AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene32232


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene32232.t1 MTR_8g059435 86.183 427 29 4 1 401 1 423 0.0 719
MS.gene32232.t1 MTR_6g007607 27.211 441 242 18 2 399 45 449 3.57e-27 112
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene32232.t1 AT3G15520 56.156 463 132 8 1 399 1 456 1.41e-161 463
MS.gene32232.t1 AT3G15520 56.156 463 132 8 1 399 1 456 1.41e-161 463
MS.gene32232.t1 AT3G15520 66.139 316 80 2 111 399 1 316 3.68e-142 408
MS.gene32232.t1 AT3G15520 50.404 371 125 8 1 319 1 364 9.35e-104 312
MS.gene32232.t1 AT3G01480 25.592 422 266 11 15 399 21 431 4.31e-29 118
MS.gene32232.t1 AT3G01480 25.868 317 206 9 15 311 21 328 1.63e-17 84.0

Find 109 sgRNAs with CRISPR-Local

Find 349 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCTGCATCCTGTTCCTTTA+TGG 0.082861 8.4:+48505360 None:intergenic
GCAAAATTCCCTGCAGTTAA+AGG 0.157758 8.4:+48504347 None:intergenic
GTTCTGCCTCTATCTGTTTA+TGG 0.176620 8.4:-48503150 MS.gene32232:CDS
GCCTTCATGTTAGGGCTTGC+AGG 0.251495 8.4:+48507405 None:intergenic
TGGTGCATTCACTTTATAGA+TGG 0.279268 8.4:-48505842 MS.gene32232:CDS
ACCTGTATGGCCTTCATGTT+AGG 0.302845 8.4:+48507396 None:intergenic
AGAGCAACTTCACCAGTTCT+AGG 0.313603 8.4:+48507441 None:intergenic
CATCGTCACATTGGCCTAAT+TGG 0.331013 8.4:+48507616 None:intergenic
TCGGCAACACAAGGCGGTCT+TGG 0.340467 8.4:+48502609 None:intergenic
ACTGAACGGTGGAAGCAATT+AGG 0.367614 8.4:+48507535 None:intergenic
CCTCTGTTGTAGGCCGGCTT+AGG 0.375646 8.4:-48502848 MS.gene32232:intron
CCTGTTCCTTTATGGATTGA+AGG 0.378050 8.4:+48505368 None:intergenic
TGAAGGAAAAGGGCCCTCTT+TGG 0.385735 8.4:-48505862 MS.gene32232:CDS
GAACTGGTGAAGTTGCTCTT+AGG 0.391945 8.4:-48507437 MS.gene32232:CDS
TTCCGAGAGAATAGCTTGAT+TGG 0.392537 8.4:+48503377 None:intergenic
TGCTTCACAAAGAGCCAATT+AGG 0.405413 8.4:-48507630 MS.gene32232:CDS
CACCGTTCAGTTCAGTTCCA+TGG 0.406317 8.4:-48507523 MS.gene32232:CDS
CCCTAACATGAAGGCCATAC+AGG 0.417871 8.4:-48507397 MS.gene32232:intron
CCTTCAATCCATAAAGGAAC+AGG 0.418865 8.4:-48505368 MS.gene32232:CDS
CTGTTGTAGGCCGGCTTAGG+AGG 0.421036 8.4:-48502845 MS.gene32232:intron
AGATGAAAAGGATTCTATAT+TGG 0.426146 8.4:-48505903 MS.gene32232:CDS
GTGATGGATGGAGCATATAA+TGG 0.428328 8.4:-48503417 MS.gene32232:CDS
TTCCCCTCCATTGTTCCATA+AGG 0.429471 8.4:+48506601 None:intergenic
ACCACTTGTCTTATCTAGTC+CGG 0.433802 8.4:+48503353 None:intergenic
ATTCCACAGAGGAAACCTTA+TGG 0.445351 8.4:-48506616 MS.gene32232:CDS
TATTCAGCTCCTTTAACTGC+AGG 0.448722 8.4:-48504356 MS.gene32232:CDS
CGTTCCGCAAAGCTTATTGA+AGG 0.449931 8.4:-48502632 MS.gene32232:CDS
TTAGATAGCGGTAGATGAAA+AGG 0.452704 8.4:-48505915 MS.gene32232:intron
TAAACAGATAGAGGCAGAAC+TGG 0.454960 8.4:+48503153 None:intergenic
AGTTCTCCTTCAATCCATAA+AGG 0.455076 8.4:-48505374 MS.gene32232:CDS
CAAGCTATTCTCTCGGAAAC+CGG 0.460980 8.4:-48503372 MS.gene32232:CDS
CCTGTATGGCCTTCATGTTA+GGG 0.464546 8.4:+48507397 None:intergenic
GACTTTGTGTGGCGGAAGAA+AGG 0.481623 8.4:+48507669 None:intergenic
GTCTTACAGTGCTCCTGAGC+AGG 0.486546 8.4:-48502565 MS.gene32232:CDS
GACACAAAGGTTCCTAGAAC+TGG 0.487336 8.4:-48507453 MS.gene32232:CDS
GTTCTAGGAACCTTTGTGTC+CGG 0.488880 8.4:+48507456 None:intergenic
TTGGCCTTCAATAAGCTTTG+CGG 0.489836 8.4:+48502628 None:intergenic
ACCAGCGGAACTGAAGGAAA+AGG 0.490508 8.4:-48505873 MS.gene32232:CDS
CAATATCCAGTGTAGATTGA+AGG 0.492806 8.4:+48505323 None:intergenic
CTTAGGAGGGATATCATTTG+AGG 0.495914 8.4:-48502831 MS.gene32232:CDS
TACAGAATCGCATTCGCAGC+GGG 0.497810 8.4:+48507483 None:intergenic
AGAACAAAACACAACCTGTA+TGG 0.501201 8.4:+48507383 None:intergenic
TGTTTATGGAGCAGTTGCTA+TGG 0.502880 8.4:-48503136 MS.gene32232:CDS
AAAGGGTGGTGGCGAGTGAT+CGG 0.512904 8.4:+48507687 None:intergenic
AGCAGAACTAGAGACATTAC+AGG 0.516026 8.4:-48505299 MS.gene32232:intron
ACTGCTCCATAAACAGATAG+AGG 0.517132 8.4:+48503144 None:intergenic
AAATGATATCCCTCCTAAGC+CGG 0.522397 8.4:+48502835 None:intergenic
GCGAGTGATCGGAATGTTGA+AGG 0.523573 8.4:+48507698 None:intergenic
ACTTTGTGTGGCGGAAGAAA+GGG 0.525426 8.4:+48507670 None:intergenic
ATGTGCAGATATACCACCAT+AGG 0.525447 8.4:-48502695 MS.gene32232:intron
AAGACGTACTCAACTTCCTT+CGG 0.525573 8.4:+48502590 None:intergenic
GGTGCATTCACTTTATAGAT+GGG 0.528764 8.4:-48505841 MS.gene32232:CDS
TCCAGCGGGCATTATTTCCA+AGG 0.533277 8.4:+48503320 None:intergenic
CCAGCGGAACTGAAGGAAAA+GGG 0.533342 8.4:-48505872 MS.gene32232:CDS
TGTTGAGTTTATCATTGAGA+AGG 0.541316 8.4:-48504854 MS.gene32232:CDS
TTCCAATCAAGCTATTCTCT+CGG 0.543467 8.4:-48503379 MS.gene32232:CDS
CCTTCATGTTAGGGCTTGCA+GGG 0.543469 8.4:+48507406 None:intergenic
TTCGAGAAGGTGACTTTGTG+TGG 0.543630 8.4:+48507658 None:intergenic
GGAGGGATATCATTTGAGGA+AGG 0.545622 8.4:-48502827 MS.gene32232:CDS
TCTGTATTCGCCGGACACAA+AGG 0.546228 8.4:-48507466 MS.gene32232:CDS
CCCTGCAAGCCCTAACATGA+AGG 0.549248 8.4:-48507406 MS.gene32232:CDS
AAGATATTTCGTATCTGCTG+AGG 0.558328 8.4:-48506639 MS.gene32232:CDS
ACGGTGGAAGCAATTAGGAT+TGG 0.562553 8.4:+48507540 None:intergenic
TAAAGTGAATGCACCAAAGA+GGG 0.562586 8.4:+48505849 None:intergenic
ATATTGCGGCAACAGGCACC+TGG 0.563706 8.4:-48505158 MS.gene32232:intron
CATATCCTTTAGGTGATGGA+TGG 0.564081 8.4:-48503429 MS.gene32232:intron
