Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32419.t1 | XP_013466257.1 | 89.2 | 482 | 43 | 1 | 1 | 473 | 1 | 482 | 1.30E-182 | 649.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32419.t1 | Q93ZV7 | 53.1 | 475 | 165 | 7 | 6 | 472 | 6 | 430 | 4.8e-98 | 359.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32419.t1 | A0A072VFS9 | 89.2 | 482 | 43 | 1 | 1 | 473 | 1 | 482 | 9.1e-183 | 649.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049207 | MS.gene32419 | 0.832419 | 9.56E-56 | -1.69E-46 |
| MS.gene049255 | MS.gene32419 | 0.815433 | 9.27E-52 | -1.69E-46 |
| MS.gene049343 | MS.gene32419 | 0.807506 | 4.89E-50 | -1.69E-46 |
| MS.gene049473 | MS.gene32419 | 0.822397 | 2.42E-53 | -1.69E-46 |
| MS.gene049666 | MS.gene32419 | 0.815425 | 9.31E-52 | -1.69E-46 |
| MS.gene049824 | MS.gene32419 | 0.853585 | 2.17E-61 | -1.69E-46 |
| MS.gene049825 | MS.gene32419 | 0.869974 | 2.07E-66 | -1.69E-46 |
| MS.gene049873 | MS.gene32419 | 0.866627 | 2.48E-65 | -1.69E-46 |
| MS.gene050277 | MS.gene32419 | 0.817787 | 2.75E-52 | -1.69E-46 |
| MS.gene050303 | MS.gene32419 | 0.825983 | 3.48E-54 | -1.69E-46 |
| MS.gene050427 | MS.gene32419 | 0.816673 | 4.90E-52 | -1.69E-46 |
| MS.gene050689 | MS.gene32419 | 0.806353 | 8.57E-50 | -1.69E-46 |
| MS.gene050916 | MS.gene32419 | 0.800198 | 1.61E-48 | -1.69E-46 |
| MS.gene051328 | MS.gene32419 | 0.811692 | 6.16E-51 | -1.69E-46 |
| MS.gene05134 | MS.gene32419 | 0.844074 | 9.47E-59 | -1.69E-46 |
| MS.gene051700 | MS.gene32419 | 0.821571 | 3.76E-53 | -1.69E-46 |
| MS.gene051791 | MS.gene32419 | 0.814877 | 1.23E-51 | -1.69E-46 |
| MS.gene05188 | MS.gene32419 | 0.85183 | 6.87E-61 | -1.69E-46 |
| MS.gene051975 | MS.gene32419 | 0.818113 | 2.32E-52 | -1.69E-46 |
| MS.gene052519 | MS.gene32419 | 0.825121 | 5.57E-54 | -1.69E-46 |
| MS.gene052582 | MS.gene32419 | 0.817676 | 2.91E-52 | -1.69E-46 |
| MS.gene052584 | MS.gene32419 | 0.837078 | 6.43E-57 | -1.69E-46 |
| MS.gene052717 | MS.gene32419 | 0.823554 | 1.30E-53 | -1.69E-46 |
| MS.gene052947 | MS.gene32419 | 0.846137 | 2.62E-59 | -1.69E-46 |
| MS.gene053058 | MS.gene32419 | 0.801658 | 8.12E-49 | -1.69E-46 |
| MS.gene053080 | MS.gene32419 | 0.83443 | 3.01E-56 | -1.69E-46 |
| MS.gene053122 | MS.gene32419 | 0.880507 | 5.19E-70 | -1.69E-46 |
| MS.gene053195 | MS.gene32419 | 0.81146 | 6.92E-51 | -1.69E-46 |
| MS.gene053226 | MS.gene32419 | 0.872239 | 3.70E-67 | -1.69E-46 |
| MS.gene053294 | MS.gene32419 | 0.811823 | 5.77E-51 | -1.69E-46 |
| MS.gene053492 | MS.gene32419 | 0.821573 | 3.76E-53 | -1.69E-46 |
| MS.gene05364 | MS.gene32419 | 0.819218 | 1.30E-52 | -1.69E-46 |
| MS.gene053995 | MS.gene32419 | 0.808651 | 2.79E-50 | -1.69E-46 |
| MS.gene054328 | MS.gene32419 | 0.802235 | 6.18E-49 | -1.69E-46 |
| MS.gene054651 | MS.gene32419 | 0.826848 | 2.17E-54 | -1.69E-46 |
| MS.gene05517 | MS.gene32419 | 0.807269 | 5.49E-50 | -1.69E-46 |
| MS.gene05548 | MS.gene32419 | 0.803621 | 3.19E-49 | -1.69E-46 |
| MS.gene055512 | MS.gene32419 | 0.80172 | 7.88E-49 | -1.69E-46 |
| MS.gene055555 | MS.gene32419 | 0.859815 | 3.19E-63 | -1.69E-46 |
| MS.gene055580 | MS.gene32419 | -0.81879 | 1.63E-52 | -1.69E-46 |
| MS.gene055778 | MS.gene32419 | 0.807167 | 5.77E-50 | -1.69E-46 |
| MS.gene055808 | MS.gene32419 | 0.870138 | 1.83E-66 | -1.69E-46 |
| MS.gene055841 | MS.gene32419 | 0.806547 | 7.80E-50 | -1.69E-46 |
| MS.gene056043 | MS.gene32419 | -0.809049 | 2.29E-50 | -1.69E-46 |
| MS.gene056091 | MS.gene32419 | 0.863548 | 2.30E-64 | -1.69E-46 |
| MS.gene056215 | MS.gene32419 | 0.834084 | 3.68E-56 | -1.69E-46 |
| MS.gene056403 | MS.gene32419 | 0.836836 | 7.41E-57 | -1.69E-46 |
| MS.gene056605 | MS.gene32419 | 0.827243 | 1.74E-54 | -1.69E-46 |
| MS.gene056631 | MS.gene32419 | 0.827405 | 1.59E-54 | -1.69E-46 |
| MS.gene05689 | MS.gene32419 | 0.868063 | 8.63E-66 | -1.69E-46 |
| MS.gene056986 | MS.gene32419 | 0.813114 | 3.01E-51 | -1.69E-46 |
| MS.gene057102 | MS.gene32419 | 0.825497 | 4.54E-54 | -1.69E-46 |
| MS.gene057705 | MS.gene32419 | 0.860381 | 2.15E-63 | -1.69E-46 |
| MS.gene05781 | MS.gene32419 | 0.814065 | 1.86E-51 | -1.69E-46 |
| MS.gene058037 | MS.gene32419 | 0.803064 | 4.17E-49 | -1.69E-46 |
| MS.gene058625 | MS.gene32419 | 0.807154 | 5.81E-50 | -1.69E-46 |
| MS.gene058783 | MS.gene32419 | 0.829514 | 4.93E-55 | -1.69E-46 |
| MS.gene059146 | MS.gene32419 | 0.827894 | 1.22E-54 | -1.69E-46 |
| MS.gene05953 | MS.gene32419 | 0.812294 | 4.56E-51 | -1.69E-46 |
| MS.gene05954 | MS.gene32419 | 0.844985 | 5.38E-59 | -1.69E-46 |
| MS.gene05978 | MS.gene32419 | 0.813121 | 3.01E-51 | -1.69E-46 |
| MS.gene059842 | MS.gene32419 | 0.818732 | 1.68E-52 | -1.69E-46 |
| MS.gene05985 | MS.gene32419 | -0.826451 | 2.69E-54 | -1.69E-46 |
| MS.gene059901 | MS.gene32419 | -0.842698 | 2.21E-58 | -1.69E-46 |
| MS.gene059935 | MS.gene32419 | 0.891776 | 2.92E-74 | -1.69E-46 |
| MS.gene06001 | MS.gene32419 | 0.826958 | 2.04E-54 | -1.69E-46 |
| MS.gene06011 | MS.gene32419 | 0.811476 | 6.87E-51 | -1.69E-46 |
| MS.gene060365 | MS.gene32419 | 0.824199 | 9.19E-54 | -1.69E-46 |
| MS.gene060429 | MS.gene32419 | 0.891622 | 3.36E-74 | -1.69E-46 |
| MS.gene060586 | MS.gene32419 | 0.810728 | 9.98E-51 | -1.69E-46 |
| MS.gene060763 | MS.gene32419 | 0.864864 | 8.95E-65 | -1.69E-46 |
| MS.gene060830 | MS.gene32419 | 0.876223 | 1.66E-68 | -1.69E-46 |
| MS.gene060917 | MS.gene32419 | 0.836389 | 9.63E-57 | -1.69E-46 |
| MS.gene060935 | MS.gene32419 | 0.811835 | 5.74E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene32419 | MS.gene63973 | PPI |
| MS.gene32419 | MS.gene29720 | PPI |
| MS.gene32419 | MS.gene002675 | PPI |
| MS.gene43604 | MS.gene32419 | PPI |
| MS.gene32419 | MS.gene51112 | PPI |
| MS.gene32419 | MS.gene067809 | PPI |
| MS.gene002676 | MS.gene32419 | PPI |
| MS.gene05791 | MS.gene32419 | PPI |
| MS.gene32419 | MS.gene004357 | PPI |
| MS.gene32419 | MS.gene064459 | PPI |
| MS.gene08205 | MS.gene32419 | PPI |
| MS.gene051451 | MS.gene32419 | PPI |
| MS.gene32419 | MS.gene05792 | PPI |
| MS.gene32419 | MS.gene27028 | PPI |
| MS.gene65076 | MS.gene32419 | PPI |
| MS.gene32419 | MS.gene35157 | PPI |
| MS.gene028300 | MS.gene32419 | PPI |
