Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059384.t1 | XP_013452196.1 | 93.4 | 453 | 17 | 2 | 1 | 441 | 1 | 452 | 3.50E-219 | 770.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059384.t1 | O31634 | 29.4 | 391 | 240 | 5 | 77 | 434 | 2 | 389 | 3.7e-36 | 154.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059384.t1 | A0A072U8V4 | 93.4 | 453 | 17 | 2 | 1 | 441 | 1 | 452 | 2.5e-219 | 770.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene054164 | MS.gene059384 | 0.8027 | 4.95E-49 | -1.69E-46 |
| MS.gene059384 | MS.gene074568 | 0.804652 | 1.95E-49 | -1.69E-46 |
| MS.gene059384 | MS.gene30708 | 0.808282 | 3.34E-50 | -1.69E-46 |
| MS.gene059384 | MS.gene32232 | 0.808125 | 3.61E-50 | -1.69E-46 |
| MS.gene059384 | MS.gene32234 | 0.808299 | 3.32E-50 | -1.69E-46 |
| MS.gene059384 | MS.gene41080 | 0.806083 | 9.77E-50 | -1.69E-46 |
| MS.gene059384 | MS.gene44068 | 0.814939 | 1.19E-51 | -1.69E-46 |
| MS.gene059384 | MS.gene55694 | 0.801711 | 7.92E-49 | -1.69E-46 |
| MS.gene059384 | MS.gene70692 | 0.812561 | 3.99E-51 | -1.69E-46 |
| MS.gene059384 | MS.gene73819 | 0.813765 | 2.17E-51 | -1.69E-46 |
| MS.gene059384 | MS.gene77615 | 0.801202 | 1.01E-48 | -1.69E-46 |
| MS.gene059384 | MS.gene81559 | 0.812353 | 4.42E-51 | -1.69E-46 |
| MS.gene059384 | MS.gene84483 | 0.800639 | 1.31E-48 | -1.69E-46 |
| MS.gene059384 | MS.gene89545 | 0.818028 | 2.43E-52 | -1.69E-46 |
| MS.gene059384 | MS.gene92153 | 0.803257 | 3.80E-49 | -1.69E-46 |
| MS.gene059384 | MS.gene92220 | 0.800552 | 1.37E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059384.t1 | MTR_6g048050 | 93.377 | 453 | 17 | 2 | 1 | 441 | 1 | 452 | 0.0 | 771 |
| MS.gene059384.t1 | MTR_1g100120 | 59.606 | 406 | 147 | 2 | 53 | 441 | 42 | 447 | 8.46e-159 | 456 |
| MS.gene059384.t1 | MTR_1g100120 | 55.333 | 300 | 117 | 2 | 53 | 335 | 42 | 341 | 3.60e-97 | 295 |
| MS.gene059384.t1 | MTR_0054s0050 | 64.362 | 188 | 8 | 2 | 254 | 441 | 4 | 132 | 3.15e-53 | 174 |
| MS.gene059384.t1 | MTR_7g060910 | 61.272 | 173 | 8 | 2 | 257 | 429 | 1 | 114 | 1.86e-40 | 144 |
| MS.gene059384.t1 | MTR_8g036190 | 87.719 | 57 | 7 | 0 | 254 | 310 | 4 | 60 | 1.57e-26 | 102 |
| MS.gene059384.t1 | MTR_8g036200 | 44.348 | 115 | 17 | 2 | 140 | 254 | 16 | 83 | 6.23e-14 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059384.t1 | AT5G24000 | 59.465 | 449 | 154 | 6 | 10 | 441 | 6 | 443 | 1.53e-174 | 496 |
| MS.gene059384.t1 | AT5G52540 | 57.859 | 439 | 165 | 5 | 18 | 441 | 28 | 461 | 1.26e-153 | 444 |
Find 98 sgRNAs with CRISPR-Local
Find 225 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCCATCTTCTTATTGTTCT+TGG | 0.155822 | 6.3:-42877517 | MS.gene059384:CDS |
| CTTCTTATTGTTCTTGGATT+AGG | 0.227467 | 6.3:-42877511 | MS.gene059384:CDS |
| CAGTATGACCAGCAGGTATA+AGG | 0.256942 | 6.3:+42878066 | None:intergenic |
| ACCATTCCATTGCTATTGTT+TGG | 0.272535 | 6.3:-42879937 | MS.gene059384:CDS |
| TTAGCATCAAACGCGAATAT+TGG | 0.287334 | 6.3:-42877454 | MS.gene059384:CDS |
| ATTGCAGTTGCTACTATAAT+TGG | 0.291922 | 6.3:-42879621 | MS.gene059384:intron |
| CTGATGATCATTGGGGTGTT+TGG | 0.308984 | 6.3:-42880816 | MS.gene059384:intron |
| GAAAGTTGCAGCAGCTCTAA+TGG | 0.324983 | 6.3:-42879544 | MS.gene059384:CDS |
| GCTGCAACTTTCCAGTTATC+AGG | 0.326869 | 6.3:+42879555 | None:intergenic |
| GCATATGAAGTCTGAAAATC+AGG | 0.327161 | 6.3:-42878255 | MS.gene059384:CDS |
| GATCTCTTGGTCCTGATAAC+TGG | 0.334655 | 6.3:-42879566 | MS.gene059384:CDS |
| GCTCTAATGGGTAGCTATAT+TGG | 0.344060 | 6.3:-42879531 | MS.gene059384:CDS |
| CATATCTCCTGATGATCATT+GGG | 0.348308 | 6.3:-42880824 | MS.gene059384:CDS |
| CAACAAGTAGTTCGTTCAAC+TGG | 0.349880 | 6.3:-42879904 | MS.gene059384:CDS |
| ACATACTTCACAAAATTATA+CGG | 0.353945 | 6.3:-42878167 | MS.gene059384:CDS |
| GTTGTTCCTGGAATTCTTAC+CGG | 0.358415 | 6.3:-42877379 | MS.gene059384:CDS |
| TGGGAATCTTTAGTTGTTCC+TGG | 0.360735 | 6.3:-42877391 | MS.gene059384:CDS |
| TGAATATACTTGGGGCAGTT+TGG | 0.369634 | 6.3:+42877563 | None:intergenic |
| AGGTCGGAGAAGACTAAAAT+TGG | 0.371166 | 6.3:-42880078 | MS.gene059384:CDS |
