1 | 464 | 1 | 473 | 0.0 | 919 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31729.t1 | AT4G32720 | 50.985 | 457 | 158 | 9 | 1 | 445 | 1 | 403 | 1.89e-141 | 414 |
| MS.gene31729.t1 | AT4G32720 | 51.810 | 442 | 152 | 8 | 1 | 430 | 1 | 393 | 2.57e-139 | 409 |
| MS.gene31729.t1 | AT1G79880 | 42.217 | 424 | 181 | 11 | 5 | 427 | 4 | 364 | 2.82e-94 | 293 |
| MS.gene31729.t1 | AT1G79880 | 39.142 | 373 | 163 | 11 | 56 | 427 | 1 | 310 | 5.30e-68 | 223 |
| MS.gene31729.t1 | AT1G79880 | 38.442 | 385 | 168 | 11 | 56 | 434 | 1 | 322 | 8.22e-68 | 223 |
| MS.gene31729.t1 | AT2G43970 | 29.452 | 146 | 88 | 2 | 2 | 147 | 185 | 315 | 7.03e-12 | 68.2 |
| MS.gene31729.t1 | AT2G43970 | 29.452 | 146 | 88 | 2 | 2 | 147 | 185 | 315 | 7.23e-12 | 68.2 |
| MS.gene31729.t1 | AT5G46250 | 29.940 | 167 | 92 | 5 | 8 | 166 | 101 | 250 | 9.71e-12 | 67.4 |
| MS.gene31729.t1 | AT5G46250 | 29.940 | 167 | 92 | 5 | 8 | 166 | 101 | 250 | 1.12e-11 | 66.6 |
| MS.gene31729.t1 | AT5G46250 | 29.940 | 167 | 92 | 5 | 8 | 166 | 101 | 250 | 1.20e-11 | 66.6 |
Find 114 sgRNAs with CRISPR-Local
Find 449 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGCCGTCTCCTCCCTTTCTT+TGG | 0.161463 | 1.1:-12964149 | MS.gene31729:CDS |
| GATAAAGAACGAACCCTTTC+GGG | 0.239162 | 1.1:+12964241 | None:intergenic |
| CGAGCTTTCTGAGCAGCTTC+AGG | 0.267686 | 1.1:+12965896 | None:intergenic |
| AAGGCTATAACTAAGCCTTT+AGG | 0.286449 | 1.1:+12966671 | None:intergenic |
| GCCGAAAAGGGCCAGGAAAC+TGG | 0.288268 | 1.1:-12966368 | MS.gene31729:CDS |
| ACCTGCTCAATTACCTCTTC+TGG | 0.299485 | 1.1:+12967877 | None:intergenic |
| AACCTGTCGTATAACCTTCT+TGG | 0.309750 | 1.1:+12970572 | None:intergenic |
| CTCAATTACCTCTTCTGGCT+TGG | 0.321742 | 1.1:+12967882 | None:intergenic |
| ATCAAATTAACAGTCATTTC+TGG | 0.326273 | 1.1:+12964102 | None:intergenic |
| AATCCACACGGCGGCGAAAA+AGG | 0.333529 | 1.1:+12964195 | None:intergenic |
| AGGCTATAACTAAGCCTTTA+GGG | 0.335538 | 1.1:+12966672 | None:intergenic |
| TCGTGCTGCTGCAGCCCTTT+CGG | 0.337640 | 1.1:-12965876 | MS.gene31729:CDS |
| AAGGTTGTGTTTCAGAAGTT+TGG | 0.339229 | 1.1:-12966287 | MS.gene31729:CDS |
| TGCTGCAGCCCTTTCGGAAA+AGG | 0.341335 | 1.1:-12965870 | MS.gene31729:CDS |
| CGTAATAGAGACAATGATTC+TGG | 0.344136 | 1.1:-12965329 | MS.gene31729:CDS |
| AAGTAAAACTAACCGGTAAC+TGG | 0.344730 | 1.1:+12965809 | None:intergenic |
| CTTTGCTTTGTTCCTTCAAT+CGG | 0.350383 | 1.1:-12968865 | MS.gene31729:CDS |
| GGCAGAACCCCGCGTTGGTT+TGG | 0.361094 | 1.1:-12964270 | MS.gene31729:intron |
| TAACTACACAGTGGTTAGTT+TGG | 0.362858 | 1.1:-12968888 | MS.gene31729:intron |
| CTCCTCCCTTTCTTTGGAGA+TGG | 0.363161 | 1.1:-12964143 | MS.gene31729:CDS |
| GCTGCAGCCCTTTCGGAAAA+GGG | 0.363306 | 1.1:-12965869 | MS.gene31729:CDS |
| TGAACTGCTCTTTAGTTTGA+AGG | 0.365442 | 1.1:+12966652 | None:intergenic |
| ACAGTACATAGATTTCAATA+TGG | 0.376267 | 1.1:-12965951 | MS.gene31729:intron |
| TCAATTACCTCTTCTGGCTT+GGG | 0.381807 | 1.1:+12967883 | None:intergenic |
| GGATAAAGAACGAACCCTTT+CGG | 0.389740 | 1.1:+12964240 | None:intergenic |
| TGCGTGCCACTTACCTTCCT+CGG | 0.406995 | 1.1:+12965485 | None:intergenic |
| TACTAAGCCCGCTGATGTTA+AGG | 0.409561 | 1.1:-12968813 | MS.gene31729:CDS |
| CCTTTCTTTGGAGATGGTTG+CGG | 0.412482 | 1.1:-12964137 | MS.gene31729:CDS |
| TTCAATATGGGAGATGAGTC+AGG | 0.414927 | 1.1:-12965938 | MS.gene31729:CDS |
| GCCGCCGTGTGGATTGGTTA+TGG | 0.420946 | 1.1:-12964187 | MS.gene31729:CDS |
| AGAAGAGCCAAGAAAACAAT+GGG | 0.421708 | 1.1:-12966418 | MS.gene31729:CDS |
| GGAGGCTGAAGGCGAAGAAA+AGG | 0.425040 | 1.1:-12966489 | MS.gene31729:CDS |
| CGGGCGCTGAGCTAGAATTA+AGG | 0.430112 | 1.1:-12967280 | MS.gene31729:CDS |
| ATGCTTTCGCATCCGATTGA+AGG | 0.433367 | 1.1:+12968853 | None:intergenic |
| GAAGAAGTGGAGTCCTTCTT+CGG | 0.441428 | 1.1:-12967805 | MS.gene31729:CDS |
| GATTTCAGGTCAACAGTGTT+CGG | 0.445081 | 1.1:-12967409 | MS.gene31729:intron |
| GCTACTCTAGATCCAGTTAC+CGG | 0.447734 | 1.1:-12965821 | MS.gene31729:intron |
| CTTGGCATATTGACCGAAGA+AGG | 0.449259 | 1.1:+12967792 | None:intergenic |
| AAATGGGGTGAAGGAAGAAA+AGG | 0.452338 | 1.1:-12966456 | MS.gene31729:CDS |
| GATGGTTGCGGTTCTATGTT+GGG | 0.453015 | 1.1:-12964125 | MS.gene31729:CDS |
| GGAGGAGGAAGGTATGGTAG+AGG | 0.458576 | 1.1:-12965365 | MS.gene31729:CDS |
| TGCATTCCAGGGAGCAAAGT+TGG | 0.464023 | 1.1:-12967922 | MS.gene31729:intron |
| TACTGTGAAGCTTGAAGAAG+TGG | 0.465343 | 1.1:-12967818 | MS.gene31729:CDS |
| GGTGACTGAAGGTGCCGAAA+AGG | 0.481831 | 1.1:-12966381 | MS.gene31729:CDS |
| TATCTTGTTTACCACGAAGC+TGG | 0.484324 | 1.1:+12965530 | None:intergenic |
| AGCTTCACAGTATATTCAAA+TGG | 0.487645 | 1.1:+12967829 | None:intergenic |
| CAGTACATAGATTTCAATAT+GGG | 0.489907 | 1.1:-12965950 | MS.gene31729:CDS |
| TTTGCTCAAGAAATCATCCC+TGG | 0.490461 | 1.1:+12970437 | None:intergenic |
| CCGCAACCATCTCCAAAGAA+AGG | 0.492103 | 1.1:+12964137 | None:intergenic |
| TGTGTTATCCTCCTCGTGGT+TGG | 0.492162 | 1.1:+12966794 | None:intergenic |
| TTCAGGGGAGGAGGAAGGTA+TGG | 0.496516 | 1.1:-12965371 | MS.gene31729:intron |
| AGATGGTTGCGGTTCTATGT+TGG | 0.496982 | 1.1:-12964126 | MS.gene31729:CDS |
| CTGCAGCCCTTTCGGAAAAG+GGG | 0.498607 | 1.1:-12965868 | MS.gene31729:CDS |
| TTCCAGGGAGCAAAGTTGGC+AGG | 0.499364 | 1.1:-12967918 | MS.gene31729:intron |
| TGTCTTACGTGAAGATTTGA+AGG | 0.499878 | 1.1:-12966306 | MS.gene31729:CDS |
| CTAAAACGGTGGCAAAATAG+AGG | 0.501254 | 1.1:+12964219 | None:intergenic |
| GCCAGAAGAGGTAATTGAGC+AGG | 0.508078 | 1.1:-12967878 | MS.gene31729:CDS |
| CGCAACCATCTCCAAAGAAA+GGG | 0.509431 | 1.1:+12964138 | None:intergenic |
| ACTGTCAATGAAAGTGAAGA+TGG | 0.510540 | 1.1:-12970414 | MS.gene31729:CDS |
| TGAAGGTGCCGAAAAGGGCC+AGG | 0.512350 | 1.1:-12966375 | MS.gene31729:CDS |
| CCGAAAAGGGCCAGGAAACT+GGG | 0.514402 | 1.1:-12966367 | MS.gene31729:CDS |
| TATTGTTACAGCTACCCTAA+AGG | 0.518011 | 1.1:-12966686 | MS.gene31729:intron |
| GTTTCTTCCTTAACATCAGC+GGG | 0.518351 | 1.1:+12968806 | None:intergenic |
| GTGACTGAAGGTGCCGAAAA+GGG | 0.521308 | 1.1:-12966380 | MS.gene31729:CDS |
| GTTCGGTTGCCCCGTCATGT+TGG | 0.521804 | 1.1:-12967392 | MS.gene31729:CDS |
| TGCAGCCCTTTCGGAAAAGG+GGG | 0.524299 | 1.1:-12965867 | MS.gene31729:CDS |
| TCCTCAGCAGCAACTTCAGA+GGG | 0.526503 | 1.1:+12966578 | None:intergenic |
| AGCCAAGAAAACAATGGGGC+AGG | 0.526829 | 1.1:-12966413 | MS.gene31729:CDS |
| CAATACTGGAGCCAGCTTCG+TGG | 0.527832 | 1.1:-12965541 | MS.gene31729:CDS |
| TCAGTGATAGTAATCTTCCC+AGG | 0.528131 | 1.1:-12970455 | MS.gene31729:CDS |
| ACCCTCTGAAGTTGCTGCTG+AGG | 0.528326 | 1.1:-12966579 | MS.gene31729:CDS |
| GGAGGAAGGTATGGTAGAGG+AGG | 0.530321 | 1.1:-12965362 | MS.gene31729:CDS |
| CTCCAAAGAAAGGGAGGAGA+CGG | 0.534238 | 1.1:+12964147 | None:intergenic |