| MS.gene32419 | MS.gene43614 | PPI |
| MS.gene51868 | MS.gene32419 | PPI |
| MS.gene32419 | MS.gene36492 | PPI |
| MS.gene24199 | MS.gene32419 | PPI |
| MS.gene66089 | MS.gene32419 | PPI |
| MS.gene32419 | MS.gene023154 | PPI |
| MS.gene32419 | MS.gene94182 | PPI |
| MS.gene98888 | MS.gene32419 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32419.t1 | MTR_1g026890 | 97.510 | 482 | 3 | 1 | 1 | 473 | 1 | 482 | 0.0 | 943 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32419.t1 | AT4G32720 | 51.204 | 457 | 157 | 9 | 1 | 445 | 1 | 403 | 2.94e-143 | 416 |
| MS.gene32419.t1 | AT4G32720 | 51.810 | 442 | 152 | 8 | 1 | 430 | 1 | 393 | 2.44e-141 | 412 |
| MS.gene32419.t1 | AT1G79880 | 42.217 | 424 | 181 | 11 | 5 | 427 | 4 | 364 | 4.09e-96 | 296 |
| MS.gene32419.t1 | AT1G79880 | 39.142 | 373 | 163 | 11 | 56 | 427 | 1 | 310 | 1.54e-69 | 225 |
| MS.gene32419.t1 | AT1G79880 | 38.701 | 385 | 167 | 12 | 56 | 434 | 1 | 322 | 2.69e-69 | 225 |
| MS.gene32419.t1 | AT2G43970 | 29.452 | 146 | 88 | 2 | 2 | 147 | 185 | 315 | 3.63e-12 | 68.9 |
| MS.gene32419.t1 | AT5G46250 | 27.074 | 229 | 123 | 9 | 8 | 209 | 101 | 312 | 3.71e-12 | 68.6 |
| MS.gene32419.t1 | AT2G43970 | 29.452 | 146 | 88 | 2 | 2 | 147 | 185 | 315 | 4.33e-12 | 68.6 |
| MS.gene32419.t1 | AT5G46250 | 29.940 | 167 | 92 | 5 | 8 | 166 | 101 | 250 | 7.06e-12 | 67.0 |
| MS.gene32419.t1 | AT5G46250 | 29.940 | 167 | 92 | 5 | 8 | 166 | 101 | 250 | 7.95e-12 | 67.0 |
Find 89 sgRNAs with CRISPR-Local
Find 353 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATACTTTCTATATTTATTT+TGG | 0.150399 | 1.4:+12713344 | None:intergenic |
| CGTGCTTTCTGAGCAGCTTC+AGG | 0.270223 | 1.4:+12713943 | None:intergenic |
| AAGGCTATAACTAAGCCTTT+AGG | 0.286449 | 1.4:+12714718 | None:intergenic |
| GCCGAAAAGGGCCAGGAAAC+TGG | 0.288268 | 1.4:-12714415 | MS.gene32419:CDS |
| ACCTGCTCAATTACCTCTTC+TGG | 0.299485 | 1.4:+12715919 | None:intergenic |
| AACCTGTCGTATAACCTTCT+TGG | 0.309750 | 1.4:+12718592 | None:intergenic |
| CTCAATTACCTCTTCTGGCT+TGG | 0.321742 | 1.4:+12715924 | None:intergenic |
| AGGCTATAACTAAGCCTTTA+GGG | 0.335538 | 1.4:+12714719 | None:intergenic |
| AAGGTTGTGTTTCAGAAGTT+TGG | 0.339229 | 1.4:-12714334 | MS.gene32419:CDS |
| ACGTGCTGCTGCAGCCCTTT+CGG | 0.339660 | 1.4:-12713923 | MS.gene32419:CDS |
| TGCTGCAGCCCTTTCGGAAA+AGG | 0.341335 | 1.4:-12713917 | MS.gene32419:CDS |
| CGTAATAGAGACAATGATTC+TGG | 0.344136 | 1.4:-12713376 | MS.gene32419:CDS |
| AAGTAAAACTAACCGGTAAC+TGG | 0.344730 | 1.4:+12713856 | None:intergenic |
| CTTTGCTTTGTTCCTTCAAT+CGG | 0.350383 | 1.4:-12716901 | MS.gene32419:CDS |
| ACAGTACATAGATTTCAATA+TGG | 0.354619 | 1.4:-12713998 | MS.gene32419:intron |
| TAACTACACAGTGGTTAGTT+TGG | 0.362858 | 1.4:-12716924 | MS.gene32419:intron |
| GCTGCAGCCCTTTCGGAAAA+GGG | 0.363306 | 1.4:-12713916 | MS.gene32419:CDS |
| TGAACTGCTCTTTAGTTTGA+AGG | 0.365442 | 1.4:+12714699 | None:intergenic |
| TCAATTACCTCTTCTGGCTT+GGG | 0.381807 | 1.4:+12715925 | None:intergenic |
| TGCGTGCCACTTACCTTCCT+CGG | 0.406995 | 1.4:+12713532 | None:intergenic |
| TACTAAGCCCGCTGATGTTA+AGG | 0.409561 | 1.4:-12716849 | MS.gene32419:CDS |
| TTCAATATGGGAGATGAGTC+AGG | 0.414927 | 1.4:-12713985 | MS.gene32419:CDS |
| AGAAGAGCCAAGAAAACAAT+GGG | 0.421708 | 1.4:-12714465 | MS.gene32419:CDS |
| GGAGGCTGAAGGCGAAGAAA+AGG | 0.425040 | 1.4:-12714536 | MS.gene32419:CDS |
| CGGGCGCTGAGCTAGAATTA+AGG | 0.430112 | 1.4:-12715327 | MS.gene32419:CDS |
| ATGCTTTCGCATCCGATTGA+AGG | 0.433367 | 1.4:+12716889 | None:intergenic |
| GAAGAAGTGGAGTCCTTCTT+CGG | 0.441428 | 1.4:-12715847 | MS.gene32419:CDS |
| GATTTCAGGTCAACAGTGTT+CGG | 0.445081 | 1.4:-12715456 | MS.gene32419:intron |
| GCTACTCTAGATCCAGTTAC+CGG | 0.447734 | 1.4:-12713868 | MS.gene32419:intron |
| CTTGGCATATTGACCGAAGA+AGG | 0.449259 | 1.4:+12715834 | None:intergenic |
| AAATGGGGTGAAGGAAGAAA+AGG | 0.452338 | 1.4:-12714503 | MS.gene32419:CDS |
| GGAGGAGGAAGGTATGGTAG+AGG | 0.458576 | 1.4:-12713412 | MS.gene32419:CDS |
| TTTACTCAAGAAATCATCCC+TGG | 0.462095 | 1.4:+12718456 | None:intergenic |
| TGCATTCCAGGGAGCAAAGT+TGG | 0.464023 | 1.4:-12715964 | MS.gene32419:intron |
| TACTGTGAAGCTTGAAGAAG+TGG | 0.465343 | 1.4:-12715860 | MS.gene32419:CDS |
| GGTGACTGAAGGTGCCGAAA+AGG | 0.481831 | 1.4:-12714428 | MS.gene32419:CDS |
| TATCTTGTTTACCACGAAGC+TGG | 0.484324 | 1.4:+12713577 | None:intergenic |
| AGCTTCACAGTATATTCAAA+TGG | 0.487645 | 1.4:+12715871 | None:intergenic |
| CAGTACATAGATTTCAATAT+GGG | 0.489907 | 1.4:-12713997 | MS.gene32419:CDS |
| TGTGTTATCCTCCTCGTGGT+TGG | 0.492162 | 1.4:+12714841 | None:intergenic |
| TTCAGGGGAGGAGGAAGGTA+TGG | 0.496516 | 1.4:-12713418 | MS.gene32419:intron |
| CTGCAGCCCTTTCGGAAAAG+GGG | 0.498607 | 1.4:-12713915 | MS.gene32419:CDS |
| TTCCAGGGAGCAAAGTTGGC+AGG | 0.499364 | 1.4:-12715960 | MS.gene32419:intron |
| TGTCTTACGTGAAGATTTGA+AGG | 0.499878 | 1.4:-12714353 | MS.gene32419:CDS |
| GCCAGAAGAGGTAATTGAGC+AGG | 0.508078 | 1.4:-12715920 | MS.gene32419:CDS |
| TGAAGGTGCCGAAAAGGGCC+AGG | 0.512350 | 1.4:-12714422 | MS.gene32419:CDS |
| CCGAAAAGGGCCAGGAAACT+GGG | 0.514402 | 1.4:-12714414 | MS.gene32419:CDS |
| ACTGTCAATGAAAGTGAAGA+TGG | 0.515278 | 1.4:-12718433 | MS.gene32419:CDS |
| TATTGTTACAGCTACCCTAA+AGG | 0.518011 | 1.4:-12714733 | MS.gene32419:intron |
| GTTTCTTCCTTAACATCAGC+GGG | 0.518351 | 1.4:+12716842 | None:intergenic |
| CTTTGACGCAGAAAGAGAAA+AGG | 0.519218 | 1.4:-12714903 | MS.gene32419:CDS |
| GTGACTGAAGGTGCCGAAAA+GGG | 0.521308 | 1.4:-12714427 | MS.gene32419:CDS |
| GTTCGGTTGCCCCGTCATGT+TGG | 0.521804 | 1.4:-12715439 | MS.gene32419:CDS |
| TGCAGCCCTTTCGGAAAAGG+GGG | 0.524299 | 1.4:-12713914 | MS.gene32419:CDS |
| TCCTCAGCAGCAACTTCAGA+GGG | 0.526503 | 1.4:+12714625 | None:intergenic |
| AGCCAAGAAAACAATGGGGC+AGG | 0.526829 | 1.4:-12714460 | MS.gene32419:CDS |
| CAATACTGGAGCCAGCTTCG+TGG | 0.527832 | 1.4:-12713588 | MS.gene32419:CDS |
| TCAGTGATAGTAATCTTCCC+AGG | 0.528131 | 1.4:-12718474 | MS.gene32419:CDS |
| ACCCTCTGAAGTTGCTGCTG+AGG | 0.528326 | 1.4:-12714626 | MS.gene32419:CDS |
| GGAGGAAGGTATGGTAGAGG+AGG | 0.530321 | 1.4:-12713409 | MS.gene32419:CDS |
| GAAAACAATGGGGCAGGTGA+AGG | 0.536070 | 1.4:-12714454 | MS.gene32419:CDS |