CGCAACAGAAAAGATAGACC+AGG 0.565347 8.4:+48505140 None:intergenic
ATAAAGTGAATGCACCAAAG+AGG 0.565722 8.4:+48505848 None:intergenic
TGTTGTAGGCCGGCTTAGGA+GGG 0.566790 8.4:-48502844 MS.gene32232:intron
GGCTCATAACGAAGCTTCTG+AGG 0.571419 8.4:-48503115 MS.gene32232:CDS
CCAGCGGGCATTATTTCCAA+GGG 0.572993 8.4:+48503321 None:intergenic
CATTCACTTTATAGATGGGA+AGG 0.573653 8.4:-48505837 MS.gene32232:intron
AAGTATACCAGCGGAACTGA+AGG 0.574421 8.4:-48505879 MS.gene32232:CDS
AAGTGGTTACAATGTTCCCT+TGG 0.582253 8.4:-48503337 MS.gene32232:CDS
GAGAATATCTCTCCCTATGG+TGG 0.583172 8.4:+48502682 None:intergenic
GAGGGATATCATTTGAGGAA+GGG 0.583536 8.4:-48502826 MS.gene32232:CDS
AAACCTTATGGAACAATGGA+GGG 0.584507 8.4:-48506604 MS.gene32232:CDS
GGGGAGAATATCTCTCCCTA+TGG 0.590339 8.4:+48502679 None:intergenic
TGTGAACCTTCAATCTACAC+TGG 0.593107 8.4:-48505329 MS.gene32232:CDS
GTTCCATAAGGTTTCCTCTG+TGG 0.593482 8.4:+48506613 None:intergenic
TGCGGAACGAATGATATCCC+CGG 0.594728 8.4:+48502646 None:intergenic
GTTTATCATTGAGAAGGAGA+CGG 0.604486 8.4:-48504848 MS.gene32232:CDS
CTGACGTGTCATCGTCACAT+TGG 0.604736 8.4:+48507607 None:intergenic
ATTCAGCTCCTTTAACTGCA+GGG 0.605738 8.4:-48504355 MS.gene32232:CDS
CAACTTCCTTCGGCAACACA+AGG 0.609119 8.4:+48502600 None:intergenic
GAAACCTTATGGAACAATGG+AGG 0.616389 8.4:-48506605 MS.gene32232:CDS
AGACCGCCTTGTGTTGCCGA+AGG 0.619816 8.4:-48502606 MS.gene32232:CDS
AGAAGACACGTAAGGAACCA+TGG 0.625125 8.4:+48507506 None:intergenic
TGTGGCGGAAGAAAGGGTGG+TGG 0.625221 8.4:+48507676 None:intergenic
GAGGAAACCTTATGGAACAA+TGG 0.627363 8.4:-48506608 MS.gene32232:CDS
AACCTTATGGAACAATGGAG+GGG 0.632285 8.4:-48506603 MS.gene32232:CDS
GTGAAGCAGAATATTCGAGA+AGG 0.633649 8.4:+48507645 None:intergenic
TGTGACGATGACACGTCAGT+TGG 0.634510 8.4:-48507603 MS.gene32232:CDS
TGCTCAGGAGCACTGTAAGA+CGG 0.634553 8.4:+48502567 None:intergenic
TTGTGTGGCGGAAGAAAGGG+TGG 0.634669 8.4:+48507673 None:intergenic
TGTGCAGATATACCACCATA+GGG 0.644025 8.4:-48502694 MS.gene32232:intron
GGCAATACACGGAATATCCA+CGG 0.644795 8.4:-48505115 MS.gene32232:intron
GAATGCGATTCTGTATTCGC+CGG 0.647570 8.4:-48507475 MS.gene32232:CDS
ATGTTGAAGGAAGAAGAGAG+AGG 0.656967 8.4:+48507711 None:intergenic
AACCATGGAACTGAACTGAA+CGG 0.659365 8.4:+48507521 None:intergenic
GCAGCGGGAGAAGACACGTA+AGG 0.664077 8.4:+48507498 None:intergenic
ACCGGACTAGATAAGACAAG+TGG 0.667393 8.4:-48503354 MS.gene32232:CDS
CGTCAGTTGGTATAACTCTG+AGG 0.670638 8.4:-48507590 MS.gene32232:CDS
GAGAAGGTGACTTTGTGTGG+CGG 0.672767 8.4:+48507661 None:intergenic
CTTCCTTCGGCAACACAAGG+CGG 0.674592 8.4:+48502603 None:intergenic
ATACAGAATCGCATTCGCAG+CGG 0.692269 8.4:+48507482 None:intergenic
TATATTGGCAAGTATACCAG+CGG 0.697073 8.4:-48505888 MS.gene32232:CDS
CATGGAACTGAACTGAACGG+TGG 0.719811 8.4:+48507524 None:intergenic
ATCTGCTGAGGATTCCACAG+AGG 0.751616 8.4:-48506627 MS.gene32232:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAAAAAAGATTACTAATT+AGG + chr8.4:48507407-48507426 None:intergenic 10.0%
!!! AATATTTTAATAAACTTATG+TGG - chr8.4:48502969-48502988 MS.gene32232:intron 10.0%
!!! ATTTTAAGAAAACAAATATA+AGG + chr8.4:48507275-48507294 None:intergenic 10.0%
!! ATAAAAAGTTCATGATTAAT+AGG + chr8.4:48506184-48506203 None:intergenic 15.0%
!! TGAAATAGTTAATTGTAAAT+TGG - chr8.4:48503309-48503328 MS.gene32232:intron 15.0%
!! TTAATGTGAAACTAATATAA+GGG - chr8.4:48506507-48506526 MS.gene32232:intron 15.0%
!! TTTAATGTGAAACTAATATA+AGG - chr8.4:48506506-48506525 MS.gene32232:intron 15.0%
!!! AAATTTCAAGTAGAAAATAT+AGG + chr8.4:48506392-48506411 None:intergenic 15.0%
!!! AATCAAAATATTGCAAATTT+TGG + chr8.4:48503507-48503526 None:intergenic 15.0%
!!! CTCTTTTTTGTTTTTATTTT+GGG - chr8.4:48507559-48507578 MS.gene32232:CDS 15.0%
!!! TCTCTTTTTTGTTTTTATTT+TGG - chr8.4:48507558-48507577 MS.gene32232:CDS 15.0%
!!! TCTTTTTTGTTTTTATTTTG+GGG - chr8.4:48507560-48507579 MS.gene32232:CDS 15.0%
!!! TTGAAAATTTTTAGATTAGA+GGG + chr8.4:48503273-48503292 None:intergenic 15.0%
!! AAAATAGTTAAACCTCAAAA+TGG + chr8.4:48507532-48507551 None:intergenic 20.0%
!! AGATAGAAGAAAAATTGATA+AGG + chr8.4:48507204-48507223 None:intergenic 20.0%
!! ATACAATTAATCAAATATCG+AGG + chr8.4:48504489-48504508 None:intergenic 20.0%
!! ATATGTTGAAAATGATCAAA+TGG - chr8.4:48503455-48503474 MS.gene32232:intron 20.0%
!! CAATTGAAAAGAAAAAACAA+AGG + chr8.4:48507378-48507397 None:intergenic 20.0%
!! CTATGATAAAAGAAATGTAA+GGG - chr8.4:48507224-48507243 MS.gene32232:intron 20.0%
!! CTTAAAAATGTATTTGTAAG+TGG + chr8.4:48506794-48506813 None:intergenic 20.0%
!! TCAATGTAACACTTATATTA+TGG - chr8.4:48505079-48505098 MS.gene32232:intron 20.0%
!! TCTATGATAAAAGAAATGTA+AGG - chr8.4:48507223-48507242 MS.gene32232:intron 20.0%
!!! AAAATTACTTGTTTTGCTTT+TGG - chr8.4:48506251-48506270 MS.gene32232:intron 20.0%
!!! AAATTACTTGTTTTGCTTTT+GGG - chr8.4:48506252-48506271 MS.gene32232:intron 20.0%
!!! AATTTTCATAAATGCATTGA+CGG - chr8.4:48505636-48505655 MS.gene32232:intron 20.0%
!!! ACACTAATGTTGTTTTATAA+AGG + chr8.4:48506998-48507017 None:intergenic 20.0%
!!! ATATTTTTCTGTTAGAAAGA+AGG + chr8.4:48504526-48504545 None:intergenic 20.0%
!!! ATGAAAAATCACTGATTATT+AGG - chr8.4:48504072-48504091 MS.gene32232:intron 20.0%
