Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058788.t1 | XP_003598013.1 | 65.6 | 192 | 25 | 2 | 5 | 155 | 48 | 239 | 5.90E-52 | 213.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058788.t1 | G7IYD2 | 65.6 | 192 | 25 | 2 | 5 | 155 | 48 | 239 | 4.3e-52 | 213.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene056422 | MS.gene058788 | 0.813441 | 2.56E-51 | -1.69E-46 |
| MS.gene058787 | MS.gene058788 | 0.826412 | 2.75E-54 | -1.69E-46 |
| MS.gene058788 | MS.gene060403 | 0.806297 | 8.81E-50 | -1.69E-46 |
| MS.gene058788 | MS.gene08832 | 0.807243 | 5.56E-50 | -1.69E-46 |
| MS.gene058788 | MS.gene21675 | 0.812315 | 4.51E-51 | -1.69E-46 |
| MS.gene058788 | MS.gene28490 | 0.802847 | 4.62E-49 | -1.69E-46 |
| MS.gene058788 | MS.gene39979 | 0.819515 | 1.12E-52 | -1.69E-46 |
| MS.gene058788 | MS.gene44977 | 0.814926 | 1.20E-51 | -1.69E-46 |
| MS.gene058788 | MS.gene46645 | 0.814921 | 1.20E-51 | -1.69E-46 |
| MS.gene058788 | MS.gene47389 | 0.81099 | 8.76E-51 | -1.69E-46 |
| MS.gene058788 | MS.gene50834 | 0.835536 | 1.59E-56 | -1.69E-46 |
| MS.gene058788 | MS.gene52101 | 0.802459 | 5.55E-49 | -1.69E-46 |
| MS.gene058788 | MS.gene62822 | 0.80829 | 3.33E-50 | -1.69E-46 |
| MS.gene058788 | MS.gene73334 | 0.826642 | 2.42E-54 | -1.69E-46 |
| MS.gene058788 | MS.gene76346 | 0.806673 | 7.34E-50 | -1.69E-46 |
| MS.gene058788 | MS.gene82878 | 0.806225 | 9.12E-50 | -1.69E-46 |
| MS.gene058788 | MS.gene85140 | 0.804635 | 1.96E-49 | -1.69E-46 |
| MS.gene058788 | MS.gene86306 | 0.803577 | 3.26E-49 | -1.69E-46 |
| MS.gene058788 | MS.gene87404 | 0.80986 | 1.54E-50 | -1.69E-46 |
| MS.gene058788 | MS.gene87890 | 0.80427 | 2.34E-49 | -1.69E-46 |
| MS.gene058788 | MS.gene89058 | 0.800072 | 1.71E-48 | -1.69E-46 |
| MS.gene058788 | MS.gene90135 | 0.825819 | 3.81E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 0 sgRNAs with CRISPR-Local
Find 172 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTTTTTTTTATAA+TGG | - | 24311:3595-3614 | MS.gene058788:intron | 0.0% |
| !!! | TTTGAATACTTTTTTTAAAA+TGG | - | 24311:2782-2801 | MS.gene058788:intron | 10.0% |
| !! | AATAAATAAAATGTTAAGAG+AGG | + | 24311:3899-3918 | MS.gene058788:intergenic | 15.0% |
| !! | TTAAACAATTATTAAGTGTT+AGG | + | 24311:2756-2775 | MS.gene058788:intergenic | 15.0% |
| !!! | AATACTTTTTTTAAAATGGT+CGG | - | 24311:2786-2805 | MS.gene058788:intron | 15.0% |
| !!! | AATTTGCTATTTTGTAAATT+TGG | - | 24311:2717-2736 | MS.gene058788:intron | 15.0% |
| !!! | ATTTGCTATTTTGTAAATTT+GGG | - | 24311:2718-2737 | MS.gene058788:intron | 15.0% |