| GAGATGAGTCAGGATTCATT+CGG | 0.541514 | 1.4:-12713975 | MS.gene32419:CDS |
| AACCAAGAAGGTTATACGAC+AGG | 0.543197 | 1.4:-12718594 | MS.gene32419:intron |
| TCACTCAAGCTATCAGAAGA+TGG | 0.556963 | 1.4:-12716782 | MS.gene32419:intron |
| GATGCGAAAGCATCTTAAGC+TGG | 0.567013 | 1.4:-12716879 | MS.gene32419:CDS |
| CAATGGGGCAGGTGAAGGAA+AGG | 0.574806 | 1.4:-12714449 | MS.gene32419:CDS |
| TTCCTCAGCAGCAACTTCAG+AGG | 0.588125 | 1.4:+12714624 | None:intergenic |
| CATCTGATGAGAACTCAACA+AGG | 0.591422 | 1.4:+12715389 | None:intergenic |
| GAGAAGAGCCAAGAAAACAA+TGG | 0.592496 | 1.4:-12714466 | MS.gene32419:CDS |
| CAATGGAGTGAACGAAGGAA+AGG | 0.592633 | 1.4:-12714557 | MS.gene32419:CDS |
| TCAGAAGTTTGGTGATGTGA+AGG | 0.592670 | 1.4:-12714323 | MS.gene32419:intron |
| CAGTGATAGTAATCTTCCCA+GGG | 0.596203 | 1.4:-12718473 | MS.gene32419:CDS |
| GCAGCCCTTTCGGAAAAGGG+GGG | 0.596520 | 1.4:-12713913 | MS.gene32419:CDS |
| TTACTCAAGAAATCATCCCT+GGG | 0.601574 | 1.4:+12718457 | None:intergenic |
| TGACGAAGAAACAACCAAGA+AGG | 0.607861 | 1.4:-12718606 | MS.gene32419:CDS |
| TGAACTTCCCAAGCCAGAAG+AGG | 0.608914 | 1.4:-12715932 | MS.gene32419:CDS |
| AGAGACAATGATTCTGGACG+AGG | 0.611973 | 1.4:-12713370 | MS.gene32419:CDS |
| GACAATGATAAAGAAAACAA+TGG | 0.616572 | 1.4:-12714574 | MS.gene32419:CDS |
| GGTGAAGGAAAGGTGACTGA+AGG | 0.628219 | 1.4:-12714439 | MS.gene32419:CDS |
| AGTTTCTTCCTTAACATCAG+CGG | 0.630747 | 1.4:+12716841 | None:intergenic |
| CTTCTTCGGTCAATATGCCA+AGG | 0.638433 | 1.4:-12715833 | MS.gene32419:intron |
| AACGAAGGAAAGGAGGCTGA+AGG | 0.639810 | 1.4:-12714547 | MS.gene32419:CDS |
| TGGAGTGAACGAAGGAAAGG+AGG | 0.640717 | 1.4:-12714554 | MS.gene32419:CDS |
| TATTTGTGTTATCCTCCTCG+TGG | 0.654110 | 1.4:+12714837 | None:intergenic |
| GAAAACAATGGAGTGAACGA+AGG | 0.669742 | 1.4:-12714562 | MS.gene32419:CDS |
| ATCTGATGAGAACTCAACAA+GGG | 0.670020 | 1.4:+12715390 | None:intergenic |
| GAATGTGGGTTCCAACCACG+AGG | 0.704964 | 1.4:-12714852 | MS.gene32419:CDS |
| TGTGGGTTCCAACCACGAGG+AGG | 0.705081 | 1.4:-12714849 | MS.gene32419:CDS |
| GAAGAGCCAAGAAAACAATG+GGG | 0.727730 | 1.4:-12714464 | MS.gene32419:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTATTTAACAAAAATAGTT+TGG | - | chr1.4:12716417-12716436 | MS.gene32419:intron | 10.0% |
| !!! | AAATTGAAGTTTTTTATAAA+GGG | + | chr1.4:12716926-12716945 | None:intergenic | 10.0% |
| !!! | AATACTTTCTATATTTATTT+TGG | + | chr1.4:12718624-12718643 | None:intergenic | 10.0% |
| !!! | TTGTCTTTTTTTTATTTATT+TGG | - | chr1.4:12717763-12717782 | MS.gene32419:intron | 10.0% |
| !! | TAATATATGTATTTGTCAAA+TGG | + | chr1.4:12716814-12716833 | None:intergenic | 15.0% |
| !! | TATTAAAAAACTGTAATTGA+TGG | - | chr1.4:12716861-12716880 | MS.gene32419:CDS | 15.0% |
| !! | TGTATATTCATTAAATTTCT+TGG | - | chr1.4:12716288-12716307 | MS.gene32419:intron | 15.0% |
| !!! | AATTATATTAATACCTTTTC+AGG | - | chr1.4:12718530-12718549 | MS.gene32419:intron | 15.0% |
| !!! | ATTATATTAATACCTTTTCA+GGG | - | chr1.4:12718531-12718550 | MS.gene32419:intron | 15.0% |
| !!! | GAAATTGAAGTTTTTTATAA+AGG | + | chr1.4:12716927-12716946 | None:intergenic | 15.0% |
| !!! | GTTTATATTTTTAATGATGA+AGG | - | chr1.4:12715541-12715560 | MS.gene32419:intron | 15.0% |
| !! | AAAAATAGAGAAAATCATCA+AGG | + | chr1.4:12718471-12718490 | None:intergenic | 20.0% |
| !! | AACAGCATAATCTAAATTAA+TGG | + | chr1.4:12715620-12715639 | None:intergenic | 20.0% |
| !! | AATGAAATTTATATCTATCG+TGG | + | chr1.4:12715774-12715793 | None:intergenic | 20.0% |
| !! | ATAGATAAATATCAAACCAA+AGG | + | chr1.4:12717710-12717729 | None:intergenic | 20.0% |
| !! | ATATATTAACATTAATGCTG+TGG | - | chr1.4:12716192-12716211 | MS.gene32419:intron | 20.0% |
| !! | ATTTAAGAAAATTGAAGTAC+CGG | - | chr1.4:12713698-12713717 | MS.gene32419:intron | 20.0% |
| !! | GAAATAAGTAATAAGTTATG+TGG | + | chr1.4:12715967-12715986 | None:intergenic | 20.0% |
| !! | GAAGAAAATAAACTGATATT+AGG | + | chr1.4:12714307-12714326 | None:intergenic | 20.0% |
| !! | GTTAATACCAATAAAAAGTA+GGG | - | chr1.4:12714370-12714389 | MS.gene32419:CDS | 20.0% |
| !! | TACAACAATTATACACAAAA+TGG | + | chr1.4:12715239-12715258 | None:intergenic | 20.0% |
| !! | TAGATATAAATTTCATGTAG+TGG | + | chr1.4:12715735-12715754 | None:intergenic | 20.0% |
| !!! | ACATTTTTGTTTTTGATTTC+AGG | - | chr1.4:12716495-12716514 | MS.gene32419:intron | 20.0% |
| !!! | AGATTTCTTTAAGATAAATC+TGG | - | chr1.4:12716350-12716369 | MS.gene32419:intron | 20.0% |
| !!! | ATCTAATTTTTCAATCAGTT+GGG | - | chr1.4:12718136-12718155 | MS.gene32419:intron | 20.0% |
| !!! | ATTAATTTAGAGTTAATCGA+AGG | + | chr1.4:12715709-12715728 | None:intergenic | 20.0% |
| !!! | ATTACTTTGCTTTCATTTTA+TGG | + | chr1.4:12717200-12717219 | None:intergenic | 20.0% |
| !!! | CTTCAATTTTCTTAAATGAT+CGG | + | chr1.4:12713695-12713714 | None:intergenic | 20.0% |
| !!! | GATGATTTTCTCTATTTTTT+GGG | - | chr1.4:12718472-12718491 | MS.gene32419:CDS | 20.0% |
| !!! | TGATGATTTTCTCTATTTTT+TGG | - | chr1.4:12718471-12718490 | MS.gene32419:CDS | 20.0% |
| !!! | TTAGTGAATCATTAATTTTC+TGG | - | chr1.4:12715793-12715812 | MS.gene32419:intron | 20.0% |
| !!! | TTATATTAATACCTTTTCAG+GGG | - | chr1.4:12718532-12718551 | MS.gene32419:intron | 20.0% |
| !!! | TTTGTTTATCAATTTGGTTT+AGG | - | chr1.4:12713582-12713601 | MS.gene32419:CDS | 20.0% |
| ! | AAACCTTCAAATATTAACCA+CGG | + | chr1.4:12716386-12716405 | None:intergenic | 25.0% |
| ! | AACTCTAAATTAACGATAGA+TGG | - | chr1.4:12715594-12715613 | MS.gene32419:intron | 25.0% |
| ! | ACAGTACATAGATTTCAATA+TGG | - | chr1.4:12717967-12717986 | MS.gene32419:intron | 25.0% |
| ! | ACCAAATTGATAAACAAAAG+AGG | + | chr1.4:12713580-12713599 | None:intergenic | 25.0% |
| ! | ATTTAGATTATGCTGTTGTA+TGG | - | chr1.4:12715623-12715642 | MS.gene32419:intron | 25.0% |
| ! | ATTTATGTTGTTCTGTTGTA+TGG | - | chr1.4:12715655-12715674 | MS.gene32419:intron | 25.0% |
| ! | CAATCTATCCTATTCTTAAT+TGG | + | chr1.4:12715400-12715419 | None:intergenic | 25.0% |
| ! | CAGGTTATTAAAACAAAAGA+AGG | + | chr1.4:12717819-12717838 | None:intergenic | 25.0% |
| ! | CAGTACATAGATTTCAATAT+GGG | - | chr1.4:12717968-12717987 | MS.gene32419:intron | 25.0% |