| GAAAACAATGGGGCAGGTGA+AGG | 0.536070 | 1.1:-12966407 | MS.gene31729:CDS |
| GAGATGAGTCAGGATTCATT+CGG | 0.541514 | 1.1:-12965928 | MS.gene31729:CDS |
| AACCAAGAAGGTTATACGAC+AGG | 0.543197 | 1.1:-12970574 | MS.gene31729:intron |
| TCACTCAAGCTATCAGAAGA+TGG | 0.556963 | 1.1:-12968746 | MS.gene31729:intron |
| CCGTGTGGATTGGTTATGGT+GGG | 0.556967 | 1.1:-12964183 | MS.gene31729:CDS |
| GATGCGAAAGCATCTTAAGT+TGG | 0.561750 | 1.1:-12968843 | MS.gene31729:CDS |
| GGTTTGGTTGAAACCCGAAA+GGG | 0.574284 | 1.1:-12964254 | MS.gene31729:CDS |
| CAATGGGGCAGGTGAAGGAA+AGG | 0.574806 | 1.1:-12966402 | MS.gene31729:CDS |
| GGTTTCAACCAAACCAACGC+GGG | 0.577414 | 1.1:+12964262 | None:intergenic |
| TTCCTCAGCAGCAACTTCAG+AGG | 0.588125 | 1.1:+12966577 | None:intergenic |
| CATCTGATGAGAACTCAACA+AGG | 0.591422 | 1.1:+12967342 | None:intergenic |
| GAGAAGAGCCAAGAAAACAA+TGG | 0.592496 | 1.1:-12966419 | MS.gene31729:CDS |
| CAATGGAGTGAACGAAGGAA+AGG | 0.592633 | 1.1:-12966510 | MS.gene31729:CDS |
| TCAGAAGTTTGGTGATGTGA+AGG | 0.592670 | 1.1:-12966276 | MS.gene31729:intron |
| TCAATGGCAGAACCCCGCGT+TGG | 0.593057 | 1.1:-12964275 | MS.gene31729:intron |
| TGGTTTGGTTGAAACCCGAA+AGG | 0.593928 | 1.1:-12964255 | MS.gene31729:CDS |
| CAGTGATAGTAATCTTCCCA+GGG | 0.596203 | 1.1:-12970454 | MS.gene31729:CDS |
| GCAGCCCTTTCGGAAAAGGG+GGG | 0.596520 | 1.1:-12965866 | MS.gene31729:CDS |
| GCCGTGTGGATTGGTTATGG+TGG | 0.605622 | 1.1:-12964184 | MS.gene31729:CDS |
| TGACGAAGAAACAACCAAGA+AGG | 0.607861 | 1.1:-12970586 | MS.gene31729:CDS |
| TTGCTCAAGAAATCATCCCT+GGG | 0.608198 | 1.1:+12970438 | None:intergenic |
| TGAACTTCCCAAGCCAGAAG+AGG | 0.608914 | 1.1:-12967890 | MS.gene31729:CDS |
| AGAGACAATGATTCTGGACG+AGG | 0.611973 | 1.1:-12965323 | MS.gene31729:intron |
| GACAATGATAAAGAAAACAA+TGG | 0.616572 | 1.1:-12966527 | MS.gene31729:CDS |
| GGTGAAGGAAAGGTGACTGA+AGG | 0.628219 | 1.1:-12966392 | MS.gene31729:CDS |
| AGTTTCTTCCTTAACATCAG+CGG | 0.630747 | 1.1:+12968805 | None:intergenic |
| AACCATCTCCAAAGAAAGGG+AGG | 0.632391 | 1.1:+12964141 | None:intergenic |
| CTTCTTCGGTCAATATGCCA+AGG | 0.638433 | 1.1:-12967791 | MS.gene31729:intron |
| AACGAAGGAAAGGAGGCTGA+AGG | 0.639810 | 1.1:-12966500 | MS.gene31729:CDS |
| TGGAGTGAACGAAGGAAAGG+AGG | 0.640717 | 1.1:-12966507 | MS.gene31729:CDS |
| CAAAGAAAGGGAGGAGACGG+CGG | 0.650985 | 1.1:+12964150 | None:intergenic |
| TATTTGTGTTATCCTCCTCG+TGG | 0.654110 | 1.1:+12966790 | None:intergenic |
| GAAAACAATGGAGTGAACGA+AGG | 0.669742 | 1.1:-12966515 | MS.gene31729:CDS |
| ATCTGATGAGAACTCAACAA+GGG | 0.670020 | 1.1:+12967343 | None:intergenic |
| CCCACCATAACCAATCCACA+CGG | 0.672435 | 1.1:+12964183 | None:intergenic |
| GTTTCAACCAAACCAACGCG+GGG | 0.689501 | 1.1:+12964263 | None:intergenic |
| GAATGTGGGTTCCAACCACG+AGG | 0.704964 | 1.1:-12966805 | MS.gene31729:CDS |
| TGTGGGTTCCAACCACGAGG+AGG | 0.705081 | 1.1:-12966802 | MS.gene31729:CDS |
| GGGTTTCAACCAAACCAACG+CGG | 0.718761 | 1.1:+12964261 | None:intergenic |
| GAAGAGCCAAGAAAACAATG+GGG | 0.727730 | 1.1:-12966417 | MS.gene31729:CDS |
| ACCATAACCAATCCACACGG+CGG | 0.730024 | 1.1:+12964186 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATATATCTAATTAATAAG+AGG | - | chr1.1:12970119-12970138 | MS.gene31729:intron | 10.0% |
| !! | TTTATATTCATTAAATTTCT+TGG | - | chr1.1:12967088-12967107 | MS.gene31729:intron | 10.0% |
| !! | TTTATTTAACAAAAATAGTT+TGG | - | chr1.1:12967217-12967236 | MS.gene31729:intron | 10.0% |
| !!! | AAATTGAAGTTTTTTATAAA+GGG | + | chr1.1:12967726-12967745 | None:intergenic | 10.0% |
| !!! | AATACTTTCTATATTTATTT+TGG | + | chr1.1:12969424-12969443 | None:intergenic | 10.0% |
| !!! | AGTTATTTTTGAATTAATTT+TGG | - | chr1.1:12969608-12969627 | MS.gene31729:intron | 10.0% |
| !!! | TTGTCTTTTTTTTATTTATT+TGG | - | chr1.1:12968563-12968582 | MS.gene31729:intron | 10.0% |
| !! | ATTTCACACATAAAAATTTA+TGG | + | chr1.1:12969758-12969777 | None:intergenic | 15.0% |
| !! | TAATATATGTATTTGTCAAA+TGG | + | chr1.1:12967614-12967633 | None:intergenic | 15.0% |
| !! | TATTAAAAAACTGTAATTGA+TGG | - | chr1.1:12967661-12967680 | MS.gene31729:intron | 15.0% |
| !!! | AATTATATTTATACCTTTTC+AGG | - | chr1.1:12969330-12969349 | MS.gene31729:intron | 15.0% |
| !!! | ATTATATTTATACCTTTTCA+GGG | - | chr1.1:12969331-12969350 | MS.gene31729:intron | 15.0% |
| !!! | GAAATTGAAGTTTTTTATAA+AGG | + | chr1.1:12967727-12967746 | None:intergenic | 15.0% |
| !!! | GTTTATATTTTTAATGATGA+AGG | - | chr1.1:12966332-12966351 | MS.gene31729:CDS | 15.0% |
| !!! | TTTTTAGTTAAGTTTCAATT+TGG | - | chr1.1:12969550-12969569 | MS.gene31729:intron | 15.0% |
| !! | AAAAATAGAGAAAATCATCA+AGG | + | chr1.1:12969271-12969290 | None:intergenic | 20.0% |
| !! | AACAGCATAATCTAAATTAA+TGG | + | chr1.1:12966411-12966430 | None:intergenic | 20.0% |
| !! | AATGAAATTTATATCTATCG+TGG | + | chr1.1:12966565-12966584 | None:intergenic | 20.0% |
| !! | ATAGATAAATATCAAACCAA+AGG | + | chr1.1:12968510-12968529 | None:intergenic | 20.0% |
| !! | ATTTAAGAAAATTGAAGTAC+CGG | - | chr1.1:12964470-12964489 | MS.gene31729:intron | 20.0% |
| !! | CTAGTTAATTACTAAGTTTA+AGG | + | chr1.1:12969721-12969740 | None:intergenic | 20.0% |
| !! | GAAATAAGTAATAAGTTATG+TGG | + | chr1.1:12966762-12966781 | None:intergenic | 20.0% |
| !! | GTTAATACCAATAAAAAGTA+GGG | - | chr1.1:12965143-12965162 | MS.gene31729:intron | 20.0% |
| !! | TAGATATAAATTTCATGTAG+TGG | + | chr1.1:12966526-12966545 | None:intergenic | 20.0% |
| !! | TTTATAAGCAAATGTTAGTT+TGG | - | chr1.1:12969664-12969683 | MS.gene31729:intron | 20.0% |
| !!! | ACATTTTTGTTTTTGATTTC+AGG | - | chr1.1:12967295-12967314 | MS.gene31729:CDS | 20.0% |
| !!! | AGATTTCTTTAAGATAAATC+TGG | - | chr1.1:12967150-12967169 | MS.gene31729:intron | 20.0% |
| !!! | ATAAATAAAGCATCATTACT+CGG | + | chr1.1:12967073-12967092 | None:intergenic | 20.0% |
| !!! | ATATTTTCTCAAATTACTGT+CGG | - | chr1.1:12965503-12965522 | MS.gene31729:CDS | 20.0% |
| !!! | ATCTAATTTTTCAATCAGTT+GGG | - | chr1.1:12968936-12968955 | MS.gene31729:intron | 20.0% |
| !!! | ATTAATTTAGAGTTAATCGA+AGG | + | chr1.1:12966500-12966519 | None:intergenic | 20.0% |
| !!! | ATTACTTTGCTTTCATTTTA+TGG | + | chr1.1:12968000-12968019 | None:intergenic | 20.0% |
| !!! | CAATTTGGTTTATGTTTTTA+GGG | - | chr1.1:12964363-12964382 | MS.gene31729:intron | 20.0% |
| !!! | CTTCAATTTTCTTAAATGAT+CGG | + | chr1.1:12964467-12964486 | None:intergenic | 20.0% |
| !!! | GAAGAAAATAAACTGATTTT+AGG | + | chr1.1:12965081-12965100 | None:intergenic | 20.0% |
| !!! | GATGATTTTCTCTATTTTTT+GGG | - | chr1.1:12969272-12969291 | MS.gene31729:intron | 20.0% |
| !!! | TCAATTTGGTTTATGTTTTT+AGG | - | chr1.1:12964362-12964381 | MS.gene31729:intron | 20.0% |
| !!! | TGATGATTTTCTCTATTTTT+TGG | - | chr1.1:12969271-12969290 | MS.gene31729:intron | 20.0% |
