Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63795.t1 | XP_003617620.1 | 95.9 | 464 | 11 | 1 | 4 | 459 | 2 | 465 | 1.70E-248 | 868.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63795.t1 | Q9ZNW0 | 68.6 | 465 | 138 | 3 | 1 | 459 | 2 | 464 | 1.3e-180 | 634.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63795.t1 | G7K8M6 | 95.9 | 464 | 11 | 1 | 4 | 459 | 2 | 465 | 1.2e-248 | 868.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene070760 | MS.gene63795 | PPI |
| MS.gene43604 | MS.gene63795 | PPI |
| MS.gene63795 | MS.gene045436 | PPI |
| MS.gene05792 | MS.gene63795 | PPI |
| MS.gene006731 | MS.gene63795 | PPI |
| MS.gene00146 | MS.gene63795 | PPI |
| MS.gene63795 | MS.gene029211 | PPI |
| MS.gene55980 | MS.gene63795 | PPI |
| MS.gene67725 | MS.gene63795 | PPI |
| MS.gene002676 | MS.gene63795 | PPI |
| MS.gene86222 | MS.gene63795 | PPI |
| MS.gene63795 | MS.gene027729 | PPI |
| MS.gene63795 | MS.gene54070 | PPI |
| MS.gene44289 | MS.gene63795 | PPI |
| MS.gene05791 | MS.gene63795 | PPI |
| MS.gene43614 | MS.gene63795 | PPI |
| MS.gene070758 | MS.gene63795 | PPI |
| MS.gene021573 | MS.gene63795 | PPI |
| MS.gene002675 | MS.gene63795 | PPI |
| MS.gene65650 | MS.gene63795 | PPI |
| MS.gene29165 | MS.gene63795 | PPI |
| MS.gene86296 | MS.gene63795 | PPI |
| MS.gene63795 | MS.gene015893 | PPI |
| MS.gene63795 | MS.gene058245 | PPI |
| MS.gene93131 | MS.gene63795 | PPI |
| MS.gene63795 | MS.gene037362 | PPI |
| MS.gene070761 | MS.gene63795 | PPI |
| MS.gene004357 | MS.gene63795 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63795.t1 | MTR_5g093580 | 95.905 | 464 | 11 | 1 | 4 | 459 | 2 | 465 | 0.0 | 909 |
| MS.gene63795.t1 | MTR_8g037355 | 28.105 | 153 | 108 | 2 | 85 | 236 | 9 | 160 | 6.81e-20 | 92.8 |
| MS.gene63795.t1 | MTR_4g131690 | 28.796 | 191 | 119 | 5 | 68 | 242 | 28 | 217 | 5.83e-15 | 77.0 |
| MS.gene63795.t1 | MTR_5g072480 | 28.824 | 170 | 106 | 5 | 53 | 209 | 559 | 726 | 5.09e-12 | 68.9 |
| MS.gene63795.t1 | MTR_5g072480 | 28.824 | 170 | 106 | 5 | 53 | 209 | 558 | 725 | 5.13e-12 | 68.9 |
| MS.gene63795.t1 | MTR_5g072480 | 28.824 | 170 | 106 | 5 | 53 | 209 | 375 | 542 | 5.32e-12 | 68.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63795.t1 | AT5G55130 | 68.602 | 465 | 138 | 3 | 1 | 459 | 2 | 464 | 0.0 | 667 |
| MS.gene63795.t1 | AT5G55130 | 63.871 | 465 | 133 | 4 | 1 | 459 | 2 | 437 | 0.0 | 606 |
| MS.gene63795.t1 | AT5G55130 | 71.709 | 357 | 99 | 1 | 103 | 459 | 6 | 360 | 0.0 | 550 |
| MS.gene63795.t1 | AT2G21470 | 28.049 | 164 | 116 | 2 | 77 | 238 | 5 | 168 | 1.93e-19 | 91.7 |
| MS.gene63795.t1 | AT2G21470 | 28.049 | 164 | 116 | 2 | 77 | 238 | 5 | 168 | 2.24e-19 | 91.3 |
| MS.gene63795.t1 | AT2G21470 | 28.049 | 164 | 116 | 2 | 77 | 238 | 5 | 168 | 2.46e-19 | 91.3 |
| MS.gene63795.t1 | AT5G19180 | 29.586 | 169 | 105 | 3 | 87 | 242 | 49 | 216 | 4.92e-15 | 77.4 |
| MS.gene63795.t1 | AT5G19180 | 29.586 | 169 | 105 | 3 | 87 | 242 | 49 | 216 | 5.81e-15 | 77.0 |
| MS.gene63795.t1 | AT5G06460 | 31.613 | 155 | 95 | 4 | 64 | 209 | 471 | 623 | 1.11e-14 | 77.4 |
| MS.gene63795.t1 | AT2G30110 | 28.824 | 170 | 109 | 5 | 49 | 209 | 460 | 626 | 1.27e-11 | 67.8 |
Find 107 sgRNAs with CRISPR-Local
Find 289 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATGGAATGTTCAAGGAATT+TGG | 0.178410 | 5.3:+75255044 | None:intergenic |
| TTCAAAATTGATGATATTTC+CGG | 0.185058 | 5.3:+75254999 | None:intergenic |
| TGTTCAATACCTTCACAAAA+TGG | 0.206041 | 5.3:-75254886 | MS.gene63795:CDS |
| GAACCATTGGAAGCGTGTTT+TGG | 0.256324 | 5.3:+75259350 | None:intergenic |
| CACCTTGTTCTTCCTTCCTT+TGG | 0.271336 | 5.3:-75259269 | MS.gene63795:CDS |
| CTTCCTTCCTTTGGTGTTCA+AGG | 0.288793 | 5.3:-75259260 | MS.gene63795:intron |
| GCAGCAGCGGATTTCACTTT+TGG | 0.291766 | 5.3:+75257552 | None:intergenic |
| CTTCTGCTAAGGATATTGTT+GGG | 0.314527 | 5.3:-75254857 | MS.gene63795:CDS |
| CACATGCAGCCCCTCGTATC+AGG | 0.323829 | 5.3:-75256464 | MS.gene63795:intron |
| ATCAATGTCTTCTTCTTCTT+CGG | 0.331405 | 5.3:-75259474 | None:intergenic |
| ATGCATTGTCTGCACGAATC+CGG | 0.339347 | 5.3:-75256028 | MS.gene63795:CDS |
| AAAGATGAAGAAGAGGAAAA+AGG | 0.342101 | 5.3:-75254975 | MS.gene63795:CDS |
| AGCTTTAGAGTCTAGGTTGC+CGG | 0.361157 | 5.3:-75255018 | MS.gene63795:CDS |
| AGCTAATAAGTGGGGAAGTT+AGG | 0.374352 | 5.3:+75254804 | None:intergenic |
| GTTGTGGGAGCCGGAGGATT+GGG | 0.376200 | 5.3:-75257980 | MS.gene63795:CDS |
| CAACTTTGGCATGCTGATCT+AGG | 0.393182 | 5.3:+75256266 | None:intergenic |
| ACTTCTGCTAAGGATATTGT+TGG | 0.395111 | 5.3:-75254858 | MS.gene63795:CDS |
| CATTCTCAGCTTTAGAGTCT+AGG | 0.402083 | 5.3:-75255025 | MS.gene63795:CDS |
| TGAGGTTCCAATCCATTTGT+AGG | 0.411651 | 5.3:+75259314 | None:intergenic |
| TCTGCGAACTTCCAATGCTT+TGG | 0.419925 | 5.3:-75257370 | MS.gene63795:CDS |
| CTCCATTGTCGGCGCAACTT+TGG | 0.419959 | 5.3:+75256252 | None:intergenic |
| GTTCAATACCTTCACAAAAT+GGG | 0.422324 | 5.3:-75254885 | MS.gene63795:CDS |
| ATCAGGTGCCGCTGTGGGAT+TGG | 0.423811 | 5.3:-75256447 | MS.gene63795:CDS |
| TGGCTGACCAATATATGCTT+CGG | 0.428030 | 5.3:+75257572 | None:intergenic |