| ! | CATTCTAACAGTATTATAGT+CGG | - | chr1.4:12716219-12716238 | MS.gene32419:intron | 25.0% |
| ! | CATTGATGTTAATATTACCT+TGG | + | chr1.4:12716152-12716171 | None:intergenic | 25.0% |
| ! | CCAAATTGATAAACAAAAGA+GGG | + | chr1.4:12713579-12713598 | None:intergenic | 25.0% |
| ! | CGTTAATACCAATAAAAAGT+AGG | - | chr1.4:12714369-12714388 | MS.gene32419:CDS | 25.0% |
| ! | GAATAATTAAGCAAAAACGA+CGG | + | chr1.4:12713404-12713423 | None:intergenic | 25.0% |
| ! | GACAATGATAAAGAAAACAA+TGG | - | chr1.4:12717391-12717410 | MS.gene32419:intron | 25.0% |
| ! | GAGACTTATTAATTAAATGG+TGG | + | chr1.4:12714175-12714194 | None:intergenic | 25.0% |
| ! | GATGTAAAAGTAAAACTAAC+CGG | + | chr1.4:12718119-12718138 | None:intergenic | 25.0% |
| ! | GTGATAAATTCATTCTAATC+AGG | - | chr1.4:12715268-12715287 | MS.gene32419:intron | 25.0% |
| ! | TGTATATATTTACTCAATGC+AGG | - | chr1.4:12717034-12717053 | MS.gene32419:intron | 25.0% |
| ! | TTATACACAAAATGGATGAA+TGG | + | chr1.4:12715231-12715250 | None:intergenic | 25.0% |
| ! | TTGATCAAATGAGAAGAAAT+TGG | + | chr1.4:12714976-12714995 | None:intergenic | 25.0% |
| !! | ATACATAAAGCATCATTACT+CGG | + | chr1.4:12716273-12716292 | None:intergenic | 25.0% |
| !! | CACTTGAAATTTTGTTCATT+GGG | - | chr1.4:12715869-12715888 | MS.gene32419:CDS | 25.0% |
| !! | TCACTTGAAATTTTGTTCAT+TGG | - | chr1.4:12715868-12715887 | MS.gene32419:CDS | 25.0% |
| !! | TTGCTTTCATTTTATGGTTA+GGG | + | chr1.4:12717194-12717213 | None:intergenic | 25.0% |
| !! | TTTGCTTTCATTTTATGGTT+AGG | + | chr1.4:12717195-12717214 | None:intergenic | 25.0% |
| !!! | ATTTGTTGTTGTTTTTGGAA+TGG | - | chr1.4:12714035-12714054 | MS.gene32419:intron | 25.0% |
| !!! | CAATTTGGTTTAGGTTTTTA+GGG | - | chr1.4:12713591-12713610 | MS.gene32419:CDS | 25.0% |
| !!! | CATCTAATTTTTCAATCAGT+TGG | - | chr1.4:12718135-12718154 | MS.gene32419:intron | 25.0% |
| !!! | CCATTCAATTCAATTTTAGT+GGG | - | chr1.4:12714095-12714114 | MS.gene32419:intron | 25.0% |
| !!! | CTAGTGACAATGATTTTTTA+TGG | - | chr1.4:12718197-12718216 | MS.gene32419:intron | 25.0% |
| !!! | GGTTTTGTTAATGTAATTGA+AGG | - | chr1.4:12713612-12713631 | MS.gene32419:intron | 25.0% |
| !!! | GTTACATTTGTTGTTGTTTT+TGG | - | chr1.4:12714030-12714049 | MS.gene32419:intron | 25.0% |
| !!! | TCAATTTGGTTTAGGTTTTT+AGG | - | chr1.4:12713590-12713609 | MS.gene32419:CDS | 25.0% |
| !!! | TGGATTTTGACAGAAAATAT+TGG | + | chr1.4:12716794-12716813 | None:intergenic | 25.0% |
| !!! | TTTGTTGTTGTTTTTGGAAT+GGG | - | chr1.4:12714036-12714055 | MS.gene32419:intron | 25.0% |
| AAAAGGAGCAAGAGAAAAAT+GGG | - | chr1.4:12717446-12717465 | MS.gene32419:intron | 30.0% | |
| AACCTTCAAATATTAACCAC+GGG | + | chr1.4:12716385-12716404 | None:intergenic | 30.0% | |
| AAGCAAAAATTAGTGTATGC+GGG | - | chr1.4:12716619-12716638 | MS.gene32419:intron | 30.0% | |
| AGCTTCACAGTATATTCAAA+TGG | + | chr1.4:12716097-12716116 | None:intergenic | 30.0% | |
| ATAAACAAAAGAGGGCAAAA+TGG | + | chr1.4:12713571-12713590 | None:intergenic | 30.0% | |
| ATCTATGAACATGCTTACTT+TGG | + | chr1.4:12716664-12716683 | None:intergenic | 30.0% | |
| ATTTACTAACTTCTACCTGT+GGG | - | chr1.4:12716950-12716969 | MS.gene32419:intron | 30.0% | |
| CACTAAAATGGCTAATTCTT+CGG | + | chr1.4:12714283-12714302 | None:intergenic | 30.0% | |
| CCCACTAAAATTGAATTGAA+TGG | + | chr1.4:12714098-12714117 | None:intergenic | 30.0% | |
| CTGATATTAGGACACTAAAA+TGG | + | chr1.4:12714295-12714314 | None:intergenic | 30.0% | |
| GAAAAATCTCGTAAGAATGT+GGG | - | chr1.4:12717099-12717118 | MS.gene32419:intron | 30.0% | |
| GAAGCAAAAATTAGTGTATG+CGG | - | chr1.4:12716618-12716637 | MS.gene32419:intron | 30.0% | |
| GGCGAGACTTATTAATTAAA+TGG | + | chr1.4:12714178-12714197 | None:intergenic | 30.0% | |
| TAATTAATAAGTCTCGCCAT+TGG | - | chr1.4:12714180-12714199 | MS.gene32419:intron | 30.0% | |
| TACCAATCAAGAATAAGTCT+CGG | + | chr1.4:12718334-12718353 | None:intergenic | 30.0% | |
| TAGGTACATGTATACGTATA+CGG | + | chr1.4:12713986-12714005 | None:intergenic | 30.0% | |
| TGAAAAATCTCGTAAGAATG+TGG | - | chr1.4:12717098-12717117 | MS.gene32419:intron | 30.0% | |
| TGAGTTAAAGATCTAAACCA+CGG | + | chr1.4:12717843-12717862 | None:intergenic | 30.0% | |
| TTCTTGATTGGTATGTAATC+AGG | - | chr1.4:12718341-12718360 | MS.gene32419:intron | 30.0% | |
| TTGAGTGCAATTACAAGTTT+CGG | + | chr1.4:12714706-12714725 | None:intergenic | 30.0% | |
| ! | AAATAGTTTGGAGTATAGTC+TGG | - | chr1.4:12716429-12716448 | MS.gene32419:intron | 30.0% |
| ! | ATAGTGGAAAAAAACTTGTC+TGG | - | chr1.4:12714236-12714255 | MS.gene32419:intron | 30.0% |
| ! | ATCACTATCGTGTTTTATGT+CGG | + | chr1.4:12713657-12713676 | None:intergenic | 30.0% |
| ! | ATTTTCCCTGGTTTACATTT+TGG | + | chr1.4:12714946-12714965 | None:intergenic | 30.0% |
| ! | GAGACTTTTTGATCTAATAG+TGG | - | chr1.4:12714220-12714239 | MS.gene32419:intron | 30.0% |
| ! | GCCATTCAATTCAATTTTAG+TGG | - | chr1.4:12714094-12714113 | MS.gene32419:intron | 30.0% |
| ! | GTATTTTCTCAAATTACTGC+CGG | - | chr1.4:12714731-12714750 | MS.gene32419:intron | 30.0% |
| ! | GTTAATTTAAAGTTAGCGAG+TGG | - | chr1.4:12715428-12715447 | MS.gene32419:CDS | 30.0% |
| ! | TCCTAAAGACTATAGTTTGT+TGG | - | chr1.4:12714866-12714885 | MS.gene32419:CDS | 30.0% |
| ! | TGCTTTCATTTTATGGTTAG+GGG | + | chr1.4:12717193-12717212 | None:intergenic | 30.0% |
| !! | CCCTCTTTTGTTTATCAATT+TGG | - | chr1.4:12713576-12713595 | MS.gene32419:CDS | 30.0% |
| !! | CCTAAAGACTATAGTTTGTT+GGG | - | chr1.4:12714867-12714886 | MS.gene32419:CDS | 30.0% |
| !! | TTTTGTTTGTTTGAAACTGC+AGG | - | chr1.4:12713456-12713475 | MS.gene32419:intron | 30.0% |
| !!! | AGGTTTACCCTACTTTTTAT+TGG | + | chr1.4:12714380-12714399 | None:intergenic | 30.0% |
| !!! | ATTTTAGTGGGTTAGTTCTA+TGG | - | chr1.4:12714107-12714126 | MS.gene32419:intron | 30.0% |
| !!! | ATTTTTTTCTCTCACTTTGC+TGG | - | chr1.4:12715374-12715393 | MS.gene32419:CDS | 30.0% |
| AAAGAGGGCAAAATGGTAAA+AGG | + | chr1.4:12713564-12713583 | None:intergenic | 35.0% | |
| AAAGGAGCAAGAGAAAAATG+GGG | - | chr1.4:12717447-12717466 | MS.gene32419:intron | 35.0% | |
| AAAGTAGGGTAAACCTTAGT+CGG | - | chr1.4:12714384-12714403 | MS.gene32419:CDS | 35.0% | |
| AAGGCTATAACTAAGCCTTT+AGG | + | chr1.4:12717250-12717269 | None:intergenic | 35.0% | |
