Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87890.t1 | XP_003590415.2 | 100 | 141 | 0 | 0 | 32 | 172 | 117 | 257 | 2.30E-73 | 285 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87890.t1 | Q9SR70 | 87.2 | 141 | 18 | 0 | 32 | 172 | 90 | 230 | 1.1e-68 | 260.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87890.t1 | G7I9E0 | 100.0 | 141 | 0 | 0 | 32 | 172 | 117 | 257 | 1.6e-73 | 285.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene87890 | 0.849155 | 3.88E-60 | -1.69E-46 |
| MS.gene049217 | MS.gene87890 | 0.826521 | 2.59E-54 | -1.69E-46 |
| MS.gene049222 | MS.gene87890 | 0.838884 | 2.21E-57 | -1.69E-46 |
| MS.gene049285 | MS.gene87890 | 0.802514 | 5.41E-49 | -1.69E-46 |
| MS.gene049320 | MS.gene87890 | 0.818801 | 1.62E-52 | -1.69E-46 |
| MS.gene049351 | MS.gene87890 | 0.830262 | 3.24E-55 | -1.69E-46 |
| MS.gene049356 | MS.gene87890 | 0.867513 | 1.30E-65 | -1.69E-46 |
| MS.gene049369 | MS.gene87890 | 0.849645 | 2.83E-60 | -1.69E-46 |
| MS.gene049396 | MS.gene87890 | 0.815643 | 8.32E-52 | -1.69E-46 |
| MS.gene049427 | MS.gene87890 | 0.826091 | 3.28E-54 | -1.69E-46 |
| MS.gene049609 | MS.gene87890 | 0.884604 | 1.66E-71 | -1.69E-46 |
| MS.gene049615 | MS.gene87890 | 0.807734 | 4.37E-50 | -1.69E-46 |
| MS.gene049661 | MS.gene87890 | 0.867253 | 1.57E-65 | -1.69E-46 |
| MS.gene049662 | MS.gene87890 | 0.856585 | 2.91E-62 | -1.69E-46 |
| MS.gene049805 | MS.gene87890 | 0.869723 | 2.50E-66 | -1.69E-46 |
| MS.gene050076 | MS.gene87890 | 0.827379 | 1.62E-54 | -1.69E-46 |
| MS.gene050122 | MS.gene87890 | 0.841215 | 5.44E-58 | -1.69E-46 |
| MS.gene050301 | MS.gene87890 | 0.814209 | 1.73E-51 | -1.69E-46 |
| MS.gene050397 | MS.gene87890 | 0.829673 | 4.51E-55 | -1.69E-46 |
| MS.gene050432 | MS.gene87890 | 0.866726 | 2.31E-65 | -1.69E-46 |
| MS.gene050520 | MS.gene87890 | 0.832328 | 1.01E-55 | -1.69E-46 |
| MS.gene050529 | MS.gene87890 | 0.806495 | 8.00E-50 | -1.69E-46 |
| MS.gene050538 | MS.gene87890 | 0.836612 | 8.45E-57 | -1.69E-46 |
| MS.gene050593 | MS.gene87890 | 0.887037 | 2.03E-72 | -1.69E-46 |
| MS.gene050670 | MS.gene87890 | 0.910737 | 1.34E-82 | -1.69E-46 |
| MS.gene050675 | MS.gene87890 | 0.806355 | 8.56E-50 | -1.69E-46 |
| MS.gene050686 | MS.gene87890 | 0.836864 | 7.29E-57 | -1.69E-46 |
| MS.gene050699 | MS.gene87890 | 0.812631 | 3.85E-51 | -1.69E-46 |
| MS.gene050747 | MS.gene87890 | 0.851894 | 6.59E-61 | -1.69E-46 |
| MS.gene050767 | MS.gene87890 | 0.824598 | 7.40E-54 | -1.69E-46 |
| MS.gene050770 | MS.gene87890 | 0.825845 | 3.75E-54 | -1.69E-46 |
| MS.gene050772 | MS.gene87890 | 0.889462 | 2.37E-73 | -1.69E-46 |
| MS.gene05080 | MS.gene87890 | 0.80072 | 1.26E-48 | -1.69E-46 |
| MS.gene050812 | MS.gene87890 | 0.801078 | 1.07E-48 | -1.69E-46 |
| MS.gene050950 | MS.gene87890 | 0.842652 | 2.27E-58 | -1.69E-46 |
| MS.gene05101 | MS.gene87890 | 0.807857 | 4.12E-50 | -1.69E-46 |
| MS.gene05105 | MS.gene87890 | 0.926151 | 6.95E-91 | -1.69E-46 |
| MS.gene051228 | MS.gene87890 | 0.810501 | 1.12E-50 | -1.69E-46 |
| MS.gene051255 | MS.gene87890 | 0.809813 | 1.57E-50 | -1.69E-46 |
| MS.gene051360 | MS.gene87890 | 0.807152 | 5.81E-50 | -1.69E-46 |
| MS.gene051387 | MS.gene87890 | 0.884378 | 2.02E-71 | -1.69E-46 |
| MS.gene051525 | MS.gene87890 | 0.822935 | 1.82E-53 | -1.69E-46 |
| MS.gene051582 | MS.gene87890 | 0.812114 | 4.99E-51 | -1.69E-46 |
| MS.gene051666 | MS.gene87890 | 0.875047 | 4.19E-68 | -1.69E-46 |
| MS.gene051692 | MS.gene87890 | 0.84562 | 3.63E-59 | -1.69E-46 |
| MS.gene051694 | MS.gene87890 | 0.808478 | 3.04E-50 | -1.69E-46 |
| MS.gene051810 | MS.gene87890 | 0.802244 | 6.15E-49 | -1.69E-46 |
| MS.gene051838 | MS.gene87890 | 0.81314 | 2.98E-51 | -1.69E-46 |
| MS.gene051858 | MS.gene87890 | 0.849712 | 2.71E-60 | -1.69E-46 |
| MS.gene051874 | MS.gene87890 | 0.804935 | 1.70E-49 | -1.69E-46 |
| MS.gene051877 | MS.gene87890 | 0.846086 | 2.71E-59 | -1.69E-46 |
| MS.gene052078 | MS.gene87890 | 0.804071 | 2.58E-49 | -1.69E-46 |
| MS.gene052136 | MS.gene87890 | 0.806732 | 7.13E-50 | -1.69E-46 |
| MS.gene052188 | MS.gene87890 | 0.854909 | 8.99E-62 | -1.69E-46 |
| MS.gene052253 | MS.gene87890 | 0.835881 | 1.30E-56 | -1.69E-46 |
| MS.gene052271 | MS.gene87890 | 0.82616 | 3.16E-54 | -1.69E-46 |
| MS.gene052310 | MS.gene87890 | 0.85692 | 2.32E-62 | -1.69E-46 |
| MS.gene052322 | MS.gene87890 | 0.823958 | 1.05E-53 | -1.69E-46 |
| MS.gene052340 | MS.gene87890 | 0.822181 | 2.72E-53 | -1.69E-46 |
| MS.gene052346 | MS.gene87890 | 0.82663 | 2.44E-54 | -1.69E-46 |
| MS.gene052379 | MS.gene87890 | 0.804898 | 1.73E-49 | -1.69E-46 |
| MS.gene052414 | MS.gene87890 | 0.842015 | 3.35E-58 | -1.69E-46 |
| MS.gene052421 | MS.gene87890 | 0.885747 | 6.23E-72 | -1.69E-46 |
| MS.gene052481 | MS.gene87890 | 0.846109 | 2.67E-59 | -1.69E-46 |
| MS.gene052484 | MS.gene87890 | 0.858833 | 6.28E-63 | -1.69E-46 |
| MS.gene052485 | MS.gene87890 | 0.871511 | 6.46E-67 | -1.69E-46 |
| MS.gene052501 | MS.gene87890 | 0.848355 | 6.46E-60 | -1.69E-46 |
| MS.gene052503 | MS.gene87890 | 0.813508 | 2.47E-51 | -1.69E-46 |
| MS.gene052505 | MS.gene87890 | 0.840854 | 6.76E-58 | -1.69E-46 |
| MS.gene052615 | MS.gene87890 | 0.835017 | 2.14E-56 | -1.69E-46 |
| MS.gene052982 | MS.gene87890 | 0.841817 | 3.78E-58 | -1.69E-46 |