!!! ATTGATTCAGTCATTTTAAT+TGG + chr8.4:48505064-48505083 None:intergenic 20.0%
!!! CACTAATGTTGTTTTATAAA+GGG + chr8.4:48506997-48507016 None:intergenic 20.0%
!!! CACTTACAAATACATTTTTA+AGG - chr8.4:48506792-48506811 MS.gene32232:intron 20.0%
!!! CATCTTCATAATTTTTTTGT+AGG - chr8.4:48505388-48505407 MS.gene32232:CDS 20.0%
!!! CATGTTTTTAAAACTAGAAT+GGG - chr8.4:48507351-48507370 MS.gene32232:intron 20.0%
!!! CTTGAAAATTTTTAGATTAG+AGG + chr8.4:48503274-48503293 None:intergenic 20.0%
!!! TATTTATTTTGAGATAAGCT+TGG - chr8.4:48505688-48505707 MS.gene32232:intron 20.0%
!!! TCATGTTTTTAAAACTAGAA+TGG - chr8.4:48507350-48507369 MS.gene32232:intron 20.0%
!!! TGATTTATTTGTTATGTACA+AGG - chr8.4:48502940-48502959 MS.gene32232:intron 20.0%
!!! TGTTCATTTTTTTACTTGAA+TGG - chr8.4:48506118-48506137 MS.gene32232:intron 20.0%
!!! TTCTTTGCTAAAACTTATTT+TGG - chr8.4:48505763-48505782 MS.gene32232:intron 20.0%
!!! TTTATTCTAAAAATAGCCTT+TGG - chr8.4:48503347-48503366 MS.gene32232:CDS 20.0%
!!! TTTGTTATATAATTCTCACA+TGG - chr8.4:48504824-48504843 MS.gene32232:intron 20.0%
! AAATTCAATAGTCAGAAGAA+GGG - chr8.4:48505354-48505373 MS.gene32232:CDS 25.0%
! AATATATGAAAAGACACCAA+AGG + chr8.4:48503366-48503385 None:intergenic 25.0%
! ACATTCTTAAACTTATGTTC+AGG - chr8.4:48506309-48506328 MS.gene32232:intron 25.0%
! ACGTCAAAATATACATTAGA+GGG + chr8.4:48505249-48505268 None:intergenic 25.0%
! AGATGAAAAGGATTCTATAT+TGG - chr8.4:48504379-48504398 MS.gene32232:intron 25.0%
! AGATGCATTATAAGAAATAC+TGG - chr8.4:48503794-48503813 MS.gene32232:intron 25.0%
! ATAAAACAACATTAGTGTAC+AGG - chr8.4:48507000-48507019 MS.gene32232:intron 25.0%
! ATAATCATAAGGACAAGTTA+TGG + chr8.4:48505524-48505543 None:intergenic 25.0%
! ATTCTTCTCACAATAAACAA+CGG - chr8.4:48503409-48503428 MS.gene32232:CDS 25.0%
! ATTTCACGTTTCAACATAAT+TGG - chr8.4:48504544-48504563 MS.gene32232:intron 25.0%
! CAAGATAGCATCATATTATT+TGG + chr8.4:48505018-48505037 None:intergenic 25.0%
! CAATCCATAAACATTAGAAA+AGG - chr8.4:48505579-48505598 MS.gene32232:intron 25.0%
! CATTAATTCAATTGAACAGA+GGG + chr8.4:48504126-48504145 None:intergenic 25.0%
! GGATATGTTTATGATGATTT+CGG - chr8.4:48504565-48504584 MS.gene32232:intron 25.0%
! TACCACTTTATTCATATAGT+AGG + chr8.4:48503918-48503937 None:intergenic 25.0%
! TACGTCAAAATATACATTAG+AGG + chr8.4:48505250-48505269 None:intergenic 25.0%
! TATAAGGAGAATATAGTAAC+TGG - chr8.4:48506362-48506381 MS.gene32232:intron 25.0%
! TATCATGGTTTATCCATATT+CGG - chr8.4:48506057-48506076 MS.gene32232:intron 25.0%
! TCATTAATTCAATTGAACAG+AGG + chr8.4:48504127-48504146 None:intergenic 25.0%
! TGAACATAAGTTTAAGAATG+TGG + chr8.4:48506310-48506329 None:intergenic 25.0%
! TGTTACAATGATACTAATTC+AGG - chr8.4:48503611-48503630 MS.gene32232:intron 25.0%
! TTAATAAACTTATGTGGTGA+AGG - chr8.4:48502975-48502994 MS.gene32232:intron 25.0%
! TTAATCTGATCTTGATATTG+CGG - chr8.4:48505110-48505129 MS.gene32232:intron 25.0%
! TTATGCAAAATAAGAGTGAA+AGG - chr8.4:48507299-48507318 MS.gene32232:intron 25.0%
!! AACAAATATAAGGCATTTAG+CGG + chr8.4:48507265-48507284 None:intergenic 25.0%
!! ATTAGAAAAGGTCCATTTTA+AGG - chr8.4:48505591-48505610 MS.gene32232:intron 25.0%
!! CATCTAAAATACTTAACCAT+GGG + chr8.4:48503779-48503798 None:intergenic 25.0%
!! GCGTGATAAATTTTTGTATA+AGG - chr8.4:48506346-48506365 MS.gene32232:intron 25.0%
!! GTGTCTTTTCATATATTTCT+TGG - chr8.4:48503369-48503388 MS.gene32232:CDS 25.0%
!! TATTTTCTTATCTGTCCTTT+TGG - chr8.4:48507091-48507110 MS.gene32232:intron 25.0%
!! TTTATGGATTGTTTAAGAGT+AGG + chr8.4:48505570-48505589 None:intergenic 25.0%
!!! AAAACTTATTTTGGAATGGA+TGG - chr8.4:48505772-48505791 MS.gene32232:intron 25.0%
!!! AATTTTTTTGTAGGCTTTCA+GGG - chr8.4:48505397-48505416 MS.gene32232:intron 25.0%
!!! ATATTTTGATTCACATGAAG+AGG - chr8.4:48503516-48503535 MS.gene32232:intron 25.0%
!!! ATTTTGAGTGTTCCTTAAAA+TGG + chr8.4:48505606-48505625 None:intergenic 25.0%
!!! CATTACAAACTGATTTTGTA+GGG + chr8.4:48506758-48506777 None:intergenic 25.0%
!!! GAAAGTATTAGAAAGAAAGT+TGG - chr8.4:48504028-48504047 MS.gene32232:intron 25.0%
!!! GTGTTACTTTTTTTTGTTGT+AGG - chr8.4:48504783-48504802 MS.gene32232:intron 25.0%
!!! GTTGATTTTAATGATTAACG+AGG - chr8.4:48506420-48506439 MS.gene32232:intron 25.0%
!!! TAATTTTTTTGTAGGCTTTC+AGG - chr8.4:48505396-48505415 MS.gene32232:intron 25.0%
!!! TGCTAAAACTTATTTTGGAA+TGG - chr8.4:48505768-48505787 MS.gene32232:intron 25.0%
!!! TTCTTCCTTATTTTAGATAG+CGG - chr8.4:48504355-48504374 MS.gene32232:CDS 25.0%
AAAATAACTCTCGAGTTTAC+AGG - chr8.4:48503867-48503886 MS.gene32232:intron 30.0%
ACAACCAATGGATAATCATA+AGG + chr8.4:48505535-48505554 None:intergenic 30.0%
ACAATAAACAACGGTATACA+AGG - chr8.4:48503418-48503437 MS.gene32232:CDS 30.0%
ACATAACTGCAAATAGTAGT+TGG - chr8.4:48505809-48505828 MS.gene32232:intron 30.0%
AGGTTTCAATAATTCTTGTG+TGG - chr8.4:48503049-48503068 MS.gene32232:intron 30.0%
ATATAGAAGATGCAAACCAT+AGG - chr8.4:48503823-48503842 MS.gene32232:intron 30.0%
ATGCATTGAAAGTTTACTGT+TGG - chr8.4:48505846-48505865 MS.gene32232:CDS 30.0%
ATTAGAGGGAGTAACTAAAT+AGG + chr8.4:48503259-48503278 None:intergenic 30.0%
ATTTCGGTCAATTTAACTCA+GGG - chr8.4:48504581-48504600 MS.gene32232:intron 30.0%
CAAAGGCTTAAAAGATGTTA+TGG + chr8.4:48504208-48504227 None:intergenic 30.0%