| TCTTCACCATACCCTACAAA+TGG | 0.428964 | 5.3:-75259326 | MS.gene63795:CDS |
| TCTTAATTGCCTCGAGAGCT+TGG | 0.429943 | 5.3:+75256099 | None:intergenic |
| TCCAATCCATTTGTAGGGTA+TGG | 0.437064 | 5.3:+75259320 | None:intergenic |
| CTCGTATCAGGTGCCGCTGT+GGG | 0.438837 | 5.3:-75256452 | MS.gene63795:CDS |
| ACTTCTCATAATCAAATTCT+CGG | 0.443462 | 5.3:+75255720 | None:intergenic |
| TACTCCTAGTACTCCATTGT+CGG | 0.447816 | 5.3:+75256241 | None:intergenic |
| CGCGCGACAAGCAGCAGCAG+CGG | 0.448558 | 5.3:+75257539 | None:intergenic |
| TTCTGCTAAGGATATTGTTG+GGG | 0.451171 | 5.3:-75254856 | MS.gene63795:CDS |
| AGCTGAGAATGGAATGTTCA+AGG | 0.453312 | 5.3:+75255037 | None:intergenic |
| CACAGCGGCACCTGATACGA+GGG | 0.453639 | 5.3:+75256454 | None:intergenic |
| AGTTGTGGGAGCCGGAGGAT+TGG | 0.454012 | 5.3:-75257981 | MS.gene63795:CDS |
| TTTGAAGAAAGATGAAGAAG+AGG | 0.456679 | 5.3:-75254982 | MS.gene63795:CDS |
| GCTGAAAATTTCCAAAGCAT+TGG | 0.457701 | 5.3:+75257359 | None:intergenic |
| ATACACACCGAAGCATATAT+TGG | 0.458303 | 5.3:-75257579 | MS.gene63795:CDS |
| CTAGACTCTAAAGCTGAGAA+TGG | 0.462514 | 5.3:+75255026 | None:intergenic |
| CGCTGTGGGATTGGAAGGAC+AGG | 0.476028 | 5.3:-75256438 | MS.gene63795:intron |
| AGCAGGAGCACCCAATCCTC+CGG | 0.476202 | 5.3:+75257970 | None:intergenic |
| ACCATACCCTACAAATGGAT+TGG | 0.482774 | 5.3:-75259321 | MS.gene63795:CDS |
| TCCACAAGCTTCACAATGCA+TGG | 0.490862 | 5.3:+75255772 | None:intergenic |
| AGTGACTGCTGTGTGGTACT+AGG | 0.499373 | 5.3:-75257142 | MS.gene63795:CDS |
| GAAGTGACACAATCTTGAAA+TGG | 0.504910 | 5.3:+75255066 | None:intergenic |
| ATCAAAGAGAAGCATCCTTC+CGG | 0.504956 | 5.3:+75256049 | None:intergenic |
| ATCTACTTCCTAGTGAATCA+AGG | 0.509284 | 5.3:-75255163 | MS.gene63795:CDS |
| AGCAGTCACTGATCAGATAC+CGG | 0.509321 | 5.3:+75257155 | None:intergenic |
| TGCATTGTCTGCACGAATCC+GGG | 0.512742 | 5.3:-75256027 | MS.gene63795:CDS |
| TGCGCCGACAATGGAGTACT+AGG | 0.517421 | 5.3:-75256245 | MS.gene63795:CDS |
| GCAGTTGGTGAACCACTCTC+CGG | 0.522319 | 5.3:-75256068 | MS.gene63795:CDS |
| CCTCGTATCAGGTGCCGCTG+TGG | 0.524945 | 5.3:-75256453 | MS.gene63795:CDS |
| TTAACTACATAGCTAATAAG+TGG | 0.527371 | 5.3:+75254794 | None:intergenic |
| TAACTACATAGCTAATAAGT+GGG | 0.535080 | 5.3:+75254795 | None:intergenic |
| GCTCAGTAATATGCATAGAC+AGG | 0.540369 | 5.3:-75257806 | MS.gene63795:intron |
| GTATGGTGAAGAAGAACCAT+TGG | 0.541425 | 5.3:+75259337 | None:intergenic |
| GCTGCAAAATATAACAAAGC+AGG | 0.542406 | 5.3:+75257953 | None:intergenic |
| TGCCAAAGTTGCGCCGACAA+TGG | 0.544188 | 5.3:-75256254 | MS.gene63795:CDS |
| GAGGTTCCAATCCATTTGTA+GGG | 0.546528 | 5.3:+75259315 | None:intergenic |
| CTGCTGATCCTTGATTCACT+AGG | 0.546650 | 5.3:+75255155 | None:intergenic |
| TGCTAGATACGATATAATAG+TGG | 0.549564 | 5.3:-75257200 | MS.gene63795:intron |
| GGTGCCGCTGTGGGATTGGA+AGG | 0.551198 | 5.3:-75256443 | MS.gene63795:CDS |
| GGAAAGAGGCATCGATAGCA+AGG | 0.553750 | 5.3:+75256299 | None:intergenic |
| GGAAGTAGATTTAACTTCAA+CGG | 0.555004 | 5.3:+75255176 | None:intergenic |
| TGGCATGCTGATCTAGGTGG+TGG | 0.557957 | 5.3:+75256272 | None:intergenic |
| GCTGATCTAGGTGGTGGAGT+AGG | 0.558383 | 5.3:+75256278 | None:intergenic |
| AGAAATCATACCACATGCAA+GGG | 0.561762 | 5.3:+75255686 | None:intergenic |
| ACAATCTTGAAATGGTGAGC+TGG | 0.563760 | 5.3:+75255074 | None:intergenic |
| ATTAAGATTGCTGCTGCAGT+TGG | 0.563978 | 5.3:-75256083 | MS.gene63795:CDS |
| TTATATGTAGTATGCAGAAG+AGG | 0.574557 | 5.3:-75254927 | MS.gene63795:CDS |
| AGAAGCATCCTTCCGGAGAG+TGG | 0.575307 | 5.3:+75256056 | None:intergenic |
| AAGAAATCATACCACATGCA+AGG | 0.576332 | 5.3:+75255685 | None:intergenic |
| CTCCCAAAACACGCTTCCAA+TGG | 0.581859 | 5.3:-75259353 | MS.gene63795:CDS |
| CAACTCATCTGTTGAAGTCG+TGG | 0.586544 | 5.3:-75257406 | MS.gene63795:CDS |
| TCTGCTAAGGATATTGTTGG+GGG | 0.593899 | 5.3:-75254855 | MS.gene63795:CDS |
| CAAAGAAATAACTCTAAACA+AGG | 0.594530 | 5.3:-75255123 | MS.gene63795:CDS |
| CCACAGCGGCACCTGATACG+AGG | 0.596934 | 5.3:+75256453 | None:intergenic |
| CTGCTGTGTGGTACTAGGAA+AGG | 0.597449 | 5.3:-75257137 | MS.gene63795:intron |
| TGGCTGTCTCCAAGCTCTCG+AGG | 0.604810 | 5.3:-75256108 | MS.gene63795:CDS |
| CACTCAGACTCCCTTGCATG+TGG | 0.607922 | 5.3:-75255696 | MS.gene63795:intron |
| AGTAGATTTAACTTCAACGG+AGG | 0.608635 | 5.3:+75255179 | None:intergenic |
| TAGGTGGTGGAGTAGGAAAG+AGG | 0.608776 | 5.3:+75256285 | None:intergenic |
| TGTAGTACCTTGAACACCAA+AGG | 0.613859 | 5.3:+75259253 | None:intergenic |
| CAACAGATAATGCTCCCACC+CGG | 0.617846 | 5.3:-75257174 | MS.gene63795:CDS |
| CTTTGGCATGCTGATCTAGG+TGG | 0.619951 | 5.3:+75256269 | None:intergenic |
| TGAATCAAGGATCAGCAGCA+TGG | 0.619978 | 5.3:-75255150 | MS.gene63795:CDS |
| ATTGCACAGGTGAAAATCAG+AGG | 0.628081 | 5.3:-75255800 | MS.gene63795:intron |
| CACAGGTGAAAATCAGAGGA+AGG | 0.629739 | 5.3:-75255796 | MS.gene63795:intron |
| GTACCTTGAACACCAAAGGA+AGG | 0.633624 | 5.3:+75259257 | None:intergenic |
| TGGAGACAGCCAATTATACC+AGG | 0.633796 | 5.3:+75256119 | None:intergenic |