| ATACAAGGAGGAACTCTTCC+AGG | 0.383460 | 6.3:-42878143 | MS.gene059384:CDS |
| GTGGCTTTCTTACTTGGGTC+AGG | 0.387488 | 6.3:-42879871 | MS.gene059384:intron |
| TCATATCTCCTGATGATCAT+TGG | 0.399513 | 6.3:-42880825 | MS.gene059384:CDS |
| CAGTGACAGGTGGGTGTTTG+AGG | 0.407502 | 6.3:+42881052 | None:intergenic |
| CAAACCAAGCGCCTCTGAAA+TGG | 0.410454 | 6.3:+42878901 | None:intergenic |
| GCCATTCCACAAGCTGTTGT+AGG | 0.418638 | 6.3:+42877427 | None:intergenic |
| GGACTTGCTGCAAGTAATCT+TGG | 0.427268 | 6.3:-42880018 | MS.gene059384:CDS |
| AAAATGCCGGTAAGAATTCC+AGG | 0.431345 | 6.3:+42877373 | None:intergenic |
| TGCTGGTCATACTGTTGCCT+TGG | 0.431355 | 6.3:-42878057 | MS.gene059384:CDS |
| AGTATGACCAGCAGGTATAA+GGG | 0.443311 | 6.3:+42878067 | None:intergenic |
| AAGTATATTCATGTTTGCAC+TGG | 0.466227 | 6.3:-42877551 | MS.gene059384:CDS |
| GCTGGTGGTGCAGTCTCTGC+GGG | 0.471768 | 6.3:+42878788 | None:intergenic |
| AAAGTTGCAGCAGCTCTAAT+GGG | 0.474333 | 6.3:-42879543 | MS.gene059384:CDS |
| TGTTGCCTTGGTCTTGATGC+AGG | 0.478138 | 6.3:-42878045 | MS.gene059384:intron |
| TGATCATCAGGAGATATGAT+AGG | 0.483007 | 6.3:+42880829 | None:intergenic |
| ATAAGGGGACTAATCAGCTT+TGG | 0.486288 | 6.3:+42878083 | None:intergenic |
| GCAGTAGCTGTCTGTAACAC+AGG | 0.490849 | 6.3:+42878224 | None:intergenic |
| ACCTGCATATTCAATTGTCT+TGG | 0.491981 | 6.3:-42879977 | MS.gene059384:CDS |
| GCATCAAACGCGAATATTGG+CGG | 0.493349 | 6.3:-42877451 | MS.gene059384:CDS |
| CAAACACCCCAATGATCATC+AGG | 0.499006 | 6.3:+42880817 | None:intergenic |
| CGGACATGAATTGAGGATGT+TGG | 0.500458 | 6.3:+42880960 | None:intergenic |
| ATTAGTCCCCTTATACCTGC+TGG | 0.502272 | 6.3:-42878074 | MS.gene059384:CDS |
| AGTGCAAACATGAATATACT+TGG | 0.504219 | 6.3:+42877553 | None:intergenic |
| ATCCAAGAACAATAAGAAGA+TGG | 0.504284 | 6.3:+42877515 | None:intergenic |
| TGAGGTTGTAGTACGAGGTT+CGG | 0.504390 | 6.3:+42880940 | None:intergenic |
| CCATTCCACAAGCTGTTGTA+GGG | 0.506074 | 6.3:+42877428 | None:intergenic |
| TGGCGTGATGGGATTGGTTG+TGG | 0.507610 | 6.3:+42881018 | None:intergenic |
| ATAGTACCTATGAGATCTCT+TGG | 0.510450 | 6.3:-42879579 | MS.gene059384:CDS |
| AATAGCAATGGAATGGTAAG+AGG | 0.518917 | 6.3:+42879943 | None:intergenic |
| GATACGTGGCGTGATGGGAT+TGG | 0.519297 | 6.3:+42881012 | None:intergenic |
| ACGATGATTGCAGTTACTCC+TGG | 0.520577 | 6.3:+42878125 | None:intergenic |
| TGTGGAATGGCTAAGGCTAA+AGG | 0.521502 | 6.3:-42877415 | MS.gene059384:CDS |
| GTGCAAACATGAATATACTT+GGG | 0.524524 | 6.3:+42877554 | None:intergenic |
| CGTGATGGGATTGGTTGTGG+TGG | 0.530923 | 6.3:+42881021 | None:intergenic |
| TCCAAGACAATTGAATATGC+AGG | 0.534421 | 6.3:+42879976 | None:intergenic |
| GAATGGCTAAGGCTAAAGGC+TGG | 0.544445 | 6.3:-42877411 | MS.gene059384:CDS |
| CCCTACAACAGCTTGTGGAA+TGG | 0.546445 | 6.3:-42877428 | MS.gene059384:CDS |
| GGAGTGATACGTGGCGTGAT+GGG | 0.547393 | 6.3:+42881007 | None:intergenic |
| GTTGCCATTTCAGAGGCGCT+TGG | 0.549654 | 6.3:-42878905 | MS.gene059384:CDS |
| GCTTTAGTGAGCACATTAGT+CGG | 0.551269 | 6.3:-42880039 | MS.gene059384:CDS |
| AACAGCTTGTGGAATGGCTA+AGG | 0.555634 | 6.3:-42877422 | MS.gene059384:CDS |
| GAGACTGCACCACCAGCCAC+TGG | 0.558726 | 6.3:-42878782 | MS.gene059384:intron |
| TTTGTGGTGGTTGGAGCTAG+TGG | 0.561107 | 6.3:-42877604 | MS.gene059384:CDS |
| CGAGGTTCGGACATGAATTG+AGG | 0.564019 | 6.3:+42880953 | None:intergenic |
| ATCTAGTACGGAGAGAATGT+TGG | 0.564197 | 6.3:+42880986 | None:intergenic |
| TCAGGACCAAGAGATCTCAT+AGG | 0.565976 | 6.3:+42879573 | None:intergenic |
| GAAGACTAAAATTGGTAGCA+TGG | 0.569366 | 6.3:-42880070 | MS.gene059384:CDS |
| TGGAGTGATACGTGGCGTGA+TGG | 0.574318 | 6.3:+42881006 | None:intergenic |
| TTTGCTCCAAACAATAGCAA+TGG | 0.576769 | 6.3:+42879931 | None:intergenic |
| AAGGCAACAGTATGACCAGC+AGG | 0.578651 | 6.3:+42878059 | None:intergenic |
| GGCGGCCCTACAACAGCTTG+TGG | 0.579346 | 6.3:-42877433 | MS.gene059384:CDS |
| GGCTGGTGGTGCAGTCTCTG+CGG | 0.579584 | 6.3:+42878787 | None:intergenic |
| TCCAAACAATAGCAATGGAA+TGG | 0.581181 | 6.3:+42879936 | None:intergenic |