| !!! | TTAGTGAATCATTAATTTTC+TGG | - | chr1.1:12966584-12966603 | MS.gene31729:CDS | 20.0% |
| !!! | TTATATTTATACCTTTTCAG+GGG | - | chr1.1:12969332-12969351 | MS.gene31729:intron | 20.0% |
| ! | AAACCTTCAAATATTAACCA+CGG | + | chr1.1:12967186-12967205 | None:intergenic | 25.0% |
| ! | AACGAAAACAAAAACATGTT+TGG | + | chr1.1:12965790-12965809 | None:intergenic | 25.0% |
| ! | AACTCTAAATTAACGATAGA+TGG | - | chr1.1:12966385-12966404 | MS.gene31729:CDS | 25.0% |
| ! | ACAGTACATAGATTTCAATA+TGG | - | chr1.1:12968767-12968786 | MS.gene31729:CDS | 25.0% |
| ! | ACCAAATTGATAAACAAAAG+AGG | + | chr1.1:12964352-12964371 | None:intergenic | 25.0% |
| ! | ATAATGGTAGATTATAACAG+AGG | + | chr1.1:12970153-12970172 | None:intergenic | 25.0% |
| ! | ATATATTAACATTAATGCCG+TGG | - | chr1.1:12966992-12967011 | MS.gene31729:intron | 25.0% |
| ! | ATTTAGATTATGCTGTTGTA+TGG | - | chr1.1:12966414-12966433 | MS.gene31729:CDS | 25.0% |
| ! | ATTTATGTTGTTCTGTTGTA+TGG | - | chr1.1:12966446-12966465 | MS.gene31729:CDS | 25.0% |
| ! | CAATCTATCCTATTCTTAAT+TGG | + | chr1.1:12966189-12966208 | None:intergenic | 25.0% |
| ! | CAGGTTATTAAAACAAAAGA+AGG | + | chr1.1:12968619-12968638 | None:intergenic | 25.0% |
| ! | CAGTACATAGATTTCAATAT+GGG | - | chr1.1:12968768-12968787 | MS.gene31729:CDS | 25.0% |
| ! | CATTCTAACAGTATTATAGT+CGG | - | chr1.1:12967019-12967038 | MS.gene31729:intron | 25.0% |
| ! | CATTGATGTTAATATTACCT+TGG | + | chr1.1:12966947-12966966 | None:intergenic | 25.0% |
| ! | CCAAATTGATAAACAAAAGA+GGG | + | chr1.1:12964351-12964370 | None:intergenic | 25.0% |
| ! | CGTTAATACCAATAAAAAGT+AGG | - | chr1.1:12965142-12965161 | MS.gene31729:intron | 25.0% |
| ! | GAATAATTAAGCAAAAACGA+CGG | + | chr1.1:12964177-12964196 | None:intergenic | 25.0% |
| ! | GACAATGATAAAGAAAACAA+TGG | - | chr1.1:12968191-12968210 | MS.gene31729:intron | 25.0% |
| ! | GAGACTTATTAATTAAATGG+TGG | + | chr1.1:12964949-12964968 | None:intergenic | 25.0% |
| ! | GATGTAAAAGTAAAACTAAC+CGG | + | chr1.1:12968919-12968938 | None:intergenic | 25.0% |
| ! | GTGATAAATTCATTCTAATC+AGG | - | chr1.1:12966057-12966076 | MS.gene31729:intron | 25.0% |
| ! | TACAACAATCATACACAAAA+TGG | + | chr1.1:12966028-12966047 | None:intergenic | 25.0% |
| ! | TCTGTTATAATCTACCATTA+TGG | - | chr1.1:12970152-12970171 | MS.gene31729:intron | 25.0% |
| ! | TGTATATATTTACTCAATGC+AGG | - | chr1.1:12967834-12967853 | MS.gene31729:CDS | 25.0% |
| ! | TTGATCAAATGAGAAGAAAT+TGG | + | chr1.1:12965765-12965784 | None:intergenic | 25.0% |
| !! | ATTTAAAATTGAGACAGAGT+TGG | - | chr1.1:12970005-12970024 | MS.gene31729:intron | 25.0% |
| !! | ATTTTCCCTAGTTTACATTT+TGG | + | chr1.1:12965735-12965754 | None:intergenic | 25.0% |
| !! | CACTTGAAATTTTGTTCATT+GGG | - | chr1.1:12966660-12966679 | MS.gene31729:CDS | 25.0% |
| !! | TAATTTAAAGTTAGCGATAG+TGG | - | chr1.1:12966219-12966238 | MS.gene31729:intron | 25.0% |
| !! | TCACTTGAAATTTTGTTCAT+TGG | - | chr1.1:12966659-12966678 | MS.gene31729:CDS | 25.0% |
| !! | TTGCTTTCATTTTATGGTTA+GGG | + | chr1.1:12967994-12968013 | None:intergenic | 25.0% |
| !! | TTTGCTTTCATTTTATGGTT+AGG | + | chr1.1:12967995-12968014 | None:intergenic | 25.0% |
| !!! | ATTTGTTGTTGTTTTTGGAA+TGG | - | chr1.1:12964809-12964828 | MS.gene31729:intron | 25.0% |
| !!! | CATCTAATTTTTCAATCAGT+TGG | - | chr1.1:12968935-12968954 | MS.gene31729:intron | 25.0% |
| !!! | CCATTCAATTCAATTTTAGT+GGG | - | chr1.1:12964869-12964888 | MS.gene31729:intron | 25.0% |
| !!! | CTAGTGACAATGATTTTTTA+TGG | - | chr1.1:12968997-12969016 | MS.gene31729:intron | 25.0% |
| !!! | GGTTTTGTTAATGTAATTGA+AGG | - | chr1.1:12964384-12964403 | MS.gene31729:intron | 25.0% |
| !!! | GTTACATTTGTTGTTGTTTT+TGG | - | chr1.1:12964804-12964823 | MS.gene31729:intron | 25.0% |
| !!! | TGGATTTTGACAGAAAATAT+TGG | + | chr1.1:12967594-12967613 | None:intergenic | 25.0% |
| !!! | TTTGTTGTTGTTTTTGGAAT+GGG | - | chr1.1:12964810-12964829 | MS.gene31729:intron | 25.0% |
| AAAAGGAGCAAGAGAAAAAT+GGG | - | chr1.1:12968246-12968265 | MS.gene31729:intron | 30.0% | |
| AACAGAACAACATAAATCGA+AGG | + | chr1.1:12966443-12966462 | None:intergenic | 30.0% | |
| AACCTTCAAATATTAACCAC+GGG | + | chr1.1:12967185-12967204 | None:intergenic | 30.0% | |
| AAGCAAAAATTAGTGTATGC+GGG | - | chr1.1:12967419-12967438 | MS.gene31729:intron | 30.0% | |
| AGCTTCACAGTATATTCAAA+TGG | + | chr1.1:12966892-12966911 | None:intergenic | 30.0% | |
| ATAAACAAAAGAGGGCAAAA+TGG | + | chr1.1:12964343-12964362 | None:intergenic | 30.0% | |
| ATCCTACCAAAATGTAAACT+AGG | - | chr1.1:12965726-12965745 | MS.gene31729:intron | 30.0% | |
| ATCTATGAACATGCTTACTT+TGG | + | chr1.1:12967464-12967483 | None:intergenic | 30.0% | |
| ATGAAGGTTTCGAAAAAAAG+GGG | + | chr1.1:12970214-12970233 | None:intergenic | 30.0% | |
| ATTTACTAACTTCTACCTGT+GGG | - | chr1.1:12967750-12967769 | MS.gene31729:intron | 30.0% | |
| CACTAAAATGGCTAATTCTT+CGG | + | chr1.1:12965057-12965076 | None:intergenic | 30.0% | |
| CCCACTAAAATTGAATTGAA+TGG | + | chr1.1:12964872-12964891 | None:intergenic | 30.0% | |
| GAAAAATCTCGTAAGAATGT+GGG | - | chr1.1:12967899-12967918 | MS.gene31729:CDS | 30.0% | |
| GAAGCAAAAATTAGTGTATG+CGG | - | chr1.1:12967418-12967437 | MS.gene31729:intron | 30.0% | |
| GATGAAGGTTTCGAAAAAAA+GGG | + | chr1.1:12970215-12970234 | None:intergenic | 30.0% | |
| GGCGAGACTTATTAATTAAA+TGG | + | chr1.1:12964952-12964971 | None:intergenic | 30.0% | |
| GTGTGAAATGACATATGATA+AGG | - | chr1.1:12969769-12969788 | MS.gene31729:intron | 30.0% | |
| TAATTAATAAGTCTCGCCAT+TGG | - | chr1.1:12964954-12964973 | MS.gene31729:intron | 30.0% | |
| TACCAATCAAGAATAAGTCT+CGG | + | chr1.1:12969134-12969153 | None:intergenic | 30.0% | |
| TACTGTTAGAATGTAAACCA+CGG | + | chr1.1:12967012-12967031 | None:intergenic | 30.0% | |
| TAGGTACATGTATACGTATA+CGG | + | chr1.1:12964760-12964779 | None:intergenic | 30.0% | |
| TCATACACAAAATGGATGAA+TGG | + | chr1.1:12966020-12966039 | None:intergenic | 30.0% | |
| TCCTACCAAAATGTAAACTA+GGG | - | chr1.1:12965727-12965746 | MS.gene31729:intron | 30.0% | |
| TGAAAAATCTCGTAAGAATG+TGG | - | chr1.1:12967898-12967917 | MS.gene31729:CDS | 30.0% | |
| TGAGTTAAAGATCTAAACCA+CGG | + | chr1.1:12968643-12968662 | None:intergenic | 30.0% | |
| TGATGAAGGTTTCGAAAAAA+AGG | + | chr1.1:12970216-12970235 | None:intergenic | 30.0% | |
| TGTTGGTATACGTAAATTGT+TGG | - | chr1.1:12970380-12970399 | MS.gene31729:intron | 30.0% | |
| TTCTTGATTGGTATGTAATC+AGG | - | chr1.1:12969141-12969160 | MS.gene31729:intron | 30.0% | |
| TTGAGTGCAAATACAAGTTT+CGG | + | chr1.1:12965478-12965497 | None:intergenic | 30.0% | |
| ! | AAATAGTTTGGAGTATAGTC+TGG | - | chr1.1:12967229-12967248 | MS.gene31729:intron | 30.0% |
| ! | ATAGTGGAAAAAAACTTGTC+TGG | - | chr1.1:12965010-12965029 | MS.gene31729:intron | 30.0% |