| GCAGTCACTGATCAGATACC+GGG | 0.637102 | 5.3:+75257156 | None:intergenic |
| TTGGTGAACCACTCTCCGGA+AGG | 0.643162 | 5.3:-75256064 | MS.gene63795:CDS |
| CTAACATCAACAAGCACATG+TGG | 0.644157 | 5.3:+75255098 | None:intergenic |
| CACCAAAGGAAGGAAGAACA+AGG | 0.647871 | 5.3:+75259267 | None:intergenic |
| GTCACTGATCAGATACCGGG+TGG | 0.650418 | 5.3:+75257159 | None:intergenic |
| TCTGATCAGTGACTGCTGTG+TGG | 0.668305 | 5.3:-75257149 | MS.gene63795:CDS |
| GACAATGGAGTACTAGGAGT+AGG | 0.670068 | 5.3:-75256239 | MS.gene63795:intron |
| ACAGCGGCACCTGATACGAG+GGG | 0.670870 | 5.3:+75256455 | None:intergenic |
| AACTACATAGCTAATAAGTG+GGG | 0.673584 | 5.3:+75254796 | None:intergenic |
| TCCATGCATTGTGAAGCTTG+TGG | 0.684097 | 5.3:-75255773 | MS.gene63795:CDS |
| CTGTATCTATGAATCATGTG+AGG | 0.684552 | 5.3:+75259296 | None:intergenic |
| GGGTATTGTTGATCATGACA+AGG | 0.685293 | 5.3:-75257833 | MS.gene63795:CDS |
| TCACTGATCAGATACCGGGT+GGG | 0.695189 | 5.3:+75257160 | None:intergenic |
| CTCACTATCTACAATCACAA+CGG | 0.713508 | 5.3:-75256326 | MS.gene63795:CDS |
| ACTATCTACAATCACAACGG+TGG | 0.719133 | 5.3:-75256323 | MS.gene63795:CDS |
| CAAAGGAAGGAAGAACAAGG+TGG | 0.719190 | 5.3:+75259270 | None:intergenic |
| CTGTCCTTCCAATCCCACAG+CGG | 0.786992 | 5.3:+75256439 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATACTATTGAAATTAATAA+AGG | + | chr5.3:75257465-75257484 | None:intergenic | 10.0% |
| !!! | TTTGTTACTATATTATTTTA+GGG | - | chr5.3:75257230-75257249 | MS.gene63795:intron | 10.0% |
| !!! | TTTTTATTCATATTTAATTC+TGG | + | chr5.3:75257605-75257624 | None:intergenic | 10.0% |
| !!! | TTTTTTAACTTATTTCTATA+AGG | + | chr5.3:75256097-75256116 | None:intergenic | 10.0% |
| !! | AATTAGAATTAGAATTAGTT+TGG | - | chr5.3:75255137-75255156 | MS.gene63795:CDS | 15.0% |
| !! | AGAATTAAATAAATAAACAG+TGG | - | chr5.3:75255665-75255684 | MS.gene63795:intron | 15.0% |
| !! | CTAAAATAATATAGTAACAA+AGG | + | chr5.3:75257231-75257250 | None:intergenic | 15.0% |
| !! | CTTATATAATATATTAGCTA+AGG | - | chr5.3:75258440-75258459 | MS.gene63795:intron | 15.0% |
| !! | TTAAAATACACTTACAAAAT+GGG | - | chr5.3:75258950-75258969 | MS.gene63795:intron | 15.0% |
| !!! | ATAAGTTAGTTTTTGTATTT+AGG | - | chr5.3:75258663-75258682 | MS.gene63795:intron | 15.0% |
| !!! | ATTAGAATTAGAATTAGTTT+GGG | - | chr5.3:75255138-75255157 | MS.gene63795:CDS | 15.0% |
| !!! | CTTTGTTACTATATTATTTT+AGG | - | chr5.3:75257229-75257248 | MS.gene63795:intron | 15.0% |
| !!! | TAAGTTTTTGTGAATATTTA+GGG | - | chr5.3:75256846-75256865 | MS.gene63795:intron | 15.0% |
| !!! | TTATATTTTGTTTATTTCCA+TGG | - | chr5.3:75256234-75256253 | MS.gene63795:intron | 15.0% |
| !!! | TTTAAAATACACTTACAAAA+TGG | - | chr5.3:75258949-75258968 | MS.gene63795:intron | 15.0% |
| !!! | TTTCAAAATTAGTAAGTTTT+GGG | + | chr5.3:75258833-75258852 | None:intergenic | 15.0% |
| !!! | TTTTCAAAATTAGTAAGTTT+TGG | + | chr5.3:75258834-75258853 | None:intergenic | 15.0% |
| !! | AAATAAGCTAAAAATATGGT+TGG | + | chr5.3:75257709-75257728 | None:intergenic | 20.0% |
| !! | AATAAGCTAAAAATATGGTT+GGG | + | chr5.3:75257708-75257727 | None:intergenic | 20.0% |
| !! | ATCTCGATTAATTTAGAAAA+AGG | - | chr5.3:75257303-75257322 | MS.gene63795:intron | 20.0% |
| !! | ATTATATAATCTTATTGCAC+AGG | - | chr5.3:75258463-75258482 | MS.gene63795:intron | 20.0% |
| !! | GACAAAATAAGCTAAAAATA+TGG | + | chr5.3:75257713-75257732 | None:intergenic | 20.0% |
| !! | GATATAATCAAAGACATAAA+GGG | + | chr5.3:75257889-75257908 | None:intergenic | 20.0% |
| !! | TAAAATAATGATCATAAGCA+AGG | + | chr5.3:75258297-75258316 | None:intergenic | 20.0% |
| !! | TAACTTATAATATTTGTGTC+CGG | + | chr5.3:75258651-75258670 | None:intergenic | 20.0% |
| !! | TAGAATTCTAATGATAGAAA+TGG | - | chr5.3:75258347-75258366 | MS.gene63795:intron | 20.0% |
| !! | TAGTAATAATATTCGAGAAA+AGG | - | chr5.3:75258855-75258874 | MS.gene63795:intron | 20.0% |
| !! | TCATTCTATAATATAGTGTT+GGG | - | chr5.3:75255907-75255926 | MS.gene63795:intron | 20.0% |
| !! | TCTCGATTAATTTAGAAAAA+GGG | - | chr5.3:75257304-75257323 | MS.gene63795:intron | 20.0% |
| !! | TGATATAATCAAAGACATAA+AGG | + | chr5.3:75257890-75257909 | None:intergenic | 20.0% |
| !! | TTCAAAAAGTCAAATGTATT+TGG | + | chr5.3:75257651-75257670 | None:intergenic | 20.0% |
| !! | TTGAAAATGTTAGATATAGT+TGG | - | chr5.3:75255109-75255128 | MS.gene63795:CDS | 20.0% |
| !! | TTTAACAAGATTATAGAACA+AGG | + | chr5.3:75256391-75256410 | None:intergenic | 20.0% |
| !!! | AACCTTTAGAATATAGTAAT+CGG | - | chr5.3:75256204-75256223 | MS.gene63795:intron | 20.0% |
| !!! | AATAAGTTATGTTTTCAAAC+AGG | - | chr5.3:75255352-75255371 | MS.gene63795:intron | 20.0% |
| !!! | AATATGATGAGTTTTTTCAT+TGG | - | chr5.3:75258983-75259002 | MS.gene63795:intron | 20.0% |
| !!! | AGATCCAAAAAATGAAATTT+TGG | - | chr5.3:75257624-75257643 | MS.gene63795:intron | 20.0% |
| !!! | ATAAGTTATGTTTTCAAACA+GGG | - | chr5.3:75255353-75255372 | MS.gene63795:intron | 20.0% |
| !!! | CAGTGATTAAAGTTTTATTT+TGG | - | chr5.3:75258731-75258750 | MS.gene63795:intron | 20.0% |
| !!! | CTAAGTTTTTGTGAATATTT+AGG | - | chr5.3:75256845-75256864 | MS.gene63795:intron | 20.0% |