| GGGTGTTTGAGGAGAGACAT+TGG | 0.585033 | 6.3:+42881063 | None:intergenic |
| AATCAGCTTTGGTGCAAGAG+TGG | 0.586932 | 6.3:+42878094 | None:intergenic |
| ATTGTTGTAGTGGTGTGTTG+AGG | 0.587057 | 6.3:+42880922 | None:intergenic |
| GGATGTTGGAGAATCTAGTA+CGG | 0.588596 | 6.3:+42880974 | None:intergenic |
| GTATGACCAGCAGGTATAAG+GGG | 0.591828 | 6.3:+42878068 | None:intergenic |
| AATTACCTCGTATCTGTCAA+AGG | 0.593217 | 6.3:-42880902 | MS.gene059384:CDS |
| ATACGAGGTAATTGTTGTAG+TGG | 0.597771 | 6.3:+42880912 | None:intergenic |
| TACTATAATTGGTACTCTAG+TGG | 0.601056 | 6.3:-42879610 | MS.gene059384:CDS |
| TAATTATGTTGCCATTTCAG+AGG | 0.603851 | 6.3:-42878912 | MS.gene059384:CDS |
| CTAATGGGTAGCTATATTGG+TGG | 0.610720 | 6.3:-42879528 | MS.gene059384:CDS |
| ACAAAATTATACGGTATACA+AGG | 0.612153 | 6.3:-42878158 | MS.gene059384:CDS |
| AATGGCTAAGGCTAAAGGCT+GGG | 0.614901 | 6.3:-42877410 | MS.gene059384:CDS |
| CATATGAAGTCTGAAAATCA+GGG | 0.621061 | 6.3:-42878254 | MS.gene059384:CDS |
| GAGAGAGAACAGTGACAGGT+GGG | 0.631941 | 6.3:+42881043 | None:intergenic |
| TGTTACCTGCATCAAGACCA+AGG | 0.651278 | 6.3:+42878040 | None:intergenic |
| TGCAAACATGAATATACTTG+GGG | 0.655619 | 6.3:+42877555 | None:intergenic |
| GAGAATGTTGGAGTGATACG+TGG | 0.664236 | 6.3:+42880998 | None:intergenic |
| GGTGGAGAGAGAACAGTGAC+AGG | 0.664373 | 6.3:+42881039 | None:intergenic |
| ATATCTCCTGATGATCATTG+GGG | 0.680137 | 6.3:-42880823 | MS.gene059384:CDS |
| GAATATGCAGGTGCATCATG+TGG | 0.682049 | 6.3:+42879988 | None:intergenic |
| GGAGAGAGAACAGTGACAGG+TGG | 0.683656 | 6.3:+42881042 | None:intergenic |
| TGTGTTGAGGTTGTAGTACG+AGG | 0.701267 | 6.3:+42880935 | None:intergenic |
| AAAATAGTACCAGTGGCTGG+TGG | 0.703775 | 6.3:+42878773 | None:intergenic |
| AAATTATACGGTATACAAGG+AGG | 0.729505 | 6.3:-42878155 | MS.gene059384:CDS |
| ACAACACTTCGAGTTAAACG+AGG | 0.729919 | 6.3:+42880877 | None:intergenic |
| AGGTTCCTTTGACAGATACG+AGG | 0.742128 | 6.3:+42880897 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAGATTGAATAATTTAAT+GGG | - | chr6.3:42879798-42879817 | MS.gene059384:intron | 10.0% |
| !! | TATAAGATTGAATAATTTAA+TGG | - | chr6.3:42879797-42879816 | MS.gene059384:intron | 10.0% |
| !! | AATAATGAAAGTAATATTTG+AGG | - | chr6.3:42880501-42880520 | MS.gene059384:intron | 15.0% |
| !! | ATTACTTTCATTATTTAGTT+TGG | + | chr6.3:42880496-42880515 | None:intergenic | 15.0% |
| !! | GTAAAATATGTAAATTCTTT+AGG | - | chr6.3:42880629-42880648 | MS.gene059384:intron | 15.0% |
| !! | TTACTTCTTGTAAAAATTTA+AGG | - | chr6.3:42880690-42880709 | MS.gene059384:intron | 15.0% |
| !! | TTCTATTTATCTATACAAAA+TGG | - | chr6.3:42878524-42878543 | MS.gene059384:intron | 15.0% |
| !!! | ATGAATAGTTTTTTTATTAC+CGG | - | chr6.3:42879690-42879709 | MS.gene059384:intron | 15.0% |
| !! | ACATACTTCACAAAATTATA+CGG | - | chr6.3:42880202-42880221 | MS.gene059384:intron | 20.0% |
| !! | ACTAACAAAAGACATATTAA+AGG | - | chr6.3:42880533-42880552 | MS.gene059384:intron | 20.0% |
| !! | ATTTGTACAACTATATAAAG+TGG | - | chr6.3:42878159-42878178 | MS.gene059384:CDS | 20.0% |
| !! | TGTAAAAATTTAAGGATCAT+GGG | - | chr6.3:42880698-42880717 | MS.gene059384:intron | 20.0% |
| !! | TTGACTAAAAAATATCTGTT+TGG | - | chr6.3:42877788-42877807 | MS.gene059384:intron | 20.0% |
| !! | TTGTAAAAATTTAAGGATCA+TGG | - | chr6.3:42880697-42880716 | MS.gene059384:intron | 20.0% |
| !! | TTGTATTCATTATATCAATC+CGG | + | chr6.3:42879712-42879731 | None:intergenic | 20.0% |
| !!! | AGAAGAGTAAACATTAATTT+TGG | + | chr6.3:42880560-42880579 | None:intergenic | 20.0% |
| !!! | ATCATTATAGTTCTAAATTG+AGG | - | chr6.3:42879835-42879854 | MS.gene059384:intron | 20.0% |
| !!! | ATTCAATTAGTTTTAAACTG+CGG | - | chr6.3:42878056-42878075 | MS.gene059384:CDS | 20.0% |
| !!! | TAGCTTTTTTTTTTTTACAG+AGG | + | chr6.3:42877892-42877911 | None:intergenic | 20.0% |
| !!! | TATTATTTGAAACATGTTGA+TGG | - | chr6.3:42879368-42879387 | MS.gene059384:intron | 20.0% |
| !!! | TCATTATAGTTCTAAATTGA+GGG | - | chr6.3:42879836-42879855 | MS.gene059384:intron | 20.0% |
| !!! | TCTATTCATTTTCTGTAATT+TGG | - | chr6.3:42877645-42877664 | MS.gene059384:intron | 20.0% |
