Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50834.t1 | XP_003598013.1 | 89.4 | 273 | 25 | 1 | 2 | 274 | 31 | 299 | 4.60E-122 | 447.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50834.t1 | G7IYD2 | 89.4 | 273 | 25 | 1 | 2 | 274 | 31 | 299 | 3.3e-122 | 447.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene50834 | 0.81496 | 1.18E-51 | -1.69E-46 |
| MS.gene049351 | MS.gene50834 | 0.859349 | 4.40E-63 | -1.69E-46 |
| MS.gene049356 | MS.gene50834 | 0.8018 | 7.59E-49 | -1.69E-46 |
| MS.gene049427 | MS.gene50834 | 0.831613 | 1.51E-55 | -1.69E-46 |
| MS.gene049661 | MS.gene50834 | 0.848591 | 5.56E-60 | -1.69E-46 |
| MS.gene049662 | MS.gene50834 | 0.853246 | 2.71E-61 | -1.69E-46 |
| MS.gene049758 | MS.gene50834 | 0.841897 | 3.60E-58 | -1.69E-46 |
| MS.gene049805 | MS.gene50834 | 0.800129 | 1.67E-48 | -1.69E-46 |
| MS.gene050076 | MS.gene50834 | 0.827235 | 1.75E-54 | -1.69E-46 |
| MS.gene050301 | MS.gene50834 | 0.867866 | 9.98E-66 | -1.69E-46 |
| MS.gene050397 | MS.gene50834 | 0.82929 | 5.59E-55 | -1.69E-46 |
| MS.gene050432 | MS.gene50834 | 0.854727 | 1.02E-61 | -1.69E-46 |
| MS.gene050529 | MS.gene50834 | 0.838084 | 3.55E-57 | -1.69E-46 |
| MS.gene050593 | MS.gene50834 | 0.80546 | 1.32E-49 | -1.69E-46 |
| MS.gene050670 | MS.gene50834 | 0.856323 | 3.48E-62 | -1.69E-46 |
| MS.gene050767 | MS.gene50834 | 0.82411 | 9.64E-54 | -1.69E-46 |
| MS.gene050770 | MS.gene50834 | 0.828235 | 1.01E-54 | -1.69E-46 |
| MS.gene050783 | MS.gene50834 | 0.84241 | 2.63E-58 | -1.69E-46 |
| MS.gene050812 | MS.gene50834 | 0.830659 | 2.59E-55 | -1.69E-46 |
| MS.gene05101 | MS.gene50834 | 0.858601 | 7.36E-63 | -1.69E-46 |
| MS.gene05105 | MS.gene50834 | 0.849207 | 3.75E-60 | -1.69E-46 |
| MS.gene051387 | MS.gene50834 | 0.844227 | 8.61E-59 | -1.69E-46 |
| MS.gene051471 | MS.gene50834 | 0.82625 | 3.01E-54 | -1.69E-46 |
| MS.gene051582 | MS.gene50834 | 0.832462 | 9.33E-56 | -1.69E-46 |
| MS.gene051666 | MS.gene50834 | 0.848608 | 5.50E-60 | -1.69E-46 |
| MS.gene051692 | MS.gene50834 | 0.813907 | 2.02E-51 | -1.69E-46 |
| MS.gene051694 | MS.gene50834 | 0.800327 | 1.52E-48 | -1.69E-46 |
| MS.gene051877 | MS.gene50834 | 0.855454 | 6.24E-62 | -1.69E-46 |
| MS.gene052078 | MS.gene50834 | 0.849583 | 2.95E-60 | -1.69E-46 |
| MS.gene052188 | MS.gene50834 | 0.843173 | 1.65E-58 | -1.69E-46 |
| MS.gene052253 | MS.gene50834 | 0.830557 | 2.75E-55 | -1.69E-46 |
| MS.gene052310 | MS.gene50834 | 0.856951 | 2.27E-62 | -1.69E-46 |
| MS.gene052322 | MS.gene50834 | 0.852696 | 3.90E-61 | -1.69E-46 |
| MS.gene052326 | MS.gene50834 | 0.856606 | 2.87E-62 | -1.69E-46 |
| MS.gene052340 | MS.gene50834 | 0.808501 | 3.00E-50 | -1.69E-46 |
| MS.gene052421 | MS.gene50834 | 0.828555 | 8.42E-55 | -1.69E-46 |
| MS.gene052481 | MS.gene50834 | 0.831988 | 1.22E-55 | -1.69E-46 |
| MS.gene052484 | MS.gene50834 | 0.820325 | 7.28E-53 | -1.69E-46 |
| MS.gene052485 | MS.gene50834 | 0.849111 | 3.99E-60 | -1.69E-46 |
| MS.gene052982 | MS.gene50834 | 0.816853 | 4.46E-52 | -1.69E-46 |
| MS.gene053103 | MS.gene50834 | 0.839137 | 1.90E-57 | -1.69E-46 |
| MS.gene053104 | MS.gene50834 | 0.834403 | 3.06E-56 | -1.69E-46 |
| MS.gene053107 | MS.gene50834 | 0.838023 | 3.68E-57 | -1.69E-46 |
| MS.gene053207 | MS.gene50834 | 0.815344 | 9.70E-52 | -1.69E-46 |
| MS.gene053209 | MS.gene50834 | 0.85274 | 3.78E-61 | -1.69E-46 |
| MS.gene053322 | MS.gene50834 | 0.83986 | 1.23E-57 | -1.69E-46 |
| MS.gene053836 | MS.gene50834 | 0.841858 | 3.68E-58 | -1.69E-46 |
| MS.gene054123 | MS.gene50834 | 0.856009 | 4.30E-62 | -1.69E-46 |
| MS.gene054376 | MS.gene50834 | 0.829055 | 6.38E-55 | -1.69E-46 |
| MS.gene05455 | MS.gene50834 | 0.830014 | 3.73E-55 | -1.69E-46 |
| MS.gene054802 | MS.gene50834 | 0.836625 | 8.38E-57 | -1.69E-46 |
| MS.gene054803 | MS.gene50834 | 0.834427 | 3.02E-56 | -1.69E-46 |
| MS.gene054804 | MS.gene50834 | 0.838291 | 3.14E-57 | -1.69E-46 |
| MS.gene054955 | MS.gene50834 | 0.811874 | 5.63E-51 | -1.69E-46 |