| !! | AAAATATTAGAGTAATCCTA+TGG | + | 24311:3725-3744 | MS.gene058788:intergenic | 20.0% |
| !! | AAATATTAGAGTAATCCTAT+GGG | + | 24311:3724-3743 | MS.gene058788:intergenic | 20.0% |
| !! | AGAAAATAGATAGTAGTAAA+TGG | - | 24311:3465-3484 | MS.gene058788:intron | 20.0% |
| !! | ATTAATAAAATTAAGCAACG+TGG | - | 24311:3664-3683 | MS.gene058788:intron | 20.0% |
| !! | TTAATAAAATTAAGCAACGT+GGG | - | 24311:3665-3684 | MS.gene058788:intron | 20.0% |
| !!! | ATACTTTTTTTAAAATGGTC+GGG | - | 24311:2787-2806 | MS.gene058788:intron | 20.0% |
| !!! | ATTTTTCCAAAGTAAAGTAT+TGG | + | 24311:3203-3222 | MS.gene058788:intergenic | 20.0% |
| !!! | TGACAAATTTTTAAAGAGAA+CGG | - | 24311:3351-3370 | MS.gene058788:intron | 20.0% |
| !!! | TTTGCTATTTTGTAAATTTG+GGG | - | 24311:2719-2738 | MS.gene058788:intron | 20.0% |
| ! | AAATAGATAGTAGTAAATGG+TGG | - | 24311:3468-3487 | MS.gene058788:intron | 25.0% |
| ! | AACAAAAATGTCAAAATGAG+AGG | - | 24311:3409-3428 | MS.gene058788:intron | 25.0% |
| ! | ACGCTATTTAGTTAGAATAA+TGG | + | 24311:2987-3006 | MS.gene058788:intergenic | 25.0% |
| ! | ATTTAGTTAGAATAATGGCA+TGG | + | 24311:2982-3001 | MS.gene058788:intergenic | 25.0% |
| ! | TATTAAGTGTTAGGACAATT+TGG | + | 24311:2747-2766 | MS.gene058788:intergenic | 25.0% |
| !! | TACTTTACTTTGGAAAAATC+AGG | - | 24311:3204-3223 | MS.gene058788:intron | 25.0% |
| !! | TATTTAAGACTCCTATTAGA+CGG | - | 24311:2651-2670 | MS.gene058788:intron | 25.0% |
| !!! | AATATTGAGTTGACAAGTTA+TGG | + | 24311:2635-2654 | MS.gene058788:intergenic | 25.0% |
| !!! | TACTTTTTTTAAAATGGTCG+GGG | - | 24311:2788-2807 | MS.gene058788:intron | 25.0% |
| AAAAAACGACATTTGATGCT+TGG | + | 24311:3117-3136 | MS.gene058787:intergenic | 30.0% | |
| AAAAATGTCAAAATGAGAGG+TGG | - | 24311:3412-3431 | MS.gene058788:intron | 30.0% | |
| AAACTTTGAATTGCTTCACT+TGG | - | 24311:4146-4165 | MS.gene058788:intron | 30.0% | |
| AAAGTTTATCCCTGAATGAA+AGG | + | 24311:3785-3804 | MS.gene058788:intergenic | 30.0% | |
| AACTTTGAATTGCTTCACTT+GGG | - | 24311:4147-4166 | MS.gene058788:intron | 30.0% | |
| AAGTCAAAGAGAAATTTCAG+AGG | - | 24311:4210-4229 | MS.gene058788:intron | 30.0% | |
| AAGTTTATCCCTGAATGAAA+GGG | + | 24311:3784-3803 | MS.gene058788:intergenic | 30.0% | |
| ACGTATAAAAGCTATCTTGT+CGG | - | 24311:2563-2582 | MS.gene058788:intron | 30.0% | |
| ACTTGCTCTTAAACACTTTA+AGG | - | 24311:2433-2452 | MS.gene058788:CDS | 30.0% | |
| ATTACACTCAAACAACTTCA+AGG | - | 24311:2456-2475 | MS.gene058788:CDS | 30.0% | |