| ! | AAACTAACACTCTATTATAG+TGG | + | chr6.3:42878211-42878230 | None:intergenic | 25.0% |
| ! | AACCATAAAGAAATGGAATT+AGG | + | chr6.3:42877684-42877703 | None:intergenic | 25.0% |
| ! | AACTAACACTCTATTATAGT+GGG | + | chr6.3:42878210-42878229 | None:intergenic | 25.0% |
| ! | AACTATAATGATGATTCCAT+CGG | + | chr6.3:42879827-42879846 | None:intergenic | 25.0% |
| ! | AATTATAACTGTTATGGCTT+TGG | - | chr6.3:42880657-42880676 | MS.gene059384:intron | 25.0% |
| ! | ACAAAATTATACGGTATACA+AGG | - | chr6.3:42880211-42880230 | MS.gene059384:intron | 25.0% |
| ! | ACTATTCATTCCAAAAATTC+TGG | + | chr6.3:42879679-42879698 | None:intergenic | 25.0% |
| ! | ATAGTTGAGCAATTAAGAAT+TGG | - | chr6.3:42879287-42879306 | MS.gene059384:intron | 25.0% |
| ! | ATGCCATTAAAAATTGCATA+GGG | - | chr6.3:42879237-42879256 | MS.gene059384:intron | 25.0% |
| ! | GTTGACAATTATAACTGTTA+TGG | - | chr6.3:42880651-42880670 | MS.gene059384:intron | 25.0% |
| ! | TAGTTGAGCAATTAAGAATT+GGG | - | chr6.3:42879288-42879307 | MS.gene059384:intron | 25.0% |
| ! | TATAGTAAAAATAGTACCAG+TGG | + | chr6.3:42879606-42879625 | None:intergenic | 25.0% |
| ! | TATTATAGACGTGTAATACA+TGG | + | chr6.3:42879073-42879092 | None:intergenic | 25.0% |
| ! | TCACATTTCATAACTAATAC+TGG | + | chr6.3:42879760-42879779 | None:intergenic | 25.0% |
| ! | TTCCTAATTCCATTTCTTTA+TGG | - | chr6.3:42877679-42877698 | MS.gene059384:intron | 25.0% |
| !! | AACTAATCAAAGAGCATAAT+CGG | - | chr6.3:42880468-42880487 | MS.gene059384:intron | 25.0% |
| !! | ACCCTTAATTTTATCAAACA+CGG | - | chr6.3:42877917-42877936 | MS.gene059384:intron | 25.0% |
| !! | ATGTCTTTTGTTAGTCAATT+TGG | + | chr6.3:42880528-42880547 | None:intergenic | 25.0% |
| !! | TGCTCTTTGATTAGTTAATT+TGG | + | chr6.3:42880464-42880483 | None:intergenic | 25.0% |
| !!! | ACTTTTTTAGGTATTGGTTT+TGG | - | chr6.3:42881035-42881054 | MS.gene059384:CDS | 25.0% |
| !!! | ATTGCAACTTTTTTAGGTAT+TGG | - | chr6.3:42881029-42881048 | MS.gene059384:CDS | 25.0% |
| !!! | ATTTGTTGTTGTGAAATACA+AGG | - | chr6.3:42878271-42878290 | MS.gene059384:intron | 25.0% |
| !!! | GTGTTTTTTCACAAACATAA+TGG | + | chr6.3:42879097-42879116 | None:intergenic | 25.0% |
| !!! | GTTTCAATTGCAACTTTTTT+AGG | - | chr6.3:42881023-42881042 | MS.gene059384:CDS | 25.0% |
| !!! | TATAGTGGGTAAATAGTATA+GGG | + | chr6.3:42878196-42878215 | None:intergenic | 25.0% |
| !!! | TATCTGTGCTGTTTATTTTA+TGG | - | chr6.3:42879532-42879551 | MS.gene059384:CDS | 25.0% |
| !!! | TTATAGTGGGTAAATAGTAT+AGG | + | chr6.3:42878197-42878216 | None:intergenic | 25.0% |
| !!! | TTTATGGTTTGTTGAGAAAT+AGG | - | chr6.3:42877695-42877714 | MS.gene059384:intron | 25.0% |
| !!! | TTTGTTGATTCTATTTTGAG+TGG | - | chr6.3:42880358-42880377 | MS.gene059384:intron | 25.0% |
| AAATTATACGGTATACAAGG+AGG | - | chr6.3:42880214-42880233 | MS.gene059384:intron | 30.0% | |
| AAGTATATTCATGTTTGCAC+TGG | - | chr6.3:42880818-42880837 | MS.gene059384:CDS | 30.0% | |
| AATTGAAACACCAAAAATGC+CGG | + | chr6.3:42881012-42881031 | None:intergenic | 30.0% | |
| ACAAGAAACAGCTTAAAAAC+TGG | + | chr6.3:42879637-42879656 | None:intergenic | 30.0% | |
| AGTGCAAACATGAATATACT+TGG | + | chr6.3:42880819-42880838 | None:intergenic | 30.0% | |
| AGTTGATCTATGCTTAATTG+TGG | - | chr6.3:42878882-42878901 | MS.gene059384:CDS | 30.0% | |
| ATAATTTAATGGGAAACCGA+TGG | - | chr6.3:42879808-42879827 | MS.gene059384:intron | 30.0% | |
| ATATCTACAGAAACAACATG+AGG | + | chr6.3:42880589-42880608 | None:intergenic | 30.0% | |
| ATCCAAGAACAATAAGAAGA+TGG | + | chr6.3:42880857-42880876 | None:intergenic | 30.0% | |
| ATCCATCTTCTTATTGTTCT+TGG | - | chr6.3:42880852-42880871 | MS.gene059384:CDS | 30.0% | |
| ATTGCAGTTGCTACTATAAT+TGG | - | chr6.3:42878748-42878767 | MS.gene059384:intron | 30.0% | |
| CAGTGTTTCATAGTTTATGA+AGG | - | chr6.3:42878674-42878693 | MS.gene059384:intron | 30.0% | |
| CATATGAAGTCTGAAAATCA+GGG | - | chr6.3:42880115-42880134 | MS.gene059384:intron | 30.0% | |
| CTCAACAAACCATAAAGAAA+TGG | + | chr6.3:42877691-42877710 | None:intergenic | 30.0% | |