| !!! | GATTATATCACATTATTTTG+AGG | - | chr5.3:75257900-75257919 | MS.gene63795:intron | 20.0% |
| !!! | TACATTTTAAAAAATTGCAC+AGG | - | chr5.3:75256414-75256433 | MS.gene63795:intron | 20.0% |
| !!! | TGATATTTTTTGTTCGATTT+TGG | + | chr5.3:75254873-75254892 | None:intergenic | 20.0% |
| !!! | TTAGAATTAGAATTAGTTTG+GGG | - | chr5.3:75255139-75255158 | MS.gene63795:CDS | 20.0% |
| !!! | TTCAAAATTGATGATATTTC+CGG | + | chr5.3:75259280-75259299 | None:intergenic | 20.0% |
| ! | AAAAAATTGCACAGGTAAAT+TGG | - | chr5.3:75256422-75256441 | MS.gene63795:intron | 25.0% |
| ! | AAAAATTGCACAGGTAAATT+GGG | - | chr5.3:75256423-75256442 | MS.gene63795:intron | 25.0% |
| ! | AACCGATTACTATATTCTAA+AGG | + | chr5.3:75256209-75256228 | None:intergenic | 25.0% |
| ! | AATATTTAGATTTCTGAGCT+AGG | - | chr5.3:75257407-75257426 | MS.gene63795:CDS | 25.0% |
| ! | ACTTCTCATAATCAAATTCT+CGG | + | chr5.3:75258559-75258578 | None:intergenic | 25.0% |
| ! | AGGTTAGATAATAATACACT+TGG | + | chr5.3:75258780-75258799 | None:intergenic | 25.0% |
| ! | ATAAGATCAAAGTTACAAAC+AGG | + | chr5.3:75256644-75256663 | None:intergenic | 25.0% |
| ! | ATAAGCTAAAAATATGGTTG+GGG | + | chr5.3:75257707-75257726 | None:intergenic | 25.0% |
| ! | ATATATAATGACACAGATGA+AGG | - | chr5.3:75257369-75257388 | MS.gene63795:CDS | 25.0% |
| ! | CAAAGAAATAACTCTAAACA+AGG | - | chr5.3:75259153-75259172 | MS.gene63795:intron | 25.0% |
| ! | CTCATTCTATAATATAGTGT+TGG | - | chr5.3:75255906-75255925 | MS.gene63795:intron | 25.0% |
| ! | GGTTAGATAATAATACACTT+GGG | + | chr5.3:75258779-75258798 | None:intergenic | 25.0% |
| ! | TGATAAGAAAAGAAATCACA+CGG | + | chr5.3:75257048-75257067 | None:intergenic | 25.0% |
| ! | TTATACACTTTACTAATTGC+CGG | - | chr5.3:75258629-75258648 | MS.gene63795:intron | 25.0% |
| ! | TTTCCTATCTTCAATATGAT+CGG | - | chr5.3:75256947-75256966 | MS.gene63795:intron | 25.0% |
| !! | AAAATTGCACAAGGATTTTA+GGG | + | chr5.3:75257515-75257534 | None:intergenic | 25.0% |
| !! | ATATAAGCACTTTTCATGAT+AGG | - | chr5.3:75255309-75255328 | MS.gene63795:intron | 25.0% |
| !! | TAGAATTAGAATTAGTTTGG+GGG | - | chr5.3:75255140-75255159 | MS.gene63795:CDS | 25.0% |
| !!! | AGTTTTATTTGCTAAACTTG+TGG | - | chr5.3:75256496-75256515 | MS.gene63795:intron | 25.0% |
| !!! | ATGATCATTATTTTACGCAT+TGG | - | chr5.3:75258302-75258321 | MS.gene63795:intron | 25.0% |
| !!! | ATTTTAGTTCCTGGTATAAT+TGG | - | chr5.3:75258148-75258167 | MS.gene63795:intron | 25.0% |
| !!! | CATAAATTAGTTTTACACTG+TGG | - | chr5.3:75258893-75258912 | MS.gene63795:intron | 25.0% |
| !!! | TGGTCCAAAATTTCATTTTT+TGG | + | chr5.3:75257631-75257650 | None:intergenic | 25.0% |
| AAAGATGAAGAAGAGGAAAA+AGG | - | chr5.3:75259301-75259320 | MS.gene63795:CDS | 30.0% | |
| AACTTTAATCACTGATGAGT+TGG | + | chr5.3:75258725-75258744 | None:intergenic | 30.0% | |
| AATGGAATGTTCAAGGAATT+TGG | + | chr5.3:75259235-75259254 | None:intergenic | 30.0% | |
| AGACTATTTGGAAGAGATTA+TGG | + | chr5.3:75256147-75256166 | None:intergenic | 30.0% | |
| AGCAATGTAGTTATAAATGG+AGG | + | chr5.3:75255722-75255741 | None:intergenic | 30.0% | |
| ATCTCATCTACAATTCATGT+CGG | - | chr5.3:75256776-75256795 | MS.gene63795:intron | 30.0% | |
| ATGTAGACAGCATGATTTAT+AGG | - | chr5.3:75257737-75257756 | MS.gene63795:intron | 30.0% | |
| ATTCAGCGGTAATATTCAAA+AGG | + | chr5.3:75257025-75257044 | None:intergenic | 30.0% | |
| CACAGCAATGTAGTTATAAA+TGG | + | chr5.3:75255725-75255744 | None:intergenic | 30.0% | |
| CAGTAAAGATCAAAGAAAAC+AGG | + | chr5.3:75256992-75257011 | None:intergenic | 30.0% | |
| GAAGTTATTAACATACAACC+CGG | + | chr5.3:75258270-75258289 | None:intergenic | 30.0% | |
| GTAACATAATTCGTGTACTT+TGG | - | chr5.3:75255496-75255515 | MS.gene63795:intron | 30.0% | |
| GTTCAATACCTTCACAAAAT+GGG | - | chr5.3:75259391-75259410 | MS.gene63795:CDS | 30.0% | |
| GTTCTCTCAAAATTTATGTC+AGG | + | chr5.3:75255234-75255253 | None:intergenic | 30.0% | |
| TAAACACTAGTGAGACTATT+TGG | + | chr5.3:75256159-75256178 | None:intergenic | 30.0% | |
| TACACTACACATGAAGAATT+CGG | + | chr5.3:75255998-75256017 | None:intergenic | 30.0% | |
| TGCTAGATACGATATAATAG+TGG | - | chr5.3:75257076-75257095 | MS.gene63795:intron | 30.0% | |
| TGTTCAATACCTTCACAAAA+TGG | - | chr5.3:75259390-75259409 | MS.gene63795:CDS | 30.0% | |
| TTATATGTAGTATGCAGAAG+AGG | - | chr5.3:75259349-75259368 | MS.gene63795:CDS | 30.0% | |
| TTCAGCGGTAATATTCAAAA+GGG | + | chr5.3:75257024-75257043 | None:intergenic | 30.0% | |
| TTTGAAGAAAGATGAAGAAG+AGG | - | chr5.3:75259294-75259313 | MS.gene63795:CDS | 30.0% | |
| ! | AAATTGCACAAGGATTTTAG+GGG | + | chr5.3:75257514-75257533 | None:intergenic | 30.0% |
| ! | AAGTAAAACCCATTTTGTGA+AGG | + | chr5.3:75259402-75259421 | None:intergenic | 30.0% |
| ! | GAAAATTGCACAAGGATTTT+AGG | + | chr5.3:75257516-75257535 | None:intergenic | 30.0% |
| ! | GGAAGTAGATTTAACTTCAA+CGG | + | chr5.3:75259103-75259122 | None:intergenic | 30.0% |
| ! | TAAGGGTTAACTAAGTTGAA+GGG | - | chr5.3:75255188-75255207 | MS.gene63795:intron | 30.0% |
| ! | TATTTGCTAAACTTGTGGTA+TGG | - | chr5.3:75256501-75256520 | MS.gene63795:intron | 30.0% |