| MS.gene05505 | MS.gene50834 | 0.820256 | 7.55E-53 | -1.69E-46 |
| MS.gene055116 | MS.gene50834 | 0.859563 | 3.79E-63 | -1.69E-46 |
| MS.gene055277 | MS.gene50834 | 0.855638 | 5.51E-62 | -1.69E-46 |
| MS.gene055390 | MS.gene50834 | 0.844899 | 5.68E-59 | -1.69E-46 |
| MS.gene055412 | MS.gene50834 | 0.806295 | 8.82E-50 | -1.69E-46 |
| MS.gene055422 | MS.gene50834 | 0.837953 | 3.83E-57 | -1.69E-46 |
| MS.gene055428 | MS.gene50834 | 0.849133 | 3.93E-60 | -1.69E-46 |
| MS.gene055499 | MS.gene50834 | 0.82291 | 1.84E-53 | -1.69E-46 |
| MS.gene055896 | MS.gene50834 | 0.80466 | 1.94E-49 | -1.69E-46 |
| MS.gene05592 | MS.gene50834 | 0.822477 | 2.32E-53 | -1.69E-46 |
| MS.gene05602 | MS.gene50834 | 0.853467 | 2.34E-61 | -1.69E-46 |
| MS.gene056191 | MS.gene50834 | 0.816806 | 4.57E-52 | -1.69E-46 |
| MS.gene056407 | MS.gene50834 | 0.901162 | 3.54E-78 | -1.69E-46 |
| MS.gene056410 | MS.gene50834 | 0.859019 | 5.52E-63 | -1.69E-46 |
| MS.gene056452 | MS.gene50834 | 0.805258 | 1.46E-49 | -1.69E-46 |
| MS.gene056511 | MS.gene50834 | 0.800828 | 1.20E-48 | -1.69E-46 |
| MS.gene056609 | MS.gene50834 | 0.806063 | 9.87E-50 | -1.69E-46 |
| MS.gene056612 | MS.gene50834 | 0.816411 | 5.61E-52 | -1.69E-46 |
| MS.gene056796 | MS.gene50834 | 0.852901 | 3.40E-61 | -1.69E-46 |
| MS.gene056897 | MS.gene50834 | 0.814491 | 1.50E-51 | -1.69E-46 |
| MS.gene057011 | MS.gene50834 | 0.845845 | 3.15E-59 | -1.69E-46 |
| MS.gene05702 | MS.gene50834 | 0.83535 | 1.77E-56 | -1.69E-46 |
| MS.gene057123 | MS.gene50834 | 0.802636 | 5.11E-49 | -1.69E-46 |
| MS.gene057124 | MS.gene50834 | 0.808354 | 3.23E-50 | -1.69E-46 |
| MS.gene057129 | MS.gene50834 | 0.838434 | 2.88E-57 | -1.69E-46 |
| MS.gene057146 | MS.gene50834 | 0.826944 | 2.05E-54 | -1.69E-46 |
| MS.gene057295 | MS.gene50834 | 0.834648 | 2.65E-56 | -1.69E-46 |
| MS.gene057331 | MS.gene50834 | 0.806031 | 1.00E-49 | -1.69E-46 |
| MS.gene057416 | MS.gene50834 | 0.817592 | 3.04E-52 | -1.69E-46 |
| MS.gene057448 | MS.gene50834 | 0.808883 | 2.49E-50 | -1.69E-46 |
| MS.gene057450 | MS.gene50834 | 0.813183 | 2.91E-51 | -1.69E-46 |
| MS.gene057749 | MS.gene50834 | 0.811649 | 6.30E-51 | -1.69E-46 |
| MS.gene057823 | MS.gene50834 | 0.826546 | 2.56E-54 | -1.69E-46 |
| MS.gene058002 | MS.gene50834 | 0.841649 | 4.18E-58 | -1.69E-46 |
| MS.gene058006 | MS.gene50834 | 0.838925 | 2.15E-57 | -1.69E-46 |
| MS.gene058019 | MS.gene50834 | 0.842107 | 3.16E-58 | -1.69E-46 |
| MS.gene058082 | MS.gene50834 | 0.862573 | 4.60E-64 | -1.69E-46 |
| MS.gene05811 | MS.gene50834 | 0.836847 | 7.36E-57 | -1.69E-46 |
| MS.gene058233 | MS.gene50834 | 0.835949 | 1.25E-56 | -1.69E-46 |
| MS.gene058293 | MS.gene50834 | 0.903057 | 5.14E-79 | -1.69E-46 |
| MS.gene058323 | MS.gene50834 | 0.830309 | 3.16E-55 | -1.69E-46 |
| MS.gene058365 | MS.gene50834 | 0.824753 | 6.80E-54 | -1.69E-46 |
| MS.gene058660 | MS.gene50834 | 0.887051 | 2.00E-72 | -1.69E-46 |
| MS.gene058787 | MS.gene50834 | 0.897213 | 1.75E-76 | -1.69E-46 |
| MS.gene058788 | MS.gene50834 | 0.835536 | 1.59E-56 | -1.69E-46 |
| MS.gene05907 | MS.gene50834 | 0.861892 | 7.45E-64 | -1.69E-46 |
| MS.gene059326 | MS.gene50834 | 0.800486 | 1.41E-48 | -1.69E-46 |
| MS.gene05934 | MS.gene50834 | 0.806382 | 8.45E-50 | -1.69E-46 |
| MS.gene059420 | MS.gene50834 | 0.802602 | 5.19E-49 | -1.69E-46 |
| MS.gene059518 | MS.gene50834 | 0.802025 | 6.82E-49 | -1.69E-46 |
| MS.gene059536 | MS.gene50834 | 0.853611 | 2.13E-61 | -1.69E-46 |
| MS.gene059597 | MS.gene50834 | 0.839697 | 1.36E-57 | -1.69E-46 |
| MS.gene05959 | MS.gene50834 | 0.821601 | 3.70E-53 | -1.69E-46 |
| MS.gene059676 | MS.gene50834 | 0.86278 | 3.98E-64 | -1.69E-46 |
| MS.gene059688 | MS.gene50834 | 0.878996 | 1.79E-69 | -1.69E-46 |
| MS.gene059692 | MS.gene50834 | 0.875507 | 2.92E-68 | -1.69E-46 |
| MS.gene059695 | MS.gene50834 | 0.880801 | 4.07E-70 | -1.69E-46 |
| MS.gene059708 | MS.gene50834 | 0.82831 | 9.65E-55 | -1.69E-46 |
| MS.gene05984 | MS.gene50834 | 0.815004 | 1.15E-51 | -1.69E-46 |