CAAATTCAATAGTCAGAAGA+AGG - chr8.4:48505353-48505372 MS.gene32232:CDS 30.0%
CATTCTGATAGCTTCTATAA+TGG + chr8.4:48504860-48504879 None:intergenic 30.0%
GAAACAACGCTGTTAAATTT+GGG - chr8.4:48506722-48506741 MS.gene32232:intron 30.0%
GACCTACTATATGAATAAAG+TGG - chr8.4:48503913-48503932 MS.gene32232:intron 30.0%
GATATAAGCACAAGGTATAT+CGG + chr8.4:48504677-48504696 None:intergenic 30.0%
GATTAATAGGAAGTCAGTAA+TGG + chr8.4:48506171-48506190 None:intergenic 30.0%
GCATATATTGCTGTATAATG+TGG - chr8.4:48506636-48506655 MS.gene32232:CDS 30.0%
GCATTATAAGAAATACTGGA+GGG - chr8.4:48503798-48503817 MS.gene32232:intron 30.0%
GGAAATTATGTGTTGCAAAT+TGG - chr8.4:48506572-48506591 MS.gene32232:intron 30.0%
TAAGGCATATCTATCTAATG+TGG - chr8.4:48506810-48506829 MS.gene32232:intron 30.0%
TAATTCTCACATGGTAGTTA+TGG - chr8.4:48504833-48504852 MS.gene32232:CDS 30.0%
TATGGCAATATACAACTTTG+AGG - chr8.4:48506478-48506497 MS.gene32232:intron 30.0%
TCAGATGCAAACTTTATGAT+GGG - chr8.4:48503970-48503989 MS.gene32232:intron 30.0%
TGAAACAACGCTGTTAAATT+TGG - chr8.4:48506721-48506740 MS.gene32232:intron 30.0%
TGCATTATAAGAAATACTGG+AGG - chr8.4:48503797-48503816 MS.gene32232:intron 30.0%
TGTTGAGTTTATCATTGAGA+AGG - chr8.4:48505428-48505447 MS.gene32232:intron 30.0%
TTGTCCTTATGATTATCCAT+TGG - chr8.4:48505528-48505547 MS.gene32232:intron 30.0%
! AAGGGCAATTTTCAGTTTTT+GGG - chr8.4:48507474-48507493 MS.gene32232:CDS 30.0%
! AAGGTATATCGGCTATATAT+AGG + chr8.4:48504666-48504685 None:intergenic 30.0%
! AATATCCATCTAAAACAACC+TGG + chr8.4:48505910-48505929 None:intergenic 30.0%
! AATGATATGAGCATTTTGCA+GGG - chr8.4:48504876-48504895 MS.gene32232:intron 30.0%
! ACAAATATAAGGCATTTAGC+GGG + chr8.4:48507264-48507283 None:intergenic 30.0%
! ATATCTTCTGAACCATTTTG+AGG - chr8.4:48507517-48507536 MS.gene32232:CDS 30.0%
! ATCTACCGCTATCTAAAATA+AGG + chr8.4:48504363-48504382 None:intergenic 30.0%
! ATTGAATTTTACCTGAATGG+TGG + chr8.4:48505501-48505520 None:intergenic 30.0%
! CAATATACAACTTTGAGGAA+TGG - chr8.4:48506483-48506502 MS.gene32232:intron 30.0%
! CATAACATCTTTTAAGCCTT+TGG - chr8.4:48504206-48504225 MS.gene32232:intron 30.0%
! GCATCTAAAATACTTAACCA+TGG + chr8.4:48503780-48503799 None:intergenic 30.0%
! GTTTAATATCTGAAATCCCA+TGG - chr8.4:48503760-48503779 MS.gene32232:intron 30.0%
! TCAACTTTTAAACGAAACCT+TGG - chr8.4:48506448-48506467 MS.gene32232:intron 30.0%
! TGGACCTTTTCTAATGTTTA+TGG + chr8.4:48505586-48505605 None:intergenic 30.0%
! TGGATTGAATTTTACCTGAA+TGG + chr8.4:48505504-48505523 None:intergenic 30.0%
! TTATTCTTTTCCTCTGTTGT+AGG - chr8.4:48507424-48507443 MS.gene32232:CDS 30.0%
! TTCATTTTCATCGCTTATCA+TGG - chr8.4:48506042-48506061 MS.gene32232:intron 30.0%
!! GAACGTAAAGAAAGTTTTGA+AGG - chr8.4:48503701-48503720 MS.gene32232:intron 30.0%
!! GCATTACAAACTGATTTTGT+AGG + chr8.4:48506759-48506778 None:intergenic 30.0%
!!! AAACTGACATGTCATTTTGA+AGG + chr8.4:48505202-48505221 None:intergenic 30.0%
!!! GTTACATTTCTTTTGAAACC+CGG + chr8.4:48503237-48503256 None:intergenic 30.0%
AAAACAAGTCACGAGACATA+TGG - chr8.4:48503141-48503160 MS.gene32232:CDS 35.0%
AAACCTTATGGAACAATGGA+GGG - chr8.4:48503678-48503697 MS.gene32232:intron 35.0%
AAATGAAGAGCGATATACAC+TGG + chr8.4:48506029-48506048 None:intergenic 35.0%
AAGATATTTCGTATCTGCTG+AGG - chr8.4:48503643-48503662 MS.gene32232:intron 35.0%
AGAACAAAACACAACCTGTA+TGG + chr8.4:48502902-48502921 None:intergenic 35.0%
AGTTCTCCTTCAATCCATAA+AGG - chr8.4:48504908-48504927 MS.gene32232:intron 35.0%
ATAAAGTGAATGCACCAAAG+AGG + chr8.4:48504437-48504456 None:intergenic 35.0%
ATGAGAGCAATAAGGAAGTA+TGG - chr8.4:48506530-48506549 MS.gene32232:intron 35.0%
CAAGAATTATTGAAACCTCG+AGG + chr8.4:48503047-48503066 None:intergenic 35.0%
CAATAATTCTTGTGTGGAGT+CGG - chr8.4:48503055-48503074 MS.gene32232:intron 35.0%
CAATATCCAGTGTAGATTGA+AGG + chr8.4:48504962-48504981 None:intergenic 35.0%
CATAGGATTCATGTGCAATA+TGG - chr8.4:48503840-48503859 MS.gene32232:intron 35.0%
CATATTGCACATGAATCCTA+TGG + chr8.4:48503842-48503861 None:intergenic 35.0%
CATTCACTTTATAGATGGGA+AGG - chr8.4:48504445-48504464 MS.gene32232:intron 35.0%
CTCAGATGCAAACTTTATGA+TGG - chr8.4:48503969-48503988 MS.gene32232:intron 35.0%
CTGACTATTGAATTTGTCCA+AGG + chr8.4:48505349-48505368 None:intergenic 35.0%
GAAGTTGGAAGGAAATTGAA+AGG - chr8.4:48503107-48503126 MS.gene32232:CDS 35.0%
GATTTCGGTCAATTTAACTC+AGG - chr8.4:48504580-48504599 MS.gene32232:intron 35.0%
GGGTCTGTAAAATCTTAGAA+AGG + chr8.4:48504106-48504125 None:intergenic 35.0%
GGTGCATTCACTTTATAGAT+GGG - chr8.4:48504441-48504460 MS.gene32232:intron 35.0%
GTTTATCATTGAGAAGGAGA+CGG - chr8.4:48505434-48505453 MS.gene32232:intron 35.0%
TAAAGTGAATGCACCAAAGA+GGG + chr8.4:48504436-48504455 None:intergenic 35.0%
TATAAGGGATGAGAGCAATA+AGG - chr8.4:48506522-48506541 MS.gene32232:intron 35.0%
TATATTGGCAAGTATACCAG+CGG - chr8.4:48504394-48504413 MS.gene32232:intron 35.0%
TCATTCTTAGTGCAATTCCT+TGG - chr8.4:48505329-48505348 MS.gene32232:CDS 35.0%
TCGATCAAATCAACAACCAA+TGG + chr8.4:48505547-48505566 None:intergenic 35.0%
TGCAAAATAAGAGTGAAAGG+TGG - chr8.4:48507302-48507321 MS.gene32232:intron 35.0%
TGGAATCCACAAGACAAAAT+AGG - chr8.4:48503996-48504015 MS.gene32232:intron 35.0%