| ! | TCTCTCAAATCTTTTGATGT+GGG | - | chr5.3:75255811-75255830 | MS.gene63795:intron | 30.0% |
| ! | TTAACTAAGTTGAAGGGTTA+GGG | - | chr5.3:75255194-75255213 | MS.gene63795:intron | 30.0% |
| ! | TTCTCTCAAATCTTTTGATG+TGG | - | chr5.3:75255810-75255829 | MS.gene63795:intron | 30.0% |
| ! | TTGTTATATTTTGCAGCTTC+TGG | - | chr5.3:75256329-75256348 | MS.gene63795:CDS | 30.0% |
| !!! | AAGTCGTCAATTTTAGTTGT+GGG | - | chr5.3:75256281-75256300 | MS.gene63795:CDS | 30.0% |
| !!! | ATTATTTTGAGGTACACTCA+TGG | - | chr5.3:75257911-75257930 | MS.gene63795:intron | 30.0% |
| !!! | TCGGTCTTTCTTTTTTCTTA+AGG | - | chr5.3:75256966-75256985 | MS.gene63795:intron | 30.0% |
| !!! | TTATCCTTTTTTGCATGATG+TGG | - | chr5.3:75255883-75255902 | MS.gene63795:intron | 30.0% |
| AAATGGATGCTTATTTGTGC+AGG | - | chr5.3:75258364-75258383 | MS.gene63795:intron | 35.0% | |
| AAGAAATCATACCACATGCA+AGG | + | chr5.3:75258594-75258613 | None:intergenic | 35.0% | |
| AATTCAAGAGTTCCGAATTC+GGG | - | chr5.3:75255535-75255554 | MS.gene63795:intron | 35.0% | |
| ACATAATTCGTGTACTTTGG+TGG | - | chr5.3:75255499-75255518 | MS.gene63795:intron | 35.0% | |
| ACATCTTAATTCCATCTCGT+TGG | + | chr5.3:75258328-75258347 | None:intergenic | 35.0% | |
| ACTTCTGCTAAGGATATTGT+TGG | - | chr5.3:75259418-75259437 | MS.gene63795:CDS | 35.0% | |
| AGAAATCATACCACATGCAA+GGG | + | chr5.3:75258593-75258612 | None:intergenic | 35.0% | |
| AGACCGATCATATTGAAGAT+AGG | + | chr5.3:75256953-75256972 | None:intergenic | 35.0% | |
| ATACACACCGAAGCATATAT+TGG | - | chr5.3:75256697-75256716 | MS.gene63795:intron | 35.0% | |
| ATCTACTTCCTAGTGAATCA+AGG | - | chr5.3:75259113-75259132 | MS.gene63795:intron | 35.0% | |
| ATGAAGAATTCGGTACGTAT+GGG | + | chr5.3:75255988-75256007 | None:intergenic | 35.0% | |
| CAAATGCATTGCAAATCATG+TGG | + | chr5.3:75255760-75255779 | None:intergenic | 35.0% | |
| CAATTCAAGAGTTCCGAATT+CGG | - | chr5.3:75255534-75255553 | MS.gene63795:intron | 35.0% | |
| CTAATTTATGCGATAGTGCA+TGG | + | chr5.3:75258883-75258902 | None:intergenic | 35.0% | |
| CTCACTATCTACAATCACAA+CGG | - | chr5.3:75257950-75257969 | MS.gene63795:CDS | 35.0% | |
| CTGTATCTATGAATCATGTG+AGG | + | chr5.3:75254983-75255002 | None:intergenic | 35.0% | |
| CTTCTGCTAAGGATATTGTT+GGG | - | chr5.3:75259419-75259438 | MS.gene63795:CDS | 35.0% | |
| GAAGTGACACAATCTTGAAA+TGG | + | chr5.3:75259213-75259232 | None:intergenic | 35.0% | |
| GATGCAGTATAGCAAAAACT+AGG | + | chr5.3:75259022-75259041 | None:intergenic | 35.0% | |
| GCTGAAAATTTCCAAAGCAT+TGG | + | chr5.3:75256920-75256939 | None:intergenic | 35.0% | |
| GCTGCAAAATATAACAAAGC+AGG | + | chr5.3:75256326-75256345 | None:intergenic | 35.0% | |
| GTACACGAATTATGTTACTC+TGG | + | chr5.3:75255494-75255513 | None:intergenic | 35.0% | |
| GTCTGAATTGATGTCAAACA+AGG | - | chr5.3:75257200-75257219 | MS.gene63795:intron | 35.0% | |
| TATCAGCATTATCCTTTCAC+TGG | + | chr5.3:75255626-75255645 | None:intergenic | 35.0% | |
| TATTGTTCATGTGTGTTGTG+TGG | - | chr5.3:75256553-75256572 | MS.gene63795:intron | 35.0% | |
| TGGTTCTTGTACATCTCATT+CGG | - | chr5.3:75258069-75258088 | MS.gene63795:intron | 35.0% | |
| TTCTGCTAAGGATATTGTTG+GGG | - | chr5.3:75259420-75259439 | MS.gene63795:CDS | 35.0% | |
| TTGCAAATCATGTGGATTTG+AGG | + | chr5.3:75255752-75255771 | None:intergenic | 35.0% | |
| TTTAGATTTCTGAGCTAGGT+TGG | - | chr5.3:75257411-75257430 | MS.gene63795:CDS | 35.0% | |
| ! | AGTAGATTTAACTTCAACGG+AGG | + | chr5.3:75259100-75259119 | None:intergenic | 35.0% |
| ! | CACATGATTTGCAATGCATT+TGG | - | chr5.3:75255758-75255777 | MS.gene63795:CDS | 35.0% |
| ! | CTAAGGGTTAACTAAGTTGA+AGG | - | chr5.3:75255187-75255206 | MS.gene63795:intron | 35.0% |
| ! | GGTGTGTATAATCTGAAACA+TGG | + | chr5.3:75256686-75256705 | None:intergenic | 35.0% |
| ! | GTTAACTAAGTTGAAGGGTT+AGG | - | chr5.3:75255193-75255212 | MS.gene63795:intron | 35.0% |
| ! | GTTTATTTCCATGGTTTGCA+GGG | - | chr5.3:75256243-75256262 | MS.gene63795:CDS | 35.0% |
| ! | TAATCACTGATGAGTTGGAT+TGG | + | chr5.3:75258720-75258739 | None:intergenic | 35.0% |
| ! | TGTTTATTTCCATGGTTTGC+AGG | - | chr5.3:75256242-75256261 | MS.gene63795:CDS | 35.0% |
| !! | AATGGGTTTTACTTCTGCTA+AGG | - | chr5.3:75259408-75259427 | MS.gene63795:CDS | 35.0% |
| !!! | AGTCTGTTCATTTTAGTTCC+TGG | - | chr5.3:75258139-75258158 | MS.gene63795:intron | 35.0% |
| !!! | GAAGTCGTCAATTTTAGTTG+TGG | - | chr5.3:75256280-75256299 | MS.gene63795:CDS | 35.0% |
| !!! | TAAGTTTTGGGATCAGTACA+GGG | + | chr5.3:75258821-75258840 | None:intergenic | 35.0% |
| !!! | TCTACAATTCATGTCGGTTT+TGG | - | chr5.3:75256782-75256801 | MS.gene63795:intron | 35.0% |
| !!! | TTCAACTGGTTTTGAGCTAA+GGG | - | chr5.3:75255171-75255190 | MS.gene63795:CDS | 35.0% |
| !!! | TTTCAACTGGTTTTGAGCTA+AGG | - | chr5.3:75255170-75255189 | MS.gene63795:CDS | 35.0% |
| AAAATCTGCCATCCAACACA+GGG | - | chr5.3:75258692-75258711 | MS.gene63795:intron | 40.0% | |
| AAGAAATCACACGGATTCAG+CGG | + | chr5.3:75257039-75257058 | None:intergenic | 40.0% | |
