Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47389.t1 | XP_003590415.2 | 95.4 | 238 | 9 | 2 | 1 | 237 | 21 | 257 | 7.10E-118 | 433.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47389.t1 | Q9SR70 | 69.8 | 222 | 65 | 1 | 16 | 237 | 11 | 230 | 2.5e-79 | 296.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47389.t1 | G7I9E0 | 95.4 | 238 | 9 | 2 | 1 | 237 | 21 | 257 | 5.1e-118 | 433.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene47389 | 0.88104 | 3.34E-70 | -1.69E-46 |
| MS.gene049171 | MS.gene47389 | 0.836355 | 9.82E-57 | -1.69E-46 |
| MS.gene049173 | MS.gene47389 | 0.816223 | 6.18E-52 | -1.69E-46 |
| MS.gene049217 | MS.gene47389 | 0.829599 | 4.70E-55 | -1.69E-46 |
| MS.gene049222 | MS.gene47389 | 0.871564 | 6.21E-67 | -1.69E-46 |
| MS.gene049285 | MS.gene47389 | 0.844412 | 7.68E-59 | -1.69E-46 |
| MS.gene049320 | MS.gene47389 | 0.849528 | 3.05E-60 | -1.69E-46 |
| MS.gene049351 | MS.gene47389 | 0.805006 | 1.64E-49 | -1.69E-46 |
| MS.gene049356 | MS.gene47389 | 0.851314 | 9.62E-61 | -1.69E-46 |
| MS.gene049369 | MS.gene47389 | 0.85842 | 8.34E-63 | -1.69E-46 |
| MS.gene049396 | MS.gene47389 | 0.849416 | 3.28E-60 | -1.69E-46 |
| MS.gene049427 | MS.gene47389 | 0.869821 | 2.32E-66 | -1.69E-46 |
| MS.gene049488 | MS.gene47389 | 0.815963 | 7.06E-52 | -1.69E-46 |
| MS.gene049609 | MS.gene47389 | 0.920179 | 1.77E-87 | -1.69E-46 |
| MS.gene049633 | MS.gene47389 | 0.815227 | 1.03E-51 | -1.69E-46 |
| MS.gene049661 | MS.gene47389 | 0.871022 | 9.38E-67 | -1.69E-46 |
| MS.gene049662 | MS.gene47389 | 0.860461 | 2.03E-63 | -1.69E-46 |
| MS.gene049805 | MS.gene47389 | 0.910986 | 1.01E-82 | -1.69E-46 |
| MS.gene050076 | MS.gene47389 | 0.807817 | 4.20E-50 | -1.69E-46 |
| MS.gene050163 | MS.gene47389 | 0.811927 | 5.48E-51 | -1.69E-46 |
| MS.gene050301 | MS.gene47389 | 0.803162 | 3.98E-49 | -1.69E-46 |
| MS.gene050333 | MS.gene47389 | 0.800565 | 1.36E-48 | -1.69E-46 |
| MS.gene050397 | MS.gene47389 | 0.821292 | 4.36E-53 | -1.69E-46 |
| MS.gene050432 | MS.gene47389 | 0.85296 | 3.28E-61 | -1.69E-46 |
| MS.gene050499 | MS.gene47389 | 0.816824 | 4.53E-52 | -1.69E-46 |
| MS.gene050502 | MS.gene47389 | 0.815621 | 8.41E-52 | -1.69E-46 |
| MS.gene050504 | MS.gene47389 | 0.811986 | 5.32E-51 | -1.69E-46 |
| MS.gene050518 | MS.gene47389 | 0.807493 | 4.92E-50 | -1.69E-46 |
| MS.gene050520 | MS.gene47389 | 0.815826 | 7.58E-52 | -1.69E-46 |
| MS.gene050529 | MS.gene47389 | 0.821363 | 4.20E-53 | -1.69E-46 |
| MS.gene050538 | MS.gene47389 | 0.857415 | 1.66E-62 | -1.69E-46 |
| MS.gene050577 | MS.gene47389 | 0.806686 | 7.29E-50 | -1.69E-46 |
| MS.gene050593 | MS.gene47389 | 0.901212 | 3.36E-78 | -1.69E-46 |
| MS.gene050625 | MS.gene47389 | 0.839899 | 1.20E-57 | -1.69E-46 |
| MS.gene050647 | MS.gene47389 | -0.802008 | 6.88E-49 | -1.69E-46 |
| MS.gene050662 | MS.gene47389 | 0.809584 | 1.76E-50 | -1.69E-46 |
| MS.gene050670 | MS.gene47389 | 0.909532 | 5.13E-82 | -1.69E-46 |
| MS.gene050686 | MS.gene47389 | 0.848841 | 4.74E-60 | -1.69E-46 |
| MS.gene050699 | MS.gene47389 | 0.822179 | 2.72E-53 | -1.69E-46 |
| MS.gene050747 | MS.gene47389 | 0.901076 | 3.86E-78 | -1.69E-46 |
| MS.gene050767 | MS.gene47389 | 0.824872 | 6.38E-54 | -1.69E-46 |
| MS.gene050770 | MS.gene47389 | 0.827758 | 1.31E-54 | -1.69E-46 |
| MS.gene050772 | MS.gene47389 | 0.920129 | 1.89E-87 | -1.69E-46 |
| MS.gene05080 | MS.gene47389 | 0.835154 | 1.98E-56 | -1.69E-46 |
| MS.gene050812 | MS.gene47389 | 0.800771 | 1.23E-48 | -1.69E-46 |
| MS.gene05081 | MS.gene47389 | 0.811773 | 5.92E-51 | -1.69E-46 |
| MS.gene050950 | MS.gene47389 | 0.895422 | 9.73E-76 | -1.69E-46 |
| MS.gene05100 | MS.gene47389 | 0.832514 | 9.05E-56 | -1.69E-46 |
| MS.gene05101 | MS.gene47389 | 0.809777 | 1.60E-50 | -1.69E-46 |
| MS.gene05105 | MS.gene47389 | 0.933095 | 3.16E-95 | -1.69E-46 |
| MS.gene051228 | MS.gene47389 | 0.80971 | 1.65E-50 | -1.69E-46 |
| MS.gene051387 | MS.gene47389 | 0.895068 | 1.36E-75 | -1.69E-46 |
| MS.gene051438 | MS.gene47389 | 0.800546 | 1.37E-48 | -1.69E-46 |
| MS.gene051525 | MS.gene47389 | 0.826971 | 2.02E-54 | -1.69E-46 |
| MS.gene051551 | MS.gene47389 | 0.816789 | 4.61E-52 | -1.69E-46 |
| MS.gene051582 | MS.gene47389 | 0.824092 | 9.73E-54 | -1.69E-46 |
| MS.gene051605 | MS.gene47389 | 0.815848 | 7.49E-52 | -1.69E-46 |
| MS.gene051666 | MS.gene47389 | 0.913444 | 6.11E-84 | -1.69E-46 |
| MS.gene051692 | MS.gene47389 | 0.874792 | 5.12E-68 | -1.69E-46 |
| MS.gene051694 | MS.gene47389 | 0.833865 | 4.17E-56 | -1.69E-46 |
| MS.gene051810 | MS.gene47389 | 0.816097 | 6.59E-52 | -1.69E-46 |
| MS.gene051838 | MS.gene47389 | 0.838795 | 2.33E-57 | -1.69E-46 |
| MS.gene051858 | MS.gene47389 | 0.863207 | 2.94E-64 | -1.69E-46 |
| MS.gene051874 | MS.gene47389 | 0.810923 | 9.06E-51 | -1.69E-46 |
| MS.gene051877 | MS.gene47389 | 0.829421 | 5.20E-55 | -1.69E-46 |
| MS.gene052136 | MS.gene47389 | 0.808395 | 3.16E-50 | -1.69E-46 |
| MS.gene052164 | MS.gene47389 | 0.831902 | 1.28E-55 | -1.69E-46 |
| MS.gene052188 | MS.gene47389 | 0.83338 | 5.51E-56 | -1.69E-46 |
| MS.gene052253 | MS.gene47389 | 0.861787 | 8.03E-64 | -1.69E-46 |
| MS.gene052271 | MS.gene47389 | 0.830208 | 3.34E-55 | -1.69E-46 |
| MS.gene052310 | MS.gene47389 | 0.863969 | 1.70E-64 | -1.69E-46 |
| MS.gene052322 | MS.gene47389 | 0.853189 | 2.82E-61 | -1.69E-46 |
| MS.gene052340 | MS.gene47389 | 0.821584 | 3.74E-53 | -1.69E-46 |
| MS.gene052346 | MS.gene47389 | 0.854656 | 1.06E-61 | -1.69E-46 |