| MS.gene052999 | MS.gene87890 | 0.800757 | 1.24E-48 | -1.69E-46 |
| MS.gene053009 | MS.gene87890 | 0.8037 | 3.08E-49 | -1.69E-46 |
| MS.gene053103 | MS.gene87890 | 0.837545 | 4.88E-57 | -1.69E-46 |
| MS.gene053104 | MS.gene87890 | 0.858886 | 6.05E-63 | -1.69E-46 |
| MS.gene053107 | MS.gene87890 | 0.80441 | 2.19E-49 | -1.69E-46 |
| MS.gene053207 | MS.gene87890 | 0.86978 | 2.40E-66 | -1.69E-46 |
| MS.gene053209 | MS.gene87890 | 0.861465 | 1.01E-63 | -1.69E-46 |
| MS.gene053213 | MS.gene87890 | 0.864191 | 1.45E-64 | -1.69E-46 |
| MS.gene053286 | MS.gene87890 | 0.849125 | 3.95E-60 | -1.69E-46 |
| MS.gene053322 | MS.gene87890 | 0.843637 | 1.24E-58 | -1.69E-46 |
| MS.gene053436 | MS.gene87890 | 0.82602 | 3.41E-54 | -1.69E-46 |
| MS.gene053449 | MS.gene87890 | 0.845184 | 4.76E-59 | -1.69E-46 |
| MS.gene053574 | MS.gene87890 | 0.866644 | 2.45E-65 | -1.69E-46 |
| MS.gene053579 | MS.gene87890 | 0.800855 | 1.18E-48 | -1.69E-46 |
| MS.gene053626 | MS.gene87890 | 0.805217 | 1.48E-49 | -1.69E-46 |
| MS.gene053632 | MS.gene87890 | 0.853896 | 1.77E-61 | -1.69E-46 |
| MS.gene053758 | MS.gene87890 | 0.822665 | 2.10E-53 | -1.69E-46 |
| MS.gene053813 | MS.gene87890 | 0.853014 | 3.16E-61 | -1.69E-46 |
| MS.gene053824 | MS.gene87890 | 0.814939 | 1.19E-51 | -1.69E-46 |
| MS.gene053912 | MS.gene87890 | 0.806439 | 8.22E-50 | -1.69E-46 |
| MS.gene053916 | MS.gene87890 | 0.858273 | 9.23E-63 | -1.69E-46 |
| MS.gene054123 | MS.gene87890 | 0.823185 | 1.59E-53 | -1.69E-46 |
| MS.gene054376 | MS.gene87890 | 0.821403 | 4.11E-53 | -1.69E-46 |
| MS.gene054600 | MS.gene87890 | 0.839733 | 1.33E-57 | -1.69E-46 |
| MS.gene054642 | MS.gene87890 | 0.834256 | 3.33E-56 | -1.69E-46 |
| MS.gene054802 | MS.gene87890 | 0.832778 | 7.78E-56 | -1.69E-46 |
| MS.gene054803 | MS.gene87890 | 0.828858 | 7.11E-55 | -1.69E-46 |
| MS.gene054804 | MS.gene87890 | 0.834294 | 3.26E-56 | -1.69E-46 |
| MS.gene054927 | MS.gene87890 | 0.856677 | 2.74E-62 | -1.69E-46 |
| MS.gene054955 | MS.gene87890 | 0.810245 | 1.27E-50 | -1.69E-46 |
| MS.gene05505 | MS.gene87890 | 0.895947 | 5.90E-76 | -1.69E-46 |
| MS.gene055116 | MS.gene87890 | 0.894718 | 1.89E-75 | -1.69E-46 |
| MS.gene055206 | MS.gene87890 | 0.847024 | 1.50E-59 | -1.69E-46 |
| MS.gene055224 | MS.gene87890 | 0.815261 | 1.01E-51 | -1.69E-46 |
| MS.gene055277 | MS.gene87890 | 0.829252 | 5.71E-55 | -1.69E-46 |
| MS.gene055289 | MS.gene87890 | 0.846901 | 1.62E-59 | -1.69E-46 |
| MS.gene055362 | MS.gene87890 | 0.819028 | 1.44E-52 | -1.69E-46 |
| MS.gene055369 | MS.gene87890 | 0.817279 | 3.58E-52 | -1.69E-46 |
| MS.gene055397 | MS.gene87890 | 0.814835 | 1.26E-51 | -1.69E-46 |
| MS.gene055499 | MS.gene87890 | 0.831426 | 1.68E-55 | -1.69E-46 |
| MS.gene055502 | MS.gene87890 | 0.812497 | 4.12E-51 | -1.69E-46 |
| MS.gene055577 | MS.gene87890 | 0.822161 | 2.75E-53 | -1.69E-46 |
| MS.gene055633 | MS.gene87890 | 0.804561 | 2.04E-49 | -1.69E-46 |
| MS.gene055647 | MS.gene87890 | 0.838708 | 2.45E-57 | -1.69E-46 |
| MS.gene055722 | MS.gene87890 | 0.871784 | 5.25E-67 | -1.69E-46 |
| MS.gene055741 | MS.gene87890 | 0.815988 | 6.97E-52 | -1.69E-46 |
| MS.gene055744 | MS.gene87890 | 0.818428 | 1.97E-52 | -1.69E-46 |
| MS.gene055802 | MS.gene87890 | 0.817824 | 2.70E-52 | -1.69E-46 |
| MS.gene055909 | MS.gene87890 | 0.846754 | 1.78E-59 | -1.69E-46 |
| MS.gene055911 | MS.gene87890 | 0.848104 | 7.58E-60 | -1.69E-46 |
| MS.gene05592 | MS.gene87890 | 0.881861 | 1.69E-70 | -1.69E-46 |
| MS.gene055941 | MS.gene87890 | 0.84538 | 4.21E-59 | -1.69E-46 |
| MS.gene05602 | MS.gene87890 | 0.882362 | 1.11E-70 | -1.69E-46 |
| MS.gene056191 | MS.gene87890 | 0.847334 | 1.24E-59 | -1.69E-46 |
| MS.gene056374 | MS.gene87890 | 0.820005 | 8.62E-53 | -1.69E-46 |
| MS.gene056407 | MS.gene87890 | 0.888518 | 5.50E-73 | -1.69E-46 |
| MS.gene056410 | MS.gene87890 | 0.839916 | 1.19E-57 | -1.69E-46 |
| MS.gene056422 | MS.gene87890 | 0.831805 | 1.36E-55 | -1.69E-46 |
| MS.gene056448 | MS.gene87890 | 0.815029 | 1.14E-51 | -1.69E-46 |
| MS.gene056487 | MS.gene87890 | 0.818676 | 1.73E-52 | -1.69E-46 |
| MS.gene056511 | MS.gene87890 | 0.898078 | 7.55E-77 | -1.69E-46 |
| MS.gene056609 | MS.gene87890 | 0.83197 | 1.23E-55 | -1.69E-46 |
| MS.gene05664 | MS.gene87890 | 0.839665 | 1.38E-57 | -1.69E-46 |
| MS.gene056657 | MS.gene87890 | 0.82396 | 1.05E-53 | -1.69E-46 |
| MS.gene056659 | MS.gene87890 | 0.818017 | 2.44E-52 | -1.69E-46 |
| MS.gene05666 | MS.gene87890 | 0.835445 | 1.67E-56 | -1.69E-46 |
| MS.gene056796 | MS.gene87890 | 0.808122 | 3.62E-50 | -1.69E-46 |
| MS.gene056947 | MS.gene87890 | 0.808837 | 2.55E-50 | -1.69E-46 |
| MS.gene057011 | MS.gene87890 | 0.817861 | 2.65E-52 | -1.69E-46 |
| MS.gene05702 | MS.gene87890 | 0.814905 | 1.21E-51 | -1.69E-46 |
| MS.gene057076 | MS.gene87890 | 0.863437 | 2.49E-64 | -1.69E-46 |
| MS.gene057123 | MS.gene87890 | 0.813821 | 2.11E-51 | -1.69E-46 |
| MS.gene057124 | MS.gene87890 | 0.859261 | 4.67E-63 | -1.69E-46 |
| MS.gene057129 | MS.gene87890 | 0.853081 | 3.02E-61 | -1.69E-46 |
| MS.gene057146 | MS.gene87890 | 0.865873 | 4.31E-65 | -1.69E-46 |
| MS.gene057289 | MS.gene87890 | 0.812813 | 3.51E-51 | -1.69E-46 |
| MS.gene057331 | MS.gene87890 | 0.86988 | 2.22E-66 | -1.69E-46 |
| MS.gene05735 | MS.gene87890 | 0.828814 | 7.29E-55 | -1.69E-46 |