| ACAATCTTGAAATGGTGAGC+TGG | + | chr5.3:75259205-75259224 | None:intergenic | 40.0% | |
| ACATAATTCGCAATTCGCGT+TGG | + | chr5.3:75256047-75256066 | None:intergenic | 40.0% | |
| ACCATACCCTACAAATGGAT+TGG | - | chr5.3:75254955-75254974 | MS.gene63795:CDS | 40.0% | |
| ACTATCTACAATCACAACGG+TGG | - | chr5.3:75257953-75257972 | MS.gene63795:CDS | 40.0% | |
| AGCACTTATGATACAGCCTA+AGG | + | chr5.3:75255379-75255398 | None:intergenic | 40.0% | |
| AGCTGAGAATGGAATGTTCA+AGG | + | chr5.3:75259242-75259261 | None:intergenic | 40.0% | |
| ATTAAGATTGCTGCTGCAGT+TGG | - | chr5.3:75258193-75258212 | MS.gene63795:intron | 40.0% | |
| ATTGCACAGGTGAAAATCAG+AGG | - | chr5.3:75258476-75258495 | MS.gene63795:intron | 40.0% | |
| ATTTGGTACGCGTGAATTCA+TGG | - | chr5.3:75255569-75255588 | MS.gene63795:intron | 40.0% | |
| CATGAAGAATTCGGTACGTA+TGG | + | chr5.3:75255989-75256008 | None:intergenic | 40.0% | |
| CGAATTCGGAACTCTTGAAT+TGG | + | chr5.3:75255536-75255555 | None:intergenic | 40.0% | |
| CTAACATCAACAAGCACATG+TGG | + | chr5.3:75259181-75259200 | None:intergenic | 40.0% | |
| CTAGGAGTAGGTATGTTGTT+TGG | - | chr5.3:75258049-75258068 | MS.gene63795:intron | 40.0% | |
| CTTAGTGGGAAAATTGCACA+AGG | + | chr5.3:75257524-75257543 | None:intergenic | 40.0% | |
| GAGGTTCCAATCCATTTGTA+GGG | + | chr5.3:75254964-75254983 | None:intergenic | 40.0% | |
| GCTCAGTAATATGCATAGAC+AGG | - | chr5.3:75256470-75256489 | MS.gene63795:intron | 40.0% | |
| GTATGGTGAAGAAGAACCAT+TGG | + | chr5.3:75254942-75254961 | None:intergenic | 40.0% | |
| GTCTCACTAGTGTTTATGCT+AGG | - | chr5.3:75256163-75256182 | MS.gene63795:intron | 40.0% | |
| GTGTCCTTATCCTAAGCTTA+CGG | + | chr5.3:75255700-75255719 | None:intergenic | 40.0% | |
| TAAAATCTGCCATCCAACAC+AGG | - | chr5.3:75258691-75258710 | MS.gene63795:intron | 40.0% | |
| TAAGGATATTGTTGGGGGTT+TGG | - | chr5.3:75259426-75259445 | MS.gene63795:CDS | 40.0% | |
| TACTCCTAGTACTCCATTGT+CGG | + | chr5.3:75258038-75258057 | None:intergenic | 40.0% | |
| TATGGTTGGGGAAACGTTAA+TGG | + | chr5.3:75257695-75257714 | None:intergenic | 40.0% | |
| TCCAATCCATTTGTAGGGTA+TGG | + | chr5.3:75254959-75254978 | None:intergenic | 40.0% | |
| TCTGCTAAGGATATTGTTGG+GGG | - | chr5.3:75259421-75259440 | MS.gene63795:CDS | 40.0% | |
| TCTTCACCATACCCTACAAA+TGG | - | chr5.3:75254950-75254969 | MS.gene63795:CDS | 40.0% | |
| TGAAGAATTCGGTACGTATG+GGG | + | chr5.3:75255987-75256006 | None:intergenic | 40.0% | |
| TGAGCCACATCATGCAAAAA+AGG | + | chr5.3:75255890-75255909 | None:intergenic | 40.0% | |
| TGAGGTTCCAATCCATTTGT+AGG | + | chr5.3:75254965-75254984 | None:intergenic | 40.0% | |
| TGGAGAATTCGCACAAATTG+CGG | - | chr5.3:75255589-75255608 | MS.gene63795:intron | 40.0% | |
| TGGCTGACCAATATATGCTT+CGG | + | chr5.3:75256707-75256726 | None:intergenic | 40.0% | |
| TGTAGTACCTTGAACACCAA+AGG | + | chr5.3:75255026-75255045 | None:intergenic | 40.0% | |
| TTTCGCCCACAATCAATAGA+AGG | + | chr5.3:75257440-75257459 | None:intergenic | 40.0% | |
| ! | ATGTTTTCAAACAGGGCCTT+AGG | - | chr5.3:75255360-75255379 | MS.gene63795:intron | 40.0% |
| ! | GGGTATTGTTGATCATGACA+AGG | - | chr5.3:75256443-75256462 | MS.gene63795:CDS | 40.0% |
| ! | TACTCGCAGAAGTGCAAAAA+GGG | + | chr5.3:75256579-75256598 | None:intergenic | 40.0% |
| ! | TATTTTGCAGCTTCTGGTGT+TGG | - | chr5.3:75256335-75256354 | MS.gene63795:intron | 40.0% |
| ! | TGTGCAATTTTCCCACTAAG+CGG | - | chr5.3:75257524-75257543 | MS.gene63795:intron | 40.0% |
| !! | AACCATTGGAAGCGTGTTTT+GGG | + | chr5.3:75254928-75254947 | None:intergenic | 40.0% |
| !! | AATCTTGATTTGCCGCTTAG+TGG | + | chr5.3:75257539-75257558 | None:intergenic | 40.0% |
| !! | ATCAAAGAGAAGCATCCTTC+CGG | + | chr5.3:75258230-75258249 | None:intergenic | 40.0% |
| !! | ATCTTGATTTGCCGCTTAGT+GGG | + | chr5.3:75257538-75257557 | None:intergenic | 40.0% |
| !! | CATTCTCAGCTTTAGAGTCT+AGG | - | chr5.3:75259251-75259270 | MS.gene63795:intron | 40.0% |
| !! | CTAGACTCTAAAGCTGAGAA+TGG | + | chr5.3:75259253-75259272 | None:intergenic | 40.0% |
| !!! | GTAAGTTTTGGGATCAGTAC+AGG | + | chr5.3:75258822-75258841 | None:intergenic | 40.0% |
| !!! | TCAATTTTAGTTGTGGGAGC+CGG | - | chr5.3:75256287-75256306 | MS.gene63795:CDS | 40.0% |
| AGAACAAATCGCAACAGCAG+GGG | + | chr5.3:75258104-75258123 | None:intergenic | 45.0% | |
| AGCAGTCACTGATCAGATAC+CGG | + | chr5.3:75257124-75257143 | None:intergenic | 45.0% | |
| ATGCATTGTCTGCACGAATC+CGG | - | chr5.3:75258248-75258267 | MS.gene63795:intron | 45.0% | |
| CAAAGGAAGGAAGAACAAGG+TGG | + | chr5.3:75255009-75255028 | None:intergenic | 45.0% | |
| CAACTCATCTGTTGAAGTCG+TGG | - | chr5.3:75256870-75256889 | MS.gene63795:intron | 45.0% | |
| CAACTTTGGCATGCTGATCT+AGG | + | chr5.3:75258013-75258032 | None:intergenic | 45.0% | |
| CACAGGTGAAAATCAGAGGA+AGG | - | chr5.3:75258480-75258499 | MS.gene63795:intron | 45.0% | |
| CACCAAAGGAAGGAAGAACA+AGG | + | chr5.3:75255012-75255031 | None:intergenic | 45.0% | |
| CACCTTGTTCTTCCTTCCTT+TGG | - | chr5.3:75255007-75255026 | MS.gene63795:CDS | 45.0% | |
| CAGAACAAATCGCAACAGCA+GGG | + | chr5.3:75258105-75258124 | None:intergenic | 45.0% | |