TGGTGCATTCACTTTATAGA+TGG - chr8.4:48504440-48504459 MS.gene32232:intron 35.0%
TTCCAATCAAGCTATTCTCT+CGG - chr8.4:48506903-48506922 MS.gene32232:intron 35.0%
TTGGAAGGAAATTGAAAGGT+TGG - chr8.4:48503111-48503130 MS.gene32232:CDS 35.0%
! AACGCTGTTAAATTTGGGTT+AGG - chr8.4:48506727-48506746 MS.gene32232:intron 35.0%
! ACTAGTCTCATGTCAAATGA+TGG + chr8.4:48505285-48505304 None:intergenic 35.0%
! AGGAGTAGTTAGTTTCTAAC+TGG - chr8.4:48503545-48503564 MS.gene32232:intron 35.0%
! ATGATATGAGCATTTTGCAG+GGG - chr8.4:48504877-48504896 MS.gene32232:intron 35.0%
! ATTTAGTTCACTCAGAGAAC+TGG + chr8.4:48506092-48506111 None:intergenic 35.0%
! CAAATATAAGGCATTTAGCG+GGG + chr8.4:48507263-48507282 None:intergenic 35.0%
! CTCATTCCTATTTTGTCTTG+TGG + chr8.4:48504005-48504024 None:intergenic 35.0%
! GAAAGTTTACTGTTGGTAGA+CGG - chr8.4:48505853-48505872 MS.gene32232:CDS 35.0%
! GAAGGGCAATTTTCAGTTTT+TGG - chr8.4:48507473-48507492 MS.gene32232:CDS 35.0%
! GAATGATATGAGCATTTTGC+AGG - chr8.4:48504875-48504894 MS.gene32232:CDS 35.0%
! GGAATTTTGCAAAACTGGTA+AGG - chr8.4:48505948-48505967 MS.gene32232:intron 35.0%
! TATTGCCATAGTTGTTTCCA+AGG + chr8.4:48506468-48506487 None:intergenic 35.0%
! TTAGATAGCGGTAGATGAAA+AGG - chr8.4:48504367-48504386 MS.gene32232:CDS 35.0%
! TTCTTATCTGTCCTTTTGGA+AGG - chr8.4:48507095-48507114 MS.gene32232:intron 35.0%
!! AGGTTGCTGATTCTTGAAAA+AGG - chr8.4:48504701-48504720 MS.gene32232:intron 35.0%
AAATGATATCCCTCCTAAGC+CGG + chr8.4:48507450-48507469 None:intergenic 40.0%
AACATTGGTGTGAAGTTGGA+AGG - chr8.4:48503096-48503115 MS.gene32232:CDS 40.0%
AACCATGGAACTGAACTGAA+CGG + chr8.4:48502764-48502783 None:intergenic 40.0%
AACCTTATGGAACAATGGAG+GGG - chr8.4:48503679-48503698 MS.gene32232:intron 40.0%
AAGACGTACTCAACTTCCTT+CGG + chr8.4:48507695-48507714 None:intergenic 40.0%
AAGTGGTTACAATGTTCCCT+TGG - chr8.4:48506945-48506964 MS.gene32232:intron 40.0%
ACCACTTGTCTTATCTAGTC+CGG + chr8.4:48506932-48506951 None:intergenic 40.0%
ACCTGTGTGATATAAGCACA+AGG + chr8.4:48504685-48504704 None:intergenic 40.0%
ACCTTGTGCTTATATCACAC+AGG - chr8.4:48504681-48504700 MS.gene32232:intron 40.0%
ACTAGAGACATTACAGGTGA+TGG - chr8.4:48504989-48505008 MS.gene32232:intron 40.0%
ACTGACAGTTAATTTCTGCC+AGG - chr8.4:48505889-48505908 MS.gene32232:CDS 40.0%
ACTGCTCCATAAACAGATAG+AGG + chr8.4:48507141-48507160 None:intergenic 40.0%
AGCAGAACTAGAGACATTAC+AGG - chr8.4:48504983-48505002 MS.gene32232:intron 40.0%
ATCTGAGCATCTCTGTAACA+TGG + chr8.4:48503956-48503975 None:intergenic 40.0%
ATCTGCATCCTGTTCCTTTA+TGG + chr8.4:48504925-48504944 None:intergenic 40.0%
ATGTGCAGATATACCACCAT+AGG - chr8.4:48507587-48507606 MS.gene32232:CDS 40.0%
ATGTTGAAGGAAGAAGAGAG+AGG + chr8.4:48502574-48502593 None:intergenic 40.0%
ATTCAGCTCCTTTAACTGCA+GGG - chr8.4:48505927-48505946 MS.gene32232:intron 40.0%
ATTCCACAGAGGAAACCTTA+TGG - chr8.4:48503666-48503685 MS.gene32232:intron 40.0%
ATTCTCCCCGAGATAAAAAC+CGG - chr8.4:48507617-48507636 MS.gene32232:CDS 40.0%
CCTTCAATCCATAAAGGAAC+AGG - chr8.4:48504914-48504933 MS.gene32232:intron 40.0%
CGAAACCTTGGAAACAACTA+TGG - chr8.4:48506460-48506479 MS.gene32232:intron 40.0%
CGCAAACATTTCAGTCAACT+AGG - chr8.4:48506211-48506230 MS.gene32232:intron 40.0%
CTGGTAAATCAGACCGAATA+TGG + chr8.4:48506073-48506092 None:intergenic 40.0%
CTTAGGAGGGATATCATTTG+AGG - chr8.4:48507451-48507470 MS.gene32232:CDS 40.0%
GAAACCTTATGGAACAATGG+AGG - chr8.4:48503677-48503696 MS.gene32232:intron 40.0%
GAGCGATATACACTGGATAT+TGG + chr8.4:48506022-48506041 None:intergenic 40.0%
GAGGAAACCTTATGGAACAA+TGG - chr8.4:48503674-48503693 MS.gene32232:intron 40.0%
GAGGGATATCATTTGAGGAA+GGG - chr8.4:48507456-48507475 MS.gene32232:CDS 40.0%
GCAAAATTCCCTGCAGTTAA+AGG + chr8.4:48505938-48505957 None:intergenic 40.0%
GTGAAGCAGAATATTCGAGA+AGG + chr8.4:48502640-48502659 None:intergenic 40.0%
GTTCTGCCTCTATCTGTTTA+TGG - chr8.4:48507132-48507151 MS.gene32232:intron 40.0%
TAAACAGATAGAGGCAGAAC+TGG + chr8.4:48507132-48507151 None:intergenic 40.0%
TATTCAGCTCCTTTAACTGC+AGG - chr8.4:48505926-48505945 MS.gene32232:intron 40.0%
TGCTTCACAAAGAGCCAATT+AGG - chr8.4:48502652-48502671 MS.gene32232:CDS 40.0%
TGTGAACCTTCAATCTACAC+TGG - chr8.4:48504953-48504972 MS.gene32232:intron 40.0%
TGTGCAGATATACCACCATA+GGG - chr8.4:48507588-48507607 MS.gene32232:CDS 40.0%
TGTTTATGGAGCAGTTGCTA+TGG - chr8.4:48507146-48507165 MS.gene32232:intron 40.0%
TTCACATGAAGAGGACTGAT+AGG - chr8.4:48503525-48503544 MS.gene32232:intron 40.0%
TTCCGAGAGAATAGCTTGAT+TGG + chr8.4:48506908-48506927 None:intergenic 40.0%
TTGGAACATTGGTGTGAAGT+TGG - chr8.4:48503092-48503111 MS.gene32232:CDS 40.0%
! AGCGTTGTTTCAGTAGATGA+TGG + chr8.4:48506713-48506732 None:intergenic 40.0%
! ATATCCCCGGTTTTTATCTC+GGG + chr8.4:48507626-48507645 None:intergenic 40.0%
! CATCTTTTAAGCCTTTGGTG+TGG - chr8.4:48504211-48504230 MS.gene32232:intron 40.0%
! CCTGTTCCTTTATGGATTGA+AGG + chr8.4:48504917-48504936 None:intergenic 40.0%
! CTGGTCTATCTTTTCTGTTG+CGG - chr8.4:48505143-48505162 MS.gene32232:CDS 40.0%
! GATATCCCCGGTTTTTATCT+CGG + chr8.4:48507627-48507646 None:intergenic 40.0%
! GGTTCAACATTTTCTCCAGT+TGG - chr8.4:48505455-48505474 MS.gene32232:intron 40.0%