| MS.gene057416 | MS.gene87890 | 0.878697 | 2.28E-69 | -1.69E-46 |
| MS.gene057448 | MS.gene87890 | 0.809448 | 1.88E-50 | -1.69E-46 |
| MS.gene057450 | MS.gene87890 | 0.814527 | 1.47E-51 | -1.69E-46 |
| MS.gene057658 | MS.gene87890 | 0.803601 | 3.22E-49 | -1.69E-46 |
| MS.gene057734 | MS.gene87890 | 0.869946 | 2.11E-66 | -1.69E-46 |
| MS.gene057749 | MS.gene87890 | 0.870294 | 1.63E-66 | -1.69E-46 |
| MS.gene057823 | MS.gene87890 | 0.876044 | 1.91E-68 | -1.69E-46 |
| MS.gene057856 | MS.gene87890 | 0.83096 | 2.19E-55 | -1.69E-46 |
| MS.gene057926 | MS.gene87890 | 0.853669 | 2.05E-61 | -1.69E-46 |
| MS.gene057927 | MS.gene87890 | 0.820718 | 5.92E-53 | -1.69E-46 |
| MS.gene058002 | MS.gene87890 | 0.809103 | 2.23E-50 | -1.69E-46 |
| MS.gene058006 | MS.gene87890 | 0.855365 | 6.62E-62 | -1.69E-46 |
| MS.gene058007 | MS.gene87890 | 0.836852 | 7.34E-57 | -1.69E-46 |
| MS.gene058019 | MS.gene87890 | 0.888264 | 6.89E-73 | -1.69E-46 |
| MS.gene058082 | MS.gene87890 | 0.824703 | 6.99E-54 | -1.69E-46 |
| MS.gene05811 | MS.gene87890 | 0.802402 | 5.71E-49 | -1.69E-46 |
| MS.gene058120 | MS.gene87890 | 0.806591 | 7.64E-50 | -1.69E-46 |
| MS.gene058130 | MS.gene87890 | 0.820969 | 5.18E-53 | -1.69E-46 |
| MS.gene058233 | MS.gene87890 | 0.820587 | 6.34E-53 | -1.69E-46 |
| MS.gene058293 | MS.gene87890 | 0.866301 | 3.15E-65 | -1.69E-46 |
| MS.gene058323 | MS.gene87890 | 0.840931 | 6.46E-58 | -1.69E-46 |
| MS.gene058338 | MS.gene87890 | 0.806039 | 9.98E-50 | -1.69E-46 |
| MS.gene058365 | MS.gene87890 | 0.835537 | 1.58E-56 | -1.69E-46 |
| MS.gene058376 | MS.gene87890 | 0.825099 | 5.64E-54 | -1.69E-46 |
| MS.gene05837 | MS.gene87890 | 0.803122 | 4.05E-49 | -1.69E-46 |
| MS.gene058419 | MS.gene87890 | 0.836455 | 9.26E-57 | -1.69E-46 |
| MS.gene058444 | MS.gene87890 | 0.810022 | 1.42E-50 | -1.69E-46 |
| MS.gene058660 | MS.gene87890 | 0.870621 | 1.27E-66 | -1.69E-46 |
| MS.gene058700 | MS.gene87890 | 0.844615 | 6.77E-59 | -1.69E-46 |
| MS.gene058723 | MS.gene87890 | 0.839659 | 1.39E-57 | -1.69E-46 |
| MS.gene058787 | MS.gene87890 | 0.82168 | 3.55E-53 | -1.69E-46 |
| MS.gene058788 | MS.gene87890 | 0.80427 | 2.34E-49 | -1.69E-46 |
| MS.gene058790 | MS.gene87890 | 0.803229 | 3.85E-49 | -1.69E-46 |
| MS.gene058838 | MS.gene87890 | 0.809306 | 2.02E-50 | -1.69E-46 |
| MS.gene05883 | MS.gene87890 | 0.803083 | 4.13E-49 | -1.69E-46 |
| MS.gene058928 | MS.gene87890 | 0.827279 | 1.71E-54 | -1.69E-46 |
| MS.gene058948 | MS.gene87890 | 0.847859 | 8.85E-60 | -1.69E-46 |
| MS.gene058993 | MS.gene87890 | 0.809996 | 1.44E-50 | -1.69E-46 |
| MS.gene059023 | MS.gene87890 | 0.805431 | 1.34E-49 | -1.69E-46 |
| MS.gene05907 | MS.gene87890 | 0.831732 | 1.41E-55 | -1.69E-46 |
| MS.gene05913 | MS.gene87890 | 0.808047 | 3.75E-50 | -1.69E-46 |
| MS.gene05934 | MS.gene87890 | 0.847988 | 8.16E-60 | -1.69E-46 |
| MS.gene059366 | MS.gene87890 | 0.854724 | 1.02E-61 | -1.69E-46 |
| MS.gene059367 | MS.gene87890 | 0.820368 | 7.12E-53 | -1.69E-46 |
| MS.gene059368 | MS.gene87890 | 0.858988 | 5.64E-63 | -1.69E-46 |
| MS.gene059420 | MS.gene87890 | 0.839585 | 1.45E-57 | -1.69E-46 |
| MS.gene059455 | MS.gene87890 | 0.851935 | 6.42E-61 | -1.69E-46 |
| MS.gene059536 | MS.gene87890 | 0.846491 | 2.10E-59 | -1.69E-46 |
| MS.gene059597 | MS.gene87890 | 0.806201 | 9.23E-50 | -1.69E-46 |
| MS.gene059674 | MS.gene87890 | 0.822184 | 2.71E-53 | -1.69E-46 |
| MS.gene059676 | MS.gene87890 | 0.861058 | 1.34E-63 | -1.69E-46 |
| MS.gene059677 | MS.gene87890 | 0.80288 | 4.55E-49 | -1.69E-46 |
| MS.gene059688 | MS.gene87890 | 0.892505 | 1.49E-74 | -1.69E-46 |
| MS.gene059692 | MS.gene87890 | 0.890885 | 6.57E-74 | -1.69E-46 |
| MS.gene059695 | MS.gene87890 | 0.894231 | 3.00E-75 | -1.69E-46 |
| MS.gene059711 | MS.gene87890 | 0.848034 | 7.92E-60 | -1.69E-46 |
| MS.gene059718 | MS.gene87890 | 0.844113 | 9.24E-59 | -1.69E-46 |
| MS.gene059807 | MS.gene87890 | 0.810807 | 9.59E-51 | -1.69E-46 |
| MS.gene059902 | MS.gene87890 | 0.842139 | 3.10E-58 | -1.69E-46 |
| MS.gene059960 | MS.gene87890 | 0.847952 | 8.35E-60 | -1.69E-46 |
| MS.gene060193 | MS.gene87890 | 0.848672 | 5.28E-60 | -1.69E-46 |
| MS.gene060372 | MS.gene87890 | 0.805087 | 1.58E-49 | -1.69E-46 |
| MS.gene06037 | MS.gene87890 | 0.82011 | 8.16E-53 | -1.69E-46 |
| MS.gene060403 | MS.gene87890 | 0.869251 | 3.56E-66 | -1.69E-46 |
| MS.gene060482 | MS.gene87890 | 0.808861 | 2.52E-50 | -1.69E-46 |
| MS.gene060804 | MS.gene87890 | 0.891334 | 4.37E-74 | -1.69E-46 |
| MS.gene060818 | MS.gene87890 | 0.825178 | 5.40E-54 | -1.69E-46 |
| MS.gene060835 | MS.gene87890 | 0.89397 | 3.82E-75 | -1.69E-46 |
| MS.gene060837 | MS.gene87890 | 0.882096 | 1.39E-70 | -1.69E-46 |
| MS.gene06092 | MS.gene87890 | 0.857021 | 2.17E-62 | -1.69E-46 |
| MS.gene061041 | MS.gene87890 | 0.87853 | 2.61E-69 | -1.69E-46 |
| MS.gene061049 | MS.gene87890 | 0.831914 | 1.27E-55 | -1.69E-46 |
| MS.gene061051 | MS.gene87890 | -0.849218 | 3.72E-60 | -1.69E-46 |
| MS.gene061154 | MS.gene87890 | 0.864979 | 8.23E-65 | -1.69E-46 |
| MS.gene061200 | MS.gene87890 | 0.868687 | 5.42E-66 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87890.t1 | MTR_1g061850 | 100.000 | 141 | 0 | 0 | 32 | 172 | 117 | 257 | 2.33e-101 | 292 |