| MS.gene052379 | MS.gene47389 | 0.826306 | 2.92E-54 | -1.69E-46 |
| MS.gene05240 | MS.gene47389 | -0.809455 | 1.88E-50 | -1.69E-46 |
| MS.gene052414 | MS.gene47389 | 0.863209 | 2.93E-64 | -1.69E-46 |
| MS.gene052421 | MS.gene47389 | 0.90227 | 1.15E-78 | -1.69E-46 |
| MS.gene052481 | MS.gene47389 | 0.895972 | 5.76E-76 | -1.69E-46 |
| MS.gene052484 | MS.gene47389 | 0.879748 | 9.67E-70 | -1.69E-46 |
| MS.gene052485 | MS.gene47389 | 0.873093 | 1.92E-67 | -1.69E-46 |
| MS.gene052501 | MS.gene47389 | 0.880338 | 5.96E-70 | -1.69E-46 |
| MS.gene052503 | MS.gene47389 | 0.855282 | 7.00E-62 | -1.69E-46 |
| MS.gene052505 | MS.gene47389 | 0.879806 | 9.23E-70 | -1.69E-46 |
| MS.gene052506 | MS.gene47389 | 0.825282 | 5.10E-54 | -1.69E-46 |
| MS.gene052615 | MS.gene47389 | 0.889533 | 2.22E-73 | -1.69E-46 |
| MS.gene052822 | MS.gene47389 | 0.827975 | 1.16E-54 | -1.69E-46 |
| MS.gene052823 | MS.gene47389 | 0.845654 | 3.55E-59 | -1.69E-46 |
| MS.gene052825 | MS.gene47389 | 0.839562 | 1.47E-57 | -1.69E-46 |
| MS.gene052872 | MS.gene47389 | 0.802783 | 4.76E-49 | -1.69E-46 |
| MS.gene052916 | MS.gene47389 | 0.817296 | 3.55E-52 | -1.69E-46 |
| MS.gene052982 | MS.gene47389 | 0.894506 | 2.31E-75 | -1.69E-46 |
| MS.gene053009 | MS.gene47389 | 0.828019 | 1.13E-54 | -1.69E-46 |
| MS.gene053103 | MS.gene47389 | 0.88949 | 2.31E-73 | -1.69E-46 |
| MS.gene053104 | MS.gene47389 | 0.89189 | 2.63E-74 | -1.69E-46 |
| MS.gene053107 | MS.gene47389 | 0.813223 | 2.85E-51 | -1.69E-46 |
| MS.gene053203 | MS.gene47389 | 0.813323 | 2.71E-51 | -1.69E-46 |
| MS.gene053207 | MS.gene47389 | 0.877322 | 6.90E-69 | -1.69E-46 |
| MS.gene053209 | MS.gene47389 | 0.848696 | 5.20E-60 | -1.69E-46 |
| MS.gene053213 | MS.gene47389 | 0.901838 | 1.79E-78 | -1.69E-46 |
| MS.gene053286 | MS.gene47389 | 0.889965 | 1.51E-73 | -1.69E-46 |
| MS.gene053322 | MS.gene47389 | 0.872486 | 3.07E-67 | -1.69E-46 |
| MS.gene053436 | MS.gene47389 | 0.87726 | 7.25E-69 | -1.69E-46 |
| MS.gene053449 | MS.gene47389 | 0.870054 | 1.95E-66 | -1.69E-46 |
| MS.gene053574 | MS.gene47389 | 0.91467 | 1.46E-84 | -1.69E-46 |
| MS.gene053579 | MS.gene47389 | 0.829717 | 4.40E-55 | -1.69E-46 |
| MS.gene053626 | MS.gene47389 | 0.847107 | 1.43E-59 | -1.69E-46 |
| MS.gene053632 | MS.gene47389 | 0.867775 | 1.07E-65 | -1.69E-46 |
| MS.gene053758 | MS.gene47389 | 0.821952 | 3.07E-53 | -1.69E-46 |
| MS.gene053813 | MS.gene47389 | 0.842434 | 2.59E-58 | -1.69E-46 |
| MS.gene053824 | MS.gene47389 | 0.848073 | 7.73E-60 | -1.69E-46 |
| MS.gene053873 | MS.gene47389 | 0.810915 | 9.09E-51 | -1.69E-46 |
| MS.gene053912 | MS.gene47389 | 0.850106 | 2.10E-60 | -1.69E-46 |
| MS.gene053916 | MS.gene47389 | 0.867886 | 9.83E-66 | -1.69E-46 |
| MS.gene054003 | MS.gene47389 | 0.805893 | 1.07E-49 | -1.69E-46 |
| MS.gene054123 | MS.gene47389 | 0.800808 | 1.21E-48 | -1.69E-46 |
| MS.gene054376 | MS.gene47389 | 0.81126 | 7.65E-51 | -1.69E-46 |
| MS.gene054408 | MS.gene47389 | 0.875422 | 3.12E-68 | -1.69E-46 |
| MS.gene054595 | MS.gene47389 | 0.830596 | 2.69E-55 | -1.69E-46 |
| MS.gene054600 | MS.gene47389 | 0.860445 | 2.06E-63 | -1.69E-46 |
| MS.gene054642 | MS.gene47389 | 0.869367 | 3.27E-66 | -1.69E-46 |
| MS.gene054742 | MS.gene47389 | -0.808402 | 3.15E-50 | -1.69E-46 |
| MS.gene054802 | MS.gene47389 | 0.816616 | 5.05E-52 | -1.69E-46 |
| MS.gene054803 | MS.gene47389 | 0.814282 | 1.67E-51 | -1.69E-46 |
| MS.gene054804 | MS.gene47389 | 0.817188 | 3.75E-52 | -1.69E-46 |
| MS.gene054927 | MS.gene47389 | 0.874223 | 7.99E-68 | -1.69E-46 |
| MS.gene05494 | MS.gene47389 | 0.811626 | 6.37E-51 | -1.69E-46 |
| MS.gene054954 | MS.gene47389 | 0.801134 | 1.04E-48 | -1.69E-46 |
| MS.gene054955 | MS.gene47389 | 0.811835 | 5.74E-51 | -1.69E-46 |
| MS.gene05505 | MS.gene47389 | 0.913708 | 4.50E-84 | -1.69E-46 |
| MS.gene055116 | MS.gene47389 | 0.900585 | 6.32E-78 | -1.69E-46 |
| MS.gene055206 | MS.gene47389 | 0.860491 | 1.99E-63 | -1.69E-46 |
| MS.gene055212 | MS.gene47389 | 0.83465 | 2.65E-56 | -1.69E-46 |
| MS.gene055224 | MS.gene47389 | 0.847762 | 9.42E-60 | -1.69E-46 |
| MS.gene055277 | MS.gene47389 | 0.815774 | 7.78E-52 | -1.69E-46 |
| MS.gene055289 | MS.gene47389 | 0.890464 | 9.62E-74 | -1.69E-46 |
| MS.gene055362 | MS.gene47389 | 0.846885 | 1.64E-59 | -1.69E-46 |
| MS.gene055369 | MS.gene47389 | 0.814404 | 1.57E-51 | -1.69E-46 |
| MS.gene055397 | MS.gene47389 | 0.815482 | 9.04E-52 | -1.69E-46 |
| MS.gene055412 | MS.gene47389 | 0.835817 | 1.35E-56 | -1.69E-46 |
| MS.gene055486 | MS.gene47389 | 0.838222 | 3.27E-57 | -1.69E-46 |
| MS.gene055499 | MS.gene47389 | 0.842797 | 2.08E-58 | -1.69E-46 |
| MS.gene055502 | MS.gene47389 | 0.855171 | 7.55E-62 | -1.69E-46 |
| MS.gene055577 | MS.gene47389 | 0.835305 | 1.81E-56 | -1.69E-46 |
| MS.gene055647 | MS.gene47389 | 0.83714 | 6.20E-57 | -1.69E-46 |
| MS.gene055722 | MS.gene47389 | 0.899556 | 1.76E-77 | -1.69E-46 |
| MS.gene055741 | MS.gene47389 | 0.824838 | 6.50E-54 | -1.69E-46 |
| MS.gene055744 | MS.gene47389 | 0.828138 | 1.06E-54 | -1.69E-46 |
| MS.gene055909 | MS.gene47389 | 0.846309 | 2.36E-59 | -1.69E-46 |
| MS.gene055911 | MS.gene47389 | 0.847183 | 1.36E-59 | -1.69E-46 |
| MS.gene05592 | MS.gene47389 | 0.889029 | 3.49E-73 | -1.69E-46 |
| MS.gene055941 | MS.gene47389 | 0.859743 | 3.35E-63 | -1.69E-46 |
| MS.gene05602 | MS.gene47389 | 0.811236 | 7.74E-51 | -1.69E-46 |
| MS.gene056040 | MS.gene47389 | 0.809913 | 1.50E-50 | -1.69E-46 |