| AAGTAAAACTAACCGGTAAC+TGG | + | chr1.4:12718112-12718131 | None:intergenic | 35.0% | |
| ACCAATCAAGAATAAGTCTC+GGG | + | chr1.4:12718333-12718352 | None:intergenic | 35.0% | |
| ACTGTCAATGAAAGTGAAGA+TGG | - | chr1.4:12713532-12713551 | MS.gene32419:intron | 35.0% | |
| AGAAGAGCCAAGAAAACAAT+GGG | - | chr1.4:12717500-12717519 | MS.gene32419:intron | 35.0% | |
| AGATTACTCTTTAGGTGAGT+TGG | - | chr1.4:12714521-12714540 | MS.gene32419:CDS | 35.0% | |
| AGGCTATAACTAAGCCTTTA+GGG | + | chr1.4:12717249-12717268 | None:intergenic | 35.0% | |
| AGTTTCTTCCTTAACATCAG+CGG | + | chr1.4:12715127-12715146 | None:intergenic | 35.0% | |
| ATCCCGTGGTTAATATTTGA+AGG | - | chr1.4:12716380-12716399 | MS.gene32419:intron | 35.0% | |
| ATCCTACCAAAATGTAAACC+AGG | - | chr1.4:12714937-12714956 | MS.gene32419:intron | 35.0% | |
| ATCTGATGAGAACTCAACAA+GGG | + | chr1.4:12716578-12716597 | None:intergenic | 35.0% | |
| CATTTACTAACTTCTACCTG+TGG | - | chr1.4:12716949-12716968 | MS.gene32419:intron | 35.0% | |
| CCAGTAAAATTGTGAAGTAC+CGG | - | chr1.4:12713726-12713745 | MS.gene32419:intron | 35.0% | |
| CCCAACAAACTATAGTCTTT+AGG | + | chr1.4:12714870-12714889 | None:intergenic | 35.0% | |
| CGTAATAGAGACAATGATTC+TGG | - | chr1.4:12718589-12718608 | MS.gene32419:intron | 35.0% | |
| CTAGAGCTTTGCAAAGAAAT+TGG | + | chr1.4:12715486-12715505 | None:intergenic | 35.0% | |
| CTCATGTTTACCAGAATCAT+AGG | + | chr1.4:12716332-12716351 | None:intergenic | 35.0% | |
| CTGAAATTCTAACTACACAG+TGG | - | chr1.4:12715032-12715051 | MS.gene32419:intron | 35.0% | |
| CTTGTAATTGCACTCAATTC+TGG | - | chr1.4:12714709-12714728 | MS.gene32419:CDS | 35.0% | |
| GAAAAGGAGCAAGAGAAAAA+TGG | - | chr1.4:12717445-12717464 | MS.gene32419:intron | 35.0% | |
| GAAACAAAATGTCACGTATG+TGG | + | chr1.4:12715932-12715951 | None:intergenic | 35.0% | |
| GATTACTCTTTAGGTGAGTT+GGG | - | chr1.4:12714522-12714541 | MS.gene32419:CDS | 35.0% | |
| GTGAAGCTGAAAAACAATAC+TGG | - | chr1.4:12718363-12718382 | MS.gene32419:intron | 35.0% | |
| TACATGTACCTATGCAACAT+AGG | - | chr1.4:12713994-12714013 | MS.gene32419:CDS | 35.0% | |
| TATATTTACTCAATGCAGGC+AGG | - | chr1.4:12717038-12717057 | MS.gene32419:intron | 35.0% | |
| TATTGTTACAGCTACCCTAA+AGG | - | chr1.4:12717232-12717251 | MS.gene32419:intron | 35.0% | |
| TCACATACATATGAGAGTGA+AGG | + | chr1.4:12714066-12714085 | None:intergenic | 35.0% | |
| TCACTCAAAACGAGAAAAAG+TGG | + | chr1.4:12713785-12713804 | None:intergenic | 35.0% | |
| TCATATCTCACTTGAACCAA+TGG | + | chr1.4:12714199-12714218 | None:intergenic | 35.0% | |
| TCCTACCAAAATGTAAACCA+GGG | - | chr1.4:12714938-12714957 | MS.gene32419:intron | 35.0% | |
| TCTTGTGTTTGTGTTTGTGT+CGG | - | chr1.4:12714775-12714794 | MS.gene32419:intron | 35.0% | |
| TGTCTTACGTGAAGATTTGA+AGG | - | chr1.4:12717612-12717631 | MS.gene32419:intron | 35.0% | |
| TTACTCAAGAAATCATCCCT+GGG | + | chr1.4:12713511-12713530 | None:intergenic | 35.0% | |
| TTTACTAACTTCTACCTGTG+GGG | - | chr1.4:12716951-12716970 | MS.gene32419:intron | 35.0% | |
| TTTACTCAAGAAATCATCCC+TGG | + | chr1.4:12713512-12713531 | None:intergenic | 35.0% | |
| TTTGCTGGCCAATTAAGAAT+AGG | - | chr1.4:12715389-12715408 | MS.gene32419:CDS | 35.0% | |
| ! | AAAGTTTAGGACTCTGTTAG+TGG | + | chr1.4:12714620-12714639 | None:intergenic | 35.0% |
| ! | AAGTTTAGGACTCTGTTAGT+GGG | + | chr1.4:12714619-12714638 | None:intergenic | 35.0% |
| ! | AATAGGATAGATTGCTGTTC+TGG | - | chr1.4:12715406-12715425 | MS.gene32419:CDS | 35.0% |
| ! | ACTTTTTGTCTCCAACATGA+CGG | + | chr1.4:12716540-12716559 | None:intergenic | 35.0% |
| ! | CTATAGTCTTTAGGAGAAGT+TGG | + | chr1.4:12714861-12714880 | None:intergenic | 35.0% |
| ! | CTTTGCTTTGTTCCTTCAAT+CGG | - | chr1.4:12715064-12715083 | MS.gene32419:intron | 35.0% |
| ! | GTCACGTCATTATTCTTTTC+TGG | + | chr1.4:12717301-12717320 | None:intergenic | 35.0% |
| ! | TAACTACACAGTGGTTAGTT+TGG | - | chr1.4:12715041-12715060 | MS.gene32419:intron | 35.0% |
| ! | TGAAACTCTCTAAGAGTAGA+TGG | - | chr1.4:12715825-12715844 | MS.gene32419:intron | 35.0% |
| ! | TGGTGATGTGAAGGTAAATA+TGG | - | chr1.4:12717651-12717670 | MS.gene32419:intron | 35.0% |
| !! | ATTGGAATGCTTATTTTCCC+TGG | + | chr1.4:12714958-12714977 | None:intergenic | 35.0% |
| !! | TAAGAAAATTGAAGTACCGG+CGG | - | chr1.4:12713701-12713720 | MS.gene32419:intron | 35.0% |
| !! | TATTAATACCTTTTCAGGGG+AGG | - | chr1.4:12718535-12718554 | MS.gene32419:intron | 35.0% |
| !! | TGAACTGCTCTTTAGTTTGA+AGG | + | chr1.4:12717269-12717288 | None:intergenic | 35.0% |
| !!! | GTTTTTTATAAAGGGATGCC+AGG | + | chr1.4:12716918-12716937 | None:intergenic | 35.0% |
| !!! | TCTCTATTTTTTGGGATCAC+CGG | - | chr1.4:12718480-12718499 | MS.gene32419:CDS | 35.0% |
| !!! | TTGTTTTAATAACCTGACCG+TGG | - | chr1.4:12717823-12717842 | MS.gene32419:intron | 35.0% |
| AAATGGGGTGAAGGAAGAAA+AGG | - | chr1.4:12717462-12717481 | MS.gene32419:intron | 40.0% | |
| AACCAAGAAGGTTATACGAC+AGG | - | chr1.4:12713371-12713390 | MS.gene32419:CDS | 40.0% | |
| AACCTGTCGTATAACCTTCT+TGG | + | chr1.4:12713376-12713395 | None:intergenic | 40.0% | |
| AATCCCCACAACACATCTTT+GGG | - | chr1.4:12714456-12714475 | MS.gene32419:CDS | 40.0% | |
| AATCTGGTATTTGAATCCCG+TGG | - | chr1.4:12716366-12716385 | MS.gene32419:intron | 40.0% | |
| CAGTGATAGTAATCTTCCCA+GGG | - | chr1.4:12713492-12713511 | MS.gene32419:intron | 40.0% | |
| CATCTGATGAGAACTCAACA+AGG | + | chr1.4:12716579-12716598 | None:intergenic | 40.0% | |
| CATTCTATTCGTGCATTCCA+GGG | - | chr1.4:12715990-12716009 | MS.gene32419:intron | 40.0% | |
| CCAATCAAGAATAAGTCTCG+GGG | + | chr1.4:12718332-12718351 | None:intergenic | 40.0% | |
| CTAAAGAGTAATCTCCGCTA+AGG | + | chr1.4:12714515-12714534 | None:intergenic | 40.0% | |
| CTTAGCGGAGATTACTCTTT+AGG | - | chr1.4:12714513-12714532 | MS.gene32419:CDS | 40.0% | |
| CTTGGTGAAAAGTTGAAGCA+TGG | - | chr1.4:12716306-12716325 | MS.gene32419:intron | 40.0% | |
| CTTTGACGCAGAAAGAGAAA+AGG | - | chr1.4:12717062-12717081 | MS.gene32419:intron | 40.0% | |
| GAAAACAATGGAGTGAACGA+AGG | - | chr1.4:12717403-12717422 | MS.gene32419:intron | 40.0% | |
| GAAGAGCCAAGAAAACAATG+GGG | - | chr1.4:12717501-12717520 | MS.gene32419:intron | 40.0% | |