| MS.gene87890.t1 | MTR_3g115970 | 39.306 | 173 | 77 | 4 | 14 | 158 | 53 | 225 | 2.36e-28 | 105 |
| MS.gene87890.t1 | MTR_5g008680 | 35.664 | 143 | 75 | 5 | 25 | 159 | 367 | 500 | 5.51e-17 | 77.8 |
| MS.gene87890.t1 | MTR_4g094785 | 36.364 | 154 | 74 | 6 | 17 | 157 | 96 | 238 | 1.72e-16 | 74.3 |
| MS.gene87890.t1 | MTR_4g032680 | 35.484 | 124 | 66 | 5 | 40 | 158 | 755 | 869 | 1.39e-15 | 73.9 |
| MS.gene87890.t1 | MTR_4g032680 | 35.484 | 124 | 66 | 5 | 40 | 158 | 755 | 869 | 1.39e-15 | 73.9 |
| MS.gene87890.t1 | MTR_4g032680 | 35.484 | 124 | 66 | 5 | 40 | 158 | 646 | 760 | 1.85e-15 | 73.6 |
| MS.gene87890.t1 | MTR_4g032680 | 35.484 | 124 | 66 | 5 | 40 | 158 | 546 | 660 | 2.50e-15 | 73.2 |
| MS.gene87890.t1 | MTR_8g080980 | 39.474 | 114 | 58 | 5 | 47 | 157 | 37 | 142 | 1.40e-14 | 70.9 |
| MS.gene87890.t1 | MTR_1g061080 | 37.607 | 117 | 64 | 4 | 36 | 146 | 65 | 178 | 8.05e-14 | 67.0 |
| MS.gene87890.t1 | MTR_8g012340 | 41.053 | 95 | 46 | 4 | 65 | 157 | 58 | 144 | 1.67e-13 | 67.8 |
| MS.gene87890.t1 | MTR_7g053470 | 37.895 | 95 | 49 | 4 | 65 | 157 | 52 | 138 | 1.27e-12 | 65.1 |
| MS.gene87890.t1 | MTR_8g107010 | 32.308 | 130 | 68 | 5 | 45 | 162 | 134 | 255 | 4.42e-12 | 62.8 |
| MS.gene87890.t1 | MTR_8g091410 | 35.075 | 134 | 66 | 5 | 38 | 158 | 81 | 206 | 6.68e-12 | 61.6 |
| MS.gene87890.t1 | MTR_4g068190 | 33.117 | 154 | 80 | 6 | 17 | 155 | 73 | 218 | 6.67e-11 | 59.3 |
| MS.gene87890.t1 | MTR_8g038785 | 46.269 | 67 | 32 | 2 | 92 | 157 | 213 | 276 | 7.28e-11 | 60.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87890.t1 | AT3G10060 | 87.234 | 141 | 18 | 0 | 32 | 172 | 90 | 230 | 3.43e-90 | 263 |
| MS.gene87890.t1 | AT1G20810 | 36.782 | 174 | 79 | 5 | 18 | 162 | 58 | 229 | 8.10e-26 | 99.0 |
| MS.gene87890.t1 | AT5G05420 | 39.130 | 115 | 61 | 3 | 47 | 159 | 36 | 143 | 1.86e-17 | 75.1 |
| MS.gene87890.t1 | AT4G25340 | 37.600 | 125 | 64 | 5 | 40 | 159 | 362 | 477 | 9.97e-16 | 74.3 |
| MS.gene87890.t1 | AT5G45680 | 38.519 | 135 | 62 | 5 | 35 | 156 | 79 | 205 | 1.46e-15 | 71.6 |
| MS.gene87890.t1 | AT3G12340 | 39.344 | 122 | 60 | 5 | 43 | 159 | 387 | 499 | 3.55e-15 | 72.8 |
| MS.gene87890.t1 | AT3G12340 | 39.344 | 122 | 60 | 5 | 43 | 159 | 266 | 378 | 4.02e-15 | 72.0 |
| MS.gene87890.t1 | AT3G12340 | 39.344 | 122 | 60 | 5 | 43 | 159 | 266 | 378 | 4.02e-15 | 72.0 |
| MS.gene87890.t1 | AT5G48570 | 41.053 | 95 | 46 | 4 | 65 | 157 | 65 | 151 | 1.03e-14 | 71.2 |
| MS.gene87890.t1 | AT3G25230 | 38.462 | 117 | 61 | 5 | 43 | 156 | 34 | 142 | 2.03e-14 | 70.5 |
| MS.gene87890.t1 | AT3G25230 | 38.462 | 117 | 61 | 5 | 43 | 156 | 34 | 142 | 2.52e-14 | 70.1 |
| MS.gene87890.t1 | AT4G39710 | 36.842 | 133 | 65 | 4 | 38 | 158 | 85 | 210 | 1.06e-13 | 66.6 |
| MS.gene87890.t1 | AT4G39710 | 36.842 | 133 | 65 | 4 | 38 | 158 | 85 | 210 | 1.06e-13 | 66.6 |
| MS.gene87890.t1 | AT4G19830 | 32.743 | 113 | 67 | 4 | 40 | 146 | 78 | 187 | 2.87e-13 | 65.9 |
| MS.gene87890.t1 | AT1G18170 | 28.977 | 176 | 96 | 7 | 5 | 162 | 82 | 246 | 7.47e-12 | 62.0 |
| MS.gene87890.t1 | AT2G43560 | 37.288 | 118 | 60 | 4 | 44 | 155 | 47 | 156 | 1.84e-11 | 59.7 |
| MS.gene87890.t1 | AT2G43560 | 37.288 | 118 | 60 | 4 | 44 | 155 | 103 | 212 | 1.89e-11 | 60.8 |
Find 56 sgRNAs with CRISPR-Local
Find 181 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAATCACTTTCAGGAATTT+TGG | 0.132496 | 1.2:-47209973 | None:intergenic |
| GCGAGAGGAAATGTCTTAAA+AGG | 0.252599 | 1.2:+47210942 | MS.gene87890:CDS |
| TTCACCTCTATTGTTGCATT+TGG | 0.284032 | 1.2:-47211441 | None:intergenic |
| TTGCATTTGGAGGAATTTCT+TGG | 0.301411 | 1.2:-47211428 | None:intergenic |
| AGATTCACTATGTTGCTAAA+TGG | 0.324207 | 1.2:+47210615 | MS.gene87890:intron |
| TTAGCCTTCAACAATCTTTA+CGG | 0.335766 | 1.2:-47212162 | None:intergenic |
| AGGAAATGTCTTAAAAGGTT+TGG | 0.350382 | 1.2:+47210947 | MS.gene87890:CDS |
| GCCATCAAACAAAGTCCATT+TGG | 0.355516 | 1.2:+47212052 | MS.gene87890:CDS |
| CCCAAATGGACTTTGTTTGA+TGG | 0.357206 | 1.2:-47212053 | None:intergenic |
| GAAGTTACTGGTGAAGAGAT+TGG | 0.370959 | 1.2:-47209102 | None:intergenic |
| CTGCTTCCGTAGGCAAGTTC+AGG | 0.381510 | 1.2:-47211399 | None:intergenic |
| CTGAACTTGCCTACGGAAGC+AGG | 0.393211 | 1.2:+47211400 | MS.gene87890:CDS |
| ACCTCTATTGTTGCATTTGG+AGG | 0.402774 | 1.2:-47211438 | None:intergenic |
| CCATCAAACAAAGTCCATTT+GGG | 0.414715 | 1.2:+47212053 | MS.gene87890:CDS |
| GAAACCATTACTTACCCAAA+TGG | 0.439957 | 1.2:-47212067 | None:intergenic |
| GTCTTAAAAGGTTTGGATGT+AGG | 0.449657 | 1.2:+47210954 | MS.gene87890:CDS |
| AGACAAGGAATGGGTGTTGG+AGG | 0.450682 | 1.2:+47210662 | MS.gene87890:CDS |
| GTTCAGGTACTATGATTTGA+AGG | 0.462265 | 1.2:+47210389 | MS.gene87890:intron |
| CATGACTAGTAGACAAGGAA+TGG | 0.471106 | 1.2:+47210652 | MS.gene87890:CDS |
| TATACTTACTTGAGACCATT+GGG | 0.478333 | 1.2:-47210005 | None:intergenic |
| GGAGTAGAGGGCATGCGAGT+TGG | 0.478765 | 1.2:+47210975 | MS.gene87890:CDS |
| ATATACTTACTTGAGACCAT+TGG | 0.481885 | 1.2:-47210006 | None:intergenic |
| GTAGAGGGCATGCGAGTTGG+AGG | 0.484472 | 1.2:+47210978 | MS.gene87890:CDS |
| TCCTCCAAATGCAACAATAG+AGG | 0.487414 | 1.2:+47211437 | MS.gene87890:CDS |
| AGGTACTATGATTTGAAGGT+TGG | 0.487515 | 1.2:+47210393 | MS.gene87890:intron |
| GGTTTGGATGTAGGAGTAGA+GGG | 0.508312 | 1.2:+47210963 | MS.gene87890:CDS |