| MS.gene056083 | MS.gene47389 | 0.83421 | 3.42E-56 | -1.69E-46 |
| MS.gene056166 | MS.gene47389 | 0.848777 | 4.94E-60 | -1.69E-46 |
| MS.gene056191 | MS.gene47389 | 0.841315 | 5.12E-58 | -1.69E-46 |
| MS.gene056374 | MS.gene47389 | 0.862341 | 5.43E-64 | -1.69E-46 |
| MS.gene056407 | MS.gene47389 | 0.853932 | 1.72E-61 | -1.69E-46 |
| MS.gene056410 | MS.gene47389 | 0.820781 | 5.72E-53 | -1.69E-46 |
| MS.gene056422 | MS.gene47389 | 0.870272 | 1.65E-66 | -1.69E-46 |
| MS.gene056446 | MS.gene47389 | 0.803736 | 3.02E-49 | -1.69E-46 |
| MS.gene056448 | MS.gene47389 | 0.866472 | 2.78E-65 | -1.69E-46 |
| MS.gene056487 | MS.gene47389 | 0.826707 | 2.34E-54 | -1.69E-46 |
| MS.gene056504 | MS.gene47389 | 0.805844 | 1.10E-49 | -1.69E-46 |
| MS.gene056511 | MS.gene47389 | 0.914605 | 1.58E-84 | -1.69E-46 |
| MS.gene056514 | MS.gene47389 | 0.813655 | 2.29E-51 | -1.69E-46 |
| MS.gene056609 | MS.gene47389 | 0.810016 | 1.42E-50 | -1.69E-46 |
| MS.gene05664 | MS.gene47389 | 0.844815 | 5.99E-59 | -1.69E-46 |
| MS.gene056657 | MS.gene47389 | 0.854902 | 9.03E-62 | -1.69E-46 |
| MS.gene05666 | MS.gene47389 | 0.837271 | 5.74E-57 | -1.69E-46 |
| MS.gene056897 | MS.gene47389 | 0.84213 | 3.12E-58 | -1.69E-46 |
| MS.gene057011 | MS.gene47389 | 0.854347 | 1.31E-61 | -1.69E-46 |
| MS.gene05702 | MS.gene47389 | 0.810921 | 9.06E-51 | -1.69E-46 |
| MS.gene057048 | MS.gene47389 | 0.825997 | 3.45E-54 | -1.69E-46 |
| MS.gene057076 | MS.gene47389 | 0.879365 | 1.32E-69 | -1.69E-46 |
| MS.gene057086 | MS.gene47389 | 0.825179 | 5.40E-54 | -1.69E-46 |
| MS.gene057123 | MS.gene47389 | 0.820454 | 6.80E-53 | -1.69E-46 |
| MS.gene057124 | MS.gene47389 | 0.873628 | 1.27E-67 | -1.69E-46 |
| MS.gene057129 | MS.gene47389 | 0.87404 | 9.21E-68 | -1.69E-46 |
| MS.gene057146 | MS.gene47389 | 0.884722 | 1.50E-71 | -1.69E-46 |
| MS.gene057285 | MS.gene47389 | 0.802395 | 5.73E-49 | -1.69E-46 |
| MS.gene057310 | MS.gene47389 | 0.823387 | 1.42E-53 | -1.69E-46 |
| MS.gene057331 | MS.gene47389 | 0.881959 | 1.55E-70 | -1.69E-46 |
| MS.gene05735 | MS.gene47389 | 0.825081 | 5.69E-54 | -1.69E-46 |
| MS.gene057416 | MS.gene47389 | 0.909194 | 7.46E-82 | -1.69E-46 |
| MS.gene057658 | MS.gene47389 | 0.830391 | 3.02E-55 | -1.69E-46 |
| MS.gene057734 | MS.gene47389 | 0.871502 | 6.51E-67 | -1.69E-46 |
| MS.gene057749 | MS.gene47389 | 0.85135 | 9.40E-61 | -1.69E-46 |
| MS.gene057823 | MS.gene47389 | 0.860105 | 2.61E-63 | -1.69E-46 |
| MS.gene057831 | MS.gene47389 | 0.80722 | 5.62E-50 | -1.69E-46 |
| MS.gene057856 | MS.gene47389 | 0.838005 | 3.72E-57 | -1.69E-46 |
| MS.gene05787 | MS.gene47389 | 0.803722 | 3.04E-49 | -1.69E-46 |
| MS.gene057926 | MS.gene47389 | 0.82634 | 2.86E-54 | -1.69E-46 |
| MS.gene058006 | MS.gene47389 | 0.857681 | 1.38E-62 | -1.69E-46 |
| MS.gene058007 | MS.gene47389 | 0.840534 | 8.20E-58 | -1.69E-46 |
| MS.gene058019 | MS.gene47389 | 0.892018 | 2.34E-74 | -1.69E-46 |
| MS.gene058130 | MS.gene47389 | 0.881089 | 3.20E-70 | -1.69E-46 |
| MS.gene058233 | MS.gene47389 | 0.818851 | 1.58E-52 | -1.69E-46 |
| MS.gene058293 | MS.gene47389 | 0.857782 | 1.29E-62 | -1.69E-46 |
| MS.gene058323 | MS.gene47389 | 0.857549 | 1.51E-62 | -1.69E-46 |
| MS.gene058338 | MS.gene47389 | 0.822787 | 1.97E-53 | -1.69E-46 |
| MS.gene058376 | MS.gene47389 | 0.867762 | 1.08E-65 | -1.69E-46 |
| MS.gene05837 | MS.gene47389 | 0.847662 | 1.00E-59 | -1.69E-46 |
| MS.gene058419 | MS.gene47389 | 0.873583 | 1.31E-67 | -1.69E-46 |
| MS.gene058444 | MS.gene47389 | 0.838604 | 2.61E-57 | -1.69E-46 |
| MS.gene058544 | MS.gene47389 | 0.854415 | 1.25E-61 | -1.69E-46 |
| MS.gene058660 | MS.gene47389 | 0.863406 | 2.55E-64 | -1.69E-46 |
| MS.gene058700 | MS.gene47389 | 0.852358 | 4.86E-61 | -1.69E-46 |
| MS.gene058723 | MS.gene47389 | 0.842141 | 3.10E-58 | -1.69E-46 |
| MS.gene058773 | MS.gene47389 | 0.815057 | 1.12E-51 | -1.69E-46 |
| MS.gene058787 | MS.gene47389 | 0.811748 | 5.99E-51 | -1.69E-46 |
| MS.gene058788 | MS.gene47389 | 0.81099 | 8.76E-51 | -1.69E-46 |
| MS.gene058838 | MS.gene47389 | 0.858244 | 9.41E-63 | -1.69E-46 |
| MS.gene05883 | MS.gene47389 | 0.845177 | 4.78E-59 | -1.69E-46 |
| MS.gene058928 | MS.gene47389 | 0.855398 | 6.48E-62 | -1.69E-46 |
| MS.gene058948 | MS.gene47389 | 0.836741 | 7.84E-57 | -1.69E-46 |
| MS.gene058995 | MS.gene47389 | 0.831558 | 1.56E-55 | -1.69E-46 |
| MS.gene059022 | MS.gene47389 | 0.813678 | 2.27E-51 | -1.69E-46 |
| MS.gene059023 | MS.gene47389 | 0.83689 | 7.18E-57 | -1.69E-46 |
| MS.gene059029 | MS.gene47389 | 0.81334 | 2.69E-51 | -1.69E-46 |
| MS.gene05907 | MS.gene47389 | 0.815356 | 9.64E-52 | -1.69E-46 |
| MS.gene05913 | MS.gene47389 | 0.840813 | 6.94E-58 | -1.69E-46 |
| MS.gene059141 | MS.gene47389 | 0.830835 | 2.35E-55 | -1.69E-46 |
| MS.gene05934 | MS.gene47389 | 0.864729 | 9.86E-65 | -1.69E-46 |
| MS.gene059366 | MS.gene47389 | 0.85402 | 1.63E-61 | -1.69E-46 |
| MS.gene059367 | MS.gene47389 | 0.824971 | 6.05E-54 | -1.69E-46 |
| MS.gene059368 | MS.gene47389 | 0.857084 | 2.08E-62 | -1.69E-46 |
| MS.gene059420 | MS.gene47389 | 0.829492 | 4.99E-55 | -1.69E-46 |
| MS.gene059455 | MS.gene47389 | 0.854445 | 1.23E-61 | -1.69E-46 |
| MS.gene059536 | MS.gene47389 | 0.906507 | 1.38E-80 | -1.69E-46 |
| MS.gene059597 | MS.gene47389 | 0.808637 | 2.81E-50 | -1.69E-46 |
| MS.gene059667 | MS.gene47389 | 0.836968 | 6.85E-57 | -1.69E-46 |
| MS.gene059674 | MS.gene47389 | 0.807359 | 5.25E-50 | -1.69E-46 |
| MS.gene059676 | MS.gene47389 | 0.838797 | 2.32E-57 | -1.69E-46 |