| CTTCTTATTGTTCTTGGATT+AGG | - | chr6.3:42880858-42880877 | MS.gene059384:CDS | 30.0% | |
| CTTGATTTAACGAGTAATGT+TGG | - | chr6.3:42880078-42880097 | MS.gene059384:CDS | 30.0% | |
| GATCGTATGTTAAACATCTT+AGG | + | chr6.3:42880725-42880744 | None:intergenic | 30.0% | |
| GATGCCATTAAAAATTGCAT+AGG | - | chr6.3:42879236-42879255 | MS.gene059384:intron | 30.0% | |
| GCAGATATAGTTCAAAATTG+CGG | + | chr6.3:42879006-42879025 | None:intergenic | 30.0% | |
| GCCGTGTTTGATAAAATTAA+GGG | + | chr6.3:42877921-42877940 | None:intergenic | 30.0% | |
| GTGCAAACATGAATATACTT+GGG | + | chr6.3:42880818-42880837 | None:intergenic | 30.0% | |
| TACTATAATTGGTACTCTAG+TGG | - | chr6.3:42878759-42878778 | MS.gene059384:intron | 30.0% | |
| TGCAAACATGAATATACTTG+GGG | + | chr6.3:42880817-42880836 | None:intergenic | 30.0% | |
| TGCCGTGTTTGATAAAATTA+AGG | + | chr6.3:42877922-42877941 | None:intergenic | 30.0% | |
| TTAAATGTAATTGCACGTGT+CGG | + | chr6.3:42878603-42878622 | None:intergenic | 30.0% | |
| TTGCTCAACTATTCATTCAA+TGG | + | chr6.3:42879279-42879298 | None:intergenic | 30.0% | |
| TTTGTGAAAAAACACTAGCT+TGG | - | chr6.3:42879102-42879121 | MS.gene059384:intron | 30.0% | |
| ! | ACTAATCAAAGAGCATAATC+GGG | - | chr6.3:42880469-42880488 | MS.gene059384:intron | 30.0% |
| ! | CATCCCTATGCAATTTTTAA+TGG | + | chr6.3:42879243-42879262 | None:intergenic | 30.0% |
| ! | CTTTGTTTGGGAAAAAATAG+TGG | + | chr6.3:42878024-42878043 | None:intergenic | 30.0% |
| ! | TAATTATGTTGCCATTTCAG+AGG | - | chr6.3:42879457-42879476 | MS.gene059384:intron | 30.0% |
| ! | TAGACTGCAATTTAGAACTA+TGG | - | chr6.3:42879973-42879992 | MS.gene059384:CDS | 30.0% |
| ! | TTGTTATTAAGGCAAGATGT+AGG | - | chr6.3:42879884-42879903 | MS.gene059384:CDS | 30.0% |
| ! | TTGTTGCATTTTCTGTGTTT+GGG | - | chr6.3:42879653-42879672 | MS.gene059384:intron | 30.0% |
| ! | TTTTAGTGGCTTTCTTACTT+GGG | - | chr6.3:42878493-42878512 | MS.gene059384:intron | 30.0% |
| ! | TTTTCCCAAACAAAGCATAA+GGG | - | chr6.3:42878029-42878048 | MS.gene059384:intron | 30.0% |
| ! | TTTTTCCCAAACAAAGCATA+AGG | - | chr6.3:42878028-42878047 | MS.gene059384:intron | 30.0% |
| !! | ATAGTGGGTAAATAGTATAG+GGG | + | chr6.3:42878195-42878214 | None:intergenic | 30.0% |
| !! | GTGTTTTTGTTCATCTTGAA+TGG | - | chr6.3:42880046-42880065 | MS.gene059384:CDS | 30.0% |
| !! | TGAAACTGATTTTGATGTTG+TGG | - | chr6.3:42878725-42878744 | MS.gene059384:intron | 30.0% |
| !!! | AGGTATTGGTTTTGGATTAA+TGG | - | chr6.3:42881043-42881062 | MS.gene059384:CDS | 30.0% |
| !!! | TTTTATGGTGTTGTTTGCAT+TGG | - | chr6.3:42879547-42879566 | MS.gene059384:CDS | 30.0% |
| AATAGCAATGGAATGGTAAG+AGG | + | chr6.3:42878429-42878448 | None:intergenic | 35.0% | |
| AATCAACAAGGAAGAGTCAA+AGG | + | chr6.3:42879424-42879443 | None:intergenic | 35.0% | |
| AATTACCTCGTATCTGTCAA+AGG | - | chr6.3:42877467-42877486 | MS.gene059384:CDS | 35.0% | |
| ACCTGCATATTCAATTGTCT+TGG | - | chr6.3:42878392-42878411 | MS.gene059384:intron | 35.0% | |
| ATACGAGGTAATTGTTGTAG+TGG | + | chr6.3:42877460-42877479 | None:intergenic | 35.0% | |
| ATACGATCTATTTCGTTCAC+AGG | - | chr6.3:42880737-42880756 | MS.gene059384:intron | 35.0% | |
| ATAGTACCTATGAGATCTCT+TGG | - | chr6.3:42878790-42878809 | MS.gene059384:CDS | 35.0% | |
| ATATCTCCTGATGATCATTG+GGG | - | chr6.3:42877546-42877565 | MS.gene059384:CDS | 35.0% | |
| CATATCTCCTGATGATCATT+GGG | - | chr6.3:42877545-42877564 | MS.gene059384:CDS | 35.0% | |
| GCATATGAAGTCTGAAAATC+AGG | - | chr6.3:42880114-42880133 | MS.gene059384:intron | 35.0% | |
| GTTGTTGTGAAATACAAGGT+CGG | - | chr6.3:42878275-42878294 | MS.gene059384:intron | 35.0% | |
| TAGAGACTAGATACATCTAG+AGG | - | chr6.3:42879042-42879061 | MS.gene059384:intron | 35.0% | |
| TCAAATTATTACCAGTGTCG+TGG | - | chr6.3:42878636-42878655 | MS.gene059384:intron | 35.0% | |
| TCATATCTCCTGATGATCAT+TGG | - | chr6.3:42877544-42877563 | MS.gene059384:CDS | 35.0% | |
| TCCAAACAATAGCAATGGAA+TGG | + | chr6.3:42878436-42878455 | None:intergenic | 35.0% | |
| TCCAAGACAATTGAATATGC+AGG | + | chr6.3:42878396-42878415 | None:intergenic | 35.0% | |