| CTTTGTTGACAAATAAAGAC+AGG | + | 24311:4125-4144 | MS.gene058788:intergenic | 30.0% | |
| TGAGCAAAAATTAACGATGA+AGG | - | 24311:3506-3525 | MS.gene058788:intron | 30.0% | |
| ! | AGAGTAAGTTTTACAAGTGA+TGG | + | 24311:3177-3196 | MS.gene058788:intergenic | 30.0% |
| ! | CTGTCTTTATTTGTCAACAA+AGG | - | 24311:4123-4142 | MS.gene058788:intron | 30.0% |
| ! | GATATAAGACTAGTTGTTGA+AGG | + | 24311:3854-3873 | MS.gene058788:intergenic | 30.0% |
| ! | TGAAAAGTGAAGAAGTTGAT+CGG | - | 24311:4317-4336 | MS.gene058788:intron | 30.0% |
| !! | TTTCCAAAGTAAAGTATTGG+AGG | + | 24311:3200-3219 | MS.gene058788:intergenic | 30.0% |
| AATTTCAGAGGCAAAAGCTA+TGG | - | 24311:4222-4241 | MS.gene058788:intron | 35.0% | |
| AGTAGGGATAAAATTTCCTC+CGG | - | 24311:3956-3975 | MS.gene058788:intron | 35.0% | |
| ATATACCGTAAGGAGAAACT+TGG | - | 24311:4504-4523 | MS.gene058788:intron | 35.0% | |
| ATCATCCAAGTTTCTCCTTA+CGG | + | 24311:4512-4531 | MS.gene058788:intergenic | 35.0% | |
| ATTCATCCAACCTACTTCTA+AGG | + | 24311:3554-3573 | MS.gene058788:intergenic | 35.0% | |
| CATATACCTCAAGATTCAAG+AGG | - | 24311:3924-3943 | MS.gene058788:intron | 35.0% | |
| CTCTTGAATCTTGAGGTATA+TGG | + | 24311:3926-3945 | MS.gene058788:intergenic | 35.0% | |
| CTTAGCAATCTCAACTCTTT+GGG | + | 24311:2384-2403 | MS.gene058788:intergenic | 35.0% | |
| GTCGAAAAGTTAGAGAGAAA+AGG | - | 24311:3328-3347 | MS.gene058788:intron | 35.0% | |
| TACGCATAGAACCAATTAAC+AGG | - | 24311:3635-3654 | MS.gene058788:intron | 35.0% | |
| TAGTAGTAAATGGTGGTCAA+AGG | - | 24311:3475-3494 | MS.gene058788:intron | 35.0% | |
| TCTACTTACATCAACCATGT+TGG | + | 24311:3390-3409 | MS.gene058788:intergenic | 35.0% | |
| TCTCCTCCAATACTTTACTT+TGG | - | 24311:3194-3213 | MS.gene058788:intron | 35.0% | |
| TCTTAGCAATCTCAACTCTT+TGG | + | 24311:2385-2404 | MS.gene058788:intergenic | 35.0% | |
| TTAATCACTCGCCTGTTAAT+TGG | + | 24311:3649-3668 | MS.gene058788:intergenic | 35.0% | |
| TTCGTATGTTGTGCATTGTT+TGG | - | 24311:4469-4488 | MS.gene058788:intron | 35.0% | |
| TTCTAACTAAATAGCGTAGC+AGG | - | 24311:2990-3009 | MS.gene058788:intron | 35.0% | |
| TTGTATACATGCACTCGTTA+TGG | - | 24311:4052-4071 | MS.gene058788:intron | 35.0% | |
| ! | AAGTTTTACAAGTGATGGTC+AGG | + | 24311:3172-3191 | MS.gene058788:intergenic | 35.0% |
| ! | GAAAAGTGAAGAAGTTGATC+GGG | - | 24311:4318-4337 | MS.gene058788:intron | 35.0% |
| ! | TGACTTTTCGATATACCGTA+AGG | - | 24311:4494-4513 | MS.gene058788:intron | 35.0% |
| ! | TTAGAAGTAGGTTGGATGAA+TGG | - | 24311:3553-3572 | MS.gene058788:intron | 35.0% |