| MS.gene059677 | MS.gene47389 | 0.829665 | 4.53E-55 | -1.69E-46 |
| MS.gene059688 | MS.gene47389 | 0.915938 | 3.24E-85 | -1.69E-46 |
| MS.gene059692 | MS.gene47389 | 0.898058 | 7.70E-77 | -1.69E-46 |
| MS.gene059695 | MS.gene47389 | 0.9007 | 5.63E-78 | -1.69E-46 |
| MS.gene059711 | MS.gene47389 | 0.849508 | 3.09E-60 | -1.69E-46 |
| MS.gene059718 | MS.gene47389 | 0.870914 | 1.02E-66 | -1.69E-46 |
| MS.gene059756 | MS.gene47389 | 0.809372 | 1.95E-50 | -1.69E-46 |
| MS.gene059801 | MS.gene47389 | 0.819595 | 1.07E-52 | -1.69E-46 |
| MS.gene059807 | MS.gene47389 | 0.842915 | 1.93E-58 | -1.69E-46 |
| MS.gene059865 | MS.gene47389 | 0.80479 | 1.82E-49 | -1.69E-46 |
| MS.gene059902 | MS.gene47389 | 0.86198 | 7.00E-64 | -1.69E-46 |
| MS.gene059960 | MS.gene47389 | 0.858038 | 1.08E-62 | -1.69E-46 |
| MS.gene060193 | MS.gene47389 | 0.826355 | 2.84E-54 | -1.69E-46 |
| MS.gene060372 | MS.gene47389 | 0.81906 | 1.42E-52 | -1.69E-46 |
| MS.gene060403 | MS.gene47389 | 0.893299 | 7.15E-75 | -1.69E-46 |
| MS.gene060482 | MS.gene47389 | 0.865082 | 7.64E-65 | -1.69E-46 |
| MS.gene060762 | MS.gene47389 | 0.816057 | 6.73E-52 | -1.69E-46 |
| MS.gene06077 | MS.gene47389 | 0.815166 | 1.06E-51 | -1.69E-46 |
| MS.gene060804 | MS.gene47389 | 0.909579 | 4.87E-82 | -1.69E-46 |
| MS.gene060818 | MS.gene47389 | 0.851355 | 9.37E-61 | -1.69E-46 |
| MS.gene060835 | MS.gene47389 | 0.89433 | 2.73E-75 | -1.69E-46 |
| MS.gene060837 | MS.gene47389 | 0.899705 | 1.52E-77 | -1.69E-46 |
| MS.gene06092 | MS.gene47389 | 0.887867 | 9.78E-73 | -1.69E-46 |
| MS.gene06097 | MS.gene47389 | 0.839609 | 1.43E-57 | -1.69E-46 |
| MS.gene061041 | MS.gene47389 | 0.886203 | 4.20E-72 | -1.69E-46 |
| MS.gene061049 | MS.gene47389 | 0.814361 | 1.60E-51 | -1.69E-46 |
| MS.gene061051 | MS.gene47389 | -0.832866 | 7.40E-56 | -1.69E-46 |
| MS.gene061134 | MS.gene47389 | 0.801027 | 1.09E-48 | -1.69E-46 |
| MS.gene061150 | MS.gene47389 | 0.840599 | 7.89E-58 | -1.69E-46 |
| MS.gene061154 | MS.gene47389 | 0.847936 | 8.43E-60 | -1.69E-46 |
| MS.gene061200 | MS.gene47389 | 0.880353 | 5.89E-70 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47389.t1 | MTR_1g061850 | 97.479 | 238 | 4 | 2 | 1 | 237 | 21 | 257 | 2.51e-170 | 469 |
| MS.gene47389.t1 | MTR_3g115970 | 39.888 | 178 | 79 | 4 | 70 | 223 | 52 | 225 | 9.10e-29 | 108 |
| MS.gene47389.t1 | MTR_5g008680 | 37.903 | 124 | 64 | 4 | 105 | 224 | 386 | 500 | 4.36e-17 | 80.1 |
| MS.gene47389.t1 | MTR_4g094785 | 40.000 | 125 | 54 | 5 | 111 | 222 | 122 | 238 | 2.86e-15 | 72.8 |
| MS.gene47389.t1 | MTR_4g032680 | 35.484 | 124 | 66 | 5 | 105 | 223 | 755 | 869 | 1.14e-14 | 73.2 |
| MS.gene47389.t1 | MTR_4g032680 | 35.484 | 124 | 66 | 5 | 105 | 223 | 755 | 869 | 1.14e-14 | 73.2 |
| MS.gene47389.t1 | MTR_4g032680 | 35.484 | 124 | 66 | 5 | 105 | 223 | 646 | 760 | 1.32e-14 | 73.2 |
| MS.gene47389.t1 | MTR_4g032680 | 35.484 | 124 | 66 | 5 | 105 | 223 | 546 | 660 | 1.56e-14 | 72.8 |
| MS.gene47389.t1 | MTR_8g080980 | 39.474 | 114 | 58 | 5 | 112 | 222 | 37 | 142 | 4.01e-14 | 71.6 |
| MS.gene47389.t1 | MTR_8g107010 | 25.346 | 217 | 129 | 6 | 36 | 227 | 47 | 255 | 1.38e-13 | 68.6 |
| MS.gene47389.t1 | MTR_1g061080 | 37.607 | 117 | 64 | 4 | 101 | 211 | 65 | 178 | 1.77e-13 | 67.8 |
| MS.gene47389.t1 | MTR_8g012340 | 41.053 | 95 | 46 | 4 | 130 | 222 | 58 | 144 | 4.03e-13 | 68.6 |
| MS.gene47389.t1 | MTR_7g053470 | 37.895 | 95 | 49 | 4 | 130 | 222 | 52 | 138 | 1.71e-12 | 66.6 |
| MS.gene47389.t1 | MTR_8g091410 | 35.075 | 134 | 66 | 5 | 103 | 223 | 81 | 206 | 2.11e-11 | 61.6 |
| MS.gene47389.t1 | MTR_4g068190 | 37.815 | 119 | 58 | 5 | 109 | 220 | 109 | 218 | 8.14e-11 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47389.t1 | AT3G10060 | 67.811 | 233 | 71 | 2 | 5 | 237 | 2 | 230 | 1.74e-107 | 309 |
| MS.gene47389.t1 | AT1G20810 | 32.159 | 227 | 121 | 5 | 29 | 227 | 8 | 229 | 4.01e-27 | 104 |
| MS.gene47389.t1 | AT1G20810 | 29.075 | 227 | 125 | 6 | 29 | 228 | 8 | 225 | 4.63e-20 | 85.9 |
| MS.gene47389.t1 | AT5G05420 | 38.017 | 121 | 54 | 3 | 112 | 224 | 36 | 143 | 4.47e-17 | 75.9 |
| MS.gene47389.t1 | AT4G25340 | 35.172 | 145 | 80 | 5 | 85 | 224 | 342 | 477 | 1.76e-16 | 78.2 |
| MS.gene47389.t1 | AT3G12340 | 39.344 | 122 | 60 | 5 | 108 | 224 | 266 | 378 | 1.81e-15 | 75.1 |
| MS.gene47389.t1 | AT3G12340 | 39.344 | 122 | 60 | 5 | 108 | 224 | 266 | 378 | 1.81e-15 | 75.1 |
| MS.gene47389.t1 | AT3G12340 | 39.344 | 122 | 60 | 5 | 108 | 224 | 387 | 499 | 2.02e-15 | 75.5 |
| MS.gene47389.t1 | AT5G45680 | 38.235 | 136 | 63 | 5 | 100 | 222 | 79 | 206 | 2.69e-15 | 72.4 |
| MS.gene47389.t1 | AT5G48570 | 41.053 | 95 | 46 | 4 | 130 | 222 | 65 | 151 | 2.69e-14 | 72.0 |
| MS.gene47389.t1 | AT3G25230 | 38.462 | 117 | 61 | 5 | 108 | 221 | 34 | 142 | 9.06e-14 | 70.5 |
| MS.gene47389.t1 | AT3G25230 | 38.462 | 117 | 61 | 5 | 108 | 221 | 34 | 142 | 9.48e-14 | 70.5 |
| MS.gene47389.t1 | AT4G19830 | 32.743 | 113 | 67 | 4 | 105 | 211 | 78 | 187 | 5.93e-13 | 66.2 |
| MS.gene47389.t1 | AT1G18170 | 28.846 | 156 | 103 | 3 | 80 | 227 | 91 | 246 | 3.56e-12 | 64.7 |
Find 61 sgRNAs with CRISPR-Local
Find 165 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAATCACTTTCAGGAATTT+TGG | 0.132496 | 1.4:-51099440 | None:intergenic |
| GCGAGAGGAAATGTCTTAAA+AGG | 0.252599 | 1.4:+51100409 | MS.gene47389:CDS |
| TTCACCTCTATTGTTGCATT+TGG | 0.284032 | 1.4:-51100905 | None:intergenic |
| TTGCATTTGGAGGAATTTCT+TGG | 0.301411 | 1.4:-51100892 | None:intergenic |