| MS.gene059960 | MS.gene50834 | 0.860115 | 2.59E-63 | -1.69E-46 |
| MS.gene060193 | MS.gene50834 | 0.832656 | 8.35E-56 | -1.69E-46 |
| MS.gene06037 | MS.gene50834 | 0.82276 | 1.99E-53 | -1.69E-46 |
| MS.gene060403 | MS.gene50834 | 0.869783 | 2.39E-66 | -1.69E-46 |
| MS.gene060804 | MS.gene50834 | 0.852986 | 3.22E-61 | -1.69E-46 |
| MS.gene060837 | MS.gene50834 | 0.823898 | 1.08E-53 | -1.69E-46 |
| MS.gene06090 | MS.gene50834 | 0.846223 | 2.49E-59 | -1.69E-46 |
| MS.gene06092 | MS.gene50834 | 0.818431 | 1.97E-52 | -1.69E-46 |
| MS.gene061041 | MS.gene50834 | 0.820259 | 7.54E-53 | -1.69E-46 |
| MS.gene061049 | MS.gene50834 | 0.839719 | 1.34E-57 | -1.69E-46 |
| MS.gene061051 | MS.gene50834 | -0.827503 | 1.51E-54 | -1.69E-46 |
| MS.gene061154 | MS.gene50834 | 0.819476 | 1.14E-52 | -1.69E-46 |
| MS.gene061200 | MS.gene50834 | 0.850266 | 1.90E-60 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50834.t1 | MTR_3g005290 | 91.971 | 274 | 18 | 1 | 1 | 274 | 30 | 299 | 5.58e-178 | 493 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50834.t1 | AT4G24090 | 51.852 | 270 | 120 | 2 | 4 | 270 | 43 | 305 | 3.86e-84 | 255 |
Find 55 sgRNAs with CRISPR-Local
Find 197 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTTGCTCTTAAACACTTTA+AGG | 0.074175 | 3.4:+938806 | MS.gene50834:CDS |
| GATTTGAAGAACGCACTTTC+TGG | 0.183220 | 3.4:+938654 | MS.gene50834:CDS |
| GCCCTTGTTGGCACTTTGTC+AGG | 0.205650 | 3.4:+940709 | MS.gene50834:CDS |
| AGATTATTTCATGCTGGAAA+TGG | 0.309790 | 3.4:+941753 | MS.gene50834:intron |
| GCATCTATCTCTGCCCTTGT+TGG | 0.365023 | 3.4:+940697 | MS.gene50834:CDS |
| TGATCGGGATGAAGAGAGAT+TGG | 0.389359 | 3.4:+940660 | MS.gene50834:CDS |
| TTCGTATGTTGTGCATTGTT+TGG | 0.390224 | 3.4:+940796 | MS.gene50834:CDS |
| ACTTCAAGGAAACGCTTTCC+AGG | 0.393652 | 3.4:+938842 | MS.gene50834:CDS |
| CCCTTGTTGGCACTTTGTCA+GGG | 0.409622 | 3.4:+940710 | MS.gene50834:CDS |
| ATCATCCAAGTTTCTCCTTA+CGG | 0.436352 | 3.4:-940836 | None:intergenic |
| CGCTCTTTGTTGCTAAATGC+GGG | 0.443266 | 3.4:+940589 | MS.gene50834:CDS |
| CAGAGAGAAGCAGCTGAGTT+GGG | 0.445724 | 3.4:-940762 | None:intergenic |
| AGCAAAGTATTCAGAGAGAA+TGG | 0.446842 | 3.4:+941624 | MS.gene50834:CDS |
| ACAGAGAGAAGCAGCTGAGT+TGG | 0.447865 | 3.4:-940763 | None:intergenic |
| CAAGAAGTGGTCCAGCGCTT+AGG | 0.448672 | 3.4:-941087 | None:intergenic |
| TGAAGAACGAGGTGCATTCA+TGG | 0.449382 | 3.4:+940618 | MS.gene50834:CDS |
| AAAGCTTATTAGCGTATGCC+TGG | 0.453590 | 3.4:+941122 | MS.gene50834:CDS |
| GAAAAGTGAAGAAGTTGATC+GGG | 0.470593 | 3.4:+940645 | MS.gene50834:CDS |
| GATGATGCTCAGCTTAAGAC+TGG | 0.472044 | 3.4:+940853 | MS.gene50834:CDS |
| TCTGAATACTTTGCTGAGGC+AGG | 0.475212 | 3.4:-941616 | None:intergenic |
| GTTCTCAGATTATTTCATGC+TGG | 0.485230 | 3.4:+941747 | MS.gene50834:intron |
| GGTGGCCTGAGTGAAGCATA+TGG | 0.489258 | 3.4:-940737 | None:intergenic |
| ATTCAGAGAGAATGGAAGAG+AGG | 0.496321 | 3.4:+941632 | MS.gene50834:CDS |
| GATTACACTCAACAACTTCA+AGG | 0.499214 | 3.4:+938828 | MS.gene50834:CDS |
| GAAGAACGAGGTGCATTCAT+GGG | 0.509604 | 3.4:+940619 | MS.gene50834:CDS |
| GAACGCACTTTCTGGAATGA+TGG | 0.511508 | 3.4:+938662 | MS.gene50834:CDS |
| GAGAAGCAGCTGAGTTGGGT+TGG | 0.522960 | 3.4:-940758 | None:intergenic |
| GCCCTGACAAAGTGCCAACA+AGG | 0.524369 | 3.4:-940711 | None:intergenic |
| AAGCAGCTGAGTTGGGTTGG+TGG | 0.530246 | 3.4:-940755 | None:intergenic |
| GTGGCCTGAGTGAAGCATAT+GGG | 0.535009 | 3.4:-940736 | None:intergenic |
| GGTCTTGCAATCCTAAGCGC+TGG | 0.540628 | 3.4:+941076 | MS.gene50834:intron |
| TGAAAAGTGAAGAAGTTGAT+CGG | 0.542077 | 3.4:+940644 | MS.gene50834:CDS |
| AACGCACTTTCTGGAATGAT+GGG | 0.549369 | 3.4:+938663 | MS.gene50834:CDS |
| CAGAGAGAATGGAAGAGAGG+AGG | 0.557632 | 3.4:+941635 | MS.gene50834:CDS |
| CACATAAATAGTTCCATCCC+AGG | 0.559029 | 3.4:-941140 | None:intergenic |
| AGCAATCTCAACTCTTTGAG+AGG | 0.560228 | 3.4:-938751 | None:intergenic |
| TCGAAGTTCAGTTCAAGAAG+TGG | 0.560534 | 3.4:-941100 | None:intergenic |