| ! | TTTTCTTGCCCTTTCATTCA+GGG | - | 24311:3773-3792 | MS.gene058788:intron | 35.0% |
| ! | TTTTTCTTGCCCTTTCATTC+AGG | - | 24311:3772-3791 | MS.gene058788:intron | 35.0% |
| AACTTGATATGCAACTGCAG+AGG | + | 24311:2890-2909 | MS.gene058788:intergenic | 40.0% | |
| ACGAGTGCATGTATACAACA+AGG | + | 24311:4050-4069 | MS.gene058788:intergenic | 40.0% | |
| ACGCTAAAATTGATACACCC+AGG | - | 24311:2857-2876 | MS.gene058788:intron | 40.0% | |
| AGCTATCTTGTCGGAACTTA+TGG | - | 24311:2572-2591 | MS.gene058788:intron | 40.0% | |
| AGTTCAGCAGTGAAGCATAA+AGG | + | 24311:3982-4001 | MS.gene058788:intergenic | 40.0% | |
| ATACCTCAAGATTCAAGAGG+AGG | - | 24311:3927-3946 | MS.gene058788:intron | 40.0% | |
| ATGATGCTCAGCTTAAGACT+GGG | - | 24311:4527-4546 | MS.gene058788:CDS | 40.0% | |
| ATTTGATGCTTGGTAGATGG+TGG | + | 24311:3107-3126 | MS.gene058788:intergenic | 40.0% | |
| CGAGTGCATGTATACAACAA+GGG | + | 24311:4049-4068 | MS.gene058788:intergenic | 40.0% | |
| CGCTAAAATTGATACACCCA+GGG | - | 24311:2858-2877 | MS.gene058788:intron | 40.0% | |
| CTGCAGTTGCATATCAAGTT+TGG | - | 24311:2890-2909 | MS.gene058788:intron | 40.0% | |
| GAAATCGTAAAATCTCGCAG+TGG | - | 24311:3260-3279 | MS.gene058788:intron | 40.0% | |
| GACATTTGATGCTTGGTAGA+TGG | + | 24311:3110-3129 | MS.gene058788:intergenic | 40.0% | |
| GAGTGCATGTATACAACAAG+GGG | + | 24311:4048-4067 | MS.gene058788:intergenic | 40.0% | |
| TAACGATGAAGGAGATCCAT+GGG | - | 24311:3517-3536 | MS.gene058788:intron | 40.0% | |
| TCAAGATTCAAGAGGAGGAA+GGG | - | 24311:3932-3951 | MS.gene058788:intron | 40.0% | |
| TTAACGATGAAGGAGATCCA+TGG | - | 24311:3516-3535 | MS.gene058788:intron | 40.0% | |
| TTATGCTCTCCCATATGCAT+CGG | + | 24311:2820-2839 | MS.gene058788:intergenic | 40.0% | |
| TTTACAAGTGATGGTCAGGT+GGG | + | 24311:3168-3187 | MS.gene058788:intergenic | 40.0% | |
| ! | CATATGGGAGAGCATAATGT+AGG | - | 24311:2823-2842 | MS.gene058788:intron | 40.0% |
| ! | GGTTGATGTTCTGTAATCTG+TGG | - | 24311:2690-2709 | MS.gene058788:intron | 40.0% |
| ! | TTTTACAAGTGATGGTCAGG+TGG | + | 24311:3169-3188 | MS.gene058788:intergenic | 40.0% |
| !! | AACGCACTTTCTGGAATGAT+GGG | - | 24311:2289-2308 | MS.gene058788:CDS | 40.0% |
| !! | ACAGGAGTACTTCAGTAACA+AGG | + | 24311:4107-4126 | MS.gene058788:intergenic | 40.0% |
| !! | GTTGAAGGCTTTAAGCATAG+AGG | + | 24311:3839-3858 | MS.gene058788:intergenic | 40.0% |
| !!! | GCAAGAACGTTACTTTTACC+TGG | + | 24311:2491-2510 | MS.gene058788:intergenic | 40.0% |
| !!! | GCAGCTTTTGGTGTTGTTAA+AGG | - | 24311:4555-4574 | MS.gene058788:CDS | 40.0% |