! TCAACATTTTCTCCAGTTGG+TGG - chr8.4:48505458-48505477 MS.gene32232:intron 40.0%
! TGATATGAGCATTTTGCAGG+GGG - chr8.4:48504878-48504897 MS.gene32232:intron 40.0%
! TGCAGGGAATTTTGCAAAAC+TGG - chr8.4:48505943-48505962 MS.gene32232:intron 40.0%
! TGGTCTATCTTTTCTGTTGC+GGG - chr8.4:48505144-48505163 MS.gene32232:CDS 40.0%
! TTGGCCTTCAATAAGCTTTG+CGG + chr8.4:48507657-48507676 None:intergenic 40.0%
!! AGGAAGTCAGTAATGGATTC+AGG + chr8.4:48506164-48506183 None:intergenic 40.0%
!! GCAAACTTTATGATGGGTCA+TGG - chr8.4:48503976-48503995 MS.gene32232:intron 40.0%
!! GTGATGGATGGAGCATATAA+TGG - chr8.4:48506865-48506884 MS.gene32232:intron 40.0%
!! TATCTGTCCTTTTGGAAGGA+TGG - chr8.4:48507099-48507118 MS.gene32232:intron 40.0%
!!! TTCTGCCAGGTTGTTTTAGA+TGG - chr8.4:48505902-48505921 MS.gene32232:CDS 40.0%
AAAGGGCTCAAATTGTCCAG+CGG + chr8.4:48506980-48506999 None:intergenic 45.0%
AAATCCCACCATCTACTACC+AGG + chr8.4:48503181-48503200 None:intergenic 45.0%
AAGTATACCAGCGGAACTGA+AGG - chr8.4:48504403-48504422 MS.gene32232:intron 45.0%
AATGTTCCAACCGTCCAGTA+TGG + chr8.4:48503082-48503101 None:intergenic 45.0%
ACCTCGAGGATTCGAACTTA+AGG + chr8.4:48503033-48503052 None:intergenic 45.0%
ACCTGTATGGCCTTCATGTT+AGG + chr8.4:48502889-48502908 None:intergenic 45.0%
ACGGTGGAAGCAATTAGGAT+TGG + chr8.4:48502745-48502764 None:intergenic 45.0%
ACTGAACGGTGGAAGCAATT+AGG + chr8.4:48502750-48502769 None:intergenic 45.0%
AGAAGACACGTAAGGAACCA+TGG + chr8.4:48502779-48502798 None:intergenic 45.0%
AGAGCAACTTCACCAGTTCT+AGG + chr8.4:48502844-48502863 None:intergenic 45.0%
ATACAGAATCGCATTCGCAG+CGG + chr8.4:48502803-48502822 None:intergenic 45.0%
ATACTGGACGGTTGGAACAT+TGG - chr8.4:48503081-48503100 MS.gene32232:CDS 45.0%
CAACGAAAAGACCACACCAA+AGG + chr8.4:48504225-48504244 None:intergenic 45.0%
CAAGCTATTCTCTCGGAAAC+CGG - chr8.4:48506910-48506929 MS.gene32232:intron 45.0%
CAGTTCTCCATCCTTCCAAA+AGG + chr8.4:48507109-48507128 None:intergenic 45.0%
CCTGTATGGCCTTCATGTTA+GGG + chr8.4:48502888-48502907 None:intergenic 45.0%
CGCAACAGAAAAGATAGACC+AGG + chr8.4:48505145-48505164 None:intergenic 45.0%
CGTTCCGCAAAGCTTATTGA+AGG - chr8.4:48507650-48507669 MS.gene32232:CDS 45.0%
GAACTGGTGAAGTTGCTCTT+AGG - chr8.4:48502845-48502864 MS.gene32232:intron 45.0%
GAATGCGATTCTGTATTCGC+CGG - chr8.4:48502807-48502826 MS.gene32232:intron 45.0%
GACACAAAGGTTCCTAGAAC+TGG - chr8.4:48502829-48502848 MS.gene32232:CDS 45.0%
GAGAAAAACTGCCACCATTC+AGG - chr8.4:48505487-48505506 MS.gene32232:intron 45.0%
GAGAATATCTCTCCCTATGG+TGG + chr8.4:48507603-48507622 None:intergenic 45.0%
GATCTTGATATTGCGGCAAC+AGG - chr8.4:48505117-48505136 MS.gene32232:CDS 45.0%
GGAGGGATATCATTTGAGGA+AGG - chr8.4:48507455-48507474 MS.gene32232:CDS 45.0%
GGCAATACACGGAATATCCA+CGG - chr8.4:48505167-48505186 MS.gene32232:intron 45.0%
GTTCCATAAGGTTTCCTCTG+TGG + chr8.4:48503672-48503691 None:intergenic 45.0%
TCCTTAAGTTCGAATCCTCG+AGG - chr8.4:48503029-48503048 MS.gene32232:intron 45.0%
TCGAACTTAAGGACCTTGTG+AGG + chr8.4:48503022-48503041 None:intergenic 45.0%
TGACGCGTCGTATTCATACA+AGG - chr8.4:48504312-48504331 MS.gene32232:intron 45.0%
TTAGACCTCCTGGTAGTAGA+TGG - chr8.4:48503170-48503189 MS.gene32232:intron 45.0%
TTCCCCTCCATTGTTCCATA+AGG + chr8.4:48503684-48503703 None:intergenic 45.0%
TTCGAGAAGGTGACTTTGTG+TGG + chr8.4:48502627-48502646 None:intergenic 45.0%
TTCTCCCCGAGATAAAAACC+GGG - chr8.4:48507618-48507637 MS.gene32232:CDS 45.0%
TTTCTCTCTTCTCCACCAAC+TGG + chr8.4:48505473-48505492 None:intergenic 45.0%
! ACCGGACTAGATAAGACAAG+TGG - chr8.4:48506928-48506947 MS.gene32232:intron 45.0%
! ACTTTGTGTGGCGGAAGAAA+GGG + chr8.4:48502615-48502634 None:intergenic 45.0%
! CATCGTCACATTGGCCTAAT+TGG + chr8.4:48502669-48502688 None:intergenic 45.0%
! CGTCAGTTGGTATAACTCTG+AGG - chr8.4:48502692-48502711 MS.gene32232:intron 45.0%
! GATATGAGCATTTTGCAGGG+GGG - chr8.4:48504879-48504898 MS.gene32232:intron 45.0%
! GGTCTATCTTTTCTGTTGCG+GGG - chr8.4:48505145-48505164 MS.gene32232:CDS 45.0%
! GTCTATCTTTTCTGTTGCGG+GGG - chr8.4:48505146-48505165 MS.gene32232:CDS 45.0%
! TAAGGCATTTAGCGGGGAAT+AGG + chr8.4:48507257-48507276 None:intergenic 45.0%
! TATCCCCGGTTTTTATCTCG+GGG + chr8.4:48507625-48507644 None:intergenic 45.0%
! TCTTTTCCTCTGTTGTAGGC+CGG - chr8.4:48507428-48507447 MS.gene32232:CDS 45.0%
! TTTTGTAGGCTTTCAGGGAG+AGG - chr8.4:48505402-48505421 MS.gene32232:intron 45.0%
!! ATGGCTCTAATTAGACCTCC+TGG - chr8.4:48503160-48503179 MS.gene32232:CDS 45.0%
!! GGAAGTATGGTTTTCAGCTG+TGG - chr8.4:48506543-48506562 MS.gene32232:intron 45.0%
!! GTTCTAGGAACCTTTGTGTC+CGG + chr8.4:48502829-48502848 None:intergenic 45.0%
!! TGGTAGTAGATGGTGGGATT+TGG - chr8.4:48503180-48503199 MS.gene32232:intron 45.0%
!!! TTCTTTTGAAACCCGGTAGC+CGG + chr8.4:48503230-48503249 None:intergenic 45.0%
AAGGGCTCAAATTGTCCAGC+GGG + chr8.4:48506979-48506998 None:intergenic 50.0%
ACCAGCGGAACTGAAGGAAA+AGG - chr8.4:48504409-48504428 MS.gene32232:intron 50.0%
ACCTCCTGGTAGTAGATGGT+GGG - chr8.4:48503174-48503193 MS.gene32232:intron 50.0%
ATCTGCTGAGGATTCCACAG+AGG - chr8.4:48503655-48503674 MS.gene32232:intron 50.0%
CAACTTCCTTCGGCAACACA+AGG + chr8.4:48507685-48507704 None:intergenic 50.0%
CACCGTTCAGTTCAGTTCCA+TGG - chr8.4:48502759-48502778 MS.gene32232:intron 50.0%