| GGGCATGCGAGTTGGAGGCC+AGG | 0.512087 | 1.2:+47210983 | MS.gene87890:CDS |
| CAGCCCTACGGATTTGATGT+AGG | 0.512577 | 1.2:+47210912 | MS.gene87890:intron |
| TGGATGTGAGAGTGCAATGA+AGG | 0.512937 | 1.2:-47209082 | None:intergenic |
| CAAAGAACAGAACAATATCA+TGG | 0.514026 | 1.2:+47209022 | MS.gene87890:intron |
| GATTTCAAAACTTTGCCCAA+TGG | 0.533176 | 1.2:+47209990 | MS.gene87890:CDS |
| CAAGGAATGGGTGTTGGAGG+AGG | 0.537182 | 1.2:+47210665 | MS.gene87890:CDS |
| CACTATGTTGCTAAATGGAG+GGG | 0.538954 | 1.2:+47210620 | MS.gene87890:CDS |
| TTGGACTCCCCTGCTTCCGT+AGG | 0.542189 | 1.2:-47211409 | None:intergenic |
| TTTAAATGATTGCAGCCCTA+CGG | 0.545676 | 1.2:+47210900 | MS.gene87890:intron |
| ACTGCCGTAAAGATTGTTGA+AGG | 0.549452 | 1.2:+47212158 | MS.gene87890:CDS |
| AGGTTTGGATGTAGGAGTAG+AGG | 0.549659 | 1.2:+47210962 | MS.gene87890:CDS |
| GGAGTGAAGGATGGTGATGA+TGG | 0.550644 | 1.2:-47209061 | None:intergenic |
| TTCACTATGTTGCTAAATGG+AGG | 0.551720 | 1.2:+47210618 | MS.gene87890:CDS |
| ATGACTAGTAGACAAGGAAT+GGG | 0.556838 | 1.2:+47210653 | MS.gene87890:CDS |
| TGAACTTGCCTACGGAAGCA+GGG | 0.563684 | 1.2:+47211401 | MS.gene87890:CDS |
| TGCAATGAAGGAGTGAAGGA+TGG | 0.565510 | 1.2:-47209070 | None:intergenic |
| TCCTTGTCTACTAGTCATGA+AGG | 0.569260 | 1.2:-47210648 | None:intergenic |
| AGTAGACAAGGAATGGGTGT+TGG | 0.572841 | 1.2:+47210659 | MS.gene87890:CDS |
| TCACTATGTTGCTAAATGGA+GGG | 0.574035 | 1.2:+47210619 | MS.gene87890:CDS |
| GTTCCTCCTGAACTTGCCTA+CGG | 0.574975 | 1.2:+47211393 | MS.gene87890:CDS |
| AGAGTGCAATGAAGGAGTGA+AGG | 0.585916 | 1.2:-47209074 | None:intergenic |
| TATGATTTGAAGGTTGGCGA+TGG | 0.588743 | 1.2:+47210399 | MS.gene87890:CDS |
| AATGGGTGTTGGAGGAGGAA+CGG | 0.601229 | 1.2:+47210670 | MS.gene87890:CDS |
| TTCGCCTACATCAAATCCGT+AGG | 0.612715 | 1.2:-47210916 | None:intergenic |
| CTTCCGTAGGCAAGTTCAGG+AGG | 0.618678 | 1.2:-47211396 | None:intergenic |
| GAACTTGCCTACGGAAGCAG+GGG | 0.635852 | 1.2:+47211402 | MS.gene87890:CDS |
| TCGCCTACATCAAATCCGTA+GGG | 0.638693 | 1.2:-47210915 | None:intergenic |
| GATGGAGCTGAAGCTGTGAA+AGG | 0.645046 | 1.2:+47210417 | MS.gene87890:CDS |
| ACCTTCATGACTAGTAGACA+AGG | 0.648553 | 1.2:+47210647 | MS.gene87890:CDS |
| GATGTAGGCGAATCTGCGAG+AGG | 0.684048 | 1.2:+47210927 | MS.gene87890:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAATATATTCAATTTATG+TGG | - | chr1.2:47211543-47211562 | None:intergenic | 10.0% |
| !!! | AAATTTAACAACATTTTAAA+TGG | - | chr1.2:47209851-47209870 | None:intergenic | 10.0% |
| !!! | AATTTAACAACATTTTAAAT+GGG | - | chr1.2:47209850-47209869 | None:intergenic | 10.0% |
| !!! | TTTATTTTTTATTTATGATG+TGG | - | chr1.2:47209544-47209563 | None:intergenic | 10.0% |
| !! | ATATGCTTTATAATCTTAAT+AGG | - | chr1.2:47208782-47208801 | None:intergenic | 15.0% |
| !! | ATTTGATTAACAGATATAAT+AGG | + | chr1.2:47209687-47209706 | MS.gene87890:intron | 15.0% |
| !! | TTTACAACAAAAATTCAAAT+AGG | + | chr1.2:47209231-47209250 | MS.gene87890:intron | 15.0% |
| !!! | ATATTTATTTTTCTCTAGTT+TGG | - | chr1.2:47208964-47208983 | None:intergenic | 15.0% |
| !!! | ATGTTATTTGAATATCAATT+TGG | + | chr1.2:47209591-47209610 | MS.gene87890:intron | 15.0% |
| !!! | TGTTATTTGAATATCAATTT+GGG | + | chr1.2:47209592-47209611 | MS.gene87890:intron | 15.0% |
| !! | AAATCATGAATATCAGTAAA+TGG | + | chr1.2:47211061-47211080 | MS.gene87890:intron | 20.0% |
| !! | AACTCATAACAATCAATTAA+AGG | - | chr1.2:47210730-47210749 | None:intergenic | 20.0% |
| !! | AAGATATATAAAGCTAGTTA+GGG | + | chr1.2:47210340-47210359 | MS.gene87890:intron | 20.0% |
| !! | ATCCATAATCAATAAATGTA+GGG | - | chr1.2:47211924-47211943 | None:intergenic | 20.0% |
| !! | CTTAAAATAAATGTACTTCT+AGG | - | chr1.2:47210191-47210210 | None:intergenic | 20.0% |
| !! | CTTAGAATTATAAGATTCTT+AGG | + | chr1.2:47209422-47209441 | MS.gene87890:intron | 20.0% |
| !! | TAAAATAGATATGATGATAC+AGG | + | chr1.2:47210155-47210174 | MS.gene87890:intron | 20.0% |
| !! | TAAGATATATAAAGCTAGTT+AGG | + | chr1.2:47210339-47210358 | MS.gene87890:intron | 20.0% |
| !! | TATATGTAGTATCAAATTAC+AGG | - | chr1.2:47211474-47211493 | None:intergenic | 20.0% |
| !! | TGCTTCAAAAATAAAAATTG+TGG | + | chr1.2:47208884-47208903 | MS.gene87890:intron | 20.0% |
| !! | TTAAAGATGCAAAATTTACA+AGG | + | chr1.2:47211235-47211254 | MS.gene87890:intron | 20.0% |
| !! | TTATATATCAGTCATAAGTA+TGG | + | chr1.2:47208627-47208646 | MS.gene87890:intron | 20.0% |
| !! | TTGTAAAAATCACAAACAAA+CGG | + | chr1.2:47208600-47208619 | MS.gene87890:intron | 20.0% |
| !!! | AATTATGCTTTTCTTGTTTT+TGG | + | chr1.2:47209930-47209949 | MS.gene87890:intron | 20.0% |
| !!! | ACTTTATTAACGACAATTTT+AGG | - | chr1.2:47209751-47209770 | None:intergenic | 20.0% |
| !!! | AGAATGATTATTTCTTTTGA+TGG | - | chr1.2:47211787-47211806 | None:intergenic | 20.0% |
| !!! | GTAGTTAATTTCAATGATTT+TGG | + | chr1.2:47212125-47212144 | MS.gene87890:intron | 20.0% |
| !!! | GTATCATCATATCTATTTTA+AGG | - | chr1.2:47210155-47210174 | None:intergenic | 20.0% |
| !!! | TGTAAATTTTGCATCTTTAA+AGG | - | chr1.2:47211235-47211254 | None:intergenic | 20.0% |
| !!! | TTATGCAAAATTTTCTTGTT+GGG | + | chr1.2:47210861-47210880 | MS.gene87890:intron | 20.0% |
| !!! | TTTATGCAAAATTTTCTTGT+TGG | + | chr1.2:47210860-47210879 | MS.gene87890:intron | 20.0% |