| ! | ATCACTATCGTGTTTTATGT+TGG | + | chr1.1:12964429-12964448 | None:intergenic | 30.0% |
| ! | GAGACTTTTTGATCTAATAG+TGG | - | chr1.1:12964994-12965013 | MS.gene31729:intron | 30.0% |
| ! | GCCATTCAATTCAATTTTAG+TGG | - | chr1.1:12964868-12964887 | MS.gene31729:intron | 30.0% |
| ! | GTCACATCATTATTCTTTTC+TGG | + | chr1.1:12968101-12968120 | None:intergenic | 30.0% |
| ! | TCCTAAAGACTATAGTTTGT+TGG | - | chr1.1:12965655-12965674 | MS.gene31729:intron | 30.0% |
| ! | TGAAACTTTCTAAGAGTAGA+TGG | - | chr1.1:12966616-12966635 | MS.gene31729:CDS | 30.0% |
| ! | TGCTTTCATTTTATGGTTAG+GGG | + | chr1.1:12967993-12968012 | None:intergenic | 30.0% |
| ! | TTTGGTAGTATATTGTGAGT+AGG | - | chr1.1:12969682-12969701 | MS.gene31729:intron | 30.0% |
| !! | AGAAAGTATTAACTGCATTC+AGG | - | chr1.1:12969434-12969453 | MS.gene31729:intron | 30.0% |
| !! | CCCTCTTTTGTTTATCAATT+TGG | - | chr1.1:12964348-12964367 | MS.gene31729:intron | 30.0% |
| !! | CCTAAAGACTATAGTTTGTT+GGG | - | chr1.1:12965656-12965675 | MS.gene31729:intron | 30.0% |
| !! | GAAAGTATTAACTGCATTCA+GGG | - | chr1.1:12969435-12969454 | MS.gene31729:intron | 30.0% |
| !! | TTTTGTTTGTTTGAAACTGC+AGG | - | chr1.1:12964228-12964247 | MS.gene31729:CDS | 30.0% |
| !!! | AGGTTTACCCTACTTTTTAT+TGG | + | chr1.1:12965153-12965172 | None:intergenic | 30.0% |
| !!! | ATTTTAGTGGGTTAGTTCTA+TGG | - | chr1.1:12964881-12964900 | MS.gene31729:intron | 30.0% |
| !!! | ATTTTTTTCTCTCACTTTGC+TGG | - | chr1.1:12966163-12966182 | MS.gene31729:intron | 30.0% |
| !!! | CTGATTTTAGGACACTAAAA+TGG | + | chr1.1:12965069-12965088 | None:intergenic | 30.0% |
| AAAGAGGGCAAAATGGTAAA+AGG | + | chr1.1:12964336-12964355 | None:intergenic | 35.0% | |
| AAAGGAGCAAGAGAAAAATG+GGG | - | chr1.1:12968247-12968266 | MS.gene31729:intron | 35.0% | |
| AAAGTAGGGTAAACCTTAGT+CGG | - | chr1.1:12965157-12965176 | MS.gene31729:intron | 35.0% | |
| AAGGCTATAACTAAGCCTTT+AGG | + | chr1.1:12968050-12968069 | None:intergenic | 35.0% | |
| AAGGTTGTGTTTCAGAAGTT+TGG | - | chr1.1:12968431-12968450 | MS.gene31729:intron | 35.0% | |
| AAGTAAAACTAACCGGTAAC+TGG | + | chr1.1:12968912-12968931 | None:intergenic | 35.0% | |
| AAGTAGCTGAGAACAAAATC+AGG | + | chr1.1:12969500-12969519 | None:intergenic | 35.0% | |
| AATAAAATGTATCCCGTGCT+TGG | + | chr1.1:12969876-12969895 | None:intergenic | 35.0% | |
| ACCAATCAAGAATAAGTCTC+GGG | + | chr1.1:12969133-12969152 | None:intergenic | 35.0% | |
| ACTGTCAATGAAAGTGAAGA+TGG | - | chr1.1:12964304-12964323 | MS.gene31729:intron | 35.0% | |
| AGAAGAGCCAAGAAAACAAT+GGG | - | chr1.1:12968300-12968319 | MS.gene31729:intron | 35.0% | |
| AGATTACTCTTTAGGTGAGT+TGG | - | chr1.1:12965294-12965313 | MS.gene31729:intron | 35.0% | |
| AGGCTATAACTAAGCCTTTA+GGG | + | chr1.1:12968049-12968068 | None:intergenic | 35.0% | |
| AGTTTCTTCCTTAACATCAG+CGG | + | chr1.1:12965916-12965935 | None:intergenic | 35.0% | |
| ATCCCGTGGTTAATATTTGA+AGG | - | chr1.1:12967180-12967199 | MS.gene31729:intron | 35.0% | |
| ATCTGATGAGAACTCAACAA+GGG | + | chr1.1:12967378-12967397 | None:intergenic | 35.0% | |
| CATATGATAAGGTCAGTTTG+TGG | - | chr1.1:12969780-12969799 | MS.gene31729:intron | 35.0% | |
| CATTTACTAACTTCTACCTG+TGG | - | chr1.1:12967749-12967768 | MS.gene31729:intron | 35.0% | |
| CCAGTAAAATTGTGAAGTAC+CGG | - | chr1.1:12964498-12964517 | MS.gene31729:intron | 35.0% | |
| CCCAACAAACTATAGTCTTT+AGG | + | chr1.1:12965659-12965678 | None:intergenic | 35.0% | |
| CGTAATAGAGACAATGATTC+TGG | - | chr1.1:12969389-12969408 | MS.gene31729:intron | 35.0% | |
| CTAGAGCTTTGCAAAGAAAT+TGG | + | chr1.1:12966277-12966296 | None:intergenic | 35.0% | |
| CTCATGTTTACCAGAATCAT+AGG | + | chr1.1:12967132-12967151 | None:intergenic | 35.0% | |
| CTGAAATTCTAACTACACAG+TGG | - | chr1.1:12965821-12965840 | MS.gene31729:intron | 35.0% | |
| GAAAAGGAGCAAGAGAAAAA+TGG | - | chr1.1:12968245-12968264 | MS.gene31729:intron | 35.0% | |
| GAAACAAAATGTCACGTATG+TGG | + | chr1.1:12966727-12966746 | None:intergenic | 35.0% | |
| GATTACTCTTTAGGTGAGTT+GGG | - | chr1.1:12965295-12965314 | MS.gene31729:intron | 35.0% | |
| GTGAAGCTGAAAAACAATAC+TGG | - | chr1.1:12969163-12969182 | MS.gene31729:intron | 35.0% | |
| TACATGTACCTATGCAACAT+AGG | - | chr1.1:12964768-12964787 | MS.gene31729:intron | 35.0% | |
| TATATTTACTCAATGCAGGC+AGG | - | chr1.1:12967838-12967857 | MS.gene31729:CDS | 35.0% | |
| TATTGTTACAGCTACCCTAA+AGG | - | chr1.1:12968032-12968051 | MS.gene31729:intron | 35.0% | |
| TCACATACATATGAGAGTGA+AGG | + | chr1.1:12964840-12964859 | None:intergenic | 35.0% | |
| TCACTCAAAACGAGAAAAAG+TGG | + | chr1.1:12964557-12964576 | None:intergenic | 35.0% | |
| TCATATCTCACTTGAACCAA+TGG | + | chr1.1:12964973-12964992 | None:intergenic | 35.0% | |
| TGAAGGTTTCGAAAAAAAGG+GGG | + | chr1.1:12970213-12970232 | None:intergenic | 35.0% | |
| TTCAGGGTTATTTACAACAC+TGG | - | chr1.1:12969451-12969470 | MS.gene31729:intron | 35.0% | |
| TTTACTAACTTCTACCTGTG+GGG | - | chr1.1:12967751-12967770 | MS.gene31729:intron | 35.0% | |
| TTTGCTGGCCAATTAAGAAT+AGG | - | chr1.1:12966178-12966197 | MS.gene31729:intron | 35.0% | |
| ! | AAAGTTTAGGACTCTGTAAG+TGG | + | chr1.1:12965392-12965411 | None:intergenic | 35.0% |
| ! | AAGTTTAGGACTCTGTAAGT+GGG | + | chr1.1:12965391-12965410 | None:intergenic | 35.0% |
| ! | AATAAAGCATCATTACTCGG+AGG | + | chr1.1:12967070-12967089 | None:intergenic | 35.0% |
| ! | ACTTTTTGTCTCCAACATGA+CGG | + | chr1.1:12967340-12967359 | None:intergenic | 35.0% |
| ! | CTACTTTCAGATTTTGTGGT+TGG | - | chr1.1:12969514-12969533 | MS.gene31729:intron | 35.0% |
| ! | CTATAGTCTTTAGGAGAAGT+TGG | + | chr1.1:12965650-12965669 | None:intergenic | 35.0% |
| ! | CTTTGCTTTGTTCCTTCAAT+CGG | - | chr1.1:12965853-12965872 | MS.gene31729:CDS | 35.0% |
| ! | GCAGAAGATTTCTAAAGAGA+GGG | + | chr1.1:12970183-12970202 | None:intergenic | 35.0% |
| ! | TAACTACACAGTGGTTAGTT+TGG | - | chr1.1:12965830-12965849 | MS.gene31729:CDS | 35.0% |
| ! | TGGTGATGTGAAGGTAAATA+TGG | - | chr1.1:12968451-12968470 | MS.gene31729:intron | 35.0% |
| ! | TTTTGACGCAGAAAGAGAAA+AGG | - | chr1.1:12967862-12967881 | MS.gene31729:CDS | 35.0% |
| !! | CTCACTATTTTAAGCAGAGT+TGG | + | chr1.1:12970041-12970060 | None:intergenic | 35.0% |
| !! | TATTTATACCTTTTCAGGGG+AGG | - | chr1.1:12969335-12969354 | MS.gene31729:intron | 35.0% |
| !! | TCAGCTACTTTCAGATTTTG+TGG | - | chr1.1:12969510-12969529 | MS.gene31729:intron | 35.0% |
| !! | TCCCTAGTTTACATTTTGGT+AGG | + | chr1.1:12965731-12965750 | None:intergenic | 35.0% |
| !! | TGAACTGCTCTTTAGTTTGA+AGG | + | chr1.1:12968069-12968088 | None:intergenic | 35.0% |
| !!! | GTTTTTTATAAAGGGATGCC+AGG | + | chr1.1:12967718-12967737 | None:intergenic | 35.0% |