| CGTATGGGGATATAGAGCTT+CGG | + | chr5.3:75255973-75255992 | None:intergenic | 45.0% | |
| CTGCTGATCCTTGATTCACT+AGG | + | chr5.3:75259124-75259143 | None:intergenic | 45.0% | |
| GGAACTCTTGAATTGGATCG+CGG | + | chr5.3:75255529-75255548 | None:intergenic | 45.0% | |
| GTACCTTGAACACCAAAGGA+AGG | + | chr5.3:75255022-75255041 | None:intergenic | 45.0% | |
| GTCAAATGCACCGTAAGCTT+AGG | - | chr5.3:75255687-75255706 | MS.gene63795:intron | 45.0% | |
| TATCCTTTCACTGGAACGCT+TGG | + | chr5.3:75255617-75255636 | None:intergenic | 45.0% | |
| TCAGAACAAATCGCAACAGC+AGG | + | chr5.3:75258106-75258125 | None:intergenic | 45.0% | |
| TCCACAAGCTTCACAATGCA+TGG | + | chr5.3:75258507-75258526 | None:intergenic | 45.0% | |
| TCCATGCATTGTGAAGCTTG+TGG | - | chr5.3:75258503-75258522 | MS.gene63795:intron | 45.0% | |
| TCTGCGAACTTCCAATGCTT+TGG | - | chr5.3:75256906-75256925 | MS.gene63795:intron | 45.0% | |
| TCTTAATTGCCTCGAGAGCT+TGG | + | chr5.3:75258180-75258199 | None:intergenic | 45.0% | |
| TGAAGAAGAGGAAAAAGGCG+CGG | - | chr5.3:75259306-75259325 | MS.gene63795:CDS | 45.0% | |
| TGAATCAAGGATCAGCAGCA+TGG | - | chr5.3:75259126-75259145 | MS.gene63795:intron | 45.0% | |
| TGCACCGTAAGCTTAGGATA+AGG | - | chr5.3:75255693-75255712 | MS.gene63795:intron | 45.0% | |
| TGGAGACAGCCAATTATACC+AGG | + | chr5.3:75258160-75258179 | None:intergenic | 45.0% | |
| TGGGGGTTGCTTATTTCAAC+TGG | - | chr5.3:75255157-75255176 | MS.gene63795:CDS | 45.0% | |
| ! | GACAATGGAGTACTAGGAGT+AGG | - | chr5.3:75258037-75258056 | MS.gene63795:intron | 45.0% |
| ! | GGACGCCTTCTATTGATTGT+GGG | - | chr5.3:75257432-75257451 | MS.gene63795:intron | 45.0% |
| ! | GTACTCGCAGAAGTGCAAAA+AGG | + | chr5.3:75256580-75256599 | None:intergenic | 45.0% |
| ! | TGGACGCCTTCTATTGATTG+TGG | - | chr5.3:75257431-75257450 | MS.gene63795:intron | 45.0% |
| !! | ACCTACGCTACTAGCTTTGA+TGG | - | chr5.3:75255855-75255874 | MS.gene63795:intron | 45.0% |
| !! | AGCTTTAGAGTCTAGGTTGC+CGG | - | chr5.3:75259258-75259277 | MS.gene63795:intron | 45.0% |
| !! | CCTACGCTACTAGCTTTGAT+GGG | - | chr5.3:75255856-75255875 | MS.gene63795:intron | 45.0% |
| !! | CTACGCTACTAGCTTTGATG+GGG | - | chr5.3:75255857-75255876 | MS.gene63795:intron | 45.0% |
| !! | CTTCCTTCCTTTGGTGTTCA+AGG | - | chr5.3:75255016-75255035 | MS.gene63795:CDS | 45.0% |
| !! | GAACCATTGGAAGCGTGTTT+TGG | + | chr5.3:75254929-75254948 | None:intergenic | 45.0% |
| AACGGAGGCTGCATTTGCAT+TGG | + | chr5.3:75259085-75259104 | None:intergenic | 50.0% | |
| AGTGACTGCTGTGTGGTACT+AGG | - | chr5.3:75257134-75257153 | MS.gene63795:intron | 50.0% | |
| CAACAGATAATGCTCCCACC+CGG | - | chr5.3:75257102-75257121 | MS.gene63795:intron | 50.0% | |
| CCCATCAAAGCTAGTAGCGT+AGG | + | chr5.3:75255859-75255878 | None:intergenic | 50.0% | |
| CTCCCAAAACACGCTTCCAA+TGG | - | chr5.3:75254923-75254942 | MS.gene63795:CDS | 50.0% | |
| CTGCTGTGTGGTACTAGGAA+AGG | - | chr5.3:75257139-75257158 | MS.gene63795:CDS | 50.0% | |
| CTTTGGCATGCTGATCTAGG+TGG | + | chr5.3:75258010-75258029 | None:intergenic | 50.0% | |
| GCAGTCACTGATCAGATACC+GGG | + | chr5.3:75257123-75257142 | None:intergenic | 50.0% | |
| GTACCAAGCGTTCCAGTGAA+AGG | - | chr5.3:75255611-75255630 | MS.gene63795:intron | 50.0% | |
| TATAGAGCTTCGGTACGCGT+TGG | + | chr5.3:75255963-75255982 | None:intergenic | 50.0% | |
| TCACTGATCAGATACCGGGT+GGG | + | chr5.3:75257119-75257138 | None:intergenic | 50.0% | |
| TCGCAACAGCAGGGGAAAAA+TGG | + | chr5.3:75258096-75258115 | None:intergenic | 50.0% | |
| TCTGATCAGTGACTGCTGTG+TGG | - | chr5.3:75257127-75257146 | MS.gene63795:intron | 50.0% | |
| TGCATTGTCTGCACGAATCC+GGG | - | chr5.3:75258249-75258268 | MS.gene63795:intron | 50.0% | |
| TTCGGGTACCTCAGCGAATT+TGG | - | chr5.3:75255552-75255571 | MS.gene63795:intron | 50.0% | |
| ! | ATTTCCATGGTTTGCAGGGC+AGG | - | chr5.3:75256247-75256266 | MS.gene63795:CDS | 50.0% |
| ! | TGTTGGGGGTTTGGAGTCTT+GGG | - | chr5.3:75259435-75259454 | MS.gene63795:CDS | 50.0% |
| ! | TTACGCATTGGCCAACGAGA+TGG | - | chr5.3:75258314-75258333 | MS.gene63795:intron | 50.0% |
| ! | TTCGCTGAGGTACCCGAATT+CGG | + | chr5.3:75255550-75255569 | None:intergenic | 50.0% |
| ! | TTGTTGGGGGTTTGGAGTCT+TGG | - | chr5.3:75259434-75259453 | MS.gene63795:CDS | 50.0% |
| !! | GCAGCAGCGGATTTCACTTT+TGG | + | chr5.3:75256727-75256746 | None:intergenic | 50.0% |
| !! | GGAAAGAGGCATCGATAGCA+AGG | + | chr5.3:75257980-75257999 | None:intergenic | 50.0% |
| !! | TAGGTGGTGGAGTAGGAAAG+AGG | + | chr5.3:75257994-75258013 | None:intergenic | 50.0% |
| !!! | ATTTTAGTTGTGGGAGCCGG+AGG | - | chr5.3:75256290-75256309 | MS.gene63795:CDS | 50.0% |
| CACGCGTACCAAATTCGCTG+AGG | + | chr5.3:75255563-75255582 | None:intergenic | 55.0% | |
| CACTCAGACTCCCTTGCATG+TGG | - | chr5.3:75258580-75258599 | MS.gene63795:intron | 55.0% | |
| CTCCATTGTCGGCGCAACTT+TGG | + | chr5.3:75258027-75258046 | None:intergenic | 55.0% | |
| CTGTCCTTCCAATCCCACAG+CGG | + | chr5.3:75257840-75257859 | None:intergenic | 55.0% | |
| GATTGGCACCCTGTGTTGGA+TGG | + | chr5.3:75258703-75258722 | None:intergenic | 55.0% | |