| ATATACCGTAAGGAGAAACT+TGG | 0.564974 | 3.4:+940831 | MS.gene50834:CDS |
| ACGCTCTTTGTTGCTAAATG+CGG | 0.580608 | 3.4:+940588 | MS.gene50834:CDS |
| ATGATGCTCAGCTTAAGACT+GGG | 0.594958 | 3.4:+940854 | MS.gene50834:CDS |
| AACTCAGCTGCTTCTCTCTG+TGG | 0.595669 | 3.4:+940765 | MS.gene50834:CDS |
| GCTCCCCATATGCTTCACTC+AGG | 0.614386 | 3.4:+940732 | MS.gene50834:CDS |
| AAGCTTATTAGCGTATGCCT+GGG | 0.615492 | 3.4:+941123 | MS.gene50834:CDS |
| TTATTAGCGTATGCCTGGGA+TGG | 0.620264 | 3.4:+941127 | MS.gene50834:CDS |
| GGATGAAGAGAGATTGGAGT+CGG | 0.627110 | 3.4:+940666 | MS.gene50834:CDS |
| TCTCTCTGAATACTTTGCTG+AGG | 0.629890 | 3.4:-941620 | None:intergenic |
| AAGTCAAAGAGAAATTTCAG+AGG | 0.639606 | 3.4:+940540 | MS.gene50834:CDS |
| TCTTTGTTGCTAAATGCGGG+AGG | 0.641623 | 3.4:+940592 | MS.gene50834:CDS |
| AAGAACGAGGTGCATTCATG+GGG | 0.641964 | 3.4:+940620 | MS.gene50834:CDS |
| TGGCCTGAGTGAAGCATATG+GGG | 0.653318 | 3.4:-940735 | None:intergenic |
| CAGCAGCAGCAAGAACTCAG+AGG | 0.653485 | 3.4:+938623 | MS.gene50834:CDS |
| AGAGGCAAAAGCTATGCTTG+AGG | 0.674852 | 3.4:+940558 | MS.gene50834:CDS |
| CCCTGACAAAGTGCCAACAA+GGG | 0.676499 | 3.4:-940710 | None:intergenic |
| GCGGGAGGTGCTGAAGAACG+AGG | 0.698522 | 3.4:+940607 | MS.gene50834:CDS |
| TGATGCTCAGCTTAAGACTG+GGG | 0.707538 | 3.4:+940855 | MS.gene50834:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTGAATACTTTTTTTAAAA+TGG | + | chr3.4:939149-939168 | MS.gene50834:intron | 10.0% |
| !! | AATAAATAAAATGTTAAGAG+AGG | - | chr3.4:940226-940245 | None:intergenic | 15.0% |
| !!! | AATACTTTTTTTAAAATGGT+CGG | + | chr3.4:939153-939172 | MS.gene50834:intron | 15.0% |
| !!! | AATGATTATCATTTTTTGTT+TGG | - | chr3.4:941362-941381 | None:intergenic | 15.0% |
| !!! | AATTTGCTATTTTGTAAATT+TGG | + | chr3.4:939085-939104 | MS.gene50834:intron | 15.0% |
| !!! | ATTTGCTATTTTGTAAATTT+GGG | + | chr3.4:939086-939105 | MS.gene50834:intron | 15.0% |
| !! | AAAATATTAGAGTAATCCTA+TGG | - | chr3.4:940053-940072 | None:intergenic | 20.0% |
| !! | AAAGTTTATCTTGAATCAAA+GGG | - | chr3.4:940112-940131 | None:intergenic | 20.0% |
| !! | AAATATTAGAGTAATCCTAT+GGG | - | chr3.4:940052-940071 | None:intergenic | 20.0% |
| !! | ATGATAATCGGAAAATTAAT+TGG | - | chr3.4:941273-941292 | None:intergenic | 20.0% |
| !! | ATTAATAAAATTAAGCAACG+TGG | + | chr3.4:939992-940011 | MS.gene50834:intron | 20.0% |
| !! | TAAAGTTTATCTTGAATCAA+AGG | - | chr3.4:940113-940132 | None:intergenic | 20.0% |
| !! | TTAATAAAATTAAGCAACGT+GGG | + | chr3.4:939993-940012 | MS.gene50834:intron | 20.0% |
| !! | TTATTAAGTGTTAGACAATA+TGG | - | chr3.4:939115-939134 | None:intergenic | 20.0% |
| !!! | AATACTTTACTTTGAAAATC+AGG | + | chr3.4:939548-939567 | MS.gene50834:intron | 20.0% |
| !!! | AATATTAGAAGTGTTTGAAA+AGG | + | chr3.4:941456-941475 | MS.gene50834:intron | 20.0% |
| !!! | ATACTTTTTTTAAAATGGTC+GGG | + | chr3.4:939154-939173 | MS.gene50834:intron | 20.0% |
| !!! | ATATTAGAAGTGTTTGAAAA+GGG | + | chr3.4:941457-941476 | MS.gene50834:intron | 20.0% |
| !!! | ATATTTAAGACTCTATTAGA+CGG | + | chr3.4:939020-939039 | MS.gene50834:intron | 20.0% |
| !!! | TGACAAATTTTAAAGAGAAA+CGG | + | chr3.4:939694-939713 | MS.gene50834:intron | 20.0% |
| !!! | TGATTTTCAAAGTAAAGTAT+TGG | - | chr3.4:939549-939568 | None:intergenic | 20.0% |
| !!! | TTTGCTATTTTGTAAATTTG+GGG | + | chr3.4:939087-939106 | MS.gene50834:intron | 20.0% |
| ! | ACGCTATTTAGTTAGAATAA+TGG | - | chr3.4:939350-939369 | None:intergenic | 25.0% |
| ! | AGAAAATAGATAGTAGTAAG+TGG | + | chr3.4:939804-939823 | MS.gene50834:intron | 25.0% |
| ! | ATTTAGTTAGAATAATGGCA+TGG | - | chr3.4:939345-939364 | None:intergenic | 25.0% |
| !! | ATTTACGTTTGAAATCACTA+CGG | - | chr3.4:941419-941438 | None:intergenic | 25.0% |
| !! | GTGTTTTATCAATTGGAAAA+GGG | - | chr3.4:941237-941256 | None:intergenic | 25.0% |
| !!! | AAAAAGTACTTATGATCATC+TGG | - | chr3.4:940415-940434 | None:intergenic | 25.0% |
| !!! | TACTTTTTTTAAAATGGTCG+GGG | + | chr3.4:939155-939174 | MS.gene50834:intron | 25.0% |