| !!! | TCTCTATTTTTTGGGATCAC+CGG | - | chr1.1:12969280-12969299 | MS.gene31729:intron | 35.0% |
| !!! | TTGTTTTAATAACCTGACCG+TGG | - | chr1.1:12968623-12968642 | MS.gene31729:intron | 35.0% |
| AAATGGGGTGAAGGAAGAAA+AGG | - | chr1.1:12968262-12968281 | MS.gene31729:intron | 40.0% | |
| AAATTGAGACAGAGTTGGCA+AGG | - | chr1.1:12970010-12970029 | MS.gene31729:intron | 40.0% | |
| AACCAAGAAGGTTATACGAC+AGG | - | chr1.1:12964144-12964163 | MS.gene31729:CDS | 40.0% | |
| AACCTGTCGTATAACCTTCT+TGG | + | chr1.1:12964149-12964168 | None:intergenic | 40.0% | |
| AATCCCCACAACACATCTTT+GGG | - | chr1.1:12965229-12965248 | MS.gene31729:intron | 40.0% | |
| AATCTGGTATTTGAATCCCG+TGG | - | chr1.1:12967166-12967185 | MS.gene31729:intron | 40.0% | |
| AGATGCGAAACTGGTTGAAT+CGG | + | chr1.1:12970337-12970356 | None:intergenic | 40.0% | |
| CAGTGATAGTAATCTTCCCA+GGG | - | chr1.1:12964264-12964283 | MS.gene31729:CDS | 40.0% | |
| CATCTGATGAGAACTCAACA+AGG | + | chr1.1:12967379-12967398 | None:intergenic | 40.0% | |
| CATTCTATTCGTGCATTCCA+GGG | - | chr1.1:12966785-12966804 | MS.gene31729:CDS | 40.0% | |
| CCAATCAAGAATAAGTCTCG+GGG | + | chr1.1:12969132-12969151 | None:intergenic | 40.0% | |
| CTAAAACGGTGGCAAAATAG+AGG | + | chr1.1:12970502-12970521 | None:intergenic | 40.0% | |
| CTAAAGAGTAATCTCCGCTA+AGG | + | chr1.1:12965288-12965307 | None:intergenic | 40.0% | |
| CTTAGCGGAGATTACTCTTT+AGG | - | chr1.1:12965286-12965305 | MS.gene31729:intron | 40.0% | |
| CTTGGTGAAAAGTTGAAGCA+TGG | - | chr1.1:12967106-12967125 | MS.gene31729:intron | 40.0% | |
| GAAAACAATGGAGTGAACGA+AGG | - | chr1.1:12968203-12968222 | MS.gene31729:intron | 40.0% | |
| GAAGAGCCAAGAAAACAATG+GGG | - | chr1.1:12968301-12968320 | MS.gene31729:intron | 40.0% | |
| GAGAAGAGCCAAGAAAACAA+TGG | - | chr1.1:12968299-12968318 | MS.gene31729:intron | 40.0% | |
| GAGATGAGTCAGGATTCATT+CGG | - | chr1.1:12968790-12968809 | MS.gene31729:CDS | 40.0% | |
| GATAAAGAACGAACCCTTTC+GGG | + | chr1.1:12970480-12970499 | None:intergenic | 40.0% | |
| GCTTTCGATCAGACAAGTTT+CGG | + | chr1.1:12965421-12965440 | None:intergenic | 40.0% | |
| GGAGACAAAAAGTTCTTCTG+TGG | - | chr1.1:12967347-12967366 | MS.gene31729:CDS | 40.0% | |
| GGATAAAGAACGAACCCTTT+CGG | + | chr1.1:12970481-12970500 | None:intergenic | 40.0% | |
| GGTAGGATATCTCTGTAAGT+GGG | + | chr1.1:12965714-12965733 | None:intergenic | 40.0% | |
| GTAGGATATCTCTGTAAGTG+GGG | + | chr1.1:12965713-12965732 | None:intergenic | 40.0% | |
| GTCGACTACAACAGTATAGA+AGG | + | chr1.1:12966255-12966274 | None:intergenic | 40.0% | |
| GTCTGGTACAACACTATTAG+TGG | - | chr1.1:12965027-12965046 | MS.gene31729:intron | 40.0% | |
| GTGAGTGATTATGATTCTCC+TGG | - | chr1.1:12967697-12967716 | MS.gene31729:intron | 40.0% | |
| GTTTCTTCCTTAACATCAGC+GGG | + | chr1.1:12965915-12965934 | None:intergenic | 40.0% | |
| TAAAGATCTAAACCACGGTC+AGG | + | chr1.1:12968638-12968657 | None:intergenic | 40.0% | |
| TACTGTGAAGCTTGAAGAAG+TGG | - | chr1.1:12966900-12966919 | MS.gene31729:intron | 40.0% | |
| TATTTGTGTTATCCTCCTCG+TGG | + | chr1.1:12967931-12967950 | None:intergenic | 40.0% | |
| TCACTCAAGCTATCAGAAGA+TGG | - | chr1.1:12965972-12965991 | MS.gene31729:intron | 40.0% | |
| TCAGTGATAGTAATCTTCCC+AGG | - | chr1.1:12964263-12964282 | MS.gene31729:CDS | 40.0% | |
| TCATTCTATTCGTGCATTCC+AGG | - | chr1.1:12966784-12966803 | MS.gene31729:CDS | 40.0% | |
| TCTAATCAGGCAACTGCAAT+AGG | - | chr1.1:12966070-12966089 | MS.gene31729:intron | 40.0% | |
| TCTGTAAGTGGGTAATCTGT+TGG | + | chr1.1:12965380-12965399 | None:intergenic | 40.0% | |
| TGACGAAGAAACAACCAAGA+AGG | - | chr1.1:12964132-12964151 | MS.gene31729:CDS | 40.0% | |
| TGGTACATCGTAAGTGATGA+AGG | + | chr1.1:12970230-12970249 | None:intergenic | 40.0% | |
| TGGTAGGATATCTCTGTAAG+TGG | + | chr1.1:12965715-12965734 | None:intergenic | 40.0% | |
| TGGTTTAGTAGCTGCTTCAA+GGG | - | chr1.1:12969471-12969490 | MS.gene31729:intron | 40.0% | |
| TGTCGTGTTCATGTTAGTGT+CGG | - | chr1.1:12965564-12965583 | MS.gene31729:intron | 40.0% | |
| TGTTGTGGGAACCGAAAAAA+GGG | + | chr1.1:12970297-12970316 | None:intergenic | 40.0% | |
| TTCAATATGGGAGATGAGTC+AGG | - | chr1.1:12968780-12968799 | MS.gene31729:CDS | 40.0% | |
| TTGCTCAAGAAATCATCCCT+GGG | + | chr1.1:12964283-12964302 | None:intergenic | 40.0% | |
| TTGTTGTGGGAACCGAAAAA+AGG | + | chr1.1:12970298-12970317 | None:intergenic | 40.0% | |
| TTTCAACCTAAGCACCTTAG+CGG | - | chr1.1:12965271-12965290 | MS.gene31729:intron | 40.0% | |
| TTTGCTCAAGAAATCATCCC+TGG | + | chr1.1:12964284-12964303 | None:intergenic | 40.0% | |
| ! | CACAATTTTACTGGTACTGC+CGG | + | chr1.1:12964492-12964511 | None:intergenic | 40.0% |
| ! | CCGGTACTTCACAATTTTAC+TGG | + | chr1.1:12964501-12964520 | None:intergenic | 40.0% |
| ! | CGTAAATTGTTGGTTGTCAC+CGG | - | chr1.1:12970390-12970409 | MS.gene31729:intron | 40.0% |
| ! | CTTTTTGTCTCCAACATGAC+GGG | + | chr1.1:12967339-12967358 | None:intergenic | 40.0% |
| ! | GATTTCAGGTCAACAGTGTT+CGG | - | chr1.1:12967309-12967328 | MS.gene31729:CDS | 40.0% |
| ! | GGCAGAAGATTTCTAAAGAG+AGG | + | chr1.1:12970184-12970203 | None:intergenic | 40.0% |
| ! | GGGTTTTTGCTCATCTGTTT+TGG | + | chr1.1:12968123-12968142 | None:intergenic | 40.0% |
| ! | GTCTGTTTGGTTCAAACAAG+AGG | + | chr1.1:12969110-12969129 | None:intergenic | 40.0% |
| ! | TATCTTGTTTACCACGAAGC+TGG | + | chr1.1:12969191-12969210 | None:intergenic | 40.0% |
| ! | TTTTTGTCTCCAACATGACG+GGG | + | chr1.1:12967338-12967357 | None:intergenic | 40.0% |
| !! | AAAGTTTTAGCAACCGAGGA+AGG | - | chr1.1:12969220-12969239 | MS.gene31729:intron | 40.0% |
| !! | AGAGAAAGTTTTAGCAACCG+AGG | - | chr1.1:12969216-12969235 | MS.gene31729:intron | 40.0% |
| !! | GATGCGAAAGCATCTTAAGT+TGG | - | chr1.1:12965875-12965894 | MS.gene31729:CDS | 40.0% |
| !! | GGTGTGACTCGATTTTTAAG+CGG | - | chr1.1:12965178-12965197 | MS.gene31729:intron | 40.0% |
| !! | GTAAAATTGTGAAGTACCGG+CGG | - | chr1.1:12964501-12964520 | MS.gene31729:intron | 40.0% |
| !! | GTTTCGGTGCTACAAAGTTT+AGG | + | chr1.1:12965405-12965424 | None:intergenic | 40.0% |
| !! | TCAATTACCTCTTCTGGCTT+GGG | + | chr1.1:12966838-12966857 | None:intergenic | 40.0% |
| !! | TCAGAAGTTTGGTGATGTGA+AGG | - | chr1.1:12968442-12968461 | MS.gene31729:intron | 40.0% |
| !! | TCTTGTTTGGTTCTGTGTGT+TGG | - | chr1.1:12970416-12970435 | MS.gene31729:CDS | 40.0% |
| !!! | CTCTATTTTTTGGGATCACC+GGG | - | chr1.1:12969281-12969300 | MS.gene31729:intron | 40.0% |
| !!! | CTGTTTTTTTCCCAGTTTCC+TGG | + | chr1.1:12968364-12968383 | None:intergenic | 40.0% |
| !!! | TCTATTTTTTGGGATCACCG+GGG | - | chr1.1:12969282-12969301 | MS.gene31729:intron | 40.0% |
| AACCAGTTTCGCATCTGCTA+CGG | - | chr1.1:12970341-12970360 | MS.gene31729:intron | 45.0% | |
