Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39979.t1 | XP_003590639.1 | 98.1 | 262 | 5 | 0 | 1 | 262 | 1 | 262 | 2.00E-129 | 471.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39979.t1 | P37706 | 69.9 | 226 | 66 | 2 | 37 | 262 | 4 | 227 | 5.6e-80 | 298.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39979.t1 | B7FI72 | 98.1 | 262 | 5 | 0 | 1 | 262 | 1 | 262 | 1.4e-129 | 471.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene39979 | 0.858339 | 8.82E-63 | -1.69E-46 |
| MS.gene049171 | MS.gene39979 | 0.808828 | 2.56E-50 | -1.69E-46 |
| MS.gene049217 | MS.gene39979 | 0.817762 | 2.79E-52 | -1.69E-46 |
| MS.gene049222 | MS.gene39979 | 0.839489 | 1.54E-57 | -1.69E-46 |
| MS.gene049285 | MS.gene39979 | 0.823334 | 1.46E-53 | -1.69E-46 |
| MS.gene049320 | MS.gene39979 | 0.82176 | 3.40E-53 | -1.69E-46 |
| MS.gene049351 | MS.gene39979 | 0.824437 | 8.07E-54 | -1.69E-46 |
| MS.gene049369 | MS.gene39979 | 0.816065 | 6.70E-52 | -1.69E-46 |
| MS.gene049427 | MS.gene39979 | 0.883916 | 2.99E-71 | -1.69E-46 |
| MS.gene049609 | MS.gene39979 | 0.854579 | 1.12E-61 | -1.69E-46 |
| MS.gene049615 | MS.gene39979 | 0.858494 | 7.93E-63 | -1.69E-46 |
| MS.gene049661 | MS.gene39979 | 0.833799 | 4.33E-56 | -1.69E-46 |
| MS.gene049662 | MS.gene39979 | 0.82481 | 6.60E-54 | -1.69E-46 |
| MS.gene049805 | MS.gene39979 | 0.871979 | 4.52E-67 | -1.69E-46 |
| MS.gene050076 | MS.gene39979 | 0.800832 | 1.20E-48 | -1.69E-46 |
| MS.gene050163 | MS.gene39979 | 0.820432 | 6.88E-53 | -1.69E-46 |
| MS.gene050165 | MS.gene39979 | 0.801933 | 7.13E-49 | -1.69E-46 |
| MS.gene050333 | MS.gene39979 | 0.803298 | 3.73E-49 | -1.69E-46 |
| MS.gene050397 | MS.gene39979 | 0.819343 | 1.22E-52 | -1.69E-46 |
| MS.gene050432 | MS.gene39979 | 0.852333 | 4.94E-61 | -1.69E-46 |
| MS.gene050518 | MS.gene39979 | 0.805552 | 1.26E-49 | -1.69E-46 |
| MS.gene050529 | MS.gene39979 | 0.809348 | 1.98E-50 | -1.69E-46 |
| MS.gene050538 | MS.gene39979 | 0.832179 | 1.10E-55 | -1.69E-46 |
| MS.gene050593 | MS.gene39979 | 0.87587 | 2.19E-68 | -1.69E-46 |
| MS.gene050670 | MS.gene39979 | 0.840219 | 9.92E-58 | -1.69E-46 |
| MS.gene050686 | MS.gene39979 | 0.811441 | 6.99E-51 | -1.69E-46 |
| MS.gene050747 | MS.gene39979 | 0.839009 | 2.05E-57 | -1.69E-46 |
| MS.gene050767 | MS.gene39979 | 0.836554 | 8.74E-57 | -1.69E-46 |
| MS.gene050770 | MS.gene39979 | 0.840799 | 6.99E-58 | -1.69E-46 |
| MS.gene050772 | MS.gene39979 | 0.87122 | 8.07E-67 | -1.69E-46 |
| MS.gene050812 | MS.gene39979 | 0.810852 | 9.38E-51 | -1.69E-46 |
| MS.gene050950 | MS.gene39979 | 0.836067 | 1.16E-56 | -1.69E-46 |
| MS.gene05100 | MS.gene39979 | 0.805756 | 1.14E-49 | -1.69E-46 |
| MS.gene05101 | MS.gene39979 | 0.822034 | 2.94E-53 | -1.69E-46 |
| MS.gene05105 | MS.gene39979 | 0.841369 | 4.95E-58 | -1.69E-46 |
| MS.gene051228 | MS.gene39979 | 0.830022 | 3.71E-55 | -1.69E-46 |
| MS.gene051387 | MS.gene39979 | 0.864243 | 1.40E-64 | -1.69E-46 |
| MS.gene051582 | MS.gene39979 | 0.813534 | 2.44E-51 | -1.69E-46 |
| MS.gene051666 | MS.gene39979 | 0.8965 | 3.47E-76 | -1.69E-46 |
| MS.gene051692 | MS.gene39979 | 0.868337 | 7.04E-66 | -1.69E-46 |
| MS.gene051694 | MS.gene39979 | 0.846249 | 2.45E-59 | -1.69E-46 |
| MS.gene051858 | MS.gene39979 | 0.834308 | 3.23E-56 | -1.69E-46 |
| MS.gene051877 | MS.gene39979 | 0.815939 | 7.15E-52 | -1.69E-46 |
| MS.gene052078 | MS.gene39979 | 0.82151 | 3.89E-53 | -1.69E-46 |
| MS.gene052271 | MS.gene39979 | 0.818472 | 1.93E-52 | -1.69E-46 |
| MS.gene052310 | MS.gene39979 | 0.854407 | 1.26E-61 | -1.69E-46 |
| MS.gene052322 | MS.gene39979 | 0.860017 | 2.77E-63 | -1.69E-46 |
| MS.gene052326 | MS.gene39979 | 0.805236 | 1.47E-49 | -1.69E-46 |
| MS.gene052379 | MS.gene39979 | 0.833565 | 4.96E-56 | -1.69E-46 |
| MS.gene052421 | MS.gene39979 | 0.8285 | 8.68E-55 | -1.69E-46 |
| MS.gene052481 | MS.gene39979 | 0.861896 | 7.43E-64 | -1.69E-46 |
| MS.gene052484 | MS.gene39979 | 0.862199 | 6.00E-64 | -1.69E-46 |
| MS.gene052485 | MS.gene39979 | 0.84169 | 4.08E-58 | -1.69E-46 |
| MS.gene052501 | MS.gene39979 | 0.80717 | 5.76E-50 | -1.69E-46 |
| MS.gene052508 | MS.gene39979 | 0.821732 | 3.45E-53 | -1.69E-46 |
| MS.gene052510 | MS.gene39979 | 0.830079 | 3.59E-55 | -1.69E-46 |
| MS.gene052615 | MS.gene39979 | 0.817632 | 2.98E-52 | -1.69E-46 |
| MS.gene052820 | MS.gene39979 | 0.809165 | 2.17E-50 | -1.69E-46 |
| MS.gene052822 | MS.gene39979 | 0.804035 | 2.62E-49 | -1.69E-46 |
| MS.gene052916 | MS.gene39979 | 0.80191 | 7.20E-49 | -1.69E-46 |
| MS.gene052982 | MS.gene39979 | 0.826487 | 2.64E-54 | -1.69E-46 |
| MS.gene053009 | MS.gene39979 | 0.808627 | 2.82E-50 | -1.69E-46 |
| MS.gene053103 | MS.gene39979 | 0.844128 | 9.16E-59 | -1.69E-46 |
| MS.gene053104 | MS.gene39979 | 0.877745 | 4.91E-69 | -1.69E-46 |
| MS.gene053107 | MS.gene39979 | 0.880552 | 5.00E-70 | -1.69E-46 |
| MS.gene053207 | MS.gene39979 | 0.849676 | 2.77E-60 | -1.69E-46 |
| MS.gene053209 | MS.gene39979 | 0.816173 | 6.34E-52 | -1.69E-46 |
| MS.gene053213 | MS.gene39979 | 0.860704 | 1.72E-63 | -1.69E-46 |
| MS.gene053286 | MS.gene39979 | 0.850128 | 2.07E-60 | -1.69E-46 |
| MS.gene053322 | MS.gene39979 | 0.878523 | 2.62E-69 | -1.69E-46 |
| MS.gene053449 | MS.gene39979 | 0.841225 | 5.41E-58 | -1.69E-46 |
| MS.gene053574 | MS.gene39979 | 0.827951 | 1.18E-54 | -1.69E-46 |
| MS.gene053579 | MS.gene39979 | 0.812092 | 5.05E-51 | -1.69E-46 |
| MS.gene053632 | MS.gene39979 | 0.810852 | 9.38E-51 | -1.69E-46 |
| MS.gene053813 | MS.gene39979 | 0.820154 | 7.97E-53 | -1.69E-46 |
| MS.gene053824 | MS.gene39979 | 0.803835 | 2.88E-49 | -1.69E-46 |
| MS.gene053916 | MS.gene39979 | 0.828962 | 6.72E-55 | -1.69E-46 |
| MS.gene054123 | MS.gene39979 | 0.815818 | 7.61E-52 | -1.69E-46 |
| MS.gene054376 | MS.gene39979 | 0.844028 | 9.74E-59 | -1.69E-46 |
| MS.gene054408 | MS.gene39979 | 0.801469 | 8.87E-49 | -1.69E-46 |
| MS.gene054600 | MS.gene39979 | 0.826253 | 3.00E-54 | -1.69E-46 |
| MS.gene054642 | MS.gene39979 | 0.854854 | 9.33E-62 | -1.69E-46 |
| MS.gene054802 | MS.gene39979 | 0.863123 | 3.12E-64 | -1.69E-46 |
| MS.gene054803 | MS.gene39979 | 0.856764 | 2.58E-62 | -1.69E-46 |
| MS.gene054804 | MS.gene39979 | 0.863535 | 2.32E-64 | -1.69E-46 |