| ! | AACATAGTGAATCTACAATA+TGG | - | chr1.2:47210609-47210628 | None:intergenic | 25.0% |
| ! | AATGAACAACTACATTGAAT+TGG | + | chr1.2:47211103-47211122 | MS.gene87890:intron | 25.0% |
| ! | ACTAATGAAACTAAAGTCAT+AGG | - | chr1.2:47210242-47210261 | None:intergenic | 25.0% |
| ! | AGTATATAAGATGCAGAATT+AGG | - | chr1.2:47211950-47211969 | None:intergenic | 25.0% |
| ! | ATAGTATGATTCTTGTGATA+TGG | - | chr1.2:47211508-47211527 | None:intergenic | 25.0% |
| ! | ATGAAATTTGTAACAGAACA+AGG | - | chr1.2:47211039-47211058 | None:intergenic | 25.0% |
| ! | ATTGATTGTTATGAGTTAAC+AGG | + | chr1.2:47210733-47210752 | MS.gene87890:intron | 25.0% |
| ! | ATTTGTAAAGACATAGAGAT+TGG | - | chr1.2:47209308-47209327 | None:intergenic | 25.0% |
| ! | GATCCATAATCAATAAATGT+AGG | - | chr1.2:47211925-47211944 | None:intergenic | 25.0% |
| ! | TATTCATTAGTCATTTGAGT+CGG | - | chr1.2:47210095-47210114 | None:intergenic | 25.0% |
| ! | TCCATAATCAATAAATGTAG+GGG | - | chr1.2:47211923-47211942 | None:intergenic | 25.0% |
| ! | TCTATGTCTTTACAAATTGA+AGG | + | chr1.2:47209311-47209330 | MS.gene87890:intron | 25.0% |
| ! | TGTAAAAATCACAAACAAAC+GGG | + | chr1.2:47208601-47208620 | MS.gene87890:intron | 25.0% |
| !! | ATTTTCACCTTTGTAACTTT+CGG | + | chr1.2:47212004-47212023 | MS.gene87890:intron | 25.0% |
| !! | CACAATGTATAAATCTTTTG+AGG | + | chr1.2:47210830-47210849 | MS.gene87890:intron | 25.0% |
| !! | CTACGACAACATTTTAAATA+TGG | + | chr1.2:47209629-47209648 | MS.gene87890:intron | 25.0% |
| !! | TATGCAAAATTTTCTTGTTG+GGG | + | chr1.2:47210862-47210881 | MS.gene87890:intron | 25.0% |
| !! | TCTTTTTAGATATCTAGAGA+CGG | - | chr1.2:47211753-47211772 | None:intergenic | 25.0% |
| !! | TTCATTTTGTAATCAGTTAC+TGG | + | chr1.2:47208659-47208678 | MS.gene87890:intron | 25.0% |
| !! | TTTAAAATGTTGTCGTAGTT+AGG | - | chr1.2:47209627-47209646 | None:intergenic | 25.0% |
| !!! | AAAATTAGTTCTTTTTCTGC+CGG | + | chr1.2:47211857-47211876 | MS.gene87890:intron | 25.0% |
| !!! | AAAGTTTTGAAATCACTTTC+AGG | - | chr1.2:47209984-47210003 | None:intergenic | 25.0% |
| AAATATGTTTCGCTCATTAG+TGG | + | chr1.2:47210472-47210491 | MS.gene87890:intron | 30.0% | |
| AGATTCACTATGTTGCTAAA+TGG | + | chr1.2:47210615-47210634 | MS.gene87890:intron | 30.0% | |
| AGGAAATGTCTTAAAAGGTT+TGG | + | chr1.2:47210947-47210966 | MS.gene87890:CDS | 30.0% | |
| ATATACTTACTTGAGACCAT+TGG | - | chr1.2:47210009-47210028 | None:intergenic | 30.0% | |
| ATGAAATCAACTAGAAAAGC+CGG | - | chr1.2:47210315-47210334 | None:intergenic | 30.0% | |
| CAAAGAACAGAACAATATCA+TGG | + | chr1.2:47209022-47209041 | MS.gene87890:intron | 30.0% | |
| CGTTAATAAAGTTCGTTTGA+CGG | + | chr1.2:47209759-47209778 | MS.gene87890:intron | 30.0% | |
| CTCTAATTGATCAAATTCCT+TGG | + | chr1.2:47211609-47211628 | MS.gene87890:intron | 30.0% | |
| GATTGGATTATTGACATTGA+TGG | - | chr1.2:47208818-47208837 | None:intergenic | 30.0% | |
| GCAAAATTTACAAGGAAGTT+GGG | + | chr1.2:47211243-47211262 | MS.gene87890:intron | 30.0% | |
| TAACTAACTAACATGTTGTG+AGG | - | chr1.2:47209361-47209380 | None:intergenic | 30.0% | |
| TATACTTACTTGAGACCATT+GGG | - | chr1.2:47210008-47210027 | None:intergenic | 30.0% | |
| TGCAAAATTTACAAGGAAGT+TGG | + | chr1.2:47211242-47211261 | MS.gene87890:intron | 30.0% | |
| TGTAATCTTGAAACTTTCAC+CGG | + | chr1.2:47210293-47210312 | MS.gene87890:intron | 30.0% | |
| TGTCTTTACAAATTGAAGGA+AGG | + | chr1.2:47209315-47209334 | MS.gene87890:intron | 30.0% | |
| TTGATCAATTAGAGTTGTTG+TGG | - | chr1.2:47211603-47211622 | None:intergenic | 30.0% | |
| ! | GAAATCACTTTCAGGAATTT+TGG | - | chr1.2:47209976-47209995 | None:intergenic | 30.0% |
| ! | TATTTTATGTGATCAGTTGC+TGG | + | chr1.2:47209461-47209480 | MS.gene87890:intron | 30.0% |
| ! | TCCCCTACATTTATTGATTA+TGG | + | chr1.2:47211919-47211938 | MS.gene87890:intron | 30.0% |
| ! | TTAGCCTTCAACAATCTTTA+CGG | - | chr1.2:47212165-47212184 | None:intergenic | 30.0% |
| !! | AGTACACTAGTCTTTAGTTA+GGG | + | chr1.2:47210259-47210278 | MS.gene87890:intron | 30.0% |
| !! | CAGGACTTTAAAATTTGGAT+TGG | - | chr1.2:47208835-47208854 | None:intergenic | 30.0% |
| !! | TAGTACACTAGTCTTTAGTT+AGG | + | chr1.2:47210258-47210277 | MS.gene87890:intron | 30.0% |
| !!! | CAATCCAAATTTTAAAGTCC+TGG | + | chr1.2:47208833-47208852 | MS.gene87890:intron | 30.0% |
| AAATTTACAAGGAAGTTGGG+AGG | + | chr1.2:47211246-47211265 | MS.gene87890:intron | 35.0% | |
| AAGTCCATTTGGGTAAGTAA+TGG | + | chr1.2:47212063-47212082 | MS.gene87890:intron | 35.0% | |
| AATTTACAAGGAAGTTGGGA+GGG | + | chr1.2:47211247-47211266 | MS.gene87890:intron | 35.0% | |
| AGGTACTATGATTTGAAGGT+TGG | + | chr1.2:47210393-47210412 | MS.gene87890:intron | 35.0% | |
| AGGTCCAAATTTAACTGTCT+AGG | - | chr1.2:47211215-47211234 | None:intergenic | 35.0% | |
| AGTCCCTAGACAGTTAAATT+TGG | + | chr1.2:47211208-47211227 | MS.gene87890:intron | 35.0% | |
| ATGACTAGTAGACAAGGAAT+GGG | + | chr1.2:47210653-47210672 | MS.gene87890:CDS | 35.0% | |
| CAGTTAAACTGATTGAACCT+TGG | - | chr1.2:47211690-47211709 | None:intergenic | 35.0% | |
| CCATCAAACAAAGTCCATTT+GGG | + | chr1.2:47212053-47212072 | MS.gene87890:CDS | 35.0% | |
| CTGAATTGTCTTAACAACAC+AGG | + | chr1.2:47209194-47209213 | MS.gene87890:intron | 35.0% | |
| CTTGTGATATGGAGCTAAAA+TGG | - | chr1.2:47211497-47211516 | None:intergenic | 35.0% | |