| AACCATCTCCAAAGAAAGGG+AGG | + | chr1.1:12970580-12970599 | None:intergenic | 45.0% | |
| AATAAGTCTCGGGGTCTGTT+TGG | + | chr1.1:12969123-12969142 | None:intergenic | 45.0% | |
| ACAGAACCAAACAAGATCGC+CGG | + | chr1.1:12970412-12970431 | None:intergenic | 45.0% | |
| ACCAACGACACGAATTGTTG+TGG | + | chr1.1:12970312-12970331 | None:intergenic | 45.0% | |
| ACCTGCTCAATTACCTCTTC+TGG | + | chr1.1:12966844-12966863 | None:intergenic | 45.0% | |
| AGAGACAATGATTCTGGACG+AGG | - | chr1.1:12969395-12969414 | MS.gene31729:intron | 45.0% | |
| AGATGGTTGCGGTTCTATGT+TGG | - | chr1.1:12970592-12970611 | MS.gene31729:CDS | 45.0% | |
| ATCCCCACAACACATCTTTG+GGG | - | chr1.1:12965230-12965249 | MS.gene31729:intron | 45.0% | |
| ATCTTCCGTACCTGTTGCAT+AGG | - | chr1.1:12964732-12964751 | MS.gene31729:intron | 45.0% | |
| ATGCAACATAGGTCGATGTC+TGG | - | chr1.1:12964779-12964798 | MS.gene31729:intron | 45.0% | |
| ATGCTTTCGCATCCGATTGA+AGG | + | chr1.1:12965868-12965887 | None:intergenic | 45.0% | |
| CAACTCCTGTTGTCAACGTT+GGG | + | chr1.1:12965602-12965621 | None:intergenic | 45.0% | |
| CAATCCCCACAACACATCTT+TGG | - | chr1.1:12965228-12965247 | MS.gene31729:intron | 45.0% | |
| CAATGGAGTGAACGAAGGAA+AGG | - | chr1.1:12968208-12968227 | MS.gene31729:intron | 45.0% | |
| CCAACGACACGAATTGTTGT+GGG | + | chr1.1:12970311-12970330 | None:intergenic | 45.0% | |
| CCCCGAGACTTATTCTTGAT+TGG | - | chr1.1:12969129-12969148 | MS.gene31729:intron | 45.0% | |
| CGCAACCATCTCCAAAGAAA+GGG | + | chr1.1:12970583-12970602 | None:intergenic | 45.0% | |
| CTATGGTGCACAAGTGAGAT+AGG | - | chr1.1:12964898-12964917 | MS.gene31729:intron | 45.0% | |
| CTGGTTTAGTAGCTGCTTCA+AGG | - | chr1.1:12969470-12969489 | MS.gene31729:intron | 45.0% | |
| CTGTTGGGACTTTCTTCCTT+TGG | - | chr1.1:12968491-12968510 | MS.gene31729:intron | 45.0% | |
| CTTCTTCGGTCAATATGCCA+AGG | - | chr1.1:12966927-12966946 | MS.gene31729:intron | 45.0% | |
| CTTGGCATATTGACCGAAGA+AGG | + | chr1.1:12966929-12966948 | None:intergenic | 45.0% | |
| GAAGAAGTGGAGTCCTTCTT+CGG | - | chr1.1:12966913-12966932 | MS.gene31729:intron | 45.0% | |
| GACATCGACCTATGTTGCAT+AGG | + | chr1.1:12964779-12964798 | None:intergenic | 45.0% | |
| GATGGTTGCGGTTCTATGTT+GGG | - | chr1.1:12970593-12970612 | MS.gene31729:CDS | 45.0% | |
| GATGTACCAACATGCAACGA+TGG | - | chr1.1:12970241-12970260 | MS.gene31729:intron | 45.0% | |
| GCAAGAGAAAAATGGGGTGA+AGG | - | chr1.1:12968253-12968272 | MS.gene31729:intron | 45.0% | |
| GCGGCGAAAAAGGTCTAAAA+CGG | + | chr1.1:12970516-12970535 | None:intergenic | 45.0% | |
| GCTACTCTAGATCCAGTTAC+CGG | - | chr1.1:12968897-12968916 | MS.gene31729:intron | 45.0% | |
| GTATACGGTACCTATGCAAC+AGG | + | chr1.1:12964745-12964764 | None:intergenic | 45.0% | |
| GTTTCGAAAAAAAGGGGGTG+AGG | + | chr1.1:12970208-12970227 | None:intergenic | 45.0% | |
| TACTAAGCCCGCTGATGTTA+AGG | - | chr1.1:12965905-12965924 | MS.gene31729:CDS | 45.0% | |
| TCAACTCCTGTTGTCAACGT+TGG | + | chr1.1:12965603-12965622 | None:intergenic | 45.0% | |
| TGAAGCATGGCCTATGATTC+TGG | - | chr1.1:12967119-12967138 | MS.gene31729:intron | 45.0% | |
| TGATGTGTCAGAATCGTGTC+TGG | - | chr1.1:12965529-12965548 | MS.gene31729:CDS | 45.0% | |
| TGTCAGACACAGACATGTGT+TGG | + | chr1.1:12965455-12965474 | None:intergenic | 45.0% | |
| ! | AAATCGAGTCACACCGACTA+AGG | + | chr1.1:12965173-12965192 | None:intergenic | 45.0% |
| ! | AGTTTGAGTTTCACTACCCC+CGG | + | chr1.1:12969302-12969321 | None:intergenic | 45.0% |
| ! | CCTTTCTTTGGAGATGGTTG+CGG | - | chr1.1:12970581-12970600 | MS.gene31729:CDS | 45.0% |
| ! | CTCAATTACCTCTTCTGGCT+TGG | + | chr1.1:12966839-12966858 | None:intergenic | 45.0% |
| ! | GCGAAAAAGGTCTAAAACGG+TGG | + | chr1.1:12970513-12970532 | None:intergenic | 45.0% |
| ! | GGTTTGGTTGAAACCCGAAA+GGG | - | chr1.1:12970464-12970483 | MS.gene31729:CDS | 45.0% |
| ! | TAATCTCCGCTAAGGTGCTT+AGG | + | chr1.1:12965280-12965299 | None:intergenic | 45.0% |
| ! | TTTTAAGCGGCTGACCTTGT+GGG | - | chr1.1:12965191-12965210 | MS.gene31729:intron | 45.0% |
| !! | AGTTTGTTGGGATGCTCTGT+GGG | - | chr1.1:12965668-12965687 | MS.gene31729:intron | 45.0% |
| !! | TAGTTTGTTGGGATGCTCTG+TGG | - | chr1.1:12965667-12965686 | MS.gene31729:intron | 45.0% |
| !! | TCTGTGTGTTGGCTTCTCAA+TGG | - | chr1.1:12970427-12970446 | MS.gene31729:CDS | 45.0% |
| !! | TGGTTTGGTTGAAACCCGAA+AGG | - | chr1.1:12970463-12970482 | MS.gene31729:CDS | 45.0% |
| !! | TTATACCTTTTCAGGGGAGG+AGG | - | chr1.1:12969338-12969357 | MS.gene31729:intron | 45.0% |
| !! | TTTTTAAGCGGCTGACCTTG+TGG | - | chr1.1:12965190-12965209 | MS.gene31729:intron | 45.0% |
| !!! | CTATTTTTTGGGATCACCGG+GGG | - | chr1.1:12969283-12969302 | MS.gene31729:intron | 45.0% |
| !! | ATATTATTATAATTTCTTAT+AGG | - | chr1.1:12967546-12967565 | MS.gene31729:intron | 5.0% |
| !!! | ATTTTTAAAAAATTAAAGTT+TGG | + | chr1.1:12964706-12964725 | None:intergenic | 5.0% |
| !!! | TATATATATTTTTTTTTTGA+AGG | + | chr1.1:12966973-12966992 | None:intergenic | 5.0% |
| !!! | TTATTTAAATTTTTTTAACA+GGG | - | chr1.1:12969891-12969910 | MS.gene31729:intron | 5.0% |
| !!! | TTTATTTAAATTTTTTTAAC+AGG | - | chr1.1:12969890-12969909 | MS.gene31729:intron | 5.0% |
| !!! | TTTTTAAAAAATTAAAGTTT+GGG | + | chr1.1:12964705-12964724 | None:intergenic | 5.0% |
| AACCGAAAAAAGGGTGGTGC+AGG | + | chr1.1:12970288-12970307 | None:intergenic | 50.0% | |
| AACGAAGGAAAGGAGGCTGA+AGG | - | chr1.1:12968218-12968237 | MS.gene31729:intron | 50.0% | |
| AAGAGAGGGCAGAGCCATAA+TGG | + | chr1.1:12970169-12970188 | None:intergenic | 50.0% | |
| AAGTCCCAACAGCTGGAGAA+CGG | + | chr1.1:12968483-12968502 | None:intergenic | 50.0% | |
| AATGTATCCCGTGCTTGGCA+CGG | + | chr1.1:12969871-12969890 | None:intergenic | 50.0% | |
| ACCAGTTTCGCATCTGCTAC+GGG | - | chr1.1:12970342-12970361 | MS.gene31729:intron | 50.0% | |
| ACCATAACCAATCCACACGG+CGG | + | chr1.1:12970535-12970554 | None:intergenic | 50.0% | |
| ACCGAAAAAAGGGTGGTGCA+GGG | + | chr1.1:12970287-12970306 | None:intergenic | 50.0% | |
| AGCCAAGAAAACAATGGGGC+AGG | - | chr1.1:12968305-12968324 | MS.gene31729:intron | 50.0% | |
| AGGAAGAAAGTCCCAACAGC+TGG | + | chr1.1:12968490-12968509 | None:intergenic | 50.0% | |
| AGTTGAACATACGCCCTTGC+GGG | - | chr1.1:12965617-12965636 | MS.gene31729:intron | 50.0% | |
| ATCTCTGTAAGTGGGGCCTT+TGG | + | chr1.1:12965706-12965725 | None:intergenic | 50.0% | |
| CATTACTCGGAGGCTAAGGT+TGG | + | chr1.1:12967060-12967079 | None:intergenic | 50.0% | |
| CCCACAACAATTCGTGTCGT+TGG | - | chr1.1:12970308-12970327 | MS.gene31729:intron | 50.0% | |
| CCCACCATAACCAATCCACA+CGG | + | chr1.1:12970538-12970557 | None:intergenic | 50.0% | |
| CCGCAACCATCTCCAAAGAA+AGG | + | chr1.1:12970584-12970603 | None:intergenic | 50.0% | |
| CCTCCCCAAAGATGTGTTGT+GGG | + | chr1.1:12965236-12965255 | None:intergenic | 50.0% | |