| MS.gene054955 | MS.gene39979 | 0.826725 | 2.32E-54 | -1.69E-46 |
| MS.gene05505 | MS.gene39979 | 0.839805 | 1.27E-57 | -1.69E-46 |
| MS.gene055116 | MS.gene39979 | 0.832173 | 1.10E-55 | -1.69E-46 |
| MS.gene055206 | MS.gene39979 | 0.839085 | 1.96E-57 | -1.69E-46 |
| MS.gene055224 | MS.gene39979 | 0.822268 | 2.59E-53 | -1.69E-46 |
| MS.gene055277 | MS.gene39979 | 0.82902 | 6.50E-55 | -1.69E-46 |
| MS.gene055289 | MS.gene39979 | 0.846093 | 2.70E-59 | -1.69E-46 |
| MS.gene055362 | MS.gene39979 | 0.817241 | 3.65E-52 | -1.69E-46 |
| MS.gene055390 | MS.gene39979 | 0.809754 | 1.62E-50 | -1.69E-46 |
| MS.gene055397 | MS.gene39979 | 0.83599 | 1.22E-56 | -1.69E-46 |
| MS.gene055499 | MS.gene39979 | 0.855207 | 7.37E-62 | -1.69E-46 |
| MS.gene055502 | MS.gene39979 | 0.81822 | 2.20E-52 | -1.69E-46 |
| MS.gene055536 | MS.gene39979 | -0.800857 | 1.18E-48 | -1.69E-46 |
| MS.gene055564 | MS.gene39979 | 0.804646 | 1.96E-49 | -1.69E-46 |
| MS.gene055577 | MS.gene39979 | 0.846088 | 2.71E-59 | -1.69E-46 |
| MS.gene055636 | MS.gene39979 | 0.81059 | 1.07E-50 | -1.69E-46 |
| MS.gene055647 | MS.gene39979 | 0.843118 | 1.71E-58 | -1.69E-46 |
| MS.gene055722 | MS.gene39979 | 0.842801 | 2.07E-58 | -1.69E-46 |
| MS.gene055896 | MS.gene39979 | 0.807028 | 6.17E-50 | -1.69E-46 |
| MS.gene05592 | MS.gene39979 | 0.878465 | 2.75E-69 | -1.69E-46 |
| MS.gene055941 | MS.gene39979 | 0.828403 | 9.17E-55 | -1.69E-46 |
| MS.gene056083 | MS.gene39979 | 0.822461 | 2.34E-53 | -1.69E-46 |
| MS.gene056191 | MS.gene39979 | 0.810672 | 1.03E-50 | -1.69E-46 |
| MS.gene056374 | MS.gene39979 | 0.868497 | 6.25E-66 | -1.69E-46 |
| MS.gene056407 | MS.gene39979 | 0.847177 | 1.36E-59 | -1.69E-46 |
| MS.gene056410 | MS.gene39979 | 0.838664 | 2.51E-57 | -1.69E-46 |
| MS.gene056422 | MS.gene39979 | 0.800793 | 1.22E-48 | -1.69E-46 |
| MS.gene056511 | MS.gene39979 | 0.83483 | 2.39E-56 | -1.69E-46 |
| MS.gene056549 | MS.gene39979 | 0.808702 | 2.72E-50 | -1.69E-46 |
| MS.gene056609 | MS.gene39979 | 0.811706 | 6.12E-51 | -1.69E-46 |
| MS.gene05664 | MS.gene39979 | 0.832121 | 1.13E-55 | -1.69E-46 |
| MS.gene056657 | MS.gene39979 | 0.819643 | 1.04E-52 | -1.69E-46 |
| MS.gene05666 | MS.gene39979 | 0.81896 | 1.49E-52 | -1.69E-46 |
| MS.gene056796 | MS.gene39979 | 0.841438 | 4.75E-58 | -1.69E-46 |
| MS.gene056897 | MS.gene39979 | 0.835933 | 1.26E-56 | -1.69E-46 |
| MS.gene057011 | MS.gene39979 | 0.879698 | 1.01E-69 | -1.69E-46 |
| MS.gene05702 | MS.gene39979 | 0.801222 | 9.97E-49 | -1.69E-46 |
| MS.gene057123 | MS.gene39979 | 0.80016 | 1.64E-48 | -1.69E-46 |
| MS.gene057124 | MS.gene39979 | 0.834142 | 3.56E-56 | -1.69E-46 |
| MS.gene057129 | MS.gene39979 | 0.888361 | 6.32E-73 | -1.69E-46 |
| MS.gene057146 | MS.gene39979 | 0.842941 | 1.90E-58 | -1.69E-46 |
| MS.gene057285 | MS.gene39979 | 0.806904 | 6.56E-50 | -1.69E-46 |
| MS.gene057295 | MS.gene39979 | 0.841778 | 3.87E-58 | -1.69E-46 |
| MS.gene057331 | MS.gene39979 | 0.883148 | 5.73E-71 | -1.69E-46 |
| MS.gene05735 | MS.gene39979 | 0.828738 | 7.61E-55 | -1.69E-46 |
| MS.gene057416 | MS.gene39979 | 0.8832 | 5.49E-71 | -1.69E-46 |
| MS.gene057658 | MS.gene39979 | 0.802979 | 4.34E-49 | -1.69E-46 |
| MS.gene057734 | MS.gene39979 | 0.804171 | 2.46E-49 | -1.69E-46 |
| MS.gene057856 | MS.gene39979 | 0.813423 | 2.58E-51 | -1.69E-46 |
| MS.gene057926 | MS.gene39979 | 0.851178 | 1.05E-60 | -1.69E-46 |
| MS.gene057927 | MS.gene39979 | 0.801567 | 8.47E-49 | -1.69E-46 |
| MS.gene058006 | MS.gene39979 | 0.884006 | 2.77E-71 | -1.69E-46 |
| MS.gene058019 | MS.gene39979 | 0.874073 | 8.98E-68 | -1.69E-46 |
| MS.gene058233 | MS.gene39979 | 0.806734 | 7.12E-50 | -1.69E-46 |
| MS.gene058293 | MS.gene39979 | 0.878121 | 3.63E-69 | -1.69E-46 |
| MS.gene058323 | MS.gene39979 | 0.882403 | 1.07E-70 | -1.69E-46 |
| MS.gene058419 | MS.gene39979 | 0.835334 | 1.78E-56 | -1.69E-46 |
| MS.gene058544 | MS.gene39979 | 0.822285 | 2.57E-53 | -1.69E-46 |
| MS.gene058660 | MS.gene39979 | 0.866447 | 2.83E-65 | -1.69E-46 |
| MS.gene058723 | MS.gene39979 | 0.811216 | 7.82E-51 | -1.69E-46 |
| MS.gene058773 | MS.gene39979 | 0.811487 | 6.83E-51 | -1.69E-46 |
| MS.gene058787 | MS.gene39979 | 0.830541 | 2.77E-55 | -1.69E-46 |
| MS.gene058788 | MS.gene39979 | 0.819515 | 1.12E-52 | -1.69E-46 |
| MS.gene058838 | MS.gene39979 | 0.830669 | 2.58E-55 | -1.69E-46 |
| MS.gene05883 | MS.gene39979 | 0.820119 | 8.12E-53 | -1.69E-46 |
| MS.gene058993 | MS.gene39979 | 0.800685 | 1.28E-48 | -1.69E-46 |
| MS.gene059023 | MS.gene39979 | 0.806594 | 7.62E-50 | -1.69E-46 |
| MS.gene059029 | MS.gene39979 | 0.800128 | 1.67E-48 | -1.69E-46 |
| MS.gene05907 | MS.gene39979 | 0.828903 | 6.94E-55 | -1.69E-46 |
| MS.gene059326 | MS.gene39979 | 0.823573 | 1.29E-53 | -1.69E-46 |
| MS.gene05934 | MS.gene39979 | 0.857961 | 1.14E-62 | -1.69E-46 |
| MS.gene059536 | MS.gene39979 | 0.894406 | 2.54E-75 | -1.69E-46 |
| MS.gene059676 | MS.gene39979 | 0.850039 | 2.20E-60 | -1.69E-46 |
| MS.gene059677 | MS.gene39979 | 0.81249 | 4.13E-51 | -1.69E-46 |
| MS.gene059688 | MS.gene39979 | 0.84749 | 1.12E-59 | -1.69E-46 |
| MS.gene059692 | MS.gene39979 | 0.837625 | 4.65E-57 | -1.69E-46 |
| MS.gene059695 | MS.gene39979 | 0.841157 | 5.63E-58 | -1.69E-46 |
| MS.gene059708 | MS.gene39979 | 0.802915 | 4.47E-49 | -1.69E-46 |
| MS.gene059718 | MS.gene39979 | 0.832675 | 8.26E-56 | -1.69E-46 |
| MS.gene059801 | MS.gene39979 | 0.816479 | 5.41E-52 | -1.69E-46 |
| MS.gene059902 | MS.gene39979 | 0.835195 | 1.93E-56 | -1.69E-46 |
| MS.gene059960 | MS.gene39979 | 0.892464 | 1.55E-74 | -1.69E-46 |
| MS.gene060193 | MS.gene39979 | 0.904019 | 1.90E-79 | -1.69E-46 |
| MS.gene060403 | MS.gene39979 | 0.878186 | 3.44E-69 | -1.69E-46 |
| MS.gene060482 | MS.gene39979 | 0.816439 | 5.53E-52 | -1.69E-46 |
| MS.gene060762 | MS.gene39979 | 0.810338 | 1.21E-50 | -1.69E-46 |
| MS.gene060804 | MS.gene39979 | 0.883624 | 3.83E-71 | -1.69E-46 |
| MS.gene060818 | MS.gene39979 | 0.84804 | 7.90E-60 | -1.69E-46 |
| MS.gene060835 | MS.gene39979 | 0.841694 | 4.07E-58 | -1.69E-46 |
| MS.gene060837 | MS.gene39979 | 0.836438 | 9.36E-57 | -1.69E-46 |
| MS.gene06092 | MS.gene39979 | 0.872785 | 2.43E-67 | -1.69E-46 |
| MS.gene061041 | MS.gene39979 | 0.834538 | 2.83E-56 | -1.69E-46 |