| !!! | TTTTCAAAGTAAAGTATTGG+AGG | - | chr3.4:939546-939565 | None:intergenic | 25.0% |
| AAAAAACGACATTTGATGCT+TGG | - | chr3.4:939465-939484 | None:intergenic | 30.0% | |
| AAATAGATAGTAGTAAGTGG+TGG | + | chr3.4:939807-939826 | MS.gene50834:intron | 30.0% | |
| AAGTCAAAGAGAAATTTCAG+AGG | + | chr3.4:940540-940559 | MS.gene50834:CDS | 30.0% | |
| ACGTATATAAGCTATCTTGT+CGG | + | chr3.4:938935-938954 | MS.gene50834:intron | 30.0% | |
| ACTTGCTCTTAAACACTTTA+AGG | + | chr3.4:938806-938825 | MS.gene50834:CDS | 30.0% | |
| AGATTATTTCATGCTGGAAA+TGG | + | chr3.4:941753-941772 | MS.gene50834:intron | 30.0% | |
| CAAAAATGTCAAAATGAGAG+TGG | + | chr3.4:939751-939770 | MS.gene50834:intron | 30.0% | |
| CAATTGATAAAACACGTTAG+CGG | + | chr3.4:941242-941261 | MS.gene50834:intron | 30.0% | |
| TCCATTTACGCTATGATAAT+CGG | - | chr3.4:941285-941304 | None:intergenic | 30.0% | |
| TGAGCAAAAATTAACGATCA+AGG | + | chr3.4:939845-939864 | MS.gene50834:intron | 30.0% | |
| TTGCATACAACTCAAAAGTA+TGG | - | chr3.4:941676-941695 | None:intergenic | 30.0% | |
| ! | AGAGTAAGTTTTACAAGTGA+TGG | - | chr3.4:939523-939542 | None:intergenic | 30.0% |
| ! | AGGGGTTGAATATATTTTCA+TGG | + | chr3.4:941534-941553 | MS.gene50834:intron | 30.0% |
| ! | ATTTTACAGACAAGTCAAGT+TGG | + | chr3.4:940944-940963 | MS.gene50834:intron | 30.0% |
| ! | CGTGTTTTATCAATTGGAAA+AGG | - | chr3.4:941238-941257 | None:intergenic | 30.0% |
| ! | CTGTCTTTATTTGTCAACAA+AGG | + | chr3.4:940454-940473 | MS.gene50834:intron | 30.0% |
| ! | GAATATATTTTCATGGGTGA+GGG | + | chr3.4:941541-941560 | MS.gene50834:intron | 30.0% |
| ! | GATATAAGACTAGTTGTTGA+AGG | - | chr3.4:940181-940200 | None:intergenic | 30.0% |
| ! | GGGGTTGAATATATTTTCAT+GGG | + | chr3.4:941535-941554 | MS.gene50834:intron | 30.0% |
| ! | TGAAAAGTGAAGAAGTTGAT+CGG | + | chr3.4:940644-940663 | MS.gene50834:CDS | 30.0% |
| ! | TGAATATATTTTCATGGGTG+AGG | + | chr3.4:941540-941559 | MS.gene50834:intron | 30.0% |
| ! | TTTCCCTTCATTTCTTTTGT+GGG | + | chr3.4:940988-941007 | MS.gene50834:intron | 30.0% |
| ! | TTTTCCCTTCATTTCTTTTG+TGG | + | chr3.4:940987-941006 | MS.gene50834:intron | 30.0% |
| !!! | ATTTTTTGTTTGGCGTTTGA+AGG | - | chr3.4:941352-941371 | None:intergenic | 30.0% |
| AACGCTAAAATTGATACACC+AGG | + | chr3.4:939220-939239 | MS.gene50834:intron | 35.0% | |
| ACGCTAAAATTGATACACCA+GGG | + | chr3.4:939221-939240 | MS.gene50834:intron | 35.0% | |
| AGAGTGCATGTATACAACAA+GGG | - | chr3.4:940380-940399 | None:intergenic | 35.0% | |
| AGTAGGGATAAAATTTCCTC+CGG | + | chr3.4:940285-940304 | MS.gene50834:intron | 35.0% | |
| ATATACCGTAAGGAGAAACT+TGG | + | chr3.4:940831-940850 | MS.gene50834:CDS | 35.0% | |
| ATCATCCAAGTTTCTCCTTA+CGG | - | chr3.4:940839-940858 | None:intergenic | 35.0% | |
| CAACCCACAAAAGAAATGAA+GGG | - | chr3.4:940994-941013 | None:intergenic | 35.0% | |
| GAAATCGTAAAATCTTGCAG+TGG | + | chr3.4:939604-939623 | MS.gene50834:intron | 35.0% | |
| GATTACACTCAACAACTTCA+AGG | + | chr3.4:938828-938847 | MS.gene50834:CDS | 35.0% | |
| GTTCTCAGATTATTTCATGC+TGG | + | chr3.4:941747-941766 | MS.gene50834:intron | 35.0% | |
| TAATACCCTCAAGATTCAAG+AGG | + | chr3.4:940253-940272 | MS.gene50834:intron | 35.0% | |
| TACGCATAGAACCAATTAAC+AGG | + | chr3.4:939963-939982 | MS.gene50834:intron | 35.0% | |
| TCAACCCACAAAAGAAATGA+AGG | - | chr3.4:940995-941014 | None:intergenic | 35.0% | |
| TCCGATTATCATAGCGTAAA+TGG | + | chr3.4:941281-941300 | MS.gene50834:intron | 35.0% | |
| TGTTCTACTTACATCAACCA+TGG | - | chr3.4:939733-939752 | None:intergenic | 35.0% | |
| TTAATCACTCGCCTGTTAAT+TGG | - | chr3.4:939977-939996 | None:intergenic | 35.0% | |
| TTCGTATGTTGTGCATTGTT+TGG | + | chr3.4:940796-940815 | MS.gene50834:CDS | 35.0% | |
| TTCTAACTAAATAGCGTAGC+AGG | + | chr3.4:939353-939372 | MS.gene50834:intron | 35.0% | |
| ! | AAGAGTGCATGTATACAACA+AGG | - | chr3.4:940381-940400 | None:intergenic | 35.0% |
| ! | AAGTTTTACAAGTGATGGTC+AGG | - | chr3.4:939518-939537 | None:intergenic | 35.0% |