| TGATCATCAGGAGATATGAT+AGG | + | chr6.3:42877543-42877562 | None:intergenic | 35.0% | |
| TTAGCATCAAACGCGAATAT+TGG | - | chr6.3:42880915-42880934 | MS.gene059384:CDS | 35.0% | |
| TTGGTTCACAAAACACACAT+GGG | + | chr6.3:42880445-42880464 | None:intergenic | 35.0% | |
| TTTGCTCCAAACAATAGCAA+TGG | + | chr6.3:42878441-42878460 | None:intergenic | 35.0% | |
| ! | ACCATTCCATTGCTATTGTT+TGG | - | chr6.3:42878432-42878451 | MS.gene059384:intron | 35.0% |
| ! | CTTGTTGCATTTTCTGTGTT+TGG | - | chr6.3:42879652-42879671 | MS.gene059384:intron | 35.0% |
| ! | CTTTTAGTGGCTTTCTTACT+TGG | - | chr6.3:42878492-42878511 | MS.gene059384:intron | 35.0% |
| ! | GAAGACTAAAATTGGTAGCA+TGG | - | chr6.3:42878299-42878318 | MS.gene059384:intron | 35.0% |
| ! | TCATACCCTTATGCTTTGTT+TGG | + | chr6.3:42878037-42878056 | None:intergenic | 35.0% |
| ! | TTTGGTTCACAAAACACACA+TGG | + | chr6.3:42880446-42880465 | None:intergenic | 35.0% |
| !! | CATACCCTTATGCTTTGTTT+GGG | + | chr6.3:42878036-42878055 | None:intergenic | 35.0% |
| !! | CGCTGCAAACTTTGTTATTA+AGG | - | chr6.3:42879873-42879892 | MS.gene059384:CDS | 35.0% |
| !!! | CATGTTGATGGATTTTACGA+TGG | - | chr6.3:42879380-42879399 | MS.gene059384:intron | 35.0% |
| !!! | TCGTTCACAGGTATTTTTTG+TGG | - | chr6.3:42880749-42880768 | MS.gene059384:intron | 35.0% |
| !!! | TTCACAGGTATTTTTTGTGG+TGG | - | chr6.3:42880752-42880771 | MS.gene059384:intron | 35.0% |
| AAAATGCCGGTAAGAATTCC+AGG | + | chr6.3:42880999-42881018 | None:intergenic | 40.0% | |
| AGGTCGGAGAAGACTAAAAT+TGG | - | chr6.3:42878291-42878310 | MS.gene059384:intron | 40.0% | |
| AGTATGACCAGCAGGTATAA+GGG | + | chr6.3:42880305-42880324 | None:intergenic | 40.0% | |
| ATAAGGGGACTAATCAGCTT+TGG | + | chr6.3:42880289-42880308 | None:intergenic | 40.0% | |
| ATCTAGTACGGAGAGAATGT+TGG | + | chr6.3:42877386-42877405 | None:intergenic | 40.0% | |
| ATTGTTGTAGTGGTGTGTTG+AGG | + | chr6.3:42877450-42877469 | None:intergenic | 40.0% | |
| CAACAAGTAGTTCGTTCAAC+TGG | - | chr6.3:42878465-42878484 | MS.gene059384:intron | 40.0% | |
| CAGCTACACAACAATCAACA+AGG | + | chr6.3:42879436-42879455 | None:intergenic | 40.0% | |
| GCTTTAGTGAGCACATTAGT+CGG | - | chr6.3:42878330-42878349 | MS.gene059384:intron | 40.0% | |
| GGATGTTGGAGAATCTAGTA+CGG | + | chr6.3:42877398-42877417 | None:intergenic | 40.0% | |
| GTAAAAATAGTACCAGTGGC+TGG | + | chr6.3:42879602-42879621 | None:intergenic | 40.0% | |
| GTTGTTCCTGGAATTCTTAC+CGG | - | chr6.3:42880990-42881009 | MS.gene059384:CDS | 40.0% | |
| TGAATATACTTGGGGCAGTT+TGG | + | chr6.3:42880809-42880828 | None:intergenic | 40.0% | |
| TGGGAATCTTTAGTTGTTCC+TGG | - | chr6.3:42880978-42880997 | MS.gene059384:CDS | 40.0% | |
| ! | AAAGTTGCAGCAGCTCTAAT+GGG | - | chr6.3:42878826-42878845 | MS.gene059384:CDS | 40.0% |
| ! | ACAACACTTCGAGTTAAACG+AGG | + | chr6.3:42877495-42877514 | None:intergenic | 40.0% |
| ! | ATTACGATTGAAAGCGTGTC+TGG | - | chr6.3:42878551-42878570 | MS.gene059384:intron | 40.0% |
| ! | CTAATGGGTAGCTATATTGG+TGG | - | chr6.3:42878841-42878860 | MS.gene059384:CDS | 40.0% |
| ! | GCTCTAATGGGTAGCTATAT+TGG | - | chr6.3:42878838-42878857 | MS.gene059384:CDS | 40.0% |
| ! | GGAATTCTTACCGGCATTTT+TGG | - | chr6.3:42880999-42881018 | MS.gene059384:CDS | 40.0% |
| ! | TAAATAGTATAGGGGCACAG+TGG | + | chr6.3:42878187-42878206 | None:intergenic | 40.0% |
| ! | TGTGTTTGGGCCAGAATTTT+TGG | - | chr6.3:42879666-42879685 | MS.gene059384:intron | 40.0% |
| ! | TTCAACTGGAACGCTTTTAG+TGG | - | chr6.3:42878479-42878498 | MS.gene059384:intron | 40.0% |
| !!! | ATCTTCAGCATTGGTGCTTT+TGG | - | chr6.3:42877582-42877601 | MS.gene059384:CDS | 40.0% |
| !!! | CAGGTATTTTTTGTGGTGGT+TGG | - | chr6.3:42880756-42880775 | MS.gene059384:intron | 40.0% |
| !!! | GCTAGCTAGTTTTGGTTTCT+TGG | - | chr6.3:42879343-42879362 | MS.gene059384:intron | 40.0% |
| !!! | TCTTCAGCATTGGTGCTTTT+GGG | - | chr6.3:42877583-42877602 | MS.gene059384:CDS | 40.0% |
| AAAATAGTACCAGTGGCTGG+TGG | + | chr6.3:42879599-42879618 | None:intergenic | 45.0% | |