CATGGAACTGAACTGAACGG+TGG + chr8.4:48502761-48502780 None:intergenic 50.0%
CCAGCGGAACTGAAGGAAAA+GGG - chr8.4:48504410-48504429 MS.gene32232:intron 50.0%
CCAGCGGGCATTATTTCCAA+GGG + chr8.4:48506964-48506983 None:intergenic 50.0%
CCCTAACATGAAGGCCATAC+AGG - chr8.4:48502885-48502904 MS.gene32232:intron 50.0%
CCTTCATGTTAGGGCTTGCA+GGG + chr8.4:48502879-48502898 None:intergenic 50.0%
CTGACGTGTCATCGTCACAT+TGG + chr8.4:48502678-48502697 None:intergenic 50.0%
GAGAAGGTGACTTTGTGTGG+CGG + chr8.4:48502624-48502643 None:intergenic 50.0%
GCGAGTGATCGGAATGTTGA+AGG + chr8.4:48502587-48502606 None:intergenic 50.0%
GGCTCATAACGAAGCTTCTG+AGG - chr8.4:48507167-48507186 MS.gene32232:intron 50.0%
GGGGAGAATATCTCTCCCTA+TGG + chr8.4:48507606-48507625 None:intergenic 50.0%
TACAGAATCGCATTCGCAGC+GGG + chr8.4:48502802-48502821 None:intergenic 50.0%
TCCAGCGGGCATTATTTCCA+AGG + chr8.4:48506965-48506984 None:intergenic 50.0%
TCTCCCCGAGATAAAAACCG+GGG - chr8.4:48507619-48507638 MS.gene32232:CDS 50.0%
TCTGTATTCGCCGGACACAA+AGG - chr8.4:48502816-48502835 MS.gene32232:CDS 50.0%
TGAAGGAAAAGGGCCCTCTT+TGG - chr8.4:48504420-48504439 MS.gene32232:intron 50.0%
TGCGGAACGAATGATATCCC+CGG + chr8.4:48507639-48507658 None:intergenic 50.0%
TGTGACGATGACACGTCAGT+TGG - chr8.4:48502679-48502698 MS.gene32232:CDS 50.0%
TTTGAAGGAGTCACTGACCG+TGG + chr8.4:48505187-48505206 None:intergenic 50.0%
! GACTTTGTGTGGCGGAAGAA+AGG + chr8.4:48502616-48502635 None:intergenic 50.0%
! GGTTTTCAGCTGTGGAAGAC+TGG - chr8.4:48506551-48506570 MS.gene32232:intron 50.0%
!! TCCCCGGATTAGTCAGTCTT+GGG - chr8.4:48503204-48503223 MS.gene32232:intron 50.0%
!! TGCTCAGGAGCACTGTAAGA+CGG + chr8.4:48507718-48507737 None:intergenic 50.0%
!! TTCCCCGGATTAGTCAGTCT+TGG - chr8.4:48503203-48503222 MS.gene32232:intron 50.0%
ATATTGCGGCAACAGGCACC+TGG - chr8.4:48505124-48505143 MS.gene32232:CDS 55.0%
CCCTGCAAGCCCTAACATGA+AGG - chr8.4:48502876-48502895 MS.gene32232:intron 55.0%
CCCTTGGAAATAATGCCCGC+TGG - chr8.4:48506961-48506980 MS.gene32232:intron 55.0%
CGGCCCAAGACTGACTAATC+CGG + chr8.4:48503210-48503229 None:intergenic 55.0%
CTTCCTTCGGCAACACAAGG+CGG + chr8.4:48507682-48507701 None:intergenic 55.0%
GACCTCCTGGTAGTAGATGG+TGG - chr8.4:48503173-48503192 MS.gene32232:intron 55.0%
GCCCAAGACTGACTAATCCG+GGG + chr8.4:48503208-48503227 None:intergenic 55.0%
GCCTTCATGTTAGGGCTTGC+AGG + chr8.4:48502880-48502899 None:intergenic 55.0%
GGCATTTAGCGGGGAATAGG+TGG + chr8.4:48507254-48507273 None:intergenic 55.0%
GGCCCAAGACTGACTAATCC+GGG + chr8.4:48503209-48503228 None:intergenic 55.0%
GTCTTACAGTGCTCCTGAGC+AGG - chr8.4:48507717-48507736 MS.gene32232:CDS 55.0%
GTGGTGAAGGCTTGAGACCT+AGG - chr8.4:48502988-48503007 MS.gene32232:intron 55.0%
TCCCACCATCTACTACCAGG+AGG + chr8.4:48503178-48503197 None:intergenic 55.0%
TCTGTTGCGGGGGCAATACA+CGG - chr8.4:48505156-48505175 MS.gene32232:intron 55.0%
TGGAGTCGGTCCATACTGGA+CGG - chr8.4:48503069-48503088 MS.gene32232:CDS 55.0%
TGTGTGGAGTCGGTCCATAC+TGG - chr8.4:48503065-48503084 MS.gene32232:CDS 55.0%
! AAAGGGTGGTGGCGAGTGAT+CGG + chr8.4:48502598-48502617 None:intergenic 55.0%
! CCCTTTTCCTTCAGTTCCGC+TGG + chr8.4:48504413-48504432 None:intergenic 55.0%
! CTAGGAGTGTGCTCCTCACA+AGG - chr8.4:48503006-48503025 MS.gene32232:intron 55.0%
! CTTGTGAGGAGCACACTCCT+AGG + chr8.4:48503008-48503027 None:intergenic 55.0%
! TGTTGTAGGCCGGCTTAGGA+GGG - chr8.4:48507438-48507457 MS.gene32232:CDS 55.0%
! TTGTGTGGCGGAAGAAAGGG+TGG + chr8.4:48502612-48502631 None:intergenic 55.0%
!! CGGATTAGTCAGTCTTGGGC+CGG - chr8.4:48503208-48503227 MS.gene32232:intron 55.0%
!! GATGGTGGGATTTGGTTCCC+CGG - chr8.4:48503188-48503207 MS.gene32232:intron 55.0%
AGACCGCCTTGTGTTGCCGA+AGG - chr8.4:48507676-48507695 MS.gene32232:CDS 60.0%
CCTAAGCCGGCCTACAACAG+AGG + chr8.4:48507437-48507456 None:intergenic 60.0%
GCAGCGGGAGAAGACACGTA+AGG + chr8.4:48502787-48502806 None:intergenic 60.0%
GTCGGTCCATACTGGACGGT+TGG - chr8.4:48503073-48503092 MS.gene32232:CDS 60.0%
TCGGCAACACAAGGCGGTCT+TGG + chr8.4:48507676-48507695 None:intergenic 60.0%
! CCTCTGTTGTAGGCCGGCTT+AGG - chr8.4:48507434-48507453 MS.gene32232:CDS 60.0%
! CTGTTGTAGGCCGGCTTAGG+AGG - chr8.4:48507437-48507456 MS.gene32232:CDS 60.0%
! TGTGGCGGAAGAAAGGGTGG+TGG + chr8.4:48502609-48502628 None:intergenic 60.0%
GTCAGTCTTGGGCCGGCTAC+CGG - chr8.4:48503215-48503234 MS.gene32232:intron 65.0%
TCAGTCTTGGGCCGGCTACC+GGG - chr8.4:48503216-48503235 MS.gene32232:intron 65.0%


Chromosome Type Strat End Strand Name
chr8.4 gene 48502562 48507742 48502562 ID=MS.gene32232
chr8.4 mRNA 48502562 48507742 48502562 ID=MS.gene32232.t1;Parent=MS.gene32232
chr8.4 exon 48507398 48507742 48507398 ID=MS.gene32232.t1.exon1;Parent=MS.gene32232.t1
chr8.4 CDS 48507398 48507742 48507398 ID=cds.MS.gene32232.t1;Parent=MS.gene32232.t1
chr8.4 exon 48506582 48506671 48506582 ID=MS.gene32232.t1.exon2;Parent=MS.gene32232.t1
chr8.4 CDS 48506582 48506671 48506582 ID=cds.MS.gene32232.t1;Parent=MS.gene32232.t1
chr8.4 exon 48505838 48505933 48505838 ID=MS.gene32232.t1.exon3;Parent=MS.gene32232.t1
chr8.4 CDS 48505838 48505933 48505838 ID=cds.MS.gene32232.t1;Parent=MS.gene32232.t1