| MS.gene061051 | MS.gene39979 | -0.839732 | 1.33E-57 | -1.69E-46 |
| MS.gene061150 | MS.gene39979 | 0.847199 | 1.35E-59 | -1.69E-46 |
| MS.gene061154 | MS.gene39979 | 0.806232 | 9.09E-50 | -1.69E-46 |
| MS.gene061200 | MS.gene39979 | 0.884514 | 1.80E-71 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39979.t1 | MTR_1g072170 | 98.092 | 262 | 5 | 0 | 1 | 262 | 1 | 262 | 0.0 | 513 |
| MS.gene39979.t1 | MTR_8g040070 | 36.872 | 179 | 111 | 1 | 81 | 259 | 84 | 260 | 4.20e-30 | 114 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39979.t1 | AT3G63190 | 64.727 | 275 | 84 | 5 | 1 | 262 | 1 | 275 | 6.66e-113 | 326 |
| MS.gene39979.t1 | AT3G01800 | 38.372 | 172 | 104 | 1 | 88 | 259 | 95 | 264 | 7.70e-30 | 113 |
Find 48 sgRNAs with CRISPR-Local
Find 329 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATCACTTCTCCATCGTTAT+TGG | 0.194025 | 1.4:+59158278 | None:intergenic |
| TCCTGATGCCAGTTCTCTTT+TGG | 0.231676 | 1.4:-59158692 | MS.gene39979:CDS |
| AGATTTGTCTAGCGATTTGC+AGG | 0.346351 | 1.4:-59156119 | MS.gene39979:intron |
| ATCACTTCTCCATCGTTATT+GGG | 0.347336 | 1.4:+59158279 | None:intergenic |
| ACATACCTTGATTTGTCATA+TGG | 0.356032 | 1.4:+59158664 | None:intergenic |
| ACATTATAGGTGGAATACTA+TGG | 0.360282 | 1.4:-59158754 | MS.gene39979:intron |
| AATTTCAGTTCTATAAGAAC+TGG | 0.378877 | 1.4:-59159738 | MS.gene39979:CDS |
| GGTTGTTGACATTTCATAGA+AGG | 0.388166 | 1.4:-59160045 | MS.gene39979:intron |
| GTGTGCAGAAAGAAGGGCTT+TGG | 0.399732 | 1.4:+59160147 | None:intergenic |
| GCAATGGTCTTCAAGCTAAC+TGG | 0.399998 | 1.4:+59158727 | None:intergenic |
| AGAAGGGCTTTGGGAACAAT+TGG | 0.409380 | 1.4:+59160157 | None:intergenic |
| ATGGAACGGAGTGGTGTTGT+TGG | 0.441029 | 1.4:+59160193 | None:intergenic |
| AAAGGACTCTTGACAATGTT+AGG | 0.447247 | 1.4:-59159764 | MS.gene39979:CDS |
| GCAGACACTCCCTTTCTAAA+GGG | 0.448929 | 1.4:-59160066 | MS.gene39979:CDS |
| AGCAGACACTCCCTTTCTAA+AGG | 0.450579 | 1.4:-59160067 | MS.gene39979:CDS |
| AGAGCGTTTGATGGTGAAAG+AGG | 0.456249 | 1.4:+59160123 | None:intergenic |
| CTATATGTCTTCAGAAAAGT+AGG | 0.473495 | 1.4:-59159791 | MS.gene39979:intron |
| ATAAGTTGAAGAGCGTTTGA+TGG | 0.483466 | 1.4:+59160114 | None:intergenic |
| AAGAGGAGTGTGCAGAAAGA+AGG | 0.485037 | 1.4:+59160140 | None:intergenic |
| TGGTGTTGTTGGAGAGAAAG+AGG | 0.488481 | 1.4:+59160204 | None:intergenic |
| ATGTCAACAACCCTTTAGAA+AGG | 0.489868 | 1.4:+59160056 | None:intergenic |
| GCTATAGTTAACTCTGATGT+TGG | 0.492221 | 1.4:-59158309 | MS.gene39979:CDS |
| ACCAAAAGAGAACTGGCATC+AGG | 0.497444 | 1.4:+59158691 | None:intergenic |
| TGTGCAGAAAGAAGGGCTTT+GGG | 0.498070 | 1.4:+59160148 | None:intergenic |
| TGGCGAGACCAAAAGAGAAC+TGG | 0.503386 | 1.4:+59158684 | None:intergenic |
| GTATCTAAACAAGTTGAAGA+AGG | 0.516666 | 1.4:-59156681 | MS.gene39979:CDS |
| TATGTCACTCTAAAGCTCTC+TGG | 0.520985 | 1.4:-59160094 | MS.gene39979:CDS |
| TCTCGCCATATGACAAATCA+AGG | 0.529141 | 1.4:-59158669 | MS.gene39979:intron |
| AGAGGAGTGTGCAGAAAGAA+GGG | 0.537281 | 1.4:+59160141 | None:intergenic |
| TTCAGAAAAGTAGGATGGAA+AGG | 0.539846 | 1.4:-59159782 | MS.gene39979:intron |
| GACTGATGATTATATAAAGA+AGG | 0.541481 | 1.4:-59155771 | MS.gene39979:CDS |
| CCTCTACAAACAGAAAGAAA+AGG | 0.543613 | 1.4:-59155741 | MS.gene39979:intron |
| TGTCAACAACCCTTTAGAAA+GGG | 0.543696 | 1.4:+59160057 | None:intergenic |
| ATCCATGCTTGACAAAATTG+AGG | 0.567671 | 1.4:-59159703 | MS.gene39979:intron |
| TATCTAAACAAGTTGAAGAA+GGG | 0.569824 | 1.4:-59156680 | MS.gene39979:CDS |
| AGGAGTGCTTATTTGAGCAA+TGG | 0.572944 | 1.4:+59158711 | None:intergenic |
| GGGCTTTGGGAACAATTGGA+AGG | 0.573894 | 1.4:+59160161 | None:intergenic |
| CTCAGTTGACATCTGATAGA+CGG | 0.584774 | 1.4:-59158242 | MS.gene39979:CDS |
| ATGTCTTCAGAAAAGTAGGA+TGG | 0.586348 | 1.4:-59159787 | MS.gene39979:intron |
| GTCTATCAGATGTCAACTGA+GGG | 0.592082 | 1.4:+59158244 | None:intergenic |
| TAAACAAGTTGAAGAAGGGA+AGG | 0.593128 | 1.4:-59156676 | MS.gene39979:intron |
| ACCCAGAAAGGGATTTGTGA+GGG | 0.603850 | 1.4:-59159938 | MS.gene39979:intron |
| ATTTCAGTTCTATAAGAACT+GGG | 0.614614 | 1.4:-59159737 | MS.gene39979:CDS |
| ATAACGATGGAGAAGTGATA+CGG | 0.620411 | 1.4:-59158275 | MS.gene39979:CDS |
| CGTCTATCAGATGTCAACTG+AGG | 0.647000 | 1.4:+59158243 | None:intergenic |
| GTTGACATCTGATAGACGGA+AGG | 0.650277 | 1.4:-59158238 | MS.gene39979:intron |
| TACCCAGAAAGGGATTTGTG+AGG | 0.662137 | 1.4:-59159939 | MS.gene39979:intron |
| GGTATGACTCCCAATAACGA+TGG | 0.693482 | 1.4:-59158288 | MS.gene39979:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTAATATAGTGATAATTT+TGG | + | chr1.4:59154681-59154700 | None:intergenic | 10.0% |
| !!! | TTTTGATGTAAAAATTATAT+TGG | + | chr1.4:59159794-59159813 | None:intergenic | 10.0% |
| !! | AAAATAAAACTAAAAACGTA+TGG | + | chr1.4:59155887-59155906 | None:intergenic | 15.0% |
| !! | AAAATCACTAGAAATAAATT+TGG | + | chr1.4:59160145-59160164 | None:intergenic | 15.0% |
| !! | AAATCACTAGAAATAAATTT+GGG | + | chr1.4:59160144-59160163 | None:intergenic | 15.0% |
| !! | AACTTAAAAGAATATAGAAA+AGG | - | chr1.4:59157726-59157745 | MS.gene39979:intron | 15.0% |
| !! | TGAATTAACTATTTACTTAT+TGG | - | chr1.4:59159092-59159111 | MS.gene39979:intron | 15.0% |
| !! | TTTGTACATATGTATATTAA+GGG | - | chr1.4:59160163-59160182 | MS.gene39979:CDS | 15.0% |
| !!! | AACAAATTCTAAGAAAATTA+CGG | - | chr1.4:59155639-59155658 | MS.gene39979:intron | 15.0% |
| !!! | ATGAATAATTTAATTTTGCT+AGG | + | chr1.4:59160087-59160106 | None:intergenic | 15.0% |
| !!! | TTTTATGTATATATGAATGT+GGG | - | chr1.4:59154865-59154884 | MS.gene39979:intron | 15.0% |
| !!! | TTTTATTTTTTCTAGAGAAT+CGG | - | chr1.4:59155898-59155917 | MS.gene39979:intron | 15.0% |
| !!! | TTTTGTACATATGTATATTA+AGG | - | chr1.4:59160162-59160181 | MS.gene39979:CDS | 15.0% |
| !!! | TTTTTATGTATATATGAATG+TGG | - | chr1.4:59154864-59154883 | MS.gene39979:intron | 15.0% |
| !! | AAAAGCAAAAGTTATCAATT+TGG | + | chr1.4:59155773-59155792 | None:intergenic | 20.0% |
| !! | ATAAACCATAAAGAATGAAA+TGG | - | chr1.4:59156073-59156092 | MS.gene39979:intron | 20.0% |
| !! | ATACTTTCTTTCACTTTATT+TGG | - | chr1.4:59155219-59155238 | MS.gene39979:intron | 20.0% |
| !! | ATCTTAACAACTATATATAC+AGG | - | chr1.4:59156702-59156721 | MS.gene39979:intron | 20.0% |