| AGATTCACTATGTTGCTAAA+TGG | 0.324207 | 1.4:+51100082 | MS.gene47389:intron |
| TTAGCCTTCAACAATCTTTA+CGG | 0.335766 | 1.4:-51101621 | None:intergenic |
| AGGAAATGTCTTAAAAGGTT+TGG | 0.350382 | 1.4:+51100414 | MS.gene47389:CDS |
| GAAGTTACTTGTGAAGAGAT+TGG | 0.350766 | 1.4:-51098562 | None:intergenic |
| GCCATCAAACAAAGTCCATT+TGG | 0.355516 | 1.4:+51101511 | MS.gene47389:CDS |
| CCCAAATGGACTTTGTTTGA+TGG | 0.357206 | 1.4:-51101512 | None:intergenic |
| TCTATGTCTTTACAAATTGA+AGG | 0.394425 | 1.4:+51098771 | MS.gene47389:CDS |
| ACCTCTATTGTTGCATTTGG+AGG | 0.402774 | 1.4:-51100902 | None:intergenic |
| CTGCTTCCATAGGCAAGTTC+AGG | 0.404957 | 1.4:-51100863 | None:intergenic |
| CCATCAAACAAAGTCCATTT+GGG | 0.414715 | 1.4:+51101512 | MS.gene47389:CDS |
| ATTTGTAAAGACATAGAGAT+TGG | 0.416565 | 1.4:-51098765 | None:intergenic |
| GAAACCATTACTTACCCAAA+TGG | 0.439957 | 1.4:-51101526 | None:intergenic |
| TTGGACTCCCCTGCTTCCAT+AGG | 0.448381 | 1.4:-51100873 | None:intergenic |
| GTCTTAAAAGGTTTGGATGT+AGG | 0.449657 | 1.4:+51100421 | MS.gene47389:CDS |
| AGACAAGGAATGGGTGTTGG+AGG | 0.450682 | 1.4:+51100129 | MS.gene47389:CDS |
| CTGAACTTGCCTATGGAAGC+AGG | 0.452208 | 1.4:+51100864 | MS.gene47389:CDS |
| GTTCAGGTACTATGATTTGA+AGG | 0.462265 | 1.4:+51099856 | MS.gene47389:intron |
| CATGACTAGTAGACAAGGAA+TGG | 0.471106 | 1.4:+51100119 | MS.gene47389:CDS |
| TATACTTACTTGAGACCATT+GGG | 0.478333 | 1.4:-51099472 | None:intergenic |
| GGAGTAGAGGGCATGCGAGT+TGG | 0.478765 | 1.4:+51100442 | MS.gene47389:CDS |
| ATATACTTACTTGAGACCAT+TGG | 0.481885 | 1.4:-51099473 | None:intergenic |
| GTAGAGGGCATGCGAGTTGG+AGG | 0.484472 | 1.4:+51100445 | MS.gene47389:CDS |
| TCCTCCAAATGCAACAATAG+AGG | 0.487414 | 1.4:+51100901 | MS.gene47389:CDS |
| AGGTACTATGATTTGAAGGT+TGG | 0.487515 | 1.4:+51099860 | MS.gene47389:intron |
| GTTCCTCCTGAACTTGCCTA+TGG | 0.490441 | 1.4:+51100857 | MS.gene47389:CDS |
| GGTTTGGATGTAGGAGTAGA+GGG | 0.508312 | 1.4:+51100430 | MS.gene47389:CDS |
| GGGCATGCGAGTTGGAGGCC+AGG | 0.512087 | 1.4:+51100450 | MS.gene47389:CDS |
| CAGCCCTACGGATTTGATGT+AGG | 0.512577 | 1.4:+51100379 | MS.gene47389:intron |
| TGGATGTGAGAGTGCAATGA+AGG | 0.512937 | 1.4:-51098542 | None:intergenic |
| GATTTCAAAACTTTGCCCAA+TGG | 0.533176 | 1.4:+51099457 | MS.gene47389:CDS |
| CAAGGAATGGGTGTTGGAGG+AGG | 0.537182 | 1.4:+51100132 | MS.gene47389:CDS |
| CACTATGTTGCTAAATGGAG+GGG | 0.538954 | 1.4:+51100087 | MS.gene47389:CDS |
| TTTAAATGATTGCAGCCCTA+CGG | 0.545676 | 1.4:+51100367 | MS.gene47389:intron |
| ACTGCCGTAAAGATTGTTGA+AGG | 0.549452 | 1.4:+51101617 | MS.gene47389:CDS |
| AGGTTTGGATGTAGGAGTAG+AGG | 0.549659 | 1.4:+51100429 | MS.gene47389:CDS |
| TTCACTATGTTGCTAAATGG+AGG | 0.551720 | 1.4:+51100085 | MS.gene47389:CDS |
| ATGACTAGTAGACAAGGAAT+GGG | 0.556838 | 1.4:+51100120 | MS.gene47389:CDS |
| TGTCTTTACAAATTGAAGGA+AGG | 0.560268 | 1.4:+51098775 | MS.gene47389:CDS |
| TGCAATGAAGGAGTGAAGGA+TGG | 0.565510 | 1.4:-51098530 | None:intergenic |
| TCCTTGTCTACTAGTCATGA+AGG | 0.569260 | 1.4:-51100115 | None:intergenic |
| AGTAGACAAGGAATGGGTGT+TGG | 0.572841 | 1.4:+51100126 | MS.gene47389:CDS |
| TGAACTTGCCTATGGAAGCA+GGG | 0.574012 | 1.4:+51100865 | MS.gene47389:CDS |
| TCACTATGTTGCTAAATGGA+GGG | 0.574035 | 1.4:+51100086 | MS.gene47389:CDS |
| AGAGTGCAATGAAGGAGTGA+AGG | 0.585916 | 1.4:-51098534 | None:intergenic |
| TATGATTTGAAGGTTGGCGA+TGG | 0.588743 | 1.4:+51099866 | MS.gene47389:CDS |
| GTGAAGGATGGTGATGATGA+TGG | 0.591993 | 1.4:-51098518 | None:intergenic |
| AATGGGTGTTGGAGGAGGAA+CGG | 0.601229 | 1.4:+51100137 | MS.gene47389:CDS |
| CTTCCATAGGCAAGTTCAGG+AGG | 0.606900 | 1.4:-51100860 | None:intergenic |
| TTCGCCTACATCAAATCCGT+AGG | 0.612715 | 1.4:-51100383 | None:intergenic |
| GAACTTGCCTATGGAAGCAG+GGG | 0.631222 | 1.4:+51100866 | MS.gene47389:CDS |
| TCGCCTACATCAAATCCGTA+GGG | 0.638693 | 1.4:-51100382 | None:intergenic |
| TGGAGTTTATGCATGTGATG+TGG | 0.642215 | 1.4:+51098941 | MS.gene47389:CDS |
| GATGGAGCTGAAGCTGTGAA+AGG | 0.645046 | 1.4:+51099884 | MS.gene47389:CDS |
| GAAGAATGTGAACAGCTGCA+TGG | 0.646127 | 1.4:-51098720 | None:intergenic |
| ACCTTCATGACTAGTAGACA+AGG | 0.648553 | 1.4:+51100114 | MS.gene47389:CDS |
| TAACTAACTAACATGTTGTG+AGG | 0.649034 | 1.4:-51098818 | None:intergenic |
| GATGTAGGCGAATCTGCGAG+AGG | 0.684048 | 1.4:+51100394 | MS.gene47389:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAATATATTCAATTTATG+TGG | - | chr1.4:51101007-51101026 | None:intergenic | 10.0% |
| !!! | AAATTTAACAACATTTTAAA+TGG | - | chr1.4:51099318-51099337 | None:intergenic | 10.0% |
| !!! | AATTTAACAACATTTTAAAT+GGG | - | chr1.4:51099317-51099336 | None:intergenic | 10.0% |
| !!! | TTTATTTTTTATTTATGATG+TGG | - | chr1.4:51099011-51099030 | None:intergenic | 10.0% |
| !! | ATTTGATTAACAGATATAAT+AGG | + | chr1.4:51099154-51099173 | MS.gene47389:intron | 15.0% |
| !! | TTTACAACAAAAATTCAAAT+AGG | + | chr1.4:51098691-51098710 | MS.gene47389:CDS | 15.0% |
| !!! | ATGTTATTTGAATATCAATT+TGG | + | chr1.4:51099058-51099077 | MS.gene47389:intron | 15.0% |
| !!! | TGTTATTTGAATATCAATTT+GGG | + | chr1.4:51099059-51099078 | MS.gene47389:intron | 15.0% |
| !! | AAATCATGAATATCAGTAAA+TGG | + | chr1.4:51100528-51100547 | MS.gene47389:intron | 20.0% |
| !! | AAATTGTCGTTAATAAAGTT+CGG | + | chr1.4:51099219-51099238 | MS.gene47389:intron | 20.0% |
| !! | AACTCATAACAATCAATTAA+AGG | - | chr1.4:51100197-51100216 | None:intergenic | 20.0% |
| !! | AAGATATATAAAGCTAGTTA+GGG | + | chr1.4:51099807-51099826 | MS.gene47389:intron | 20.0% |