| ! | AGCAAAGTATTCAGAGAGAA+TGG | + | chr3.4:941624-941643 | MS.gene50834:CDS | 35.0% |
| ! | CGCTAACGTGTTTTATCAAT+TGG | - | chr3.4:941244-941263 | None:intergenic | 35.0% |
| ! | GAAAAGTGAAGAAGTTGATC+GGG | + | chr3.4:940645-940664 | MS.gene50834:CDS | 35.0% |
| ! | TGACTTTTCGATATACCGTA+AGG | + | chr3.4:940821-940840 | MS.gene50834:CDS | 35.0% |
| !! | CTTGAATCTTGAGGGTATTA+TGG | - | chr3.4:940253-940272 | None:intergenic | 35.0% |
| !! | TTAGAAGTGTTTGAAAAGGG+AGG | + | chr3.4:941460-941479 | MS.gene50834:intron | 35.0% |
| AAAGCTTATTAGCGTATGCC+TGG | + | chr3.4:941122-941141 | MS.gene50834:CDS | 40.0% | |
| AAGACTCTATTAGACGGTAG+AGG | + | chr3.4:939026-939045 | MS.gene50834:intron | 40.0% | |
| AAGCTTATTAGCGTATGCCT+GGG | + | chr3.4:941123-941142 | MS.gene50834:CDS | 40.0% | |
| AATCAACTCACTGTGCTCTA+AGG | + | chr3.4:940907-940926 | MS.gene50834:intron | 40.0% | |
| ACGCTCTTTGTTGCTAAATG+CGG | + | chr3.4:940588-940607 | MS.gene50834:CDS | 40.0% | |
| ACTCATCCAACCTACTTCTA+AGG | - | chr3.4:939892-939911 | None:intergenic | 40.0% | |
| AGACTCTATTAGACGGTAGA+GGG | + | chr3.4:939027-939046 | MS.gene50834:intron | 40.0% | |
| AGCAATCTCAACTCTTTGAG+AGG | - | chr3.4:938754-938773 | None:intergenic | 40.0% | |
| AGCTATCTTGTCGGAACTTA+TGG | + | chr3.4:938944-938963 | MS.gene50834:intron | 40.0% | |
| AGCTGAACTTTCTTGGAAGA+GGG | + | chr3.4:941515-941534 | MS.gene50834:intron | 40.0% | |
| AGTTCAGCAGTGAAGCATAA+AGG | - | chr3.4:940311-940330 | None:intergenic | 40.0% | |
| ATAGCAGTAGGTGTGTTTGT+TGG | - | chr3.4:939318-939337 | None:intergenic | 40.0% | |
| ATATGCTCTCCCATATGCAT+CGG | - | chr3.4:939187-939206 | None:intergenic | 40.0% | |
| ATGATGCTCAGCTTAAGACT+GGG | + | chr3.4:940854-940873 | MS.gene50834:CDS | 40.0% | |
| ATGCATGAGCTGAACTTTCT+TGG | + | chr3.4:941508-941527 | MS.gene50834:intron | 40.0% | |
| ATTCAGAGAGAATGGAAGAG+AGG | + | chr3.4:941632-941651 | MS.gene50834:CDS | 40.0% | |
| ATTTGATGCTTGGTAGATGG+TGG | - | chr3.4:939455-939474 | None:intergenic | 40.0% | |
| CACATAAATAGTTCCATCCC+AGG | - | chr3.4:941143-941162 | None:intergenic | 40.0% | |
| CTATGCTGCATGACTACAAT+GGG | + | chr3.4:941483-941502 | MS.gene50834:intron | 40.0% | |
| CTGCAGTTGCATATCAAGTT+TGG | + | chr3.4:939252-939271 | MS.gene50834:intron | 40.0% | |
| GAAGACTATACTCACCACAT+TGG | + | chr3.4:941382-941401 | MS.gene50834:intron | 40.0% | |
| GACATTTGATGCTTGGTAGA+TGG | - | chr3.4:939458-939477 | None:intergenic | 40.0% | |
| GAGTGCATGTATACAACAAG+GGG | - | chr3.4:940379-940398 | None:intergenic | 40.0% | |
| GATTTGAAGAACGCACTTTC+TGG | + | chr3.4:938654-938673 | MS.gene50834:CDS | 40.0% | |
| TAACGATCAAGGAGATCCAT+GGG | + | chr3.4:939856-939875 | MS.gene50834:intron | 40.0% | |
| TAGTAGTAAGTGGTGGTCAA+AGG | + | chr3.4:939814-939833 | MS.gene50834:intron | 40.0% | |
| TCAAGATTCAAGAGGAGGAA+GGG | + | chr3.4:940261-940280 | MS.gene50834:intron | 40.0% | |
| TCGAAGTTCAGTTCAAGAAG+TGG | - | chr3.4:941103-941122 | None:intergenic | 40.0% | |
| TCTCTCTGAATACTTTGCTG+AGG | - | chr3.4:941623-941642 | None:intergenic | 40.0% | |
| TTAACGATCAAGGAGATCCA+TGG | + | chr3.4:939855-939874 | MS.gene50834:intron | 40.0% | |
| TTACATCAACCATGGTCACT+AGG | - | chr3.4:939725-939744 | None:intergenic | 40.0% | |
| TTCCTCCTCTTGAATCTTGA+GGG | - | chr3.4:940261-940280 | None:intergenic | 40.0% | |
| ! | GACAGAGTACTTCAGTAACA+AGG | - | chr3.4:940439-940458 | None:intergenic | 40.0% |
| ! | GATCGTGTAACCTTTGTTTG+TGG | + | chr3.4:939647-939666 | MS.gene50834:intron | 40.0% |
| ! | GGTTGATGTTCTGTAATCTG+TGG | + | chr3.4:939058-939077 | MS.gene50834:intron | 40.0% |
| ! | TTAGAAGTAGGTTGGATGAG+TGG | + | chr3.4:939891-939910 | MS.gene50834:intron | 40.0% |
| ! | TTTTACAAGTGATGGTCAGG+TGG | - | chr3.4:939515-939534 | None:intergenic | 40.0% |
| !! | AACGCACTTTCTGGAATGAT+GGG | + | chr3.4:938663-938682 | MS.gene50834:CDS | 40.0% |
| !! | GTTGAAGGCTTTAAGCATAG+AGG | - | chr3.4:940166-940185 | None:intergenic | 40.0% |