| !! | ATTAATTAGATGCTTAAACA+TGG | - | chr1.4:59159033-59159052 | MS.gene39979:intron | 20.0% |
| !! | ATTCACCAATAAAAACAAAA+GGG | + | chr1.4:59158666-59158685 | None:intergenic | 20.0% |
| !! | ATTTATACAAGAAAGACAAT+AGG | - | chr1.4:59157649-59157668 | MS.gene39979:intron | 20.0% |
| !! | CTACTATTGTTTATTAGTAA+CGG | + | chr1.4:59155545-59155564 | None:intergenic | 20.0% |
| !! | TATCAACAAACAAGAAATTA+TGG | - | chr1.4:59160037-59160056 | MS.gene39979:intron | 20.0% |
| !! | TCTTAACAACTATATATACA+GGG | - | chr1.4:59156703-59156722 | MS.gene39979:intron | 20.0% |
| !! | TGTGATTAAATGTGTATATA+TGG | - | chr1.4:59156290-59156309 | MS.gene39979:CDS | 20.0% |
| !! | TTACACATTTAGATTAACTT+TGG | - | chr1.4:59159484-59159503 | MS.gene39979:intron | 20.0% |
| !! | TTAGTTATACATGAATTATG+TGG | - | chr1.4:59157889-59157908 | MS.gene39979:intron | 20.0% |
| !! | TTAGTTTCTATTTATTTGAG+AGG | + | chr1.4:59159212-59159231 | None:intergenic | 20.0% |
| !! | TTATACTAAGTAGTATATCA+AGG | + | chr1.4:59155323-59155342 | None:intergenic | 20.0% |
| !! | TTTATGTATATATGAATGTG+GGG | - | chr1.4:59154866-59154885 | MS.gene39979:intron | 20.0% |
| !!! | GATTGGTTCTTATTATAATT+TGG | - | chr1.4:59154724-59154743 | MS.gene39979:intron | 20.0% |
| !!! | GCTGTATATAAAGTAATTTT+AGG | - | chr1.4:59156589-59156608 | MS.gene39979:intron | 20.0% |
| !!! | TACAAGATTCTTAGTTTTTT+GGG | - | chr1.4:59159274-59159293 | MS.gene39979:intron | 20.0% |
| !!! | TTACAAGATTCTTAGTTTTT+TGG | - | chr1.4:59159273-59159292 | MS.gene39979:intron | 20.0% |
| !!! | TTCACAAAACTATTTTTCTA+TGG | - | chr1.4:59159062-59159081 | MS.gene39979:intron | 20.0% |
| !!! | TTGTTGTTGTATTTCATTAT+TGG | - | chr1.4:59158837-59158856 | MS.gene39979:intron | 20.0% |
| !!! | TTTCAGTGTTTGTTAAATAA+TGG | - | chr1.4:59155247-59155266 | MS.gene39979:intron | 20.0% |
| !!! | TTTTGTTTTTATTGGTGAAT+GGG | - | chr1.4:59158666-59158685 | MS.gene39979:intron | 20.0% |
| ! | AAAAACAATCAATGAGAAAG+GGG | - | chr1.4:59157778-59157797 | MS.gene39979:intron | 25.0% |
| ! | AAAAATTATATTGGAAGCCT+TGG | + | chr1.4:59159785-59159804 | None:intergenic | 25.0% |
| ! | AAATGTGTAAATGAATTCAG+AGG | + | chr1.4:59159474-59159493 | None:intergenic | 25.0% |
| ! | AACTAACCATTTAAATGACA+TGG | + | chr1.4:59157875-59157894 | None:intergenic | 25.0% |
| ! | AAGTTGTTTGTAACTTTCTT+TGG | - | chr1.4:59158335-59158354 | MS.gene39979:intron | 25.0% |
| ! | AATGACATGGTTTCAAAAAA+AGG | + | chr1.4:59157862-59157881 | None:intergenic | 25.0% |
| ! | AATGATGTTTCATTTGAACA+TGG | - | chr1.4:59159428-59159447 | MS.gene39979:intron | 25.0% |
| ! | AATTTCAGTTCTATAAGAAC+TGG | - | chr1.4:59154960-59154979 | MS.gene39979:intron | 25.0% |
| ! | ACAAAAACAATCAATGAGAA+AGG | - | chr1.4:59157776-59157795 | MS.gene39979:intron | 25.0% |
| ! | ACAAGGAATAAATTACTGAA+GGG | + | chr1.4:59158485-59158504 | None:intergenic | 25.0% |
| ! | ACGCACTTGAATAATTTAAA+TGG | - | chr1.4:59156657-59156676 | MS.gene39979:intron | 25.0% |
| ! | AGCTTATGAAAAACTTGAAA+AGG | - | chr1.4:59158423-59158442 | MS.gene39979:intron | 25.0% |
| ! | AGTATTTGTATCATTCCATA+CGG | - | chr1.4:59156221-59156240 | MS.gene39979:intron | 25.0% |
| ! | ATTCTTCAAAATTCAAAGAC+TGG | + | chr1.4:59159579-59159598 | None:intergenic | 25.0% |
| ! | ATTTCAGTTCTATAAGAACT+GGG | - | chr1.4:59154961-59154980 | MS.gene39979:intron | 25.0% |
| ! | CAAAAACAATCAATGAGAAA+GGG | - | chr1.4:59157777-59157796 | MS.gene39979:intron | 25.0% |
| ! | CATTCACCAATAAAAACAAA+AGG | + | chr1.4:59158667-59158686 | None:intergenic | 25.0% |
| ! | CGTTACTAATAAACAATAGT+AGG | - | chr1.4:59155543-59155562 | MS.gene39979:intron | 25.0% |
| ! | CTTAACAACTATATATACAG+GGG | - | chr1.4:59156704-59156723 | MS.gene39979:intron | 25.0% |
| ! | CTTATCCATTTCATTCTTTA+TGG | + | chr1.4:59156081-59156100 | None:intergenic | 25.0% |
| ! | GACTGATGATTATATAAAGA+AGG | - | chr1.4:59158927-59158946 | MS.gene39979:intron | 25.0% |
| ! | GTAAATAGTTAATTCAAACC+AGG | + | chr1.4:59159088-59159107 | None:intergenic | 25.0% |
| ! | TAAACATATAGCATTTCATG+TGG | + | chr1.4:59159862-59159881 | None:intergenic | 25.0% |
| ! | TAACAGATAAACATATCAAG+TGG | + | chr1.4:59158995-59159014 | None:intergenic | 25.0% |
| ! | TACCAAAGAAAAACCTTATT+GGG | - | chr1.4:59157147-59157166 | MS.gene39979:intron | 25.0% |
| ! | TACTTTATATACAGCATCAA+TGG | + | chr1.4:59156584-59156603 | None:intergenic | 25.0% |
| ! | TGTATTTCATTATTGGTCAA+TGG | - | chr1.4:59158844-59158863 | MS.gene39979:intron | 25.0% |
| ! | TTACCAAAGAAAAACCTTAT+TGG | - | chr1.4:59157146-59157165 | MS.gene39979:intron | 25.0% |
| ! | TTATTGTATACTTCTATGTG+TGG | - | chr1.4:59156127-59156146 | MS.gene39979:CDS | 25.0% |
| !! | AAATGAGTATTGCATTGTAA+TGG | - | chr1.4:59155073-59155092 | MS.gene39979:intron | 25.0% |
| !! | AAATTCCAACAGAATTGTTT+TGG | - | chr1.4:59157826-59157845 | MS.gene39979:intron | 25.0% |
| !! | ATTTTCTACCAGAGAATATA+GGG | + | chr1.4:59157194-59157213 | None:intergenic | 25.0% |
| !! | TATCTAAACAAGTTGAAGAA+GGG | - | chr1.4:59158018-59158037 | MS.gene39979:intron | 25.0% |
| !! | TATGTTTTGTCATAATGAAC+TGG | - | chr1.4:59158069-59158088 | MS.gene39979:intron | 25.0% |
| !! | TATTAGATTTAGAACCGTAT+TGG | + | chr1.4:59159324-59159343 | None:intergenic | 25.0% |
| !! | TATTTTCTACCAGAGAATAT+AGG | + | chr1.4:59157195-59157214 | None:intergenic | 25.0% |
| !! | TATTTTGCTACTAATCTTGA+GGG | + | chr1.4:59156745-59156764 | None:intergenic | 25.0% |
| !! | TGTAGTGTCTAGATTATTTT+AGG | - | chr1.4:59156505-59156524 | MS.gene39979:intron | 25.0% |
| !! | TTCTTTCACTTTATTTGGAT+TGG | - | chr1.4:59155224-59155243 | MS.gene39979:intron | 25.0% |
| !! | TTGAAACCATGTCATTTAAA+TGG | - | chr1.4:59157866-59157885 | MS.gene39979:intron | 25.0% |
| !! | TTTATTCTAGAAGCATATTG+TGG | + | chr1.4:59158299-59158318 | None:intergenic | 25.0% |
| !!! | ACAAGATTCTTAGTTTTTTG+GGG | - | chr1.4:59159275-59159294 | MS.gene39979:intron | 25.0% |
| !!! | ATTTGGTAATGAAAGTAAAG+TGG | - | chr1.4:59157386-59157405 | MS.gene39979:intron | 25.0% |
| !!! | CTTTTGTTTTTATTGGTGAA+TGG | - | chr1.4:59158665-59158684 | MS.gene39979:intron | 25.0% |
| !!! | GATAACTTTTGCTTTTATTG+TGG | - | chr1.4:59155777-59155796 | MS.gene39979:CDS | 25.0% |
| !!! | GTGATTAATGAAAGGTATTA+CGG | + | chr1.4:59158511-59158530 | None:intergenic | 25.0% |