| AACAGCTTGTGGAATGGCTA+AGG | - | chr6.3:42880947-42880966 | MS.gene059384:CDS | 45.0% | |
| AACTCTCTGCAGTCACTAAC+AGG | - | chr6.3:42879153-42879172 | MS.gene059384:intron | 45.0% | |
| AAGGACAACAACTGAATCCG+CGG | + | chr6.3:42878082-42878101 | None:intergenic | 45.0% | |
| AATGGCTAAGGCTAAAGGCT+GGG | - | chr6.3:42880959-42880978 | MS.gene059384:CDS | 45.0% | |
| ACGATGATTGCAGTTACTCC+TGG | + | chr6.3:42880247-42880266 | None:intergenic | 45.0% | |
| AGGAGTTGAGTCTAGTGGAA+GGG | - | chr6.3:42879173-42879192 | MS.gene059384:intron | 45.0% | |
| AGGCAAGATGTAGGCAAATG+TGG | - | chr6.3:42879893-42879912 | MS.gene059384:CDS | 45.0% | |
| AGGTTCCTTTGACAGATACG+AGG | + | chr6.3:42877475-42877494 | None:intergenic | 45.0% | |
| ATACAAGGAGGAACTCTTCC+AGG | - | chr6.3:42880226-42880245 | MS.gene059384:intron | 45.0% | |
| ATTAGTCCCCTTATACCTGC+TGG | - | chr6.3:42880295-42880314 | MS.gene059384:intron | 45.0% | |
| CAAACACCCCAATGATCATC+AGG | + | chr6.3:42877555-42877574 | None:intergenic | 45.0% | |
| CAGAGGTTGAAGTAGCTGAA+TGG | + | chr6.3:42877875-42877894 | None:intergenic | 45.0% | |
| CAGTATGACCAGCAGGTATA+AGG | + | chr6.3:42880306-42880325 | None:intergenic | 45.0% | |
| CCATTCCACAAGCTGTTGTA+GGG | + | chr6.3:42880944-42880963 | None:intergenic | 45.0% | |
| CGGACATGAATTGAGGATGT+TGG | + | chr6.3:42877412-42877431 | None:intergenic | 45.0% | |
| CTAACAGGAGTTGAGTCTAG+TGG | - | chr6.3:42879168-42879187 | MS.gene059384:intron | 45.0% | |
| GAATATGCAGGTGCATCATG+TGG | + | chr6.3:42878384-42878403 | None:intergenic | 45.0% | |
| GAGAATGTTGGAGTGATACG+TGG | + | chr6.3:42877374-42877393 | None:intergenic | 45.0% | |
| GATCTCTTGGTCCTGATAAC+TGG | - | chr6.3:42878803-42878822 | MS.gene059384:CDS | 45.0% | |
| GCAGTCTACAATCGCAATTG+CGG | + | chr6.3:42879961-42879980 | None:intergenic | 45.0% | |
| GCATCAAACGCGAATATTGG+CGG | - | chr6.3:42880918-42880937 | MS.gene059384:CDS | 45.0% | |
| GCTGCAACTTTCCAGTTATC+AGG | + | chr6.3:42878817-42878836 | None:intergenic | 45.0% | |
| GTAGGCAAATGTGGTCACAA+TGG | - | chr6.3:42879902-42879921 | MS.gene059384:CDS | 45.0% | |
| GTATGACCAGCAGGTATAAG+GGG | + | chr6.3:42880304-42880323 | None:intergenic | 45.0% | |
| TCAGGACCAAGAGATCTCAT+AGG | + | chr6.3:42878799-42878818 | None:intergenic | 45.0% | |
| TGAGGTTGTAGTACGAGGTT+CGG | + | chr6.3:42877432-42877451 | None:intergenic | 45.0% | |
| TGGTCTGCTATCTTCAGCAT+TGG | - | chr6.3:42877573-42877592 | MS.gene059384:CDS | 45.0% | |
| TGTCAGACATCAACGCATGT+TGG | + | chr6.3:42878580-42878599 | None:intergenic | 45.0% | |
| TGTGGAATGGCTAAGGCTAA+AGG | - | chr6.3:42880954-42880973 | MS.gene059384:CDS | 45.0% | |
| TGTGTTGAGGTTGTAGTACG+AGG | + | chr6.3:42877437-42877456 | None:intergenic | 45.0% | |
| TGTTACCTGCATCAAGACCA+AGG | + | chr6.3:42880332-42880351 | None:intergenic | 45.0% | |
| ! | AATCAGCTTTGGTGCAAGAG+TGG | + | chr6.3:42880278-42880297 | None:intergenic | 45.0% |
| ! | CTGATGATCATTGGGGTGTT+TGG | - | chr6.3:42877553-42877572 | MS.gene059384:CDS | 45.0% |
| ! | GAAAGTTGCAGCAGCTCTAA+TGG | - | chr6.3:42878825-42878844 | MS.gene059384:CDS | 45.0% |
| !! | GATGAGTCGCTAGCTAGTTT+TGG | - | chr6.3:42879335-42879354 | MS.gene059384:intron | 45.0% |
| !! | GGACTTGCTGCAAGTAATCT+TGG | - | chr6.3:42878351-42878370 | MS.gene059384:intron | 45.0% |
| !!! | ATCAGTTTTAGCTGCAGGAG+TGG | - | chr6.3:42879496-42879515 | MS.gene059384:intron | 45.0% |
| !!! | GCATTGGTGCTTTTGGGATT+TGG | - | chr6.3:42877589-42877608 | MS.gene059384:CDS | 45.0% |
| !!! | TCTGCATCAGTTTTAGCTGC+AGG | - | chr6.3:42879491-42879510 | MS.gene059384:intron | 45.0% |
| !!! | TTAGTTTTAAACTGCGGCCG+CGG | - | chr6.3:42878062-42878081 | MS.gene059384:CDS | 45.0% |
| AAGGCAACAGTATGACCAGC+AGG | + | chr6.3:42880313-42880332 | None:intergenic | 50.0% | |
| AGAAACAGACACCACGACAC+TGG | + | chr6.3:42878650-42878669 | None:intergenic | 50.0% | |
| CAGGAGTTGAGTCTAGTGGA+AGG | - | chr6.3:42879172-42879191 | MS.gene059384:intron | 50.0% | |
| CCCTACAACAGCTTGTGGAA+TGG | - | chr6.3:42880941-42880960 | MS.gene059384:CDS | 50.0% | |
| CGAGGTTCGGACATGAATTG+AGG | + | chr6.3:42877419-42877438 | None:intergenic | 50.0% | |