| GAAACCATTACTTACCCAAA+TGG | - | chr1.2:47212070-47212089 | None:intergenic | 35.0% | |
| GACAAAACTCTGATATGTTC+AGG | + | chr1.2:47210373-47210392 | MS.gene87890:intron | 35.0% | |
| GAGAAAGAGAATATAGAGTG+AGG | - | chr1.2:47208929-47208948 | None:intergenic | 35.0% | |
| GATTTCAAAACTTTGCCCAA+TGG | + | chr1.2:47209990-47210009 | MS.gene87890:CDS | 35.0% | |
| GGTCCAAATTTAACTGTCTA+GGG | - | chr1.2:47211214-47211233 | None:intergenic | 35.0% | |
| GGTTCAATCAGTTTAACTGA+AGG | + | chr1.2:47211691-47211710 | MS.gene87890:intron | 35.0% | |
| GGTTCTTCCATGTATAAACA+AGG | + | chr1.2:47210754-47210773 | MS.gene87890:intron | 35.0% | |
| GTCTTAAAAGGTTTGGATGT+AGG | + | chr1.2:47210954-47210973 | MS.gene87890:CDS | 35.0% | |
| GTTCAGGTACTATGATTTGA+AGG | + | chr1.2:47210389-47210408 | MS.gene87890:intron | 35.0% | |
| TCACTATGTTGCTAAATGGA+GGG | + | chr1.2:47210619-47210638 | MS.gene87890:CDS | 35.0% | |
| TGCTAACTCAGAAATGGAAA+TGG | - | chr1.2:47211643-47211662 | None:intergenic | 35.0% | |
| TGGAAATGGTAATTAAGCCA+AGG | - | chr1.2:47211629-47211648 | None:intergenic | 35.0% | |
| TTAGATATCTAGAGACGGAA+GGG | - | chr1.2:47211748-47211767 | None:intergenic | 35.0% | |
| TTCACCTCTATTGTTGCATT+TGG | - | chr1.2:47211444-47211463 | None:intergenic | 35.0% | |
| TTCACTATGTTGCTAAATGG+AGG | + | chr1.2:47210618-47210637 | MS.gene87890:CDS | 35.0% | |
| TTGCATTTGGAGGAATTTCT+TGG | - | chr1.2:47211431-47211450 | None:intergenic | 35.0% | |
| TTTAAATGATTGCAGCCCTA+CGG | + | chr1.2:47210900-47210919 | MS.gene87890:intron | 35.0% | |
| TTTAGATATCTAGAGACGGA+AGG | - | chr1.2:47211749-47211768 | None:intergenic | 35.0% | |
| TTTCCATTTCTGAGTTAGCA+AGG | + | chr1.2:47211643-47211662 | MS.gene87890:intron | 35.0% | |
| ! | ATTTAGTTGACTTTCTGCAG+CGG | + | chr1.2:47211361-47211380 | MS.gene87890:intron | 35.0% |
| ! | GAATTTTCTACCGTCTACTT+TGG | + | chr1.2:47210066-47210085 | MS.gene87890:intron | 35.0% |
| ! | TAGAGTTGTTGTGGTGTTAA+TGG | - | chr1.2:47211594-47211613 | None:intergenic | 35.0% |
| ! | TCAATGATTTTGGATTCTGC+AGG | + | chr1.2:47212135-47212154 | MS.gene87890:intron | 35.0% |
| ! | TTGAATATCAATTTGGGACG+CGG | + | chr1.2:47209598-47209617 | MS.gene87890:intron | 35.0% |
| !! | CACTCCAGGACTTTAAAATT+TGG | - | chr1.2:47208840-47208859 | None:intergenic | 35.0% |
| !! | GAACATGCCTTGTTTATACA+TGG | - | chr1.2:47210764-47210783 | None:intergenic | 35.0% |
| !! | TAGATTTTAGCCGAGTTACT+TGG | - | chr1.2:47210702-47210721 | None:intergenic | 35.0% |
| !! | TGGTTCTACAACAGTTTTGT+TGG | - | chr1.2:47209288-47209307 | None:intergenic | 35.0% |
| !!! | TTCTACAACAGTTTTGTTGG+AGG | - | chr1.2:47209285-47209304 | None:intergenic | 35.0% |
| AACTCCGAGTTATATGAGTC+AGG | - | chr1.2:47210519-47210538 | None:intergenic | 40.0% | |
| ACCTCTATTGTTGCATTTGG+AGG | - | chr1.2:47211441-47211460 | None:intergenic | 40.0% | |
| ACCTTCATGACTAGTAGACA+AGG | + | chr1.2:47210647-47210666 | MS.gene87890:CDS | 40.0% | |
| ACTGCCGTAAAGATTGTTGA+AGG | + | chr1.2:47212158-47212177 | MS.gene87890:CDS | 40.0% | |
| ATAGAGTGAGGATAACGTAG+TGG | - | chr1.2:47208917-47208936 | None:intergenic | 40.0% | |
| ATGTGCATCTGAACTCATGT+TGG | + | chr1.2:47211882-47211901 | MS.gene87890:intron | 40.0% | |
| CACTATGTTGCTAAATGGAG+GGG | + | chr1.2:47210620-47210639 | MS.gene87890:CDS | 40.0% | |
| CAGACCTGACTCATATAACT+CGG | + | chr1.2:47210512-47210531 | MS.gene87890:intron | 40.0% | |
| CATAGAACTTTACTCACTCC+AGG | - | chr1.2:47208854-47208873 | None:intergenic | 40.0% | |
| CATGACTAGTAGACAAGGAA+TGG | + | chr1.2:47210652-47210671 | MS.gene87890:CDS | 40.0% | |
| GAAGTTACTGGTGAAGAGAT+TGG | - | chr1.2:47209105-47209124 | None:intergenic | 40.0% | |
| GCCATCAAACAAAGTCCATT+TGG | + | chr1.2:47212052-47212071 | MS.gene87890:CDS | 40.0% | |
| GCGAGAGGAAATGTCTTAAA+AGG | + | chr1.2:47210942-47210961 | MS.gene87890:CDS | 40.0% | |
| GTAGAGTTGAGAGAAGTTAC+TGG | - | chr1.2:47209117-47209136 | None:intergenic | 40.0% | |
| TAGATATCTAGAGACGGAAG+GGG | - | chr1.2:47211747-47211766 | None:intergenic | 40.0% | |
| TATGATTTGAAGGTTGGCGA+TGG | + | chr1.2:47210399-47210418 | MS.gene87890:CDS | 40.0% | |
| TCCTCCAAATGCAACAATAG+AGG | + | chr1.2:47211437-47211456 | MS.gene87890:CDS | 40.0% | |
| TCCTTGTCTACTAGTCATGA+AGG | - | chr1.2:47210651-47210670 | None:intergenic | 40.0% | |
| TGAGTTCAGATGCACATAAC+CGG | - | chr1.2:47211879-47211898 | None:intergenic | 40.0% | |
| TGGAGTTTATGCATGTGATG+TGG | + | chr1.2:47209481-47209500 | MS.gene87890:intron | 40.0% | |
| ! | CCCAAATGGACTTTGTTTGA+TGG | - | chr1.2:47212056-47212075 | None:intergenic | 40.0% |
| !!! | TTTGGTTTTCTGCAGCTAAG+AGG | + | chr1.2:47209948-47209967 | MS.gene87890:intron | 40.0% |
| ACGGTACGATCCAAGTAACT+CGG | + | chr1.2:47210689-47210708 | MS.gene87890:intron | 45.0% | |
| AGAGTGCAATGAAGGAGTGA+AGG | - | chr1.2:47209077-47209096 | None:intergenic | 45.0% | |
| AGGTTTGGATGTAGGAGTAG+AGG | + | chr1.2:47210962-47210981 | MS.gene87890:CDS | 45.0% | |
| AGTAGACAAGGAATGGGTGT+TGG | + | chr1.2:47210659-47210678 | MS.gene87890:CDS | 45.0% | |
| CAAGGCGAATTTGTCTCCTT+TGG | + | chr1.2:47211661-47211680 | MS.gene87890:intron | 45.0% | |
| CTGCAGTCCGAAAGTTACAA+AGG | - | chr1.2:47212014-47212033 | None:intergenic | 45.0% | |
| GAACTCATGTTGGCAGGAAA+AGG | + | chr1.2:47211892-47211911 | MS.gene87890:intron | 45.0% | |