| GAGAAGAGCCAAGAAAACAA+TGG | - | chr1.4:12717499-12717518 | MS.gene32419:intron | 40.0% | |
| GAGATGAGTCAGGATTCATT+CGG | - | chr1.4:12717990-12718009 | MS.gene32419:intron | 40.0% | |
| GCTTTCGATCAGACAAGTTT+CGG | + | chr1.4:12714649-12714668 | None:intergenic | 40.0% | |
| GGAGACAAAAAGTTCTTCTG+TGG | - | chr1.4:12716547-12716566 | MS.gene32419:intron | 40.0% | |
| GGTAGGATATCTCTGTAAGT+GGG | + | chr1.4:12714925-12714944 | None:intergenic | 40.0% | |
| GTAGGATATCTCTGTAAGTG+GGG | + | chr1.4:12714924-12714943 | None:intergenic | 40.0% | |
| GTCGACTACAACAGTATAGA+AGG | + | chr1.4:12715464-12715483 | None:intergenic | 40.0% | |
| GTCTGGTACAACACTATTAG+TGG | - | chr1.4:12714253-12714272 | MS.gene32419:intron | 40.0% | |
| GTGAGTGATTATGATTCTCC+TGG | - | chr1.4:12716897-12716916 | MS.gene32419:CDS | 40.0% | |
| GTTTCTTCCTTAACATCAGC+GGG | + | chr1.4:12715126-12715145 | None:intergenic | 40.0% | |
| TAAAGATCTAAACCACGGTC+AGG | + | chr1.4:12717838-12717857 | None:intergenic | 40.0% | |
| TACTGTGAAGCTTGAAGAAG+TGG | - | chr1.4:12716105-12716124 | MS.gene32419:intron | 40.0% | |
| TATTTGTGTTATCCTCCTCG+TGG | + | chr1.4:12717131-12717150 | None:intergenic | 40.0% | |
| TCACTCAAGCTATCAGAAGA+TGG | - | chr1.4:12715183-12715202 | MS.gene32419:intron | 40.0% | |
| TCAGTGATAGTAATCTTCCC+AGG | - | chr1.4:12713491-12713510 | MS.gene32419:intron | 40.0% | |
| TCATTCTATTCGTGCATTCC+AGG | - | chr1.4:12715989-12716008 | MS.gene32419:intron | 40.0% | |
| TCTAATCAGGCAACTGCAAT+AGG | - | chr1.4:12715281-12715300 | MS.gene32419:intron | 40.0% | |
| TGACGAAGAAACAACCAAGA+AGG | - | chr1.4:12713359-12713378 | MS.gene32419:CDS | 40.0% | |
| TGGTAGGATATCTCTGTAAG+TGG | + | chr1.4:12714926-12714945 | None:intergenic | 40.0% | |
| TGTCAGTCACAAACATGTGT+TGG | + | chr1.4:12714683-12714702 | None:intergenic | 40.0% | |
| TTCAATATGGGAGATGAGTC+AGG | - | chr1.4:12717980-12717999 | MS.gene32419:intron | 40.0% | |
| TTTCAACCTAAGCACCTTAG+CGG | - | chr1.4:12714498-12714517 | MS.gene32419:CDS | 40.0% | |
| ! | CATAAAGCATCATTACTCGG+AGG | + | chr1.4:12716270-12716289 | None:intergenic | 40.0% |
| ! | CCGGTACTTCACAATTTTAC+TGG | + | chr1.4:12713729-12713748 | None:intergenic | 40.0% |
| ! | CTTTTTGTCTCCAACATGAC+GGG | + | chr1.4:12716539-12716558 | None:intergenic | 40.0% |
| ! | GATTTCAGGTCAACAGTGTT+CGG | - | chr1.4:12716509-12716528 | MS.gene32419:intron | 40.0% |
| ! | GGGTTTTTGCTCATCTGTTT+TGG | + | chr1.4:12717323-12717342 | None:intergenic | 40.0% |
| ! | GTCTGTTTGGTTCAAACAAG+AGG | + | chr1.4:12718310-12718329 | None:intergenic | 40.0% |
| ! | TATCTTGTTTACCACGAAGC+TGG | + | chr1.4:12718391-12718410 | None:intergenic | 40.0% |
| ! | TCTGTTAGTGGGTAATCTGT+TGG | + | chr1.4:12714608-12714627 | None:intergenic | 40.0% |
| ! | TTTTTGTCTCCAACATGACG+GGG | + | chr1.4:12716538-12716557 | None:intergenic | 40.0% |
| !! | AAAGTTTTAGCAACCGAGGA+AGG | - | chr1.4:12718420-12718439 | MS.gene32419:intron | 40.0% |
| !! | AGAGAAAGTTTTAGCAACCG+AGG | - | chr1.4:12718416-12718435 | MS.gene32419:intron | 40.0% |
| !! | CGATTTTGACACATCAACAC+CGG | + | chr1.4:12714753-12714772 | None:intergenic | 40.0% |
| !! | GGTGTGACTCGATTTTTAAG+CGG | - | chr1.4:12714405-12714424 | MS.gene32419:CDS | 40.0% |
| !! | GTAAAATTGTGAAGTACCGG+TGG | - | chr1.4:12713729-12713748 | MS.gene32419:intron | 40.0% |
| !! | GTTTCGGTGCTACAAAGTTT+AGG | + | chr1.4:12714633-12714652 | None:intergenic | 40.0% |
| !! | TCAATTACCTCTTCTGGCTT+GGG | + | chr1.4:12716043-12716062 | None:intergenic | 40.0% |
| !! | TCAGAAGTTTGGTGATGTGA+AGG | - | chr1.4:12717642-12717661 | MS.gene32419:intron | 40.0% |
| !! | TCCCTGGTTTACATTTTGGT+AGG | + | chr1.4:12714942-12714961 | None:intergenic | 40.0% |
| !!! | CTCTATTTTTTGGGATCACC+GGG | - | chr1.4:12718481-12718500 | MS.gene32419:CDS | 40.0% |
| !!! | CTGTTTTTTTCCCAGTTTCC+TGG | + | chr1.4:12717564-12717583 | None:intergenic | 40.0% |
| !!! | TCTATTTTTTGGGATCACCG+GGG | - | chr1.4:12718482-12718501 | MS.gene32419:CDS | 40.0% |
| AATAAGTCTCGGGGTCTGTT+TGG | + | chr1.4:12718323-12718342 | None:intergenic | 45.0% | |
| ACCTGCTCAATTACCTCTTC+TGG | + | chr1.4:12716049-12716068 | None:intergenic | 45.0% | |
| AGAGACAATGATTCTGGACG+AGG | - | chr1.4:12718595-12718614 | MS.gene32419:CDS | 45.0% | |
| ATCCCCACAACACATCTTTG+GGG | - | chr1.4:12714457-12714476 | MS.gene32419:CDS | 45.0% | |
| ATCTTCCGTACCTGTTGCAT+AGG | - | chr1.4:12713958-12713977 | MS.gene32419:CDS | 45.0% | |
| ATGCAACATAGGTCGATGTC+TGG | - | chr1.4:12714005-12714024 | MS.gene32419:intron | 45.0% | |
| ATGCTTTCGCATCCGATTGA+AGG | + | chr1.4:12715079-12715098 | None:intergenic | 45.0% | |
| CAACTCCTGTTGTCAACGTT+GGG | + | chr1.4:12714813-12714832 | None:intergenic | 45.0% | |
| CAATCCCCACAACACATCTT+TGG | - | chr1.4:12714455-12714474 | MS.gene32419:CDS | 45.0% | |
| CAATGGAGTGAACGAAGGAA+AGG | - | chr1.4:12717408-12717427 | MS.gene32419:intron | 45.0% | |
| CCCCGAGACTTATTCTTGAT+TGG | - | chr1.4:12718329-12718348 | MS.gene32419:intron | 45.0% | |
| CTATGGTGCACAAGTGAGAT+AGG | - | chr1.4:12714124-12714143 | MS.gene32419:intron | 45.0% | |
| CTGTTGGGACTTTCTTCCTT+TGG | - | chr1.4:12717691-12717710 | MS.gene32419:intron | 45.0% | |
| CTTCTTCGGTCAATATGCCA+AGG | - | chr1.4:12716132-12716151 | MS.gene32419:intron | 45.0% | |
| CTTGGCATATTGACCGAAGA+AGG | + | chr1.4:12716134-12716153 | None:intergenic | 45.0% | |
| GAAGAAGTGGAGTCCTTCTT+CGG | - | chr1.4:12716118-12716137 | MS.gene32419:intron | 45.0% | |
| GACATCGACCTATGTTGCAT+AGG | + | chr1.4:12714005-12714024 | None:intergenic | 45.0% | |
| GCAAGAGAAAAATGGGGTGA+AGG | - | chr1.4:12717453-12717472 | MS.gene32419:intron | 45.0% | |
| GCTACTCTAGATCCAGTTAC+CGG | - | chr1.4:12718097-12718116 | MS.gene32419:intron | 45.0% | |
| GTATACGGTACCTATGCAAC+AGG | + | chr1.4:12713971-12713990 | None:intergenic | 45.0% | |
| TACTAAGCCCGCTGATGTTA+AGG | - | chr1.4:12715116-12715135 | MS.gene32419:intron | 45.0% | |
| TCAACTCCTGTTGTCAACGT+TGG | + | chr1.4:12714814-12714833 | None:intergenic | 45.0% | |
| TGAAGCATGGCCTATGATTC+TGG | - | chr1.4:12716319-12716338 | MS.gene32419:intron | 45.0% | |
| ! | AAATCGAGTCACACCGACTA+AGG | + | chr1.4:12714400-12714419 | None:intergenic | 45.0% |