| !!! | GTTTTTTGTCATGCAAACGC+CGG | - | 24311:3130-3149 | MS.gene058788:intron | 40.0% |
| AACGATGAAGGAGATCCATG+GGG | - | 24311:3518-3537 | MS.gene058788:intron | 45.0% | |
| AAGAACGAGGTGCATTCATG+GGG | - | 24311:4293-4312 | MS.gene058788:intron | 45.0% | |
| AAGTCCCTCTACCGTCTAAT+AGG | + | 24311:2665-2684 | MS.gene058788:intergenic | 45.0% | |
| ACTTCAAGGAAACGCTTTCC+AGG | - | 24311:2470-2489 | MS.gene058788:CDS | 45.0% | |
| AGACTCCTATTAGACGGTAG+AGG | - | 24311:2657-2676 | MS.gene058788:intron | 45.0% | |
| AGAGATGATGAGAGAGGAGA+GGG | + | 24311:3056-3075 | MS.gene058788:intergenic | 45.0% | |
| AGAGCATAATGTAGGCAGAG+GGG | - | 24311:2831-2850 | MS.gene058788:intron | 45.0% | |
| AGCAATCTCAACTCTTTGGG+AGG | + | 24311:2381-2400 | MS.gene058788:intergenic | 45.0% | |
| CAAGATTCAAGAGGAGGAAG+GGG | - | 24311:3933-3952 | MS.gene058788:intron | 45.0% | |
| CATCAACCATGTTGGTCACT+AGG | + | 24311:3382-3401 | MS.gene058788:intergenic | 45.0% | |
| CCACTAGTTGAGCAATGTGA+AGG | - | 24311:3688-3707 | MS.gene058788:intron | 45.0% | |
| CCTTCACATTGCTCAACTAG+TGG | + | 24311:3691-3710 | MS.gene058788:intergenic | 45.0% | |
| CGATTTGAGAACGCACTTTC+TGG | - | 24311:2280-2299 | MS.gene058788:CDS | 45.0% | |
| CTCAAGATTCAAGAGGAGGA+AGG | - | 24311:3931-3950 | MS.gene058788:intron | 45.0% | |
| CTCTTTGTTGCCTAAATGCC+GGG | - | 24311:4262-4281 | MS.gene058788:intron | 45.0% | |
| CTTCCTCCTCTTGAATCTTG+AGG | + | 24311:3933-3952 | MS.gene058788:intergenic | 45.0% | |
| GAAGAACGAGGTGCATTCAT+GGG | - | 24311:4292-4311 | MS.gene058788:intron | 45.0% | |
| GAAGGAAAGAGTTTGCCCAT+AGG | - | 24311:3706-3725 | MS.gene058788:intron | 45.0% | |
| GACGGTAGAGGGACTTATAT+TGG | - | 24311:2669-2688 | MS.gene058788:intron | 45.0% | |
| GACTCCTATTAGACGGTAGA+GGG | - | 24311:2658-2677 | MS.gene058788:intron | 45.0% | |
| GAGATACCTAGTGACCAACA+TGG | - | 24311:3373-3392 | MS.gene058788:intron | 45.0% | |
| GATCGTGTAACCTTTGTTCG+TGG | - | 24311:3303-3322 | MS.gene058788:intron | 45.0% | |
| GATGATGCTCAGCTTAAGAC+TGG | - | 24311:4526-4545 | MS.gene058788:CDS | 45.0% | |
| GCTCTTTGTTGCCTAAATGC+CGG | - | 24311:4261-4280 | MS.gene058788:intron | 45.0% | |
| GGATGAAGAGAGATTGGAGT+CGG | - | 24311:4339-4358 | MS.gene058788:intron | 45.0% | |
| GGGTTTGATCCGATGCATAT+GGG | - | 24311:2808-2827 | MS.gene058788:intron | 45.0% | |
| TAAATAGCGTAGCAGGCAAC+CGG | - | 24311:2997-3016 | MS.gene058788:intron | 45.0% | |
| TGAAGAACGAGGTGCATTCA+TGG | - | 24311:4291-4310 | MS.gene058788:intron | 45.0% | |
| TGATCGGGATGAAGAGAGAT+TGG | - | 24311:4333-4352 | MS.gene058788:intron | 45.0% | |