| !! | ATCCATAATCAATAAATGTA+GGG | - | chr1.4:51101383-51101402 | None:intergenic | 20.0% |
| !! | CTTAAAATAAATGTACTTCT+AGG | - | chr1.4:51099658-51099677 | None:intergenic | 20.0% |
| !! | CTTAGAATTATAAGATTCTT+AGG | + | chr1.4:51098882-51098901 | MS.gene47389:intron | 20.0% |
| !! | GATTTCAATGAAATTTGTAA+CGG | - | chr1.4:51100513-51100532 | None:intergenic | 20.0% |
| !! | TAAAATAGATATGATGATAC+AGG | + | chr1.4:51099622-51099641 | MS.gene47389:intron | 20.0% |
| !! | TAAGATATATAAAGCTAGTT+AGG | + | chr1.4:51099806-51099825 | MS.gene47389:intron | 20.0% |
| !! | TATATGTAGTATCAAATTAC+AGG | - | chr1.4:51100938-51100957 | None:intergenic | 20.0% |
| !! | TTAAAGATGCAAAATTTACA+AGG | + | chr1.4:51100700-51100719 | MS.gene47389:intron | 20.0% |
| !!! | AATTATGCTTTTCTTGTTTT+TGG | + | chr1.4:51099397-51099416 | MS.gene47389:intron | 20.0% |
| !!! | ACTTTATTAACGACAATTTT+AGG | - | chr1.4:51099218-51099237 | None:intergenic | 20.0% |
| !!! | AGAATGATTATTTCTTTTGA+TGG | - | chr1.4:51101246-51101265 | None:intergenic | 20.0% |
| !!! | GTAGTTAATTTCAATGATTT+TGG | + | chr1.4:51101584-51101603 | MS.gene47389:intron | 20.0% |
| !!! | GTATCATCATATCTATTTTA+AGG | - | chr1.4:51099622-51099641 | None:intergenic | 20.0% |
| !!! | TGTAAATTTTGCATCTTTAA+AGG | - | chr1.4:51100700-51100719 | None:intergenic | 20.0% |
| !!! | TTATGCAAAATTTTCTTGTT+GGG | + | chr1.4:51100328-51100347 | MS.gene47389:intron | 20.0% |
| !!! | TTTATGCAAAATTTTCTTGT+TGG | + | chr1.4:51100327-51100346 | MS.gene47389:intron | 20.0% |
| ! | AACATAGTGAATCTACAATA+TGG | - | chr1.4:51100076-51100095 | None:intergenic | 25.0% |
| ! | AATGAACAACTACATTGAAT+TGG | + | chr1.4:51100570-51100589 | MS.gene47389:intron | 25.0% |
| ! | ACTAATGAAACTAAAGTCAT+AGG | - | chr1.4:51099709-51099728 | None:intergenic | 25.0% |
| ! | AGTATATAAGATGCAGAATT+AGG | - | chr1.4:51101409-51101428 | None:intergenic | 25.0% |
| ! | ATTGATTGTTATGAGTTAAC+AGG | + | chr1.4:51100200-51100219 | MS.gene47389:intron | 25.0% |
| ! | ATTTGTAAAGACATAGAGAT+TGG | - | chr1.4:51098768-51098787 | None:intergenic | 25.0% |
| ! | GATCCATAATCAATAAATGT+AGG | - | chr1.4:51101384-51101403 | None:intergenic | 25.0% |
| ! | TATTCATTAGTCATTTGAGT+CGG | - | chr1.4:51099562-51099581 | None:intergenic | 25.0% |
| ! | TCCATAATCAATAAATGTAG+GGG | - | chr1.4:51101382-51101401 | None:intergenic | 25.0% |
| ! | TCTATGTCTTTACAAATTGA+AGG | + | chr1.4:51098771-51098790 | MS.gene47389:CDS | 25.0% |
| !! | ATTTTCACCTTTGTAACTTT+CGG | + | chr1.4:51101463-51101482 | MS.gene47389:intron | 25.0% |
| !! | CTACGACAACATTTTAAATA+TGG | + | chr1.4:51099096-51099115 | MS.gene47389:intron | 25.0% |
| !! | TATGCAAAATTTTCTTGTTG+GGG | + | chr1.4:51100329-51100348 | MS.gene47389:intron | 25.0% |
| !! | TCTTTTTAGATATCTAGAGA+CGG | - | chr1.4:51101212-51101231 | None:intergenic | 25.0% |
| !! | TTTAAAATGTTGTCGTAGTT+AGG | - | chr1.4:51099094-51099113 | None:intergenic | 25.0% |
| !!! | AAAATTAGTTCTTTTTCTGC+CGG | + | chr1.4:51101316-51101335 | MS.gene47389:intron | 25.0% |
| !!! | AAAGTTTTGAAATCACTTTC+AGG | - | chr1.4:51099451-51099470 | None:intergenic | 25.0% |
| AAATATGTTTCGCTCATTAG+TGG | + | chr1.4:51099939-51099958 | MS.gene47389:intron | 30.0% | |
| AGATTCACTATGTTGCTAAA+TGG | + | chr1.4:51100082-51100101 | MS.gene47389:intron | 30.0% | |
| AGGAAATGTCTTAAAAGGTT+TGG | + | chr1.4:51100414-51100433 | MS.gene47389:CDS | 30.0% | |
| ATAGTATGACTCTTGTGATA+TGG | - | chr1.4:51100972-51100991 | None:intergenic | 30.0% | |
| ATATACTTACTTGAGACCAT+TGG | - | chr1.4:51099476-51099495 | None:intergenic | 30.0% | |
| ATGAAATCAACTAGAAAAGC+CGG | - | chr1.4:51099782-51099801 | None:intergenic | 30.0% | |
| CACAATGTATAAATCTTCTG+AGG | + | chr1.4:51100297-51100316 | MS.gene47389:intron | 30.0% | |
| CTCTAATTGATCAAATTCCA+TGG | + | chr1.4:51101073-51101092 | MS.gene47389:intron | 30.0% | |
| GCAAAATTTACAAGGAAGTT+GGG | + | chr1.4:51100708-51100727 | MS.gene47389:intron | 30.0% | |
| TAACTAACTAACATGTTGTG+AGG | - | chr1.4:51098821-51098840 | None:intergenic | 30.0% | |
| TATACTTACTTGAGACCATT+GGG | - | chr1.4:51099475-51099494 | None:intergenic | 30.0% | |
| TGCAAAATTTACAAGGAAGT+TGG | + | chr1.4:51100707-51100726 | MS.gene47389:intron | 30.0% | |
| TGTAATCTTGAAACTTTCAC+CGG | + | chr1.4:51099760-51099779 | MS.gene47389:intron | 30.0% | |
| TGTCTTTACAAATTGAAGGA+AGG | + | chr1.4:51098775-51098794 | MS.gene47389:CDS | 30.0% | |
| TTGATCAATTAGAGTTGTTC+TGG | - | chr1.4:51101067-51101086 | None:intergenic | 30.0% | |
| ! | ATGAAATTTGTAACGGAACA+AGG | - | chr1.4:51100506-51100525 | None:intergenic | 30.0% |
| ! | GAAATCACTTTCAGGAATTT+TGG | - | chr1.4:51099443-51099462 | None:intergenic | 30.0% |
| ! | TATTTTATGTGATCAGTTGC+TGG | + | chr1.4:51098921-51098940 | MS.gene47389:intron | 30.0% |
| ! | TCCCCTACATTTATTGATTA+TGG | + | chr1.4:51101378-51101397 | MS.gene47389:intron | 30.0% |
| ! | TTAGCCTTCAACAATCTTTA+CGG | - | chr1.4:51101624-51101643 | None:intergenic | 30.0% |
| !! | AGTACACTAGTCTTTAGTTA+GGG | + | chr1.4:51099726-51099745 | MS.gene47389:intron | 30.0% |
| !! | TAGTACACTAGTCTTTAGTT+AGG | + | chr1.4:51099725-51099744 | MS.gene47389:intron | 30.0% |
| !! | TGGTTCTACAACAGTTTTAT+TGG | - | chr1.4:51098748-51098767 | None:intergenic | 30.0% |
| !!! | TTCTACAACAGTTTTATTGG+AGG | - | chr1.4:51098745-51098764 | None:intergenic | 30.0% |
| AAATTTACAAGGAAGTTGGG+AGG | + | chr1.4:51100711-51100730 | MS.gene47389:intron | 35.0% | |