| ! | AGTTTGAGTTTCACTACCCC+CGG | + | chr1.4:12718502-12718521 | None:intergenic | 45.0% |
| ! | CACAATTTTACTGGTACCGC+CGG | + | chr1.4:12713720-12713739 | None:intergenic | 45.0% |
| ! | CTCAATTACCTCTTCTGGCT+TGG | + | chr1.4:12716044-12716063 | None:intergenic | 45.0% |
| ! | TAATCTCCGCTAAGGTGCTT+AGG | + | chr1.4:12714507-12714526 | None:intergenic | 45.0% |
| ! | TGTTTGTGTCGGTACTTCAC+AGG | - | chr1.4:12714786-12714805 | MS.gene32419:intron | 45.0% |
| ! | TTTTAAGCGGCTGACCTTGT+GGG | - | chr1.4:12714418-12714437 | MS.gene32419:CDS | 45.0% |
| !! | AGTTTGTTGGGATGCTCTGT+GGG | - | chr1.4:12714879-12714898 | MS.gene32419:CDS | 45.0% |
| !! | GATGCGAAAGCATCTTAAGC+TGG | - | chr1.4:12715086-12715105 | MS.gene32419:intron | 45.0% |
| !! | TAATACCTTTTCAGGGGAGG+AGG | - | chr1.4:12718538-12718557 | MS.gene32419:intron | 45.0% |
| !! | TAGTTTGTTGGGATGCTCTG+TGG | - | chr1.4:12714878-12714897 | MS.gene32419:CDS | 45.0% |
| !! | TTTTTAAGCGGCTGACCTTG+TGG | - | chr1.4:12714417-12714436 | MS.gene32419:CDS | 45.0% |
| !!! | CTATTTTTTGGGATCACCGG+GGG | - | chr1.4:12718483-12718502 | MS.gene32419:CDS | 45.0% |
| !! | ATATTATTATAATTTCTTAT+AGG | - | chr1.4:12716746-12716765 | MS.gene32419:intron | 5.0% |
| !!! | ATATATTTTTTTTTTTTTGA+AGG | + | chr1.4:12716178-12716197 | None:intergenic | 5.0% |
| !!! | ATTTTTAAAAAATTAAAGTT+TGG | + | chr1.4:12713932-12713951 | None:intergenic | 5.0% |
| !!! | TTTTTAAAAAATTAAAGTTT+GGG | + | chr1.4:12713931-12713950 | None:intergenic | 5.0% |
| AACGAAGGAAAGGAGGCTGA+AGG | - | chr1.4:12717418-12717437 | MS.gene32419:intron | 50.0% | |
| AAGTCCCAACAGCTGGAGAA+CGG | + | chr1.4:12717683-12717702 | None:intergenic | 50.0% | |
| AGCCAAGAAAACAATGGGGC+AGG | - | chr1.4:12717505-12717524 | MS.gene32419:intron | 50.0% | |
| AGGAAGAAAGTCCCAACAGC+TGG | + | chr1.4:12717690-12717709 | None:intergenic | 50.0% | |
| AGTTGAACATACGCCCTTGC+GGG | - | chr1.4:12714828-12714847 | MS.gene32419:CDS | 50.0% | |
| ATCTCTGTAAGTGGGGCCTT+TGG | + | chr1.4:12714917-12714936 | None:intergenic | 50.0% | |
| CCTCCCCAAAGATGTGTTGT+GGG | + | chr1.4:12714463-12714482 | None:intergenic | 50.0% | |
| CGGTACCTATGCAACAGGTA+CGG | + | chr1.4:12713966-12713985 | None:intergenic | 50.0% | |
| CTCCCCAAAGATGTGTTGTG+GGG | + | chr1.4:12714462-12714481 | None:intergenic | 50.0% | |
| GAAAACAATGGGGCAGGTGA+AGG | - | chr1.4:12717511-12717530 | MS.gene32419:intron | 50.0% | |
| GAGTTGAACATACGCCCTTG+CGG | - | chr1.4:12714827-12714846 | MS.gene32419:CDS | 50.0% | |
| GCATCATTACTCGGAGGCTA+AGG | + | chr1.4:12716264-12716283 | None:intergenic | 50.0% | |
| GCCAGAAGAGGTAATTGAGC+AGG | - | chr1.4:12716045-12716064 | MS.gene32419:intron | 50.0% | |
| GGTGAAGGAAAGGTGACTGA+AGG | - | chr1.4:12717526-12717545 | MS.gene32419:intron | 50.0% | |
| TAGCAACCGAGGAAGGTAAG+TGG | - | chr1.4:12718427-12718446 | MS.gene32419:intron | 50.0% | |
| TCCTCAGCAGCAACTTCAGA+GGG | + | chr1.4:12717343-12717362 | None:intergenic | 50.0% | |
| TGAACTTCCCAAGCCAGAAG+AGG | - | chr1.4:12716033-12716052 | MS.gene32419:intron | 50.0% | |
| TGCATTCCAGGGAGCAAAGT+TGG | - | chr1.4:12716001-12716020 | MS.gene32419:intron | 50.0% | |
| TGGAGTGAACGAAGGAAAGG+AGG | - | chr1.4:12717411-12717430 | MS.gene32419:intron | 50.0% | |
| TGTGTTATCCTCCTCGTGGT+TGG | + | chr1.4:12717127-12717146 | None:intergenic | 50.0% | |
| TTCCTCAGCAGCAACTTCAG+AGG | + | chr1.4:12717344-12717363 | None:intergenic | 50.0% | |
| TTTAAGCGGCTGACCTTGTG+GGG | - | chr1.4:12714419-12714438 | MS.gene32419:CDS | 50.0% | |
| TTTCCCGTTCTCCAGCTGTT+GGG | - | chr1.4:12717676-12717695 | MS.gene32419:intron | 50.0% | |
| ! | CACAAACATGTGTTGGCCAC+TGG | + | chr1.4:12714676-12714695 | None:intergenic | 50.0% |
| ! | CACAACACATCTTTGGGGAG+GGG | - | chr1.4:12714462-12714481 | MS.gene32419:CDS | 50.0% |
| ! | CACCTGCCCCATTGTTTTCT+TGG | + | chr1.4:12717510-12717529 | None:intergenic | 50.0% |
| ! | CCACAACACATCTTTGGGGA+GGG | - | chr1.4:12714461-12714480 | MS.gene32419:CDS | 50.0% |
| ! | GTTTGTTGGGATGCTCTGTG+GGG | - | chr1.4:12714880-12714899 | MS.gene32419:CDS | 50.0% |
| ! | TAAGCCCCCCTTTTCCGAAA+GGG | + | chr1.4:12718059-12718078 | None:intergenic | 50.0% |
| ! | TTAGGTGAGTTGGGTCCCTT+GGG | - | chr1.4:12714531-12714550 | MS.gene32419:CDS | 50.0% |
| ! | TTTAGGTGAGTTGGGTCCCT+TGG | - | chr1.4:12714530-12714549 | MS.gene32419:CDS | 50.0% |
| ! | TTTTCCCGTTCTCCAGCTGT+TGG | - | chr1.4:12717675-12717694 | MS.gene32419:intron | 50.0% |
| !! | GTGACTGAAGGTGCCGAAAA+GGG | - | chr1.4:12717538-12717557 | MS.gene32419:intron | 50.0% |
| AAGACTGTCTTACGCCCCAC+AGG | + | chr1.4:12716968-12716987 | None:intergenic | 55.0% | |
| AATAGCAGTCCTCCCCCACA+AGG | + | chr1.4:12714435-12714454 | None:intergenic | 55.0% | |
| ACCTTCCTCCTCCCCTGAAA+AGG | + | chr1.4:12718546-12718565 | None:intergenic | 55.0% | |
| AGTCCCAACAGCTGGAGAAC+GGG | + | chr1.4:12717682-12717701 | None:intergenic | 55.0% | |
| ATCCTGCCAACTTTGCTCCC+TGG | + | chr1.4:12716010-12716029 | None:intergenic | 55.0% | |
| CAATACTGGAGCCAGCTTCG+TGG | - | chr1.4:12718377-12718396 | MS.gene32419:intron | 55.0% | |
| CAATGGGGCAGGTGAAGGAA+AGG | - | chr1.4:12717516-12717535 | MS.gene32419:intron | 55.0% | |
| CAGGTCCCAACGTTGACAAC+AGG | - | chr1.4:12714805-12714824 | MS.gene32419:intron | 55.0% | |
| CCCTCCCCAAAGATGTGTTG+TGG | + | chr1.4:12714464-12714483 | None:intergenic | 55.0% | |
| CCGAAAAGGGCCAGGAAACT+GGG | - | chr1.4:12717551-12717570 | MS.gene32419:intron | 55.0% | |
| CGAGAAAAAGTGGAGTCCCG+CGG | + | chr1.4:12713775-12713794 | None:intergenic | 55.0% | |
| CGTGCTTTCTGAGCAGCTTC+AGG | + | chr1.4:12718025-12718044 | None:intergenic | 55.0% | |
| CTGCAGCCCTTTCGGAAAAG+GGG | - | chr1.4:12718050-12718069 | MS.gene32419:intron | 55.0% | |
| GAATGTGGGTTCCAACCACG+AGG | - | chr1.4:12717113-12717132 | MS.gene32419:intron | 55.0% | |
| GCTGCAGCCCTTTCGGAAAA+GGG | - | chr1.4:12718049-12718068 | MS.gene32419:intron | 55.0% | |
| GGAGGCTGAAGGCGAAGAAA+AGG | - | chr1.4:12717429-12717448 | MS.gene32419:intron | 55.0% | |
| GTTGAACATACGCCCTTGCG+GGG | - | chr1.4:12714829-12714848 | MS.gene32419:CDS | 55.0% | |
| TGCAGCCCTTTCGGAAAAGG+GGG | - | chr1.4:12718051-12718070 | MS.gene32419:intron | 55.0% | |