| ! | AATGTGGTGACTAGTTGTGC+CGG | + | 24311:3019-3038 | MS.gene058788:intergenic | 45.0% |
| ! | GAGAGCATAATGTAGGCAGA+GGG | - | 24311:2830-2849 | MS.gene058788:intron | 45.0% |
| ! | GCAATCTCAACTCTTTGGGA+GGG | + | 24311:2380-2399 | MS.gene058788:intergenic | 45.0% |
| ! | GGTAGATGGTGGTAACTAGA+TGG | + | 24311:3096-3115 | MS.gene058788:intergenic | 45.0% |
| !! | AGATGGATTGAGAGAGAGAG+AGG | + | 24311:3079-3098 | MS.gene058788:intergenic | 45.0% |
| !! | AGGCTTTAAGCATAGAGGTC+TGG | + | 24311:3834-3853 | MS.gene058788:intergenic | 45.0% |
| !! | GAACGCACTTTCTGGAATGA+TGG | - | 24311:2288-2307 | MS.gene058788:CDS | 45.0% |
| AACTCAGCTGCTTCTCTCTG+TGG | - | 24311:4438-4457 | MS.gene058788:CDS | 50.0% | |
| ACAGAGAGAAGCAGCTGAGT+TGG | + | 24311:4439-4458 | MS.gene058788:intergenic | 50.0% | |
| AGGTGGGTGTGGTATGTTAC+CGG | + | 24311:3152-3171 | MS.gene058788:intergenic | 50.0% | |
| CAGAGAGAAGCAGCTGAGTT+GGG | + | 24311:4438-4457 | MS.gene058788:intergenic | 50.0% | |
| CAGCAGTGAAGCATAAAGGC+CGG | + | 24311:3978-3997 | MS.gene058788:intergenic | 50.0% | |
| CATCGCAGTAGGTGTGTTGT+TGG | + | 24311:2956-2975 | MS.gene058788:intergenic | 50.0% | |
| CCCTTGTTGGCACTTTGTCA+GGG | - | 24311:4383-4402 | MS.gene058788:CDS | 50.0% | |
| CGTGTAACCTTTGTTCGTGG+CGG | - | 24311:3306-3325 | MS.gene058788:intron | 50.0% | |
| GAGAGATGATGAGAGAGGAG+AGG | + | 24311:3057-3076 | MS.gene058788:intergenic | 50.0% | |
| GAGAGGAGAGATGATGAGAG+AGG | + | 24311:3062-3081 | MS.gene058788:intergenic | 50.0% | |
| GAGGCAAAAGCTATGGCTTG+AGG | - | 24311:4229-4248 | MS.gene058788:intron | 50.0% | |
| GCATCTATCTCTGCCCTTGT+TGG | - | 24311:4370-4389 | MS.gene058788:intron | 50.0% | |
| GGAGAGAGAGAGAGAGAATG+TGG | + | 24311:3035-3054 | MS.gene058788:intergenic | 50.0% | |
| GGGGTTTGATCCGATGCATA+TGG | - | 24311:2807-2826 | MS.gene058788:intron | 50.0% | |
| GTGGCCTGAGTGAAGCATAT+GGG | + | 24311:4412-4431 | MS.gene058788:intergenic | 50.0% | |
| TGGCCTGAGTGAAGCATATG+GGG | + | 24311:4411-4430 | MS.gene058788:intergenic | 50.0% | |
| TGGCTGCCTTAGAAGTAGGT+TGG | - | 24311:3545-3564 | MS.gene058788:intron | 50.0% | |
| TTTGTTGCCTAAATGCCGGG+AGG | - | 24311:4265-4284 | MS.gene058788:intron | 50.0% | |
| ! | AGGTTGGCTGCCTTAGAAGT+AGG | - | 24311:3541-3560 | MS.gene058788:intron | 50.0% |
| ! | CCCTGACAAAGTGCCAACAA+GGG | + | 24311:4386-4405 | MS.gene058788:intergenic | 50.0% |
| ! | GGAGAGCATAATGTAGGCAG+AGG | - | 24311:2829-2848 | MS.gene058788:intron | 50.0% |
| ! | TTTTCGACCGCCACGAACAA+AGG | + | 24311:3316-3335 | MS.gene058788:intergenic | 50.0% |