| GTCACTGATCAGATACCGGG+TGG | + | chr5.3:75257120-75257139 | None:intergenic | 55.0% | |
| TGGCATGCTGATCTAGGTGG+TGG | + | chr5.3:75258007-75258026 | None:intergenic | 55.0% | |
| TTGGTGAACCACTCTCCGGA+AGG | - | chr5.3:75258212-75258231 | MS.gene63795:intron | 55.0% | |
| TTTGCCTGCCCTGCAAACCA+TGG | + | chr5.3:75256254-75256273 | None:intergenic | 55.0% | |
| ! | ATTCGCGTTGGTACGCGGTA+CGG | + | chr5.3:75256035-75256054 | None:intergenic | 55.0% |
| ! | TCGCAATTCGCGTTGGTACG+CGG | + | chr5.3:75256040-75256059 | None:intergenic | 55.0% |
| ! | TGCCAAAGTTGCGCCGACAA+TGG | - | chr5.3:75258022-75258041 | MS.gene63795:intron | 55.0% |
| ! | TGCGCCGACAATGGAGTACT+AGG | - | chr5.3:75258031-75258050 | MS.gene63795:intron | 55.0% |
| !! | AGAAGCATCCTTCCGGAGAG+TGG | + | chr5.3:75258223-75258242 | None:intergenic | 55.0% |
| !! | GCAGTTGGTGAACCACTCTC+CGG | - | chr5.3:75258208-75258227 | MS.gene63795:intron | 55.0% |
| !! | GCTGATCTAGGTGGTGGAGT+AGG | + | chr5.3:75258001-75258020 | None:intergenic | 55.0% |
| !! | GTTGGATTGGCACCCTGTGT+TGG | + | chr5.3:75258707-75258726 | None:intergenic | 55.0% |
| ACAGCGGCACCTGATACGAG+GGG | + | chr5.3:75257824-75257843 | None:intergenic | 60.0% | |
| AGTTGTGGGAGCCGGAGGAT+TGG | - | chr5.3:75256295-75256314 | MS.gene63795:CDS | 60.0% | |
| CACAGCGGCACCTGATACGA+GGG | + | chr5.3:75257825-75257844 | None:intergenic | 60.0% | |
| CACATGCAGCCCCTCGTATC+AGG | - | chr5.3:75257812-75257831 | MS.gene63795:CDS | 60.0% | |
| CGCTGTGGGATTGGAAGGAC+AGG | - | chr5.3:75257838-75257857 | MS.gene63795:CDS | 60.0% | |
| GTTGGTACGCGGTACGGGTA+CGG | + | chr5.3:75256029-75256048 | None:intergenic | 60.0% | |
| GTTGTGGGAGCCGGAGGATT+GGG | - | chr5.3:75256296-75256315 | MS.gene63795:CDS | 60.0% | |
| TGGCTGTCTCCAAGCTCTCG+AGG | - | chr5.3:75258168-75258187 | MS.gene63795:intron | 60.0% | |
| TTGGTACGCGGTACGGGTAC+GGG | + | chr5.3:75256028-75256047 | None:intergenic | 60.0% | |
| ! | TTCGCGTTGGTACGCGGTAC+GGG | + | chr5.3:75256034-75256053 | None:intergenic | 60.0% |
| !! | AGCAGGAGCACCCAATCCTC+CGG | + | chr5.3:75256309-75256328 | None:intergenic | 60.0% |
| !! | ATCAGGTGCCGCTGTGGGAT+TGG | - | chr5.3:75257829-75257848 | MS.gene63795:CDS | 60.0% |
| !! | CTCGTATCAGGTGCCGCTGT+GGG | - | chr5.3:75257824-75257843 | MS.gene63795:CDS | 60.0% |
| CCACAGCGGCACCTGATACG+AGG | + | chr5.3:75257826-75257845 | None:intergenic | 65.0% | |
| !! | CCTCGTATCAGGTGCCGCTG+TGG | - | chr5.3:75257823-75257842 | MS.gene63795:CDS | 65.0% |
| !! | GGTGCCGCTGTGGGATTGGA+AGG | - | chr5.3:75257833-75257852 | MS.gene63795:CDS | 65.0% |
| CGCGCGACAAGCAGCAGCAG+CGG | + | chr5.3:75256740-75256759 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 75254806 | 75259492 | 75254806 | ID=MS.gene63795 |
| chr5.3 | mRNA | 75254806 | 75259492 | 75254806 | ID=MS.gene63795.t1;Parent=MS.gene63795 |
| chr5.3 | exon | 75259261 | 75259492 | 75259261 | ID=MS.gene63795.t1.exon1;Parent=MS.gene63795.t1 |
| chr5.3 | CDS | 75259261 | 75259492 | 75259261 | ID=cds.MS.gene63795.t1;Parent=MS.gene63795.t1 |
| chr5.3 | exon | 75257942 | 75258034 | 75257942 | ID=MS.gene63795.t1.exon2;Parent=MS.gene63795.t1 |
| chr5.3 | CDS | 75257942 | 75258034 | 75257942 | ID=cds.MS.gene63795.t1;Parent=MS.gene63795.t1 |
| chr5.3 | exon | 75257807 | 75257862 | 75257807 | ID=MS.gene63795.t1.exon3;Parent=MS.gene63795.t1 |
| chr5.3 | CDS | 75257807 | 75257862 | 75257807 | ID=cds.MS.gene63795.t1;Parent=MS.gene63795.t1 |
| chr5.3 | exon | 75257540 | 75257604 | 75257540 | ID=MS.gene63795.t1.exon4;Parent=MS.gene63795.t1 |
| chr5.3 | CDS | 75257540 | 75257604 | 75257540 | ID=cds.MS.gene63795.t1;Parent=MS.gene63795.t1 |
| chr5.3 | exon | 75257357 | 75257431 | 75257357 | ID=MS.gene63795.t1.exon5;Parent=MS.gene63795.t1 |
| chr5.3 | CDS | 75257357 | 75257431 | 75257357 | ID=cds.MS.gene63795.t1;Parent=MS.gene63795.t1 |
| chr5.3 | exon | 75257138 | 75257216 | 75257138 | ID=MS.gene63795.t1.exon6;Parent=MS.gene63795.t1 |
| chr5.3 | CDS | 75257138 | 75257216 | 75257138 | ID=cds.MS.gene63795.t1;Parent=MS.gene63795.t1 |
| chr5.3 | exon | 75256439 | 75256477 | 75256439 | ID=MS.gene63795.t1.exon7;Parent=MS.gene63795.t1 |
| chr5.3 | CDS | 75256439 | 75256477 | 75256439 | ID=cds.MS.gene63795.t1;Parent=MS.gene63795.t1 |
| chr5.3 | exon | 75256240 | 75256348 | 75256240 | ID=MS.gene63795.t1.exon8;Parent=MS.gene63795.t1 |
| chr5.3 | CDS | 75256240 | 75256348 | 75256240 | ID=cds.MS.gene63795.t1;Parent=MS.gene63795.t1 |
| chr5.3 | exon | 75256025 | 75256143 | 75256025 | ID=MS.gene63795.t1.exon9;Parent=MS.gene63795.t1 |
| chr5.3 | CDS | 75256025 | 75256143 | 75256025 | ID=cds.MS.gene63795.t1;Parent=MS.gene63795.t1 |
| chr5.3 | exon | 75255697 | 75255813 | 75255697 | ID=MS.gene63795.t1.exon10;Parent=MS.gene63795.t1 |
| chr5.3 | CDS | 75255697 | 75255813 | 75255697 | ID=cds.MS.gene63795.t1;Parent=MS.gene63795.t1 |
| chr5.3 | exon | 75254806 | 75255201 | 75254806 | ID=MS.gene63795.t1.exon11;Parent=MS.gene63795.t1 |
| chr5.3 | CDS | 75254806 | 75255201 | 75254806 | ID=cds.MS.gene63795.t1;Parent=MS.gene63795.t1 |
| Gene Sequence |
| Protein sequence |