| !!! | TGCTTCTAGAATAAATGTTT+TGG | - | chr1.4:59158304-59158323 | MS.gene39979:CDS | 25.0% |
| !!! | TTATTTTGCTACTAATCTTG+AGG | + | chr1.4:59156746-59156765 | None:intergenic | 25.0% |
| !!! | TTTTGAAAAATACCCAGAAA+GGG | - | chr1.4:59154749-59154768 | MS.gene39979:intron | 25.0% |
| !!! | TTTTTGAAAAATACCCAGAA+AGG | - | chr1.4:59154748-59154767 | MS.gene39979:intron | 25.0% |
| AAAACAATCAATGAGAAAGG+GGG | - | chr1.4:59157779-59157798 | MS.gene39979:intron | 30.0% | |
| AAACCAAAGACTAAATGCAT+AGG | + | chr1.4:59156998-59157017 | None:intergenic | 30.0% | |
| AAGCATATATAAGCTATCTG+AGG | - | chr1.4:59156861-59156880 | MS.gene39979:intron | 30.0% | |
| AATAGTAGGACAAAACTTAG+GGG | - | chr1.4:59155557-59155576 | MS.gene39979:intron | 30.0% | |
| ACAACAACAAATTATCCTCA+CGG | + | chr1.4:59158827-59158846 | None:intergenic | 30.0% | |
| ACAATAGTAGGACAAAACTT+AGG | - | chr1.4:59155555-59155574 | MS.gene39979:intron | 30.0% | |
| ACATTATAGGTGGAATACTA+TGG | - | chr1.4:59155944-59155963 | MS.gene39979:intron | 30.0% | |
| ACCAAATCTCATTGATACAA+GGG | + | chr1.4:59157373-59157392 | None:intergenic | 30.0% | |
| ACTTTCTATGCATTATGTTC+TGG | - | chr1.4:59159381-59159400 | MS.gene39979:intron | 30.0% | |
| ATACTATCTTTGTTAGTTCC+TGG | + | chr1.4:59158001-59158020 | None:intergenic | 30.0% | |
| ATCTTCAATAAACCCTTACA+AGG | + | chr1.4:59156888-59156907 | None:intergenic | 30.0% | |
| ATGTCGCAAAATTTAATGGA+GGG | - | chr1.4:59159893-59159912 | MS.gene39979:CDS | 30.0% | |
| CAATAAAAACAAAAGGGAGA+TGG | + | chr1.4:59158660-59158679 | None:intergenic | 30.0% | |
| CAATAGTAGGACAAAACTTA+GGG | - | chr1.4:59155556-59155575 | MS.gene39979:intron | 30.0% | |
| CTAAGAAAATTACGGATTTG+AGG | - | chr1.4:59155647-59155666 | MS.gene39979:intron | 30.0% | |
| CTACAATTGACAATGTTGAT+TGG | - | chr1.4:59155472-59155491 | MS.gene39979:intron | 30.0% | |
| CTATATGTCTTCAGAAAAGT+AGG | - | chr1.4:59154907-59154926 | MS.gene39979:intron | 30.0% | |
| CTGTTTCATAACATTATAGG+TGG | - | chr1.4:59155934-59155953 | MS.gene39979:intron | 30.0% | |
| CTTGTTTATTGCCAATTTGA+GGG | - | chr1.4:59158094-59158113 | MS.gene39979:intron | 30.0% | |
| GAAAGAAAGGTAAACAATGA+AGG | + | chr1.4:59158456-59158475 | None:intergenic | 30.0% | |
| GAACAACACAAAAATACCTA+AGG | - | chr1.4:59155703-59155722 | MS.gene39979:intron | 30.0% | |
| GACAAGGAATAAATTACTGA+AGG | + | chr1.4:59158486-59158505 | None:intergenic | 30.0% | |
| GGGACAATATACTGTAAAAT+GGG | - | chr1.4:59158686-59158705 | MS.gene39979:CDS | 30.0% | |
| TACCAAATCTCATTGATACA+AGG | + | chr1.4:59157374-59157393 | None:intergenic | 30.0% | |
| TACCTTTCATTAATCACTGT+TGG | - | chr1.4:59158514-59158533 | MS.gene39979:intron | 30.0% | |
| TACTAACACGTAACAATTTC+AGG | - | chr1.4:59159923-59159942 | MS.gene39979:CDS | 30.0% | |
| TAGCAAAGAAATAAGTTCCA+AGG | + | chr1.4:59158129-59158148 | None:intergenic | 30.0% | |
| TGAATGTCTAAACGAATATG+TGG | - | chr1.4:59157919-59157938 | MS.gene39979:intron | 30.0% | |
| TGATACCAAAACAATTCTGT+TGG | + | chr1.4:59157834-59157853 | None:intergenic | 30.0% | |
| TGATATGCCACATAAAATTG+TGG | + | chr1.4:59159739-59159758 | None:intergenic | 30.0% | |
| TGGGACAATATACTGTAAAA+TGG | - | chr1.4:59158685-59158704 | MS.gene39979:CDS | 30.0% | |
| TTAGAGAAAAATATCCTTCC+AGG | + | chr1.4:59156957-59156976 | None:intergenic | 30.0% | |
| TTCATTTGAACATGGTATAG+TGG | - | chr1.4:59159436-59159455 | MS.gene39979:intron | 30.0% | |
| TTCCAACAGTGATTAATGAA+AGG | + | chr1.4:59158519-59158538 | None:intergenic | 30.0% | |
| TTCTGAACTACTTCATTGAT+TGG | - | chr1.4:59154707-59154726 | MS.gene39979:intron | 30.0% | |
| TTGTAATGCATCAGTCAAAA+AGG | - | chr1.4:59159619-59159638 | MS.gene39979:intron | 30.0% | |
| TTGTACTAAGTAGTGTATCA+TGG | + | chr1.4:59155391-59155410 | None:intergenic | 30.0% | |
| ! | ATGTTCACTTCTTTTATAGG+TGG | - | chr1.4:59158369-59158388 | MS.gene39979:intron | 30.0% |
| ! | CGAAGATTTATATCCTTTTG+TGG | - | chr1.4:59160009-59160028 | MS.gene39979:intron | 30.0% |
| ! | CTTTTCTTTCTGTTTGTAGA+GGG | + | chr1.4:59158959-59158978 | None:intergenic | 30.0% |
| ! | GAGCTGTTTCATAACATTAT+AGG | - | chr1.4:59155931-59155950 | MS.gene39979:intron | 30.0% |
| ! | GATATCAATTTTCAGCTTGA+AGG | - | chr1.4:59156355-59156374 | MS.gene39979:intron | 30.0% |
| ! | GATTTATATCCTTTTGTGGA+TGG | - | chr1.4:59160013-59160032 | MS.gene39979:intron | 30.0% |
| ! | GTATCTAAACAAGTTGAAGA+AGG | - | chr1.4:59158017-59158036 | MS.gene39979:intron | 30.0% |
| ! | TCTTGTTTATTGCCAATTTG+AGG | - | chr1.4:59158093-59158112 | MS.gene39979:intron | 30.0% |
| ! | TTTCCTATGCATTTAGTCTT+TGG | - | chr1.4:59156992-59157011 | MS.gene39979:intron | 30.0% |
| !! | AAAACTATTTTTCTATGGCC+TGG | - | chr1.4:59159067-59159086 | MS.gene39979:intron | 30.0% |
| !! | ACATACCTTGATTTGTCATA+TGG | + | chr1.4:59156037-59156056 | None:intergenic | 30.0% |
| !! | TGTTCTAAAGTCAGATCAAT+TGG | - | chr1.4:59155107-59155126 | MS.gene39979:intron | 30.0% |
| !!! | AAGATTCTTAGTTTTTTGGG+GGG | - | chr1.4:59159277-59159296 | MS.gene39979:intron | 30.0% |
| !!! | AATTGGAAGGTTTTGAAAGA+TGG | + | chr1.4:59154527-59154546 | None:intergenic | 30.0% |
| !!! | ATGCTTCCAGTTTTTAAGAT+GGG | - | chr1.4:59157500-59157519 | MS.gene39979:intron | 30.0% |
| !!! | ATTTTTTGTTTCTCCTTTCC+AGG | - | chr1.4:59157980-59157999 | MS.gene39979:intron | 30.0% |
| !!! | CAAGATTCTTAGTTTTTTGG+GGG | - | chr1.4:59159276-59159295 | MS.gene39979:intron | 30.0% |
| !!! | CATCTCCCTTTTGTTTTTAT+TGG | - | chr1.4:59158658-59158677 | MS.gene39979:intron | 30.0% |
| AAACCGTACAAATCATAACG+AGG | + | chr1.4:59156156-59156175 | None:intergenic | 35.0% | |
| AAAGGACTCTTGACAATGTT+AGG | - | chr1.4:59154934-59154953 | MS.gene39979:intron | 35.0% | |
| AAATAGCGTCTATATCGTAG+CGG | - | chr1.4:59155420-59155439 | MS.gene39979:intron | 35.0% | |
| AAATCTCATTGATACAAGGG+TGG | + | chr1.4:59157370-59157389 | None:intergenic | 35.0% | |
| AACATGGTATAGTGGCTAAA+AGG | - | chr1.4:59159444-59159463 | MS.gene39979:intron | 35.0% | |
| AAGGAATTCCCTATATTCTC+TGG | - | chr1.4:59157183-59157202 | MS.gene39979:intron | 35.0% | |
| AATAATTCTGAGTGAGCTCT+TGG | - | chr1.4:59156327-59156346 | MS.gene39979:intron | 35.0% | |
| AATCGCACATACTTACACAA+TGG | - | chr1.4:59155803-59155822 | MS.gene39979:intron | 35.0% | |