| AACTGCAGAGGACAAGTCCC+TGG | + | 24311:2878-2897 | MS.gene058788:intergenic | 55.0% | |
| AAGGAGATCCATGGGGAGGT+TGG | - | 24311:3525-3544 | MS.gene058788:intron | 55.0% | |
| AAGTGATGGTCAGGTGGGTG+TGG | + | 24311:3163-3182 | MS.gene058788:intergenic | 55.0% | |
| ACTGCAGAGGACAAGTCCCT+GGG | + | 24311:2877-2896 | MS.gene058788:intergenic | 55.0% | |
| CAAGAGGAGGAAGGGGAGTA+GGG | - | 24311:3940-3959 | MS.gene058788:intron | 55.0% | |
| CAGTGAAGCATAAAGGCCGG+AGG | + | 24311:3975-3994 | MS.gene058788:intergenic | 55.0% | |
| GATGAAGGAGATCCATGGGG+AGG | - | 24311:3521-3540 | MS.gene058788:intron | 55.0% | |
| GCCCTTGTTGGCACTTTGTC+AGG | - | 24311:4382-4401 | MS.gene058788:CDS | 55.0% | |
| GCTCCCCATATGCTTCACTC+AGG | - | 24311:4405-4424 | MS.gene058788:CDS | 55.0% | |
| GGTGGCCTGAGTGAAGCATA+TGG | + | 24311:4413-4432 | MS.gene058788:intergenic | 55.0% | |
| TCAAGAGGAGGAAGGGGAGT+AGG | - | 24311:3939-3958 | MS.gene058788:intron | 55.0% | |
| TTCAGCACCTCCCGGCATTT+AGG | + | 24311:4275-4294 | MS.gene058788:intergenic | 55.0% | |
| ! | GACTGGGTTGCAGCAGCTTT+TGG | - | 24311:4543-4562 | MS.gene058788:CDS | 55.0% |
| ! | GAGAAGCAGCTGAGTTGGGT+TGG | + | 24311:4434-4453 | MS.gene058788:intergenic | 55.0% |
| ! | GCCCTGACAAAGTGCCAACA+AGG | + | 24311:4387-4406 | MS.gene058788:intergenic | 55.0% |
| !! | AAGCAGCTGAGTTGGGTTGG+TGG | + | 24311:4431-4450 | MS.gene058788:intergenic | 55.0% |
| CCTCGTTCTTCAGCACCTCC+CGG | + | 24311:4283-4302 | MS.gene058788:intergenic | 60.0% | |
| TAAGGCAGCCAACCTCCCCA+TGG | + | 24311:3536-3555 | MS.gene058788:intergenic | 60.0% | |
| TGGCATGGCAGCATCGCAGT+AGG | + | 24311:2967-2986 | MS.gene058788:intergenic | 60.0% | |
| !! | CCGGGAGGTGCTGAAGAACG+AGG | - | 24311:4280-4299 | MS.gene058788:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 24311 | gene | 2273 | 4590 | 2273 | ID=MS.gene058788 |
| 24311 | mRNA | 2273 | 4590 | 2273 | ID=MS.gene058788.t1;Parent=MS.gene058788 |
| 24311 | exon | 4512 | 4590 | 4512 | ID=MS.gene058788.t1.exon1;Parent=MS.gene058788.t1 |
| 24311 | CDS | 4512 | 4590 | 4512 | ID=cds.MS.gene058788.t1;Parent=MS.gene058788.t1 |
| 24311 | exon | 4372 | 4468 | 4372 | ID=MS.gene058788.t1.exon2;Parent=MS.gene058788.t1 |
| 24311 | CDS | 4372 | 4468 | 4372 | ID=cds.MS.gene058788.t1;Parent=MS.gene058788.t1 |
| 24311 | exon | 2273 | 2576 | 2273 | ID=MS.gene058788.t1.exon3;Parent=MS.gene058788.t1 |
| 24311 | CDS | 2273 | 2576 | 2273 | ID=cds.MS.gene058788.t1;Parent=MS.gene058788.t1 |
| Gene Sequence |
| Protein sequence |