| CGCAATTGCGGCTGCAATAT+AGG | + | chr6.3:42879949-42879968 | None:intergenic | 50.0% | |
| GAATGGCTAAGGCTAAAGGC+TGG | - | chr6.3:42880958-42880977 | MS.gene059384:CDS | 50.0% | |
| GAGAGAGAACAGTGACAGGT+GGG | + | chr6.3:42877329-42877348 | None:intergenic | 50.0% | |
| GCACAATGACTGCAATCGCA+AGG | + | chr6.3:42878101-42878120 | None:intergenic | 50.0% | |
| GCAGTAGCTGTCTGTAACAC+AGG | + | chr6.3:42880148-42880167 | None:intergenic | 50.0% | |
| GCCATTCCACAAGCTGTTGT+AGG | + | chr6.3:42880945-42880964 | None:intergenic | 50.0% | |
| GGAGTTGAGTCTAGTGGAAG+GGG | - | chr6.3:42879174-42879193 | MS.gene059384:intron | 50.0% | |
| GGCAAATGTGGTCACAATGG+TGG | - | chr6.3:42879905-42879924 | MS.gene059384:CDS | 50.0% | |
| GTGGCTTTCTTACTTGGGTC+AGG | - | chr6.3:42878498-42878517 | MS.gene059384:intron | 50.0% | |
| TGCTGGTCATACTGTTGCCT+TGG | - | chr6.3:42880312-42880331 | MS.gene059384:intron | 50.0% | |
| TTTGTGGTGGTTGGAGCTAG+TGG | - | chr6.3:42880765-42880784 | MS.gene059384:intron | 50.0% | |
| ! | CAAACCAAGCGCCTCTGAAA+TGG | + | chr6.3:42879471-42879490 | None:intergenic | 50.0% |
| !! | TGTTGCCTTGGTCTTGATGC+AGG | - | chr6.3:42880324-42880343 | MS.gene059384:intron | 50.0% |
| CAGTGACAGGTGGGTGTTTG+AGG | + | chr6.3:42877320-42877339 | None:intergenic | 55.0% | |
| GGAGAGAGAACAGTGACAGG+TGG | + | chr6.3:42877330-42877349 | None:intergenic | 55.0% | |
| GGAGTGATACGTGGCGTGAT+GGG | + | chr6.3:42877365-42877384 | None:intergenic | 55.0% | |
| GGTGGAGAGAGAACAGTGAC+AGG | + | chr6.3:42877333-42877352 | None:intergenic | 55.0% | |
| TGGAGTGATACGTGGCGTGA+TGG | + | chr6.3:42877366-42877385 | None:intergenic | 55.0% | |
| ! | GATACGTGGCGTGATGGGAT+TGG | + | chr6.3:42877360-42877379 | None:intergenic | 55.0% |
| ! | GTCTAGTGGAAGGGGCTAGT+CGG | - | chr6.3:42879182-42879201 | MS.gene059384:intron | 55.0% |
| !! | CGTGATGGGATTGGTTGTGG+TGG | + | chr6.3:42877351-42877370 | None:intergenic | 55.0% |
| !! | GTTGCCATTTCAGAGGCGCT+TGG | - | chr6.3:42879464-42879483 | MS.gene059384:intron | 55.0% |
| !! | TGGCGTGATGGGATTGGTTG+TGG | + | chr6.3:42877354-42877373 | None:intergenic | 55.0% |
| !! | GGGGCTAGTCGGACACAATG+TGG | - | chr6.3:42879193-42879212 | MS.gene059384:intron | 60.0% |
| GAGACTGCACCACCAGCCAC+TGG | - | chr6.3:42879587-42879606 | MS.gene059384:CDS | 65.0% | |
| GGCGGCCCTACAACAGCTTG+TGG | - | chr6.3:42880936-42880955 | MS.gene059384:CDS | 65.0% | |
| ! | GCTGGTGGTGCAGTCTCTGC+GGG | + | chr6.3:42879584-42879603 | None:intergenic | 65.0% |
| ! | GGCTGGTGGTGCAGTCTCTG+CGG | + | chr6.3:42879585-42879604 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.3 | gene | 42877309 | 42881082 | 42877309 | ID=MS.gene059384 |
| chr6.3 | mRNA | 42877309 | 42881082 | 42877309 | ID=MS.gene059384.t1;Parent=MS.gene059384 |
| chr6.3 | exon | 42880817 | 42881082 | 42880817 | ID=MS.gene059384.t1.exon1;Parent=MS.gene059384.t1 |
| chr6.3 | CDS | 42880817 | 42881082 | 42880817 | ID=cds.MS.gene059384.t1;Parent=MS.gene059384.t1 |
| chr6.3 | exon | 42879872 | 42880098 | 42879872 | ID=MS.gene059384.t1.exon2;Parent=MS.gene059384.t1 |
| chr6.3 | CDS | 42879872 | 42880098 | 42879872 | ID=cds.MS.gene059384.t1;Parent=MS.gene059384.t1 |
| chr6.3 | exon | 42879526 | 42879636 | 42879526 | ID=MS.gene059384.t1.exon3;Parent=MS.gene059384.t1 |
| chr6.3 | CDS | 42879526 | 42879636 | 42879526 | ID=cds.MS.gene059384.t1;Parent=MS.gene059384.t1 |
| chr6.3 | exon | 42878783 | 42878938 | 42878783 | ID=MS.gene059384.t1.exon4;Parent=MS.gene059384.t1 |
| chr6.3 | CDS | 42878783 | 42878938 | 42878783 | ID=cds.MS.gene059384.t1;Parent=MS.gene059384.t1 |
| chr6.3 | exon | 42878046 | 42878287 | 42878046 | ID=MS.gene059384.t1.exon5;Parent=MS.gene059384.t1 |
| chr6.3 | CDS | 42878046 | 42878287 | 42878046 | ID=cds.MS.gene059384.t1;Parent=MS.gene059384.t1 |
| chr6.3 | exon | 42877309 | 42877632 | 42877309 | ID=MS.gene059384.t1.exon6;Parent=MS.gene059384.t1 |
| chr6.3 | CDS | 42877309 | 42877632 | 42877309 | ID=cds.MS.gene059384.t1;Parent=MS.gene059384.t1 |
| Gene Sequence |
| Protein sequence |