| GAAGAATGTGAACAGCTGCA+TGG | - | chr1.2:47209263-47209282 | None:intergenic | 45.0% | |
| GAGTCGGTTACCAAAGTAGA+CGG | - | chr1.2:47210079-47210098 | None:intergenic | 45.0% | |
| GGTTTGGATGTAGGAGTAGA+GGG | + | chr1.2:47210963-47210982 | MS.gene87890:CDS | 45.0% | |
| TCGCCTACATCAAATCCGTA+GGG | - | chr1.2:47210918-47210937 | None:intergenic | 45.0% | |
| TCGCCTTGCTAACTCAGAAA+TGG | - | chr1.2:47211649-47211668 | None:intergenic | 45.0% | |
| TGCAATGAAGGAGTGAAGGA+TGG | - | chr1.2:47209073-47209092 | None:intergenic | 45.0% | |
| TGTAACTTTCGGACTGCAGA+TGG | + | chr1.2:47212015-47212034 | MS.gene87890:intron | 45.0% | |
| TTCGCCTACATCAAATCCGT+AGG | - | chr1.2:47210919-47210938 | None:intergenic | 45.0% | |
| TTTGTCTCCTTTGGACACCA+AGG | + | chr1.2:47211670-47211689 | MS.gene87890:intron | 45.0% | |
| ! | AGGAAGTTGGGAGGGATTTT+AGG | + | chr1.2:47211255-47211274 | MS.gene87890:intron | 45.0% |
| ! | TGGATGTGAGAGTGCAATGA+AGG | - | chr1.2:47209085-47209104 | None:intergenic | 45.0% |
| !! | GATTGAACCTTGGTGTCCAA+AGG | - | chr1.2:47211680-47211699 | None:intergenic | 45.0% |
| CAGCCCTACGGATTTGATGT+AGG | + | chr1.2:47210912-47210931 | MS.gene87890:intron | 50.0% | |
| GATGGAGCTGAAGCTGTGAA+AGG | + | chr1.2:47210417-47210436 | MS.gene87890:CDS | 50.0% | |
| GCATCTGAACTCATGTTGGC+AGG | + | chr1.2:47211886-47211905 | MS.gene87890:intron | 50.0% | |
| GTTCCTCCTGAACTTGCCTA+CGG | + | chr1.2:47211393-47211412 | MS.gene87890:CDS | 50.0% | |
| TGAACTTGCCTACGGAAGCA+GGG | + | chr1.2:47211401-47211420 | MS.gene87890:CDS | 50.0% | |
| TGCTAGAGTCACTTCTCACC+TGG | - | chr1.2:47211004-47211023 | None:intergenic | 50.0% | |
| TGGTTAATGCAGTTCACGCG+TGG | + | chr1.2:47209649-47209668 | MS.gene87890:intron | 50.0% | |
| ! | GGAGTGAAGGATGGTGATGA+TGG | - | chr1.2:47209064-47209083 | None:intergenic | 50.0% |
| !! | AATGGGTGTTGGAGGAGGAA+CGG | + | chr1.2:47210670-47210689 | MS.gene87890:CDS | 50.0% |
| !! | AGACAAGGAATGGGTGTTGG+AGG | + | chr1.2:47210662-47210681 | MS.gene87890:CDS | 50.0% |
| AAGGATCGCGTGTCGCAGTA+CGG | + | chr1.2:47210436-47210455 | MS.gene87890:intron | 55.0% | |
| CTAGAGACGGAAGGGGTAAG+TGG | - | chr1.2:47211740-47211759 | None:intergenic | 55.0% | |
| CTGAACTTGCCTACGGAAGC+AGG | + | chr1.2:47211400-47211419 | MS.gene87890:CDS | 55.0% | |
| CTGCTTCCGTAGGCAAGTTC+AGG | - | chr1.2:47211402-47211421 | None:intergenic | 55.0% | |
| CTTCCGTAGGCAAGTTCAGG+AGG | - | chr1.2:47211399-47211418 | None:intergenic | 55.0% | |
| GAACTTGCCTACGGAAGCAG+GGG | + | chr1.2:47211402-47211421 | MS.gene87890:CDS | 55.0% | |
| GATGTAGGCGAATCTGCGAG+AGG | + | chr1.2:47210927-47210946 | MS.gene87890:CDS | 55.0% | |
| !! | CAAGGAATGGGTGTTGGAGG+AGG | + | chr1.2:47210665-47210684 | MS.gene87890:CDS | 55.0% |
| GGCGACGCAGTTCACACATG+TGG | - | chr1.2:47209829-47209848 | None:intergenic | 60.0% | |
| TTGGACTCCCCTGCTTCCGT+AGG | - | chr1.2:47211412-47211431 | None:intergenic | 60.0% | |
| ! | GGAGTAGAGGGCATGCGAGT+TGG | + | chr1.2:47210975-47210994 | MS.gene87890:CDS | 60.0% |
| ! | GTAGAGGGCATGCGAGTTGG+AGG | + | chr1.2:47210978-47210997 | MS.gene87890:CDS | 60.0% |
| ! | GGGCATGCGAGTTGGAGGCC+AGG | + | chr1.2:47210983-47211002 | MS.gene87890:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 47208515 | 47212184 | 47208515 | ID=MS.gene87890 |
| chr1.2 | mRNA | 47208515 | 47212184 | 47208515 | ID=MS.gene87890.t1;Parent=MS.gene87890 |
| chr1.2 | exon | 47208515 | 47208522 | 47208515 | ID=MS.gene87890.t1.exon1;Parent=MS.gene87890.t1 |
| chr1.2 | CDS | 47208515 | 47208522 | 47208515 | ID=cds.MS.gene87890.t1;Parent=MS.gene87890.t1 |
| chr1.2 | exon | 47209032 | 47209116 | 47209032 | ID=MS.gene87890.t1.exon2;Parent=MS.gene87890.t1 |
| chr1.2 | CDS | 47209032 | 47209116 | 47209032 | ID=cds.MS.gene87890.t1;Parent=MS.gene87890.t1 |
| chr1.2 | exon | 47209963 | 47210018 | 47209963 | ID=MS.gene87890.t1.exon3;Parent=MS.gene87890.t1 |
| chr1.2 | CDS | 47209963 | 47210018 | 47209963 | ID=cds.MS.gene87890.t1;Parent=MS.gene87890.t1 |
| chr1.2 | exon | 47210395 | 47210452 | 47210395 | ID=MS.gene87890.t1.exon4;Parent=MS.gene87890.t1 |
| chr1.2 | CDS | 47210395 | 47210452 | 47210395 | ID=cds.MS.gene87890.t1;Parent=MS.gene87890.t1 |
| chr1.2 | exon | 47210617 | 47210691 | 47210617 | ID=MS.gene87890.t1.exon5;Parent=MS.gene87890.t1 |
| chr1.2 | CDS | 47210617 | 47210691 | 47210617 | ID=cds.MS.gene87890.t1;Parent=MS.gene87890.t1 |
| chr1.2 | exon | 47210915 | 47211004 | 47210915 | ID=MS.gene87890.t1.exon6;Parent=MS.gene87890.t1 |
| chr1.2 | CDS | 47210915 | 47211004 | 47210915 | ID=cds.MS.gene87890.t1;Parent=MS.gene87890.t1 |
| chr1.2 | exon | 47211381 | 47211458 | 47211381 | ID=MS.gene87890.t1.exon7;Parent=MS.gene87890.t1 |
| chr1.2 | CDS | 47211381 | 47211458 | 47211381 | ID=cds.MS.gene87890.t1;Parent=MS.gene87890.t1 |
| chr1.2 | exon | 47212034 | 47212074 | 47212034 | ID=MS.gene87890.t1.exon8;Parent=MS.gene87890.t1 |
| chr1.2 | CDS | 47212034 | 47212074 | 47212034 | ID=cds.MS.gene87890.t1;Parent=MS.gene87890.t1 |
| chr1.2 | exon | 47212157 | 47212184 | 47212157 | ID=MS.gene87890.t1.exon9;Parent=MS.gene87890.t1 |
| chr1.2 | CDS | 47212157 | 47212184 | 47212157 | ID=cds.MS.gene87890.t1;Parent=MS.gene87890.t1 |
| Gene Sequence |
| Protein sequence |