| !!! | GCAAGAACGTTACTTTTACC+TGG | - | chr3.4:938863-938882 | None:intergenic | 40.0% |
| !!! | GCAGCTTTTGCTGTTGTTAA+AGG | + | chr3.4:940883-940902 | MS.gene50834:CDS | 40.0% |
| AAGAACGAGGTGCATTCATG+GGG | + | chr3.4:940620-940639 | MS.gene50834:CDS | 45.0% | |
| ACTTCAAGGAAACGCTTTCC+AGG | + | chr3.4:938842-938861 | MS.gene50834:CDS | 45.0% | |
| AGACGGTAGAGGGACTATAT+TGG | + | chr3.4:939037-939056 | MS.gene50834:intron | 45.0% | |
| AGAGGCAAAAGCTATGCTTG+AGG | + | chr3.4:940558-940577 | MS.gene50834:CDS | 45.0% | |
| CAAGATTCAAGAGGAGGAAG+GGG | + | chr3.4:940262-940281 | MS.gene50834:intron | 45.0% | |
| CCACTAGTTGAGCAATGTGA+AGG | + | chr3.4:940016-940035 | MS.gene50834:intron | 45.0% | |
| CCTTCACATTGCTCAACTAG+TGG | - | chr3.4:940019-940038 | None:intergenic | 45.0% | |
| CGCTCTTTGTTGCTAAATGC+GGG | + | chr3.4:940589-940608 | MS.gene50834:CDS | 45.0% | |
| CTCAAGATTCAAGAGGAGGA+AGG | + | chr3.4:940260-940279 | MS.gene50834:intron | 45.0% | |
| CTGAAACAAAACCGTGTTGC+AGG | + | chr3.4:941055-941074 | MS.gene50834:intron | 45.0% | |
| CTTCCTCCTCTTGAATCTTG+AGG | - | chr3.4:940262-940281 | None:intergenic | 45.0% | |
| GAAGAACGAGGTGCATTCAT+GGG | + | chr3.4:940619-940638 | MS.gene50834:CDS | 45.0% | |
| GAAGGAAAGAGTTTGCCCAT+AGG | + | chr3.4:940034-940053 | MS.gene50834:intron | 45.0% | |
| GAGCTGAACTTTCTTGGAAG+AGG | + | chr3.4:941514-941533 | MS.gene50834:intron | 45.0% | |
| GATGATGCTCAGCTTAAGAC+TGG | + | chr3.4:940853-940872 | MS.gene50834:CDS | 45.0% | |
| GCTATGCTGCATGACTACAA+TGG | + | chr3.4:941482-941501 | MS.gene50834:intron | 45.0% | |
| GCTGAACTTTCTTGGAAGAG+GGG | + | chr3.4:941516-941535 | MS.gene50834:intron | 45.0% | |
| GGATGAAGAGAGATTGGAGT+CGG | + | chr3.4:940666-940685 | MS.gene50834:CDS | 45.0% | |
| GGGTTTGATCCGATGCATAT+GGG | + | chr3.4:939175-939194 | MS.gene50834:intron | 45.0% | |
| TAAATAGCGTAGCAGGCAAC+CGG | + | chr3.4:939360-939379 | MS.gene50834:intron | 45.0% | |
| TACCCTCAAGATTCAAGAGG+AGG | + | chr3.4:940256-940275 | MS.gene50834:intron | 45.0% | |
| TCTGAATACTTTGCTGAGGC+AGG | - | chr3.4:941619-941638 | None:intergenic | 45.0% | |
| TCTTTGTTGCTAAATGCGGG+AGG | + | chr3.4:940592-940611 | MS.gene50834:CDS | 45.0% | |
| TGAAGAACGAGGTGCATTCA+TGG | + | chr3.4:940618-940637 | MS.gene50834:CDS | 45.0% | |
| TGATCGGGATGAAGAGAGAT+TGG | + | chr3.4:940660-940679 | MS.gene50834:CDS | 45.0% | |
| TGATGCTCAGCTTAAGACTG+GGG | + | chr3.4:940855-940874 | MS.gene50834:CDS | 45.0% | |
| TTAAGCATAGAGGTCTGGAC+TGG | - | chr3.4:940156-940175 | None:intergenic | 45.0% | |
| TTATTAGCGTATGCCTGGGA+TGG | + | chr3.4:941127-941146 | MS.gene50834:CDS | 45.0% | |
| ! | ATGGGAGAGCATATGTTGAG+AGG | + | chr3.4:939193-939212 | MS.gene50834:intron | 45.0% |
| ! | CAGGTGGTGTGGTATTTTAC+CGG | - | chr3.4:939499-939518 | None:intergenic | 45.0% |
| ! | CGTGTAACCTTTGTTTGTGG+CGG | + | chr3.4:939650-939669 | MS.gene50834:intron | 45.0% |
| ! | TGGGAGAGCATATGTTGAGA+GGG | + | chr3.4:939194-939213 | MS.gene50834:intron | 45.0% |
| ! | TGGTAGATGGTGGTAACTAG+TGG | - | chr3.4:939445-939464 | None:intergenic | 45.0% |
| ! | TTTTCGACCGCCACAAACAA+AGG | - | chr3.4:939660-939679 | None:intergenic | 45.0% |
| !! | AGGCTTTAAGCATAGAGGTC+TGG | - | chr3.4:940161-940180 | None:intergenic | 45.0% |
| !! | GAACGCACTTTCTGGAATGA+TGG | + | chr3.4:938662-938681 | MS.gene50834:CDS | 45.0% |
| !!! | TTGATTTTTTTTTTTTATAA+TGG | + | chr3.4:939922-939941 | MS.gene50834:intron | 5.0% |
| AACTCAGCTGCTTCTCTCTG+TGG | + | chr3.4:940765-940784 | MS.gene50834:CDS | 50.0% | |
| ACAGAGAGAAGCAGCTGAGT+TGG | - | chr3.4:940766-940785 | None:intergenic | 50.0% | |
| ACGGAGATTCCTAGTGACCA+TGG | + | chr3.4:939713-939732 | MS.gene50834:intron | 50.0% | |
| AGAGAGAGAGAGAGAGAGTG+TGG | - | chr3.4:939398-939417 | None:intergenic | 50.0% | |
| CAGAGAGAAGCAGCTGAGTT+GGG | - | chr3.4:940765-940784 | None:intergenic | 50.0% | |
| CAGAGAGAATGGAAGAGAGG+AGG | + | chr3.4:941635-941654 | MS.gene50834:CDS | 50.0% | |
| CAGCAGTGAAGCATAAAGGC+CGG | - | chr3.4:940307-940326 | None:intergenic | 50.0% | |