| AATTCTGTTGGAATTTGACC+TGG | + | chr1.4:59157822-59157841 | None:intergenic | 35.0% | |
| ACAACACGTAAAAACACCTA+AGG | + | chr1.4:59155588-59155607 | None:intergenic | 35.0% | |
| ACATTGTCAATTGTAGATCG+CGG | + | chr1.4:59155468-59155487 | None:intergenic | 35.0% | |
| ACCCTTGTATCAATGAGATT+TGG | - | chr1.4:59157369-59157388 | MS.gene39979:intron | 35.0% | |
| AGTTTCCATAGAAAGTTCAG+CGG | + | chr1.4:59157710-59157729 | None:intergenic | 35.0% | |
| ATAACGATGGAGAAGTGATA+CGG | - | chr1.4:59156423-59156442 | MS.gene39979:intron | 35.0% | |
| ATCACTTCTCCATCGTTATT+GGG | + | chr1.4:59156422-59156441 | None:intergenic | 35.0% | |
| ATCCATGCTTGACAAAATTG+AGG | - | chr1.4:59154995-59155014 | MS.gene39979:intron | 35.0% | |
| ATCTTTGTTAGTTCCTGGAA+AGG | + | chr1.4:59157996-59158015 | None:intergenic | 35.0% | |
| ATGTCTTCAGAAAAGTAGGA+TGG | - | chr1.4:59154911-59154930 | MS.gene39979:intron | 35.0% | |
| CATGTCGCAAAATTTAATGG+AGG | - | chr1.4:59159892-59159911 | MS.gene39979:CDS | 35.0% | |
| CCTCTACAAACAGAAAGAAA+AGG | - | chr1.4:59158957-59158976 | MS.gene39979:intron | 35.0% | |
| GAAAATTCACACTGATGACT+AGG | + | chr1.4:59158805-59158824 | None:intergenic | 35.0% | |
| GACTAATATACACAGCTCAA+TGG | + | chr1.4:59156191-59156210 | None:intergenic | 35.0% | |
| GAGCAGTTTGTAATGACAAT+TGG | + | chr1.4:59155748-59155767 | None:intergenic | 35.0% | |
| GCTATAGTTAACTCTGATGT+TGG | - | chr1.4:59156389-59156408 | MS.gene39979:intron | 35.0% | |
| GGTTGTTGACATTTCATAGA+AGG | - | chr1.4:59154653-59154672 | MS.gene39979:intron | 35.0% | |
| GTAATTTCTCCCTTTCTTTC+AGG | - | chr1.4:59160194-59160213 | MS.gene39979:CDS | 35.0% | |
| GTTCTTATTGTAAGCTAGAC+CGG | + | chr1.4:59157330-59157349 | None:intergenic | 35.0% | |
| TAACTTTCTTTGGACTGCTT+TGG | - | chr1.4:59158345-59158364 | MS.gene39979:intron | 35.0% | |
| TACGGATTTGAGGAAATCAT+GGG | - | chr1.4:59155657-59155676 | MS.gene39979:intron | 35.0% | |
| TAGTGATGTGACATTGATGT+GGG | - | chr1.4:59159834-59159853 | MS.gene39979:intron | 35.0% | |
| TATCACTTCTCCATCGTTAT+TGG | + | chr1.4:59156423-59156442 | None:intergenic | 35.0% | |
| TCAAATCTCCATCAAGTCAA+AGG | + | chr1.4:59159512-59159531 | None:intergenic | 35.0% | |
| TGAAGGGAGTTAAGAAAGAA+AGG | + | chr1.4:59158469-59158488 | None:intergenic | 35.0% | |
| TGATGGAGATTTGAGTGAAT+AGG | - | chr1.4:59159518-59159537 | MS.gene39979:intron | 35.0% | |
| TGCATTTAATGTCAACTCCA+AGG | - | chr1.4:59159765-59159784 | MS.gene39979:CDS | 35.0% | |
| TGCCATGTCGCAAAATTTAA+TGG | - | chr1.4:59159889-59159908 | MS.gene39979:CDS | 35.0% | |
| TGGTATGATCAGACATACAT+TGG | + | chr1.4:59155512-59155531 | None:intergenic | 35.0% | |
| TGTAGAAGAATGTCTCAGAT+GGG | + | chr1.4:59156248-59156267 | None:intergenic | 35.0% | |
| TGTTGATATCCATCCACAAA+AGG | + | chr1.4:59160025-59160044 | None:intergenic | 35.0% | |
| TTACGGATTTGAGGAAATCA+TGG | - | chr1.4:59155656-59155675 | MS.gene39979:intron | 35.0% | |
| TTAGTAACGGTAAAGAGCAA+TGG | + | chr1.4:59155532-59155551 | None:intergenic | 35.0% | |
| TTATGAAACAGCTCATCTAC+AGG | + | chr1.4:59155925-59155944 | None:intergenic | 35.0% | |
| TTCAGAAAAGTAGGATGGAA+AGG | - | chr1.4:59154916-59154935 | MS.gene39979:intron | 35.0% | |
| TTGTAGAAGAATGTCTCAGA+TGG | + | chr1.4:59156249-59156268 | None:intergenic | 35.0% | |
| ! | AATTTTGTCAAGCATGGATG+GGG | + | chr1.4:59154994-59155013 | None:intergenic | 35.0% |
| ! | AGCCCAATAAGGTTTTTCTT+TGG | + | chr1.4:59157152-59157171 | None:intergenic | 35.0% |
| ! | ATGTCAACAACCCTTTAGAA+AGG | + | chr1.4:59154645-59154664 | None:intergenic | 35.0% |
| ! | CAAGTTTTCAGTCGATTGTT+AGG | + | chr1.4:59157429-59157448 | None:intergenic | 35.0% |
| ! | CAATTTTGTCAAGCATGGAT+GGG | + | chr1.4:59154995-59155014 | None:intergenic | 35.0% |
| ! | CACATAAAATTGTGGTGATG+TGG | + | chr1.4:59159731-59159750 | None:intergenic | 35.0% |
| ! | CACATCACCACAATTTTATG+TGG | - | chr1.4:59159729-59159748 | MS.gene39979:CDS | 35.0% |
| ! | CATCCTCGTTATGATTTGTA+CGG | - | chr1.4:59156150-59156169 | MS.gene39979:CDS | 35.0% |
| ! | CCTTTTCTTTCTGTTTGTAG+AGG | + | chr1.4:59158960-59158979 | None:intergenic | 35.0% |
| ! | CTCCATTAAATTTTGCGACA+TGG | + | chr1.4:59159894-59159913 | None:intergenic | 35.0% |
| ! | GAAAAGTTTCAAGGTATTCC+AGG | - | chr1.4:59157801-59157820 | MS.gene39979:intron | 35.0% |
| ! | GGCATGTTCACTTCTTTTAT+AGG | - | chr1.4:59158366-59158385 | MS.gene39979:intron | 35.0% |
| ! | TAAACAAGTTGAAGAAGGGA+AGG | - | chr1.4:59158022-59158041 | MS.gene39979:intron | 35.0% |
| ! | TACCTCAATTTTGTCAAGCA+TGG | + | chr1.4:59155000-59155019 | None:intergenic | 35.0% |
| ! | TCAATTTTGTCAAGCATGGA+TGG | + | chr1.4:59154996-59155015 | None:intergenic | 35.0% |
| ! | TGTCAACAACCCTTTAGAAA+GGG | + | chr1.4:59154644-59154663 | None:intergenic | 35.0% |
| ! | TTATCACAAGCGAGCTTTAT+AGG | - | chr1.4:59157042-59157061 | MS.gene39979:intron | 35.0% |
| !! | ATAAGTTGAAGAGCGTTTGA+TGG | + | chr1.4:59154587-59154606 | None:intergenic | 35.0% |
| !! | CATGATCACTTTTCATTGCA+TGG | - | chr1.4:59155160-59155179 | MS.gene39979:intron | 35.0% |
| !! | CATGCTTCCAGTTTTTAAGA+TGG | - | chr1.4:59157499-59157518 | MS.gene39979:intron | 35.0% |
| !! | GCATTTAGTCTTTGGTTTGA+AGG | - | chr1.4:59157000-59157019 | MS.gene39979:intron | 35.0% |
| !! | GTTTTATTCAGAAACCTGCA+TGG | - | chr1.4:59157282-59157301 | MS.gene39979:intron | 35.0% |
| !! | TTCTTTTATAGGTGGCTTTG+AGG | - | chr1.4:59158377-59158396 | MS.gene39979:intron | 35.0% |
| !!! | GAAGGTTTTGAAAGATGGAA+CGG | + | chr1.4:59154522-59154541 | None:intergenic | 35.0% |
| !!! | TACTGATTTTGCTCCTAATC+TGG | + | chr1.4:59157686-59157705 | None:intergenic | 35.0% |
| !!! | TCCAGTTTTTAAGATGGGTA+GGG | - | chr1.4:59157505-59157524 | MS.gene39979:intron | 35.0% |
| !!! | TTCCAGTTTTTAAGATGGGT+AGG | - | chr1.4:59157504-59157523 | MS.gene39979:intron | 35.0% |
| ACCTAAGGAAATGCACCTAT+GGG | - | chr1.4:59155718-59155737 | MS.gene39979:intron | 40.0% | |
| AGAAAGGGGGAAAAGTTTCA+AGG | - | chr1.4:59157792-59157811 | MS.gene39979:intron | 40.0% | |
| AGATGATATCGCCTTAGACT+TGG | - | chr1.4:59157214-59157233 | MS.gene39979:intron | 40.0% | |
| AGATTTGTCTAGCGATTTGC+AGG | - | chr1.4:59158579-59158598 | MS.gene39979:intron | 40.0% | |