| TGCTGCAGCCCTTTCGGAAA+AGG | - | chr1.4:12718048-12718067 | MS.gene32419:intron | 55.0% | |
| TTAAGCGGCTGACCTTGTGG+GGG | - | chr1.4:12714420-12714439 | MS.gene32419:CDS | 55.0% | |
| TTCAGGGGAGGAGGAAGGTA+TGG | - | chr1.4:12718547-12718566 | MS.gene32419:intron | 55.0% | |
| TTCCAGGGAGCAAAGTTGGC+AGG | - | chr1.4:12716005-12716024 | MS.gene32419:intron | 55.0% | |
| ! | AAGTTGGCTCATACCCCGCA+AGG | + | chr1.4:12714845-12714864 | None:intergenic | 55.0% |
| ! | AGTTGGCTCATACCCCGCAA+GGG | + | chr1.4:12714844-12714863 | None:intergenic | 55.0% |
| ! | CCCACAACACATCTTTGGGG+AGG | - | chr1.4:12714460-12714479 | MS.gene32419:CDS | 55.0% |
| ! | CCCAGTTTCCTGGCCCTTTT+CGG | + | chr1.4:12717554-12717573 | None:intergenic | 55.0% |
| ! | CTAAGCCCCCCTTTTCCGAA+AGG | + | chr1.4:12718060-12718079 | None:intergenic | 55.0% |
| ! | CTGATCGAAAGCGTGTCCAG+TGG | - | chr1.4:12714657-12714676 | MS.gene32419:CDS | 55.0% |
| ! | GGAGGAAGGTATGGTAGAGG+AGG | - | chr1.4:12718556-12718575 | MS.gene32419:intron | 55.0% |
| ! | GGAGGAGGAAGGTATGGTAG+AGG | - | chr1.4:12718553-12718572 | MS.gene32419:intron | 55.0% |
| !! | ACCCTCTGAAGTTGCTGCTG+AGG | - | chr1.4:12717339-12717358 | MS.gene32419:intron | 55.0% |
| !! | ACCTTTTCAGGGGAGGAGGA+AGG | - | chr1.4:12718542-12718561 | MS.gene32419:intron | 55.0% |
| !! | CGGGCGCTGAGCTAGAATTA+AGG | - | chr1.4:12716638-12716657 | MS.gene32419:intron | 55.0% |
| !! | GGTGACTGAAGGTGCCGAAA+AGG | - | chr1.4:12717537-12717556 | MS.gene32419:intron | 55.0% |
| !! | TGCGTGCCACTTACCTTCCT+CGG | + | chr1.4:12718436-12718455 | None:intergenic | 55.0% |
| !! | TGTGAAGTACCGGTGGTACC+AGG | - | chr1.4:12713736-12713755 | MS.gene32419:intron | 55.0% |
| AGGCACGTACCTGGTACCAC+CGG | + | chr1.4:12713748-12713767 | None:intergenic | 60.0% | |
| CCTGACCCTAGTCAGCCCAA+GGG | + | chr1.4:12714549-12714568 | None:intergenic | 60.0% | |
| CCTTGGGCTGACTAGGGTCA+GGG | - | chr1.4:12714547-12714566 | MS.gene32419:CDS | 60.0% | |
| GCAGCCCTTTCGGAAAAGGG+GGG | - | chr1.4:12718052-12718071 | MS.gene32419:intron | 60.0% | |
| GCCGAAAAGGGCCAGGAAAC+TGG | - | chr1.4:12717550-12717569 | MS.gene32419:intron | 60.0% | |
| GTTCGGTTGCCCCGTCATGT+TGG | - | chr1.4:12716526-12716545 | MS.gene32419:intron | 60.0% | |
| TAGGGTCAGGGTAGGCCTCA+AGG | - | chr1.4:12714559-12714578 | MS.gene32419:CDS | 60.0% | |
| TCAGCGCTCTGTGAGCCTTG+AGG | + | chr1.4:12714577-12714596 | None:intergenic | 60.0% | |
| TGGGGCCACTGTGGTACCAA+AGG | - | chr1.4:12714898-12714917 | MS.gene32419:CDS | 60.0% | |
| TGGGGCCTTTGGTACCACAG+TGG | + | chr1.4:12714906-12714925 | None:intergenic | 60.0% | |
| TGGGTCCCTTGGGCTGACTA+GGG | - | chr1.4:12714541-12714560 | MS.gene32419:CDS | 60.0% | |
| TGTGGGTTCCAACCACGAGG+AGG | - | chr1.4:12717116-12717135 | MS.gene32419:intron | 60.0% | |
| TTGGGTCCCTTGGGCTGACT+AGG | - | chr1.4:12714540-12714559 | MS.gene32419:CDS | 60.0% | |
| ! | ACGTGCTGCTGCAGCCCTTT+CGG | - | chr1.4:12718042-12718061 | MS.gene32419:intron | 60.0% |
| !! | TGAAGGTGCCGAAAAGGGCC+AGG | - | chr1.4:12717543-12717562 | MS.gene32419:intron | 60.0% |
| AAGTGGAGTCCCGCGGTACC+AGG | + | chr1.4:12713768-12713787 | None:intergenic | 65.0% | |
| AGGTACGTGCCTGGTACCGC+GGG | - | chr1.4:12713756-12713775 | MS.gene32419:intron | 65.0% | |
| CAGGTACGTGCCTGGTACCG+CGG | - | chr1.4:12713755-12713774 | MS.gene32419:intron | 65.0% | |
| CCCTGACCCTAGTCAGCCCA+AGG | + | chr1.4:12714550-12714569 | None:intergenic | 65.0% | |
| CCCTTGGGCTGACTAGGGTC+AGG | - | chr1.4:12714546-12714565 | MS.gene32419:CDS | 65.0% | |
| GATGCTCTGTGGGGCCACTG+TGG | - | chr1.4:12714889-12714908 | MS.gene32419:CDS | 65.0% | |
| GGGCTGACTAGGGTCAGGGT+AGG | - | chr1.4:12714551-12714570 | MS.gene32419:CDS | 65.0% | |
| GGTGGTACCAGGTACGTGCC+TGG | - | chr1.4:12713747-12713766 | MS.gene32419:intron | 65.0% | |
| AGCGGCTGACCTTGTGGGGG+AGG | - | chr1.4:12714423-12714442 | MS.gene32419:CDS | 70.0% | |
| CGCGGTACCAGGCACGTACC+TGG | + | chr1.4:12713757-12713776 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 12713342 | 12718645 | 12713342 | ID=MS.gene32419 |
| chr1.4 | mRNA | 12713342 | 12718645 | 12713342 | ID=MS.gene32419.t1;Parent=MS.gene32419 |
| chr1.4 | exon | 12718595 | 12718645 | 12718595 | ID=MS.gene32419.t1.exon1;Parent=MS.gene32419.t1 |
| chr1.4 | CDS | 12718595 | 12718645 | 12718595 | ID=cds.MS.gene32419.t1;Parent=MS.gene32419.t1 |
| chr1.4 | exon | 12718431 | 12718509 | 12718431 | ID=MS.gene32419.t1.exon2;Parent=MS.gene32419.t1 |
| chr1.4 | CDS | 12718431 | 12718509 | 12718431 | ID=cds.MS.gene32419.t1;Parent=MS.gene32419.t1 |
| chr1.4 | exon | 12716783 | 12716935 | 12716783 | ID=MS.gene32419.t1.exon3;Parent=MS.gene32419.t1 |
| chr1.4 | CDS | 12716783 | 12716935 | 12716783 | ID=cds.MS.gene32419.t1;Parent=MS.gene32419.t1 |
| chr1.4 | exon | 12715834 | 12715976 | 12715834 | ID=MS.gene32419.t1.exon4;Parent=MS.gene32419.t1 |
| chr1.4 | CDS | 12715834 | 12715976 | 12715834 | ID=cds.MS.gene32419.t1;Parent=MS.gene32419.t1 |
| chr1.4 | exon | 12715322 | 12715470 | 12715322 | ID=MS.gene32419.t1.exon5;Parent=MS.gene32419.t1 |
| chr1.4 | CDS | 12715322 | 12715470 | 12715322 | ID=cds.MS.gene32419.t1;Parent=MS.gene32419.t1 |
| chr1.4 | exon | 12714827 | 12714931 | 12714827 | ID=MS.gene32419.t1.exon6;Parent=MS.gene32419.t1 |
| chr1.4 | CDS | 12714827 | 12714931 | 12714827 | ID=cds.MS.gene32419.t1;Parent=MS.gene32419.t1 |
| chr1.4 | exon | 12714324 | 12714744 | 12714324 | ID=MS.gene32419.t1.exon7;Parent=MS.gene32419.t1 |
| chr1.4 | CDS | 12714324 | 12714744 | 12714324 | ID=cds.MS.gene32419.t1;Parent=MS.gene32419.t1 |
| chr1.4 | exon | 12713869 | 12714016 | 12713869 | ID=MS.gene32419.t1.exon8;Parent=MS.gene32419.t1 |
| chr1.4 | CDS | 12713869 | 12714016 | 12713869 | ID=cds.MS.gene32419.t1;Parent=MS.gene32419.t1 |
| chr1.4 | exon | 12713546 | 12713624 | 12713546 | ID=MS.gene32419.t1.exon9;Parent=MS.gene32419.t1 |
| chr1.4 | CDS | 12713546 | 12713624 | 12713546 | ID=cds.MS.gene32419.t1;Parent=MS.gene32419.t1 |
| chr1.4 | exon | 12713342 | 12713435 | 12713342 | ID=MS.gene32419.t1.exon10;Parent=MS.gene32419.t1 |
| chr1.4 | CDS | 12713342 | 12713435 | 12713342 | ID=cds.MS.gene32419.t1;Parent=MS.gene32419.t1 |
| Gene Sequence |
| Protein sequence |