| AAGTCCATTTGGGTAAGTAA+TGG | + | chr1.4:51101522-51101541 | MS.gene47389:intron | 35.0% | |
| AATTTACAAGGAAGTTGGGA+GGG | + | chr1.4:51100712-51100731 | MS.gene47389:intron | 35.0% | |
| AGGTACTATGATTTGAAGGT+TGG | + | chr1.4:51099860-51099879 | MS.gene47389:intron | 35.0% | |
| AGGTCCAAATTTAACTGTCT+AGG | - | chr1.4:51100680-51100699 | None:intergenic | 35.0% | |
| AGTCCCTAGACAGTTAAATT+TGG | + | chr1.4:51100673-51100692 | MS.gene47389:intron | 35.0% | |
| ATGACTAGTAGACAAGGAAT+GGG | + | chr1.4:51100120-51100139 | MS.gene47389:CDS | 35.0% | |
| CAGTTAAACTGATTGAACCT+TGG | - | chr1.4:51101154-51101173 | None:intergenic | 35.0% | |
| CCATCAAACAAAGTCCATTT+GGG | + | chr1.4:51101512-51101531 | MS.gene47389:CDS | 35.0% | |
| CGTTAATAAAGTTCGGTTGA+CGG | + | chr1.4:51099226-51099245 | MS.gene47389:intron | 35.0% | |
| CTGAATTGTCTTAACAACAC+AGG | + | chr1.4:51098654-51098673 | MS.gene47389:intron | 35.0% | |
| CTTGTGATATGGAGCTAAAA+TGG | - | chr1.4:51100961-51100980 | None:intergenic | 35.0% | |
| GAAACCATTACTTACCCAAA+TGG | - | chr1.4:51101529-51101548 | None:intergenic | 35.0% | |
| GAAGTTACTTGTGAAGAGAT+TGG | - | chr1.4:51098565-51098584 | None:intergenic | 35.0% | |
| GACAAAACTCTGATATGTTC+AGG | + | chr1.4:51099840-51099859 | MS.gene47389:intron | 35.0% | |
| GATTTCAAAACTTTGCCCAA+TGG | + | chr1.4:51099457-51099476 | MS.gene47389:CDS | 35.0% | |
| GGTCCAAATTTAACTGTCTA+GGG | - | chr1.4:51100679-51100698 | None:intergenic | 35.0% | |
| GGTTCAATCAGTTTAACTGA+AGG | + | chr1.4:51101155-51101174 | MS.gene47389:intron | 35.0% | |
| GGTTCTTCCATGTATAAACA+AGG | + | chr1.4:51100221-51100240 | MS.gene47389:intron | 35.0% | |
| GTCTTAAAAGGTTTGGATGT+AGG | + | chr1.4:51100421-51100440 | MS.gene47389:CDS | 35.0% | |
| GTTCAGGTACTATGATTTGA+AGG | + | chr1.4:51099856-51099875 | MS.gene47389:intron | 35.0% | |
| TCACTATGTTGCTAAATGGA+GGG | + | chr1.4:51100086-51100105 | MS.gene47389:CDS | 35.0% | |
| TGCTAACTCAGAAATGGAAA+TGG | - | chr1.4:51101107-51101126 | None:intergenic | 35.0% | |
| TGGAAATGGTATTTAAGCCA+TGG | - | chr1.4:51101093-51101112 | None:intergenic | 35.0% | |
| TTCACCTCTATTGTTGCATT+TGG | - | chr1.4:51100908-51100927 | None:intergenic | 35.0% | |
| TTCACTATGTTGCTAAATGG+AGG | + | chr1.4:51100085-51100104 | MS.gene47389:CDS | 35.0% | |
| TTGCATTTGGAGGAATTTCT+TGG | - | chr1.4:51100895-51100914 | None:intergenic | 35.0% | |
| TTTAAATGATTGCAGCCCTA+CGG | + | chr1.4:51100367-51100386 | MS.gene47389:intron | 35.0% | |
| TTTCCATTTCTGAGTTAGCA+AGG | + | chr1.4:51101107-51101126 | MS.gene47389:intron | 35.0% | |
| ! | ATTTAGTTGACTTTCTGCAG+CGG | + | chr1.4:51100825-51100844 | MS.gene47389:intron | 35.0% |
| ! | GAATTTTCTACCCTCTACTT+TGG | + | chr1.4:51099533-51099552 | MS.gene47389:intron | 35.0% |
| ! | TAGAGTTGTTCTGGTGTTAA+TGG | - | chr1.4:51101058-51101077 | None:intergenic | 35.0% |
| ! | TCAATGATTTTGGATTCTGC+AGG | + | chr1.4:51101594-51101613 | MS.gene47389:intron | 35.0% |
| ! | TTGAATATCAATTTGGGACG+CGG | + | chr1.4:51099065-51099084 | MS.gene47389:intron | 35.0% |
| !! | GAACATGCCTTGTTTATACA+TGG | - | chr1.4:51100231-51100250 | None:intergenic | 35.0% |
| !! | TAGATTTTAGCCGAGTTACT+TGG | - | chr1.4:51100169-51100188 | None:intergenic | 35.0% |
| AACTCCGAGTTATATGAGTC+AGG | - | chr1.4:51099986-51100005 | None:intergenic | 40.0% | |
| ACCTCTATTGTTGCATTTGG+AGG | - | chr1.4:51100905-51100924 | None:intergenic | 40.0% | |
| ACCTTCATGACTAGTAGACA+AGG | + | chr1.4:51100114-51100133 | MS.gene47389:CDS | 40.0% | |
| ACTGCCGTAAAGATTGTTGA+AGG | + | chr1.4:51101617-51101636 | MS.gene47389:CDS | 40.0% | |
| ATGTGCATCTGAACTCATGT+TGG | + | chr1.4:51101341-51101360 | MS.gene47389:intron | 40.0% | |
| CAAGGTGAATTTGTCTCCTT+TGG | + | chr1.4:51101125-51101144 | MS.gene47389:intron | 40.0% | |
| CACTATGTTGCTAAATGGAG+GGG | + | chr1.4:51100087-51100106 | MS.gene47389:CDS | 40.0% | |
| CAGACCTGACTCATATAACT+CGG | + | chr1.4:51099979-51099998 | MS.gene47389:intron | 40.0% | |
| CATGACTAGTAGACAAGGAA+TGG | + | chr1.4:51100119-51100138 | MS.gene47389:CDS | 40.0% | |
| GATATCTAGAGACGGTTAAG+TGG | - | chr1.4:51101204-51101223 | None:intergenic | 40.0% | |
| GCCATCAAACAAAGTCCATT+TGG | + | chr1.4:51101511-51101530 | MS.gene47389:CDS | 40.0% | |
| GCGAGAGGAAATGTCTTAAA+AGG | + | chr1.4:51100409-51100428 | MS.gene47389:CDS | 40.0% | |
| TATGATTTGAAGGTTGGCGA+TGG | + | chr1.4:51099866-51099885 | MS.gene47389:CDS | 40.0% | |
| TCACCTTGCTAACTCAGAAA+TGG | - | chr1.4:51101113-51101132 | None:intergenic | 40.0% | |
| TCCTCCAAATGCAACAATAG+AGG | + | chr1.4:51100901-51100920 | MS.gene47389:CDS | 40.0% | |
| TCCTTGTCTACTAGTCATGA+AGG | - | chr1.4:51100118-51100137 | None:intergenic | 40.0% | |
| TGAGTTCAGATGCACATAAC+CGG | - | chr1.4:51101338-51101357 | None:intergenic | 40.0% | |
| TGGAGTTTATGCATGTGATG+TGG | + | chr1.4:51098941-51098960 | MS.gene47389:CDS | 40.0% | |
| ! | CCCAAATGGACTTTGTTTGA+TGG | - | chr1.4:51101515-51101534 | None:intergenic | 40.0% |
| !!! | TTTGGTTTTCTGCAGCTAAG+AGG | + | chr1.4:51099415-51099434 | MS.gene47389:intron | 40.0% |
| ACGGTACGATCCAAGTAACT+CGG | + | chr1.4:51100156-51100175 | MS.gene47389:intron | 45.0% | |
| AGAGTGCAATGAAGGAGTGA+AGG | - | chr1.4:51098537-51098556 | None:intergenic | 45.0% | |
| AGGTTTGGATGTAGGAGTAG+AGG | + | chr1.4:51100429-51100448 | MS.gene47389:CDS | 45.0% | |
| AGTAGACAAGGAATGGGTGT+TGG | + | chr1.4:51100126-51100145 | MS.gene47389:CDS | 45.0% | |
| CTGCAGTCCGAAAGTTACAA+AGG | - | chr1.4:51101473-51101492 | None:intergenic | 45.0% | |