| AGTATCCGCTGAACTTTCTA+TGG | - | chr1.4:59157702-59157721 | MS.gene39979:intron | 40.0% | |
| ATGACAATTGGATGTCCCAT+AGG | + | chr1.4:59155736-59155755 | None:intergenic | 40.0% | |
| CAATGCAGTATAGTCTTTGG+GGG | + | chr1.4:59157259-59157278 | None:intergenic | 40.0% | |
| CACTGAAATTGGGTCCAATA+CGG | - | chr1.4:59159307-59159326 | MS.gene39979:intron | 40.0% | |
| CCAATGCAGTATAGTCTTTG+GGG | + | chr1.4:59157260-59157279 | None:intergenic | 40.0% | |
| CTAGTGATGTGACATTGATG+TGG | - | chr1.4:59159833-59159852 | MS.gene39979:intron | 40.0% | |
| CTCAGTTGACATCTGATAGA+CGG | - | chr1.4:59156456-59156475 | MS.gene39979:intron | 40.0% | |
| GCCAATGCAGTATAGTCTTT+GGG | + | chr1.4:59157261-59157280 | None:intergenic | 40.0% | |
| GGGAAAAACTAGAAGTGATG+AGG | + | chr1.4:59160124-59160143 | None:intergenic | 40.0% | |
| GGGAGAAGTTCACTGAAATT+GGG | - | chr1.4:59159297-59159316 | MS.gene39979:intron | 40.0% | |
| GTAACTTGATACACTCGTGT+AGG | - | chr1.4:59158601-59158620 | MS.gene39979:intron | 40.0% | |
| GTCTATCAGATGTCAACTGA+GGG | + | chr1.4:59156457-59156476 | None:intergenic | 40.0% | |
| TAAATCCTAGTTGCCAGAGT+TGG | + | chr1.4:59157084-59157103 | None:intergenic | 40.0% | |
| TACCTAAGGAAATGCACCTA+TGG | - | chr1.4:59155717-59155736 | MS.gene39979:intron | 40.0% | |
| TAGGGAATTCCTTCAGCTTA+AGG | + | chr1.4:59157176-59157195 | None:intergenic | 40.0% | |
| TCAGCAACTCCTGAAAGAAA+GGG | + | chr1.4:59160206-59160225 | None:intergenic | 40.0% | |
| TCCCTACCCATCTTAAAAAC+TGG | + | chr1.4:59157509-59157528 | None:intergenic | 40.0% | |
| TCTAGACACTACAGCATCAA+TGG | + | chr1.4:59156498-59156517 | None:intergenic | 40.0% | |
| TCTCGCCATATGACAAATCA+AGG | - | chr1.4:59156029-59156048 | MS.gene39979:intron | 40.0% | |
| TGCCAATGCAGTATAGTCTT+TGG | + | chr1.4:59157262-59157281 | None:intergenic | 40.0% | |
| TTGTAGATCGCGGAAAATTG+TGG | + | chr1.4:59155458-59155477 | None:intergenic | 40.0% | |
| ! | ACACGTAAATGAGCATTGTG+TGG | - | chr1.4:59159679-59159698 | MS.gene39979:intron | 40.0% |
| ! | ATCAGTGTGAATTTTCCGTG+AGG | - | chr1.4:59158809-59158828 | MS.gene39979:intron | 40.0% |
| ! | ATTTTGCTCCTAATCTGGAG+GGG | + | chr1.4:59157681-59157700 | None:intergenic | 40.0% |
| ! | CACTGTTGGAATTTTCTCAC+AGG | - | chr1.4:59158528-59158547 | MS.gene39979:intron | 40.0% |
| ! | CACTTTTCATTGCATGGCTT+CGG | - | chr1.4:59155166-59155185 | MS.gene39979:intron | 40.0% |
| ! | GATTTTGCTCCTAATCTGGA+GGG | + | chr1.4:59157682-59157701 | None:intergenic | 40.0% |
| ! | GTAGGGAGAGACAATTTTGA+TGG | - | chr1.4:59157522-59157541 | MS.gene39979:intron | 40.0% |
| ! | TGATTTTGCTCCTAATCTGG+AGG | + | chr1.4:59157683-59157702 | None:intergenic | 40.0% |
| !! | AAACTTAGGGGCATTTCCTT+AGG | - | chr1.4:59155569-59155588 | MS.gene39979:intron | 40.0% |
| !! | AAAGCATTGTCATTCCATGC+AGG | + | chr1.4:59157299-59157318 | None:intergenic | 40.0% |
| !! | AGGAGTGCTTATTTGAGCAA+TGG | + | chr1.4:59155990-59156009 | None:intergenic | 40.0% |
| !! | GAAAGGTATTACGGAAGACA+AGG | + | chr1.4:59158502-59158521 | None:intergenic | 40.0% |
| !! | GACAATGCTTTTAAGTGTGC+CGG | - | chr1.4:59157308-59157327 | MS.gene39979:intron | 40.0% |
| !! | GTGAAGACAAGTACTGGTAA+TGG | - | chr1.4:59157549-59157568 | MS.gene39979:intron | 40.0% |
| !! | TATGTCACTCTAAAGCTCTC+TGG | - | chr1.4:59154604-59154623 | MS.gene39979:intron | 40.0% |
| !! | TGGTGATGTGGCATTGATTT+GGG | + | chr1.4:59159719-59159738 | None:intergenic | 40.0% |
| !! | TTTTGAAAGATGGAACGGAG+TGG | + | chr1.4:59154517-59154536 | None:intergenic | 40.0% |
| AAGAACCAACTCTGGCAACT+AGG | - | chr1.4:59157076-59157095 | MS.gene39979:intron | 45.0% | |
| ACCAAAAGAGAACTGGCATC+AGG | + | chr1.4:59156010-59156029 | None:intergenic | 45.0% | |
| ACCCAGAAAGGGATTTGTGA+GGG | - | chr1.4:59154760-59154779 | MS.gene39979:intron | 45.0% | |
| ACCTTAGACTGGAACAGTGT+CGG | - | chr1.4:59157594-59157613 | MS.gene39979:intron | 45.0% | |
| AGCAGACACTCCCTTTCTAA+AGG | - | chr1.4:59154631-59154650 | MS.gene39979:intron | 45.0% | |
| ATTGGGCTACCTTAAGCTGA+AGG | - | chr1.4:59157164-59157183 | MS.gene39979:intron | 45.0% | |
| CACTACAGCATCAATGGAAG+TGG | + | chr1.4:59156492-59156511 | None:intergenic | 45.0% | |
| CAGCTTAAGGTAGCCCAATA+AGG | + | chr1.4:59157163-59157182 | None:intergenic | 45.0% | |
| CCCCAAAGACTATACTGCAT+TGG | - | chr1.4:59157257-59157276 | MS.gene39979:intron | 45.0% | |
| CGTCTATCAGATGTCAACTG+AGG | + | chr1.4:59156458-59156477 | None:intergenic | 45.0% | |
| GAAAGGTGAAGAACCAACTC+TGG | - | chr1.4:59157068-59157087 | MS.gene39979:intron | 45.0% | |
| GATGTCGAACAACTGATCCT+TGG | - | chr1.4:59156905-59156924 | MS.gene39979:intron | 45.0% | |
| GCAATGGTCTTCAAGCTAAC+TGG | + | chr1.4:59155974-59155993 | None:intergenic | 45.0% | |
| GCAGACACTCCCTTTCTAAA+GGG | - | chr1.4:59154632-59154651 | MS.gene39979:intron | 45.0% | |
| GGAGAGCAAAACCCTCAAAT+TGG | + | chr1.4:59158108-59158127 | None:intergenic | 45.0% | |
| GGAGCTCACAAAAGAAGTCT+TGG | - | chr1.4:59156926-59156945 | MS.gene39979:intron | 45.0% | |
| GGGGAGAAGTTCACTGAAAT+TGG | - | chr1.4:59159296-59159315 | MS.gene39979:intron | 45.0% | |
| GGTATGACTCCCAATAACGA+TGG | - | chr1.4:59156410-59156429 | MS.gene39979:intron | 45.0% | |
| GTCAGCAACTCCTGAAAGAA+AGG | + | chr1.4:59160207-59160226 | None:intergenic | 45.0% | |
| GTCCTCGAAATTGTGAGCAT+CGG | - | chr1.4:59159548-59159567 | MS.gene39979:intron | 45.0% | |
| GTTGACATCTGATAGACGGA+AGG | - | chr1.4:59156460-59156479 | MS.gene39979:intron | 45.0% | |
| TACCCAGAAAGGGATTTGTG+AGG | - | chr1.4:59154759-59154778 | MS.gene39979:intron | 45.0% | |
| TACCGATGCTCACAATTTCG+AGG | + | chr1.4:59159553-59159572 | None:intergenic | 45.0% | |
| TCCCATAGGTGCATTTCCTT+AGG | + | chr1.4:59155722-59155741 | None:intergenic | 45.0% | |
| TCGGATGGAGAAAACAAGGT+AGG | - | chr1.4:59157613-59157632 | MS.gene39979:intron | 45.0% | |
| TGAACAGCAGACCAAGTCTA+AGG | + | chr1.4:59157228-59157247 | None:intergenic | 45.0% | |
| TGTGCAGAAAGAAGGGCTTT+GGG | + | chr1.4:59154553-59154572 | None:intergenic | 45.0% | |
| TTCCTTACCTGTTGCGGTTA+GGG | - | chr1.4:59159645-59159664 | MS.gene39979:intron | 45.0% | |
| ! | AAGAGGAGTGTGCAGAAAGA+AGG | + | chr1.4:59154561-59154580 | None:intergenic | 45.0% |
| ! | AGAGGAGTGTGCAGAAAGAA+GGG | + | chr1.4:59154560-59154579 | None:intergenic | 45.0% |