| CGGTACCTATGCAACAGGTA+CGG | + | chr1.1:12964740-12964759 | None:intergenic | 50.0% | |
| CTCCAAAGAAAGGGAGGAGA+CGG | + | chr1.1:12970574-12970593 | None:intergenic | 50.0% | |
| CTCCCCAAAGATGTGTTGTG+GGG | + | chr1.1:12965235-12965254 | None:intergenic | 50.0% | |
| GAAAACAATGGGGCAGGTGA+AGG | - | chr1.1:12968311-12968330 | MS.gene31729:intron | 50.0% | |
| GAGTTGAACATACGCCCTTG+CGG | - | chr1.1:12965616-12965635 | MS.gene31729:intron | 50.0% | |
| GCATCATTACTCGGAGGCTA+AGG | + | chr1.1:12967064-12967083 | None:intergenic | 50.0% | |
| GCCAGAAGAGGTAATTGAGC+AGG | - | chr1.1:12966840-12966859 | MS.gene31729:CDS | 50.0% | |
| GGGTTTCAACCAAACCAACG+CGG | + | chr1.1:12970460-12970479 | None:intergenic | 50.0% | |
| GGTGAAGGAAAGGTGACTGA+AGG | - | chr1.1:12968326-12968345 | MS.gene31729:intron | 50.0% | |
| GGTTTCAACCAAACCAACGC+GGG | + | chr1.1:12970459-12970478 | None:intergenic | 50.0% | |
| GTTTCAACCAAACCAACGCG+GGG | + | chr1.1:12970458-12970477 | None:intergenic | 50.0% | |
| TAGCAACCGAGGAAGGTAAG+TGG | - | chr1.1:12969227-12969246 | MS.gene31729:intron | 50.0% | |
| TCCTCAGCAGCAACTTCAGA+GGG | + | chr1.1:12968143-12968162 | None:intergenic | 50.0% | |
| TCGAAAAAAAGGGGGTGAGG+TGG | + | chr1.1:12970205-12970224 | None:intergenic | 50.0% | |
| TGAACTTCCCAAGCCAGAAG+AGG | - | chr1.1:12966828-12966847 | MS.gene31729:CDS | 50.0% | |
| TGCATTCCAGGGAGCAAAGT+TGG | - | chr1.1:12966796-12966815 | MS.gene31729:CDS | 50.0% | |
| TGGAGTGAACGAAGGAAAGG+AGG | - | chr1.1:12968211-12968230 | MS.gene31729:intron | 50.0% | |
| TGTGGGAACCGAAAAAAGGG+TGG | + | chr1.1:12970294-12970313 | None:intergenic | 50.0% | |
| TGTGTTATCCTCCTCGTGGT+TGG | + | chr1.1:12967927-12967946 | None:intergenic | 50.0% | |
| TTCCTCAGCAGCAACTTCAG+AGG | + | chr1.1:12968144-12968163 | None:intergenic | 50.0% | |
| TTCGCACCATCGTTGCATGT+TGG | + | chr1.1:12970250-12970269 | None:intergenic | 50.0% | |
| TTGTCACCGGCGATCTTGTT+TGG | - | chr1.1:12970403-12970422 | MS.gene31729:intron | 50.0% | |
| TTTAAGCGGCTGACCTTGTG+GGG | - | chr1.1:12965192-12965211 | MS.gene31729:intron | 50.0% | |
| TTTCCCGTTCTCCAGCTGTT+GGG | - | chr1.1:12968476-12968495 | MS.gene31729:intron | 50.0% | |
| ! | CACAACACATCTTTGGGGAG+GGG | - | chr1.1:12965235-12965254 | MS.gene31729:intron | 50.0% |
| ! | CACCTGCCCCATTGTTTTCT+TGG | + | chr1.1:12968310-12968329 | None:intergenic | 50.0% |
| ! | CCACAACACATCTTTGGGGA+GGG | - | chr1.1:12965234-12965253 | MS.gene31729:intron | 50.0% |
| ! | CTCCTCCCTTTCTTTGGAGA+TGG | - | chr1.1:12970575-12970594 | MS.gene31729:CDS | 50.0% |
| ! | GGTGGTGGTTGTTGAGTTGT+TGG | - | chr1.1:12970363-12970382 | MS.gene31729:intron | 50.0% |
| ! | GTTTGTTGGGATGCTCTGTG+GGG | - | chr1.1:12965669-12965688 | MS.gene31729:intron | 50.0% |
| ! | TAAGCCCCCCTTTTCCGAAA+GGG | + | chr1.1:12968859-12968878 | None:intergenic | 50.0% |
| ! | TGTCTGATCGAAAGCGTGTC+CGG | - | chr1.1:12965426-12965445 | MS.gene31729:intron | 50.0% |
| ! | TTAGGTGAGTTGGGTCCCTT+GGG | - | chr1.1:12965304-12965323 | MS.gene31729:intron | 50.0% |
| ! | TTTAGGTGAGTTGGGTCCCT+TGG | - | chr1.1:12965303-12965322 | MS.gene31729:intron | 50.0% |
| ! | TTTTCCCGTTCTCCAGCTGT+TGG | - | chr1.1:12968475-12968494 | MS.gene31729:intron | 50.0% |
| !! | CCGTGTGGATTGGTTATGGT+GGG | - | chr1.1:12970535-12970554 | MS.gene31729:intron | 50.0% |
| !! | GTGACTGAAGGTGCCGAAAA+GGG | - | chr1.1:12968338-12968357 | MS.gene31729:intron | 50.0% |
| !! | TGTTAGTGTCGGTGCTTCAC+AGG | - | chr1.1:12965575-12965594 | MS.gene31729:intron | 50.0% |
| AAGACTGTCTTACGCCCCAC+AGG | + | chr1.1:12967768-12967787 | None:intergenic | 55.0% | |
| AATAGCAGTCCTCCCCCACA+AGG | + | chr1.1:12965208-12965227 | None:intergenic | 55.0% | |
| AATCCACACGGCGGCGAAAA+AGG | + | chr1.1:12970526-12970545 | None:intergenic | 55.0% | |
| ACCCGTAGCAGATGCGAAAC+TGG | + | chr1.1:12970346-12970365 | None:intergenic | 55.0% | |
| ACCTTACCCTAGTCAGCCCA+AGG | + | chr1.1:12965323-12965342 | None:intergenic | 55.0% | |
| ACCTTCCTCCTCCCCTGAAA+AGG | + | chr1.1:12969346-12969365 | None:intergenic | 55.0% | |
| AGTCCCAACAGCTGGAGAAC+GGG | + | chr1.1:12968482-12968501 | None:intergenic | 55.0% | |
| AGTTTCGCATCTGCTACGGG+TGG | - | chr1.1:12970345-12970364 | MS.gene31729:intron | 55.0% | |
| ATCCTGCCAACTTTGCTCCC+TGG | + | chr1.1:12966805-12966824 | None:intergenic | 55.0% | |
| ATGTATCCCGTGCTTGGCAC+GGG | + | chr1.1:12969870-12969889 | None:intergenic | 55.0% | |
| CAAAGAAAGGGAGGAGACGG+CGG | + | chr1.1:12970571-12970590 | None:intergenic | 55.0% | |
| CAATACTGGAGCCAGCTTCG+TGG | - | chr1.1:12969177-12969196 | MS.gene31729:intron | 55.0% | |
| CAATGGGGCAGGTGAAGGAA+AGG | - | chr1.1:12968316-12968335 | MS.gene31729:intron | 55.0% | |
| CAGGTCCCAACGTTGACAAC+AGG | - | chr1.1:12965594-12965613 | MS.gene31729:intron | 55.0% | |
| CCCTCCCCAAAGATGTGTTG+TGG | + | chr1.1:12965237-12965256 | None:intergenic | 55.0% | |
| CCGAAAAAAGGGTGGTGCAG+GGG | + | chr1.1:12970286-12970305 | None:intergenic | 55.0% | |
| CCGAAAAGGGCCAGGAAACT+GGG | - | chr1.1:12968351-12968370 | MS.gene31729:intron | 55.0% | |
| CCTTACCCTAGTCAGCCCAA+GGG | + | chr1.1:12965322-12965341 | None:intergenic | 55.0% | |
| CGAAAAAAGGGTGGTGCAGG+GGG | + | chr1.1:12970285-12970304 | None:intergenic | 55.0% | |
| CGAGAAAAAGTGGAGTCCCG+CGG | + | chr1.1:12964547-12964566 | None:intergenic | 55.0% | |
| CGAGCTTTCTGAGCAGCTTC+AGG | + | chr1.1:12968825-12968844 | None:intergenic | 55.0% | |
| CTAGGGTAAGGTAGGCCTCA+AGG | - | chr1.1:12965331-12965350 | MS.gene31729:CDS | 55.0% | |
| CTGCAGCCCTTTCGGAAAAG+GGG | - | chr1.1:12968850-12968869 | MS.gene31729:CDS | 55.0% | |
| GAATGTGGGTTCCAACCACG+AGG | - | chr1.1:12967913-12967932 | MS.gene31729:CDS | 55.0% | |
| GCTGCAGCCCTTTCGGAAAA+GGG | - | chr1.1:12968849-12968868 | MS.gene31729:CDS | 55.0% | |
| GGAGGCTGAAGGCGAAGAAA+AGG | - | chr1.1:12968229-12968248 | MS.gene31729:intron | 55.0% | |
| GTTGAACATACGCCCTTGCG+GGG | - | chr1.1:12965618-12965637 | MS.gene31729:intron | 55.0% | |
| TGCAACGATGGTGCGAAGAG+TGG | - | chr1.1:12970253-12970272 | MS.gene31729:intron | 55.0% | |
| TGCAGCCCTTTCGGAAAAGG+GGG | - | chr1.1:12968851-12968870 | MS.gene31729:CDS | 55.0% | |
| TGCTGCAGCCCTTTCGGAAA+AGG | - | chr1.1:12968848-12968867 | MS.gene31729:CDS | 55.0% | |
| TGGGCTGACTAGGGTAAGGT+AGG | - | chr1.1:12965323-12965342 | MS.gene31729:intron | 55.0% | |
| TTAAGCGGCTGACCTTGTGG+GGG | - | chr1.1:12965193-12965212 | MS.gene31729:intron | 55.0% | |
| TTCAGGGGAGGAGGAAGGTA+TGG | - | chr1.1:12969347-12969366 | MS.gene31729:intron | 55.0% | |
| TTCCAGGGAGCAAAGTTGGC+AGG | - | chr1.1:12966800-12966819 | MS.gene31729:CDS | 55.0% | |
| ! | AAGTTGGCTCATACCCCGCA+AGG | + | chr1.1:12965634-12965653 | None:intergenic | 55.0% |