| GAACTCATGTTGGCAGGAAA+AGG | + | chr1.4:51101351-51101370 | MS.gene47389:intron | 45.0% | |
| GAAGAATGTGAACAGCTGCA+TGG | - | chr1.4:51098723-51098742 | None:intergenic | 45.0% | |
| GAGTCGGTTACCAAAGTAGA+GGG | - | chr1.4:51099546-51099565 | None:intergenic | 45.0% | |
| GGTTTGGATGTAGGAGTAGA+GGG | + | chr1.4:51100430-51100449 | MS.gene47389:CDS | 45.0% | |
| TCGCCTACATCAAATCCGTA+GGG | - | chr1.4:51100385-51100404 | None:intergenic | 45.0% | |
| TGAACTTGCCTATGGAAGCA+GGG | + | chr1.4:51100865-51100884 | MS.gene47389:CDS | 45.0% | |
| TGAGTCGGTTACCAAAGTAG+AGG | - | chr1.4:51099547-51099566 | None:intergenic | 45.0% | |
| TGCAATGAAGGAGTGAAGGA+TGG | - | chr1.4:51098533-51098552 | None:intergenic | 45.0% | |
| TGTAACTTTCGGACTGCAGA+TGG | + | chr1.4:51101474-51101493 | MS.gene47389:intron | 45.0% | |
| TTCGCCTACATCAAATCCGT+AGG | - | chr1.4:51100386-51100405 | None:intergenic | 45.0% | |
| TTTGTCTCCTTTGGACACCA+AGG | + | chr1.4:51101134-51101153 | MS.gene47389:intron | 45.0% | |
| ! | AGGAAGTTGGGAGGGATTTT+AGG | + | chr1.4:51100720-51100739 | MS.gene47389:intron | 45.0% |
| ! | GTGAAGGATGGTGATGATGA+TGG | - | chr1.4:51098521-51098540 | None:intergenic | 45.0% |
| ! | TGGATGTGAGAGTGCAATGA+AGG | - | chr1.4:51098545-51098564 | None:intergenic | 45.0% |
| !! | GATTGAACCTTGGTGTCCAA+AGG | - | chr1.4:51101144-51101163 | None:intergenic | 45.0% |
| CAGCCCTACGGATTTGATGT+AGG | + | chr1.4:51100379-51100398 | MS.gene47389:intron | 50.0% | |
| CTGAACTTGCCTATGGAAGC+AGG | + | chr1.4:51100864-51100883 | MS.gene47389:CDS | 50.0% | |
| CTGCTTCCATAGGCAAGTTC+AGG | - | chr1.4:51100866-51100885 | None:intergenic | 50.0% | |
| CTTCCATAGGCAAGTTCAGG+AGG | - | chr1.4:51100863-51100882 | None:intergenic | 50.0% | |
| GAACTTGCCTATGGAAGCAG+GGG | + | chr1.4:51100866-51100885 | MS.gene47389:CDS | 50.0% | |
| GATGGAGCTGAAGCTGTGAA+AGG | + | chr1.4:51099884-51099903 | MS.gene47389:CDS | 50.0% | |
| GCATCTGAACTCATGTTGGC+AGG | + | chr1.4:51101345-51101364 | MS.gene47389:intron | 50.0% | |
| GTTCCTCCTGAACTTGCCTA+TGG | + | chr1.4:51100857-51100876 | MS.gene47389:CDS | 50.0% | |
| TGCTAGAGTCACTTCTCACC+TGG | - | chr1.4:51100471-51100490 | None:intergenic | 50.0% | |
| TGGTTAATGCAGTTCACGCG+TGG | + | chr1.4:51099116-51099135 | MS.gene47389:intron | 50.0% | |
| !! | AATGGGTGTTGGAGGAGGAA+CGG | + | chr1.4:51100137-51100156 | MS.gene47389:CDS | 50.0% |
| !! | AGACAAGGAATGGGTGTTGG+AGG | + | chr1.4:51100129-51100148 | MS.gene47389:CDS | 50.0% |
| AAGGATCGCGTGTCGCAGTA+CGG | + | chr1.4:51099903-51099922 | MS.gene47389:intron | 55.0% | |
| GATGTAGGCGAATCTGCGAG+AGG | + | chr1.4:51100394-51100413 | MS.gene47389:CDS | 55.0% | |
| TTGGACTCCCCTGCTTCCAT+AGG | - | chr1.4:51100876-51100895 | None:intergenic | 55.0% | |
| !! | CAAGGAATGGGTGTTGGAGG+AGG | + | chr1.4:51100132-51100151 | MS.gene47389:CDS | 55.0% |
| GGCGACGCAGTTCACACATG+TGG | - | chr1.4:51099296-51099315 | None:intergenic | 60.0% | |
| ! | GGAGTAGAGGGCATGCGAGT+TGG | + | chr1.4:51100442-51100461 | MS.gene47389:CDS | 60.0% |
| ! | GTAGAGGGCATGCGAGTTGG+AGG | + | chr1.4:51100445-51100464 | MS.gene47389:CDS | 60.0% |
| ! | GGGCATGCGAGTTGGAGGCC+AGG | + | chr1.4:51100450-51100469 | MS.gene47389:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 51098498 | 51101643 | 51098498 | ID=MS.gene47389 |
| chr1.4 | mRNA | 51098498 | 51101643 | 51098498 | ID=MS.gene47389.t1;Parent=MS.gene47389 |
| chr1.4 | exon | 51098498 | 51098576 | 51098498 | ID=MS.gene47389.t1.exon1;Parent=MS.gene47389.t1 |
| chr1.4 | CDS | 51098498 | 51098576 | 51098498 | ID=cds.MS.gene47389.t1;Parent=MS.gene47389.t1 |
| chr1.4 | exon | 51098676 | 51098828 | 51098676 | ID=MS.gene47389.t1.exon2;Parent=MS.gene47389.t1 |
| chr1.4 | CDS | 51098676 | 51098828 | 51098676 | ID=cds.MS.gene47389.t1;Parent=MS.gene47389.t1 |
| chr1.4 | exon | 51098937 | 51098992 | 51098937 | ID=MS.gene47389.t1.exon3;Parent=MS.gene47389.t1 |
| chr1.4 | CDS | 51098937 | 51098992 | 51098937 | ID=cds.MS.gene47389.t1;Parent=MS.gene47389.t1 |
| chr1.4 | exon | 51099430 | 51099485 | 51099430 | ID=MS.gene47389.t1.exon4;Parent=MS.gene47389.t1 |
| chr1.4 | CDS | 51099430 | 51099485 | 51099430 | ID=cds.MS.gene47389.t1;Parent=MS.gene47389.t1 |
| chr1.4 | exon | 51099862 | 51099919 | 51099862 | ID=MS.gene47389.t1.exon5;Parent=MS.gene47389.t1 |
| chr1.4 | CDS | 51099862 | 51099919 | 51099862 | ID=cds.MS.gene47389.t1;Parent=MS.gene47389.t1 |
| chr1.4 | exon | 51100084 | 51100158 | 51100084 | ID=MS.gene47389.t1.exon6;Parent=MS.gene47389.t1 |
| chr1.4 | CDS | 51100084 | 51100158 | 51100084 | ID=cds.MS.gene47389.t1;Parent=MS.gene47389.t1 |
| chr1.4 | exon | 51100382 | 51100471 | 51100382 | ID=MS.gene47389.t1.exon7;Parent=MS.gene47389.t1 |
| chr1.4 | CDS | 51100382 | 51100471 | 51100382 | ID=cds.MS.gene47389.t1;Parent=MS.gene47389.t1 |
| chr1.4 | exon | 51100845 | 51100922 | 51100845 | ID=MS.gene47389.t1.exon8;Parent=MS.gene47389.t1 |
| chr1.4 | CDS | 51100845 | 51100922 | 51100845 | ID=cds.MS.gene47389.t1;Parent=MS.gene47389.t1 |
| chr1.4 | exon | 51101493 | 51101533 | 51101493 | ID=MS.gene47389.t1.exon9;Parent=MS.gene47389.t1 |
| chr1.4 | CDS | 51101493 | 51101533 | 51101493 | ID=cds.MS.gene47389.t1;Parent=MS.gene47389.t1 |
| chr1.4 | exon | 51101616 | 51101643 | 51101616 | ID=MS.gene47389.t1.exon10;Parent=MS.gene47389.t1 |
| chr1.4 | CDS | 51101616 | 51101643 | 51101616 | ID=cds.MS.gene47389.t1;Parent=MS.gene47389.t1 |
| Gene Sequence |
| Protein sequence |