| ! | AGCTATCTGAGGTCCTTGTA+AGG | - | chr1.4:59156872-59156891 | MS.gene39979:intron | 45.0% |
| ! | AGTGTCGGATGGAGAAAACA+AGG | - | chr1.4:59157609-59157628 | MS.gene39979:intron | 45.0% |
| ! | CACTAACCAAGCTTTGGCAA+TGG | - | chr1.4:59157461-59157480 | MS.gene39979:intron | 45.0% |
| ! | GACTTCTTTTGTGAGCTCCA+AGG | + | chr1.4:59156925-59156944 | None:intergenic | 45.0% |
| ! | GCGAGCTTTATAGGTGTGAA+AGG | - | chr1.4:59157051-59157070 | MS.gene39979:intron | 45.0% |
| ! | GCTATCTGAGGTCCTTGTAA+GGG | - | chr1.4:59156873-59156892 | MS.gene39979:intron | 45.0% |
| ! | TCCTGATGCCAGTTCTCTTT+TGG | - | chr1.4:59156006-59156025 | MS.gene39979:intron | 45.0% |
| ! | TTTGAGGGTTTTGCTCTCCT+TGG | - | chr1.4:59158109-59158128 | MS.gene39979:intron | 45.0% |
| !! | AAAGAAGTCTTGGTGATGCC+TGG | - | chr1.4:59156936-59156955 | MS.gene39979:intron | 45.0% |
| !! | AGAAGGGCTTTGGGAACAAT+TGG | + | chr1.4:59154544-59154563 | None:intergenic | 45.0% |
| !! | AGAGCGTTTGATGGTGAAAG+AGG | + | chr1.4:59154578-59154597 | None:intergenic | 45.0% |
| !! | CTTTGGTGCCTTTGACTTGA+TGG | - | chr1.4:59159501-59159520 | MS.gene39979:intron | 45.0% |
| !! | GCATTGATTTGGGATCCATG+TGG | + | chr1.4:59159709-59159728 | None:intergenic | 45.0% |
| !! | GTGGTGATGTGGCATTGATT+TGG | + | chr1.4:59159720-59159739 | None:intergenic | 45.0% |
| !! | TGGTGTTGTTGGAGAGAAAG+AGG | + | chr1.4:59154497-59154516 | None:intergenic | 45.0% |
| !! | AACTATATTAAAAATATTAA+AGG | - | chr1.4:59156789-59156808 | MS.gene39979:intron | 5.0% |
| !!! | ATTAAATAAAAAAGTATTAA+TGG | + | chr1.4:59155039-59155058 | None:intergenic | 5.0% |
| AGCCCTCACAAATCCCTTTC+TGG | + | chr1.4:59154765-59154784 | None:intergenic | 50.0% | |
| AGGTCCTTCCTTACCTGTTG+CGG | - | chr1.4:59159639-59159658 | MS.gene39979:intron | 50.0% | |
| AGTCGATTGTTAGGCACGTG+AGG | + | chr1.4:59157420-59157439 | None:intergenic | 50.0% | |
| ATGTCTCAGATGGGACCGTA+TGG | + | chr1.4:59156239-59156258 | None:intergenic | 50.0% | |
| CAGCTGCTGAAACCTTAGAC+TGG | - | chr1.4:59157583-59157602 | MS.gene39979:intron | 50.0% | |
| CTAACCGCAACAGGTAAGGA+AGG | + | chr1.4:59159646-59159665 | None:intergenic | 50.0% | |
| CTTCCTTACCTGTTGCGGTT+AGG | - | chr1.4:59159644-59159663 | MS.gene39979:intron | 50.0% | |
| GCATTGTGTGGTCTTCCACA+TGG | - | chr1.4:59159691-59159710 | MS.gene39979:intron | 50.0% | |
| GCCCTCACAAATCCCTTTCT+GGG | + | chr1.4:59154764-59154783 | None:intergenic | 50.0% | |
| GGAACAAACCCCTCCAGATT+AGG | - | chr1.4:59157670-59157689 | MS.gene39979:intron | 50.0% | |
| GGCAGTGTGAAGACAAGTAC+TGG | - | chr1.4:59157543-59157562 | MS.gene39979:intron | 50.0% | |
| GGTCACTTCAGCTTTGCACT+TGG | + | chr1.4:59155866-59155885 | None:intergenic | 50.0% | |
| GTGTGCAGAAAGAAGGGCTT+TGG | + | chr1.4:59154554-59154573 | None:intergenic | 50.0% | |
| TCATAACCCCTAACCGCAAC+AGG | + | chr1.4:59159655-59159674 | None:intergenic | 50.0% | |
| TCCGACACTGTTCCAGTCTA+AGG | + | chr1.4:59157598-59157617 | None:intergenic | 50.0% | |
| TCCTTACCTGTTGCGGTTAG+GGG | - | chr1.4:59159646-59159665 | MS.gene39979:intron | 50.0% | |
| TGAGCGCACTAACCAAGCTT+TGG | - | chr1.4:59157455-59157474 | MS.gene39979:intron | 50.0% | |
| TGGCGAGACCAAAAGAGAAC+TGG | + | chr1.4:59156017-59156036 | None:intergenic | 50.0% | |
| ! | TAGACTGGAACAGTGTCGGA+TGG | - | chr1.4:59157598-59157617 | MS.gene39979:intron | 50.0% |
| !! | AAGTCTTGGTGATGCCTGGA+AGG | - | chr1.4:59156940-59156959 | MS.gene39979:intron | 50.0% |
| !! | ATGGAACGGAGTGGTGTTGT+TGG | + | chr1.4:59154508-59154527 | None:intergenic | 50.0% |
| !! | GGGCTTTGGGAACAATTGGA+AGG | + | chr1.4:59154540-59154559 | None:intergenic | 50.0% |
| ACCCCTAACCGCAACAGGTA+AGG | + | chr1.4:59159650-59159669 | None:intergenic | 55.0% | |
| TGTGCGCCATTGCCAAAGCT+TGG | + | chr1.4:59157470-59157489 | None:intergenic | 55.0% | |
| GCTTTGGCAATGGCGCACAG+AGG | - | chr1.4:59157471-59157490 | MS.gene39979:intron | 60.0% | |
| GGCAATGGCGCACAGAGGTG+AGG | - | chr1.4:59157476-59157495 | MS.gene39979:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 59154487 | 59160233 | 59154487 | ID=MS.gene39979 |
| chr1.4 | mRNA | 59154487 | 59160233 | 59154487 | ID=MS.gene39979.t1;Parent=MS.gene39979 |
| chr1.4 | exon | 59160046 | 59160233 | 59160046 | ID=MS.gene39979.t1.exon1;Parent=MS.gene39979.t1 |
| chr1.4 | CDS | 59160046 | 59160233 | 59160046 | ID=cds.MS.gene39979.t1;Parent=MS.gene39979.t1 |
| chr1.4 | exon | 59159885 | 59159954 | 59159885 | ID=MS.gene39979.t1.exon2;Parent=MS.gene39979.t1 |
| chr1.4 | CDS | 59159885 | 59159954 | 59159885 | ID=cds.MS.gene39979.t1;Parent=MS.gene39979.t1 |
| chr1.4 | exon | 59159704 | 59159799 | 59159704 | ID=MS.gene39979.t1.exon3;Parent=MS.gene39979.t1 |
| chr1.4 | CDS | 59159704 | 59159799 | 59159704 | ID=cds.MS.gene39979.t1;Parent=MS.gene39979.t1 |
| chr1.4 | exon | 59158670 | 59158767 | 59158670 | ID=MS.gene39979.t1.exon4;Parent=MS.gene39979.t1 |
| chr1.4 | CDS | 59158670 | 59158767 | 59158670 | ID=cds.MS.gene39979.t1;Parent=MS.gene39979.t1 |
| chr1.4 | exon | 59158239 | 59158350 | 59158239 | ID=MS.gene39979.t1.exon5;Parent=MS.gene39979.t1 |
| chr1.4 | CDS | 59158239 | 59158350 | 59158239 | ID=cds.MS.gene39979.t1;Parent=MS.gene39979.t1 |
| chr1.4 | exon | 59156677 | 59156718 | 59156677 | ID=MS.gene39979.t1.exon6;Parent=MS.gene39979.t1 |
| chr1.4 | CDS | 59156677 | 59156718 | 59156677 | ID=cds.MS.gene39979.t1;Parent=MS.gene39979.t1 |
| chr1.4 | exon | 59156276 | 59156332 | 59156276 | ID=MS.gene39979.t1.exon7;Parent=MS.gene39979.t1 |
| chr1.4 | CDS | 59156276 | 59156332 | 59156276 | ID=cds.MS.gene39979.t1;Parent=MS.gene39979.t1 |
| chr1.4 | exon | 59156120 | 59156170 | 59156120 | ID=MS.gene39979.t1.exon8;Parent=MS.gene39979.t1 |
| chr1.4 | CDS | 59156120 | 59156170 | 59156120 | ID=cds.MS.gene39979.t1;Parent=MS.gene39979.t1 |
| chr1.4 | exon | 59155742 | 59155798 | 59155742 | ID=MS.gene39979.t1.exon9;Parent=MS.gene39979.t1 |
| chr1.4 | CDS | 59155742 | 59155798 | 59155742 | ID=cds.MS.gene39979.t1;Parent=MS.gene39979.t1 |
| chr1.4 | exon | 59154487 | 59154504 | 59154487 | ID=MS.gene39979.t1.exon10;Parent=MS.gene39979.t1 |
| chr1.4 | CDS | 59154487 | 59154504 | 59154487 | ID=cds.MS.gene39979.t1;Parent=MS.gene39979.t1 |
| Gene Sequence |
| Protein sequence |