| CCCTTGTTGGCACTTTGTCA+GGG | + | chr3.4:940710-940729 | MS.gene50834:CDS | 50.0% | |
| CGGCATGCAACTTTCCAATG+TGG | - | chr3.4:941399-941418 | None:intergenic | 50.0% | |
| GCATCTATCTCTGCCCTTGT+TGG | + | chr3.4:940697-940716 | MS.gene50834:CDS | 50.0% | |
| GGATTGCAAGACCTGCAACA+CGG | - | chr3.4:941069-941088 | None:intergenic | 50.0% | |
| GGGGTTTGATCCGATGCATA+TGG | + | chr3.4:939174-939193 | MS.gene50834:intron | 50.0% | |
| GTGGCCTGAGTGAAGCATAT+GGG | - | chr3.4:940739-940758 | None:intergenic | 50.0% | |
| TGGCCTGAGTGAAGCATATG+GGG | - | chr3.4:940738-940757 | None:intergenic | 50.0% | |
| TGGCTGCCTTAGAAGTAGGT+TGG | + | chr3.4:939883-939902 | MS.gene50834:intron | 50.0% | |
| ! | AGGTTGGCTGCCTTAGAAGT+AGG | + | chr3.4:939879-939898 | MS.gene50834:intron | 50.0% |
| ! | AGTGTGGTGACTAGTTGTGC+CGG | - | chr3.4:939382-939401 | None:intergenic | 50.0% |
| ! | CCCTGACAAAGTGCCAACAA+GGG | - | chr3.4:940713-940732 | None:intergenic | 50.0% |
| ! | GGGAGAGCATATGTTGAGAG+GGG | + | chr3.4:939195-939214 | MS.gene50834:intron | 50.0% |
| !!! | CGTTTTTTGTCATGCAGCGC+CGG | + | chr3.4:939477-939496 | MS.gene50834:intron | 50.0% |
| CAACTGCAGAGACAAGTCCC+TGG | - | chr3.4:939241-939260 | None:intergenic | 55.0% | |
| CAAGAAGTGGTCCAGCGCTT+AGG | - | chr3.4:941090-941109 | None:intergenic | 55.0% | |
| CAAGAGGAGGAAGGGGAGTA+GGG | + | chr3.4:940269-940288 | MS.gene50834:intron | 55.0% | |
| CAAGGAGATCCATGGGAGGT+TGG | + | chr3.4:939863-939882 | MS.gene50834:intron | 55.0% | |
| CAAGTGATGGTCAGGTGGTG+TGG | - | chr3.4:939510-939529 | None:intergenic | 55.0% | |
| CAGCAGCAGCAAGAACTCAG+AGG | + | chr3.4:938623-938642 | MS.gene50834:CDS | 55.0% | |
| CAGTGAAGCATAAAGGCCGG+AGG | - | chr3.4:940304-940323 | None:intergenic | 55.0% | |
| CGATCAAGGAGATCCATGGG+AGG | + | chr3.4:939859-939878 | MS.gene50834:intron | 55.0% | |
| GCCCTTGTTGGCACTTTGTC+AGG | + | chr3.4:940709-940728 | MS.gene50834:CDS | 55.0% | |
| GCTCCCCATATGCTTCACTC+AGG | + | chr3.4:940732-940751 | MS.gene50834:CDS | 55.0% | |
| GGTCTTGCAATCCTAAGCGC+TGG | + | chr3.4:941076-941095 | MS.gene50834:intron | 55.0% | |
| GGTGGCCTGAGTGAAGCATA+TGG | - | chr3.4:940740-940759 | None:intergenic | 55.0% | |
| TCAAGAGGAGGAAGGGGAGT+AGG | + | chr3.4:940268-940287 | MS.gene50834:intron | 55.0% | |
| TGGCATGGCAGCATAGCAGT+AGG | - | chr3.4:939330-939349 | None:intergenic | 55.0% | |
| ! | GAGAAGCAGCTGAGTTGGGT+TGG | - | chr3.4:940761-940780 | None:intergenic | 55.0% |
| ! | GCCCTGACAAAGTGCCAACA+AGG | - | chr3.4:940714-940733 | None:intergenic | 55.0% |
| !! | AAGCAGCTGAGTTGGGTTGG+TGG | - | chr3.4:940758-940777 | None:intergenic | 55.0% |
| CTAAGGCAGCCAACCTCCCA+TGG | - | chr3.4:939875-939894 | None:intergenic | 60.0% | |
| !! | GCGGGAGGTGCTGAAGAACG+AGG | + | chr3.4:940607-940626 | MS.gene50834:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 938594 | 941779 | 938594 | ID=MS.gene50834 |
| chr3.4 | mRNA | 938594 | 941779 | 938594 | ID=MS.gene50834.t1;Parent=MS.gene50834 |
| chr3.4 | exon | 938594 | 938863 | 938594 | ID=MS.gene50834.t1.exon1;Parent=MS.gene50834.t1 |
| chr3.4 | CDS | 938594 | 938863 | 938594 | ID=cds.MS.gene50834.t1;Parent=MS.gene50834.t1 |
| chr3.4 | exon | 940532 | 940904 | 940532 | ID=MS.gene50834.t1.exon2;Parent=MS.gene50834.t1 |
| chr3.4 | CDS | 940532 | 940904 | 940532 | ID=cds.MS.gene50834.t1;Parent=MS.gene50834.t1 |
| chr3.4 | exon | 941077 | 941256 | 941077 | ID=MS.gene50834.t1.exon3;Parent=MS.gene50834.t1 |
| chr3.4 | CDS | 941077 | 941256 | 941077 | ID=cds.MS.gene50834.t1;Parent=MS.gene50834.t1 |
| chr3.4 | exon | 941605 | 941656 | 941605 | ID=MS.gene50834.t1.exon4;Parent=MS.gene50834.t1 |
| chr3.4 | CDS | 941605 | 941656 | 941605 | ID=cds.MS.gene50834.t1;Parent=MS.gene50834.t1 |
| chr3.4 | exon | 941755 | 941779 | 941755 | ID=MS.gene50834.t1.exon5;Parent=MS.gene50834.t1 |
| chr3.4 | CDS | 941755 | 941779 | 941755 | ID=cds.MS.gene50834.t1;Parent=MS.gene50834.t1 |
| Gene Sequence |
| Protein sequence |