| ! | AGTTGGCTCATACCCCGCAA+GGG | + | chr1.1:12965633-12965652 | None:intergenic | 55.0% |
| ! | CACAGACATGTGTTGGCCAC+CGG | + | chr1.1:12965448-12965467 | None:intergenic | 55.0% |
| ! | CCCACAACACATCTTTGGGG+AGG | - | chr1.1:12965233-12965252 | MS.gene31729:intron | 55.0% |
| ! | CCCAGTTTCCTGGCCCTTTT+CGG | + | chr1.1:12968354-12968373 | None:intergenic | 55.0% |
| ! | CTAAGCCCCCCTTTTCCGAA+AGG | + | chr1.1:12968860-12968879 | None:intergenic | 55.0% |
| ! | GGAGGAAGGTATGGTAGAGG+AGG | - | chr1.1:12969356-12969375 | MS.gene31729:intron | 55.0% |
| ! | GGAGGAGGAAGGTATGGTAG+AGG | - | chr1.1:12969353-12969372 | MS.gene31729:intron | 55.0% |
| ! | TTTTTCGCCGCCGTGTGGAT+TGG | - | chr1.1:12970525-12970544 | MS.gene31729:intron | 55.0% |
| !! | ACCCTCTGAAGTTGCTGCTG+AGG | - | chr1.1:12968139-12968158 | MS.gene31729:intron | 55.0% |
| !! | ACCTTTTCAGGGGAGGAGGA+AGG | - | chr1.1:12969342-12969361 | MS.gene31729:intron | 55.0% |
| !! | CGGGCGCTGAGCTAGAATTA+AGG | - | chr1.1:12967438-12967457 | MS.gene31729:intron | 55.0% |
| !! | GCCGTGTGGATTGGTTATGG+TGG | - | chr1.1:12970534-12970553 | MS.gene31729:intron | 55.0% |
| !! | GGTGACTGAAGGTGCCGAAA+AGG | - | chr1.1:12968337-12968356 | MS.gene31729:intron | 55.0% |
| !! | TGCGTGCCACTTACCTTCCT+CGG | + | chr1.1:12969236-12969255 | None:intergenic | 55.0% |
| !!! | CCCCTGCACCACCCTTTTTT+CGG | - | chr1.1:12970283-12970302 | MS.gene31729:intron | 55.0% |
| CCCTTGGGCTGACTAGGGTA+AGG | - | chr1.1:12965319-12965338 | MS.gene31729:intron | 60.0% | |
| CGCCGTCTCCTCCCTTTCTT+TGG | - | chr1.1:12970569-12970588 | MS.gene31729:intron | 60.0% | |
| GCAGCCCTTTCGGAAAAGGG+GGG | - | chr1.1:12968852-12968871 | MS.gene31729:CDS | 60.0% | |
| GCCGAAAAGGGCCAGGAAAC+TGG | - | chr1.1:12968350-12968369 | MS.gene31729:intron | 60.0% | |
| GTTCGGTTGCCCCGTCATGT+TGG | - | chr1.1:12967326-12967345 | MS.gene31729:CDS | 60.0% | |
| TCAATGGCAGAACCCCGCGT+TGG | - | chr1.1:12970443-12970462 | MS.gene31729:CDS | 60.0% | |
| TCAGCGCTCTGTGAGCCTTG+AGG | + | chr1.1:12965349-12965368 | None:intergenic | 60.0% | |
| TGGGGCCACTGTGGTACCAA+AGG | - | chr1.1:12965687-12965706 | MS.gene31729:intron | 60.0% | |
| TGGGGCCTTTGGTACCACAG+TGG | + | chr1.1:12965695-12965714 | None:intergenic | 60.0% | |
| TGGGTCCCTTGGGCTGACTA+GGG | - | chr1.1:12965314-12965333 | MS.gene31729:intron | 60.0% | |
| TGTATCCCGTGCTTGGCACG+GGG | + | chr1.1:12969869-12969888 | None:intergenic | 60.0% | |
| TGTGGGTTCCAACCACGAGG+AGG | - | chr1.1:12967916-12967935 | MS.gene31729:intron | 60.0% | |
| TTCGCATCTGCTACGGGTGG+TGG | - | chr1.1:12970348-12970367 | MS.gene31729:intron | 60.0% | |
| TTGGGTCCCTTGGGCTGACT+AGG | - | chr1.1:12965313-12965332 | MS.gene31729:intron | 60.0% | |
| ! | CTGATCGAAAGCGTGTCCGG+TGG | - | chr1.1:12965429-12965448 | MS.gene31729:intron | 60.0% |
| ! | TCGTGCTGCTGCAGCCCTTT+CGG | - | chr1.1:12968842-12968861 | MS.gene31729:CDS | 60.0% |
| !! | AGACCTTTTTCGCCGCCGTG+TGG | - | chr1.1:12970520-12970539 | MS.gene31729:intron | 60.0% |
| !! | GCCGCCGTGTGGATTGGTTA+TGG | - | chr1.1:12970531-12970550 | MS.gene31729:intron | 60.0% |
| !! | TGAAGGTGCCGAAAAGGGCC+AGG | - | chr1.1:12968343-12968362 | MS.gene31729:intron | 60.0% |
| !! | TGTGAAGTACCGGCGGTACC+AGG | - | chr1.1:12964508-12964527 | MS.gene31729:intron | 60.0% |
| AAGTGGAGTCCCGCGGTACC+AGG | + | chr1.1:12964540-12964559 | None:intergenic | 65.0% | |
| AGGCACGTACCTGGTACCGC+CGG | + | chr1.1:12964520-12964539 | None:intergenic | 65.0% | |
| AGGTACGTGCCTGGTACCGC+GGG | - | chr1.1:12964528-12964547 | MS.gene31729:intron | 65.0% | |
| CAGGTACGTGCCTGGTACCG+CGG | - | chr1.1:12964527-12964546 | MS.gene31729:intron | 65.0% | |
| GATGCTCTGTGGGGCCACTG+TGG | - | chr1.1:12965678-12965697 | MS.gene31729:intron | 65.0% | |
| GTAACGCCCCGTGCCAAGCA+CGG | - | chr1.1:12969860-12969879 | MS.gene31729:intron | 65.0% | |
| TAACGCCCCGTGCCAAGCAC+GGG | - | chr1.1:12969861-12969880 | MS.gene31729:intron | 65.0% | |
| !! | GGCAGAACCCCGCGTTGGTT+TGG | - | chr1.1:12970448-12970467 | MS.gene31729:CDS | 65.0% |
| AGCGGCTGACCTTGTGGGGG+AGG | - | chr1.1:12965196-12965215 | MS.gene31729:intron | 70.0% | |
| CGCGGTACCAGGCACGTACC+TGG | + | chr1.1:12964529-12964548 | None:intergenic | 70.0% | |
| GGCGGTACCAGGTACGTGCC+TGG | - | chr1.1:12964519-12964538 | MS.gene31729:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 12964115 | 12970625 | 12964115 | ID=MS.gene31729 |
| chr1.1 | mRNA | 12964115 | 12970625 | 12964115 | ID=MS.gene31729.t1;Parent=MS.gene31729 |
| chr1.1 | exon | 12970575 | 12970625 | 12970575 | ID=MS.gene31729.t1.exon1;Parent=MS.gene31729.t1 |
| chr1.1 | CDS | 12970575 | 12970625 | 12970575 | ID=cds.MS.gene31729.t1;Parent=MS.gene31729.t1 |
| chr1.1 | exon | 12970412 | 12970490 | 12970412 | ID=MS.gene31729.t1.exon2;Parent=MS.gene31729.t1 |
| chr1.1 | CDS | 12970412 | 12970490 | 12970412 | ID=cds.MS.gene31729.t1;Parent=MS.gene31729.t1 |
| chr1.1 | exon | 12968747 | 12968899 | 12968747 | ID=MS.gene31729.t1.exon3;Parent=MS.gene31729.t1 |
| chr1.1 | CDS | 12968747 | 12968899 | 12968747 | ID=cds.MS.gene31729.t1;Parent=MS.gene31729.t1 |
| chr1.1 | exon | 12967792 | 12967934 | 12967792 | ID=MS.gene31729.t1.exon4;Parent=MS.gene31729.t1 |
| chr1.1 | CDS | 12967792 | 12967934 | 12967792 | ID=cds.MS.gene31729.t1;Parent=MS.gene31729.t1 |
| chr1.1 | exon | 12967275 | 12967423 | 12967275 | ID=MS.gene31729.t1.exon5;Parent=MS.gene31729.t1 |
| chr1.1 | CDS | 12967275 | 12967423 | 12967275 | ID=cds.MS.gene31729.t1;Parent=MS.gene31729.t1 |
| chr1.1 | exon | 12966780 | 12966884 | 12966780 | ID=MS.gene31729.t1.exon6;Parent=MS.gene31729.t1 |
| chr1.1 | CDS | 12966780 | 12966884 | 12966780 | ID=cds.MS.gene31729.t1;Parent=MS.gene31729.t1 |
| chr1.1 | exon | 12966277 | 12966697 | 12966277 | ID=MS.gene31729.t1.exon7;Parent=MS.gene31729.t1 |
| chr1.1 | CDS | 12966277 | 12966697 | 12966277 | ID=cds.MS.gene31729.t1;Parent=MS.gene31729.t1 |
| chr1.1 | exon | 12965822 | 12965969 | 12965822 | ID=MS.gene31729.t1.exon8;Parent=MS.gene31729.t1 |
| chr1.1 | CDS | 12965822 | 12965969 | 12965822 | ID=cds.MS.gene31729.t1;Parent=MS.gene31729.t1 |
| chr1.1 | exon | 12965499 | 12965577 | 12965499 | ID=MS.gene31729.t1.exon9;Parent=MS.gene31729.t1 |
| chr1.1 | CDS | 12965499 | 12965577 | 12965499 | ID=cds.MS.gene31729.t1;Parent=MS.gene31729.t1 |
| chr1.1 | exon | 12965324 | 12965388 | 12965324 | ID=MS.gene31729.t1.exon10;Parent=MS.gene31729.t1 |
| chr1.1 | CDS | 12965324 | 12965388 | 12965324 | ID=cds.MS.gene31729.t1;Parent=MS.gene31729.t1 |
| chr1.1 | exon | 12964115 | 12964287 | 12964115 | ID=MS.gene31729.t1.exon11;Parent=MS.gene31729.t1 |
| chr1.1 | CDS | 12964115 | 12964287 | 12964115 | ID=cds.MS.gene31729.t1;Parent=MS.gene31729.t1 |
| Gene Sequence |
| Protein sequence |