chr8.4 exon 48505300 48505407 48505300 ID=MS.gene32232.t1.exon4;Parent=MS.gene32232.t1
chr8.4 CDS 48505300 48505407 48505300 ID=cds.MS.gene32232.t1;Parent=MS.gene32232.t1
chr8.4 exon 48505116 48505165 48505116 ID=MS.gene32232.t1.exon5;Parent=MS.gene32232.t1
chr8.4 CDS 48505116 48505165 48505116 ID=cds.MS.gene32232.t1;Parent=MS.gene32232.t1
chr8.4 exon 48504828 48504894 48504828 ID=MS.gene32232.t1.exon6;Parent=MS.gene32232.t1
chr8.4 CDS 48504828 48504894 48504828 ID=cds.MS.gene32232.t1;Parent=MS.gene32232.t1
chr8.4 exon 48504340 48504393 48504340 ID=MS.gene32232.t1.exon7;Parent=MS.gene32232.t1
chr8.4 CDS 48504340 48504393 48504340 ID=cds.MS.gene32232.t1;Parent=MS.gene32232.t1
chr8.4 exon 48503326 48503439 48503326 ID=MS.gene32232.t1.exon8;Parent=MS.gene32232.t1
chr8.4 CDS 48503326 48503439 48503326 ID=cds.MS.gene32232.t1;Parent=MS.gene32232.t1
chr8.4 exon 48503065 48503187 48503065 ID=MS.gene32232.t1.exon9;Parent=MS.gene32232.t1
chr8.4 CDS 48503065 48503187 48503065 ID=cds.MS.gene32232.t1;Parent=MS.gene32232.t1
chr8.4 exon 48502809 48502858 48502809 ID=MS.gene32232.t1.exon10;Parent=MS.gene32232.t1
chr8.4 CDS 48502809 48502858 48502809 ID=cds.MS.gene32232.t1;Parent=MS.gene32232.t1
chr8.4 exon 48502562 48502709 48502562 ID=MS.gene32232.t1.exon11;Parent=MS.gene32232.t1
chr8.4 CDS 48502562 48502709 48502562 ID=cds.MS.gene32232.t1;Parent=MS.gene32232.t1
Gene Sequence

>MS.gene32232

ATGGCGTATCCTCTCTCTTCTTCCTTCAACATTCCGATCACTCGCCACCACCCTTTCTTCCGCCACACAAAGTCACCTTCTCGAATATTCTGCTTCACAAAGAGCCAATTAGGCCAATGTGACGATGACACGTCAGTTGGTATAACTCTGAGGATAATGAAGCAATTGAAGAGTGTGATTCCAATCCTAATTGCTTCCACCGTTCAGTTCAGTTCCATGGTTCCTTACGTGTCTTCTCCCGCTGCGAATGCGATTCTGTATTCGCCGGACACAAAGGTTCCTAGAACTGGTGAAGTTGCTCTTAGGAGAGCTATCCCTGCAAGCCCTAACATGAAGGCCATACAGGTTGTGTTTTGTTCTATAATGCATATCTTATTTTGATTTATTTGTTATGTACAAGGCAATTAAATATTTTAATAAACTTATGTGGTGAAGGCTTGAGACCTAGGAGTGTGCTCCTCACAAGGTCCTTAAGTTCGAATCCTCGAGGTTTCAATAATTCTTGTGTGGAGTCGGTCCATACTGGACGGTTGGAACATTGGTGTGAAGTTGGAAGGAAATTGAAAGGTTGGAAGATTAAAAACAAGTCACGAGACATATGGCTCTAATTAGACCTCCTGGTAGTAGATGGTGGGATTTGGTTCCCCGGATTAGTCAGTCTTGGGCCGGCTACCGGGTTTCAAAAGAAATGTAACCTATTTAGTTACTCCCTCTAATCTAAAAATTTTCAAGATCAAAGAAATGCATTGAAATAGTTAATTGTAAATTGGTAGTACAATTTTGAATTTATTCTAAAAATAGCCTTTGGTGTCTTTTCATATATTTCTTGGATAAGAAATGAGTGAGAATTCTTCTCACAATAAACAACGGTATACAAGGAATTGAATATTATAATATGTTGAAAATGATCAAATGGAGTAGTTTGTTATATATATATAAGAACCAAAATTTGCAATATTTTGATTCACATGAAGAGGACTGATAGGAGTAGTTAGTTTCTAACTGGTCTATACATAACTAACTATTTTTTTATAGAAACTAATAAGTTGTGTTACAATGATACTAATTCAGGAGACTCTTGAAGATATTTCGTATCTGCTGAGGATTCCACAGAGGAAACCTTATGGAACAATGGAGGGGAACGTAAAGAAAGTTTTGAAGGTAATCATAATTTTTTTCTTCTCGTGTATTTATAATAGTTTAATATCTGAAATCCCATGGTTAAGTATTTTAGATGCATTATAAGAAATACTGGAGGGAAATATAGAAGATGCAAACCATAGGATTCATGTGCAATATGGAAAAAAAATAACTCTCGAGTTTACAGGTAAATTTTAAAGCACTGTTGTAAGACCTACTATATGAATAAAGTGGTAAAAAGAAAGTAAGATCCATGTTACAGAGATGCTCAGATGCAAACTTTATGATGGGTCATGGAATCCACAAGACAAAATAGGAATGAGAATGAAAGTATTAGAAAGAAAGTTGGATAATACTTGTTGTATAGTAGATGAAAAATCACTGATTATTAGGTGTTATTTCCTTTCTAAGATTTTACAGACCCTCTGTTCAATTGAATTAATGAAACAGTTTTCAATTATTTAAATTTTGTACATGTGCAAACTTTGTGATTTTTTGAGCTTCCATAACATCTTTTAAGCCTTTGGTGTGGTCTTTTCGTTGATAGAAAGATATACGATTGCAACTAAAATACTTTAAACTTCACAATTTACATGTAAAACTTAAGTCTTGACGCGTCGTATTCATACAAGGACTTCAATATTTTGATCAGTTTCTTCCTTATTTTAGATAGCGGTAGATGAAAAGGATTCTATATTGGCAAGTATACCAGCGGAACTGAAGGAAAAGGGCCCTCTTTGGTGCATTCACTTTATAGATGGGAAGGTATTTTAGAAAAAATGAACCTCGATATTTGATTAATTGTATATCAAGTGCTGACACCTTCTTTCTAACAGAAAAATATTTCACGTTTCAACATAATTGGATATGTTTATGATGATTTCGGTCAATTTAACTCAGGGCTATACATGCATTGATAGTTCTCGTACAATATAGCGATATTTTTCTATTGTTTACTTTTCCTATATATAGCCGATATACCTTGTGCTTATATCACACAGGTTGCTGATTCTTGAAAAAGGATTCAGATGAAGAAACTTGAGTGTGAAACTTAGTTATTTTCACTTTATTTCAGATCATTGTGTTACTTTTTTTTGTTGTAGGATGAAATCTTTGACAATGTTTGTTATATAATTCTCACATGGTAGTTATGGTCCATTATAGAAGCTATCAGAATGATATGAGCATTTTGCAGGGGGGTTTGCAAGTTCTCCTTCAATCCATAAAGGAACAGGATGCAGATAAAGTATCTGTGAACCTTCAATCTACACTGGATATTGTAGCAGAACTAGAGACATTACAGGTGATGGAAACCAAATAATATGATGCTATCTTGAAATCAAGAGTCAATTTTGTTTTCCAATTAAAATGACTGAATCAATGTAACACTTATATTATGGACATGTACTTAATCTGATCTTGATATTGCGGCAACAGGCACCTGGTCTATCTTTTCTGTTGCGGGGGCAATACACGGAATATCCACGGTCAGTGACTCCTTCAAAATGACATGTCAGTTTACTACATTGATGTAGTTTAAACATCCCTCTAATGTATATTTTGACGTATTTCACATGTATCCATCATTTGACATGAGACTAGTATAAAAAAATCATTGTATCTTTAATCATTCTTAGTGCAATTCCTTGGACAAATTCAATAGTCAGAAGAAGGGAGAAAAATCAACATCTTCATAATTTTTTTGTAGGCTTTCAGGGAGAGGAACTGTTGAGTTTATCATTGAGAAGGAGACGGTTCAACATTTTCTCCAGTTGGTGGAGAAGAGAGAAAAACTGCCACCATTCAGGTAAAATTCAATCCATAACTTGTCCTTATGATTATCCATTGGTTGTTGATTTGATCGACCTACTCTTAAACAATCCATAAACATTAGAAAAGGTCCATTTTAAGGAACACTCAAAATAAGTATTAACAATTTTCATAAATGCATTGACGGTTGTAATGACTTGAAAATGACGAACACTATATTTATTTTGAGATAAGCTTGGAATAAATTAATTAATGTTACATTGAAATAGTAAAACGCATTTTGAACAAAATTTCTTTGCTAAAACTTATTTTGGAATGGATGGAGTATAACATAAATACATAACTGCAAATAGTAGTTGGCTGAATACTGAATTATGCATTGAAAGTTTACTGTTGGTAGACGGTATATTGAAACTAACTGACAGTTAATTTCTGCCAGGTTGTTTTAGATGGATATTCAGCTCCTTTAACTGCAGGGAATTTTGCAAAACTGGTAAGGTAGTGCAACTGTGCTTCAGCTTTGTGAATTCAGTTTGTCTATTATTTGCCAATATCCAGTGTATATCGCTCTTCATTTTCATCGCTTATCATGGTTTATCCATATTCGGTCTGATTTACCAGTTCTCTGAGTGAACTAAATCAGTGATGTTCATTTTTTTACTTGAATGGTTTATTATCTATTTCTAATGCCTGAATCCATTACTGACTTCCTATTAATCATGAACTTTTTATGTATCATCGCAAACATTTCAGTCAACTAGGTTTATTTTTTTCAATTAAAAATTACTTGTTTTGCTTTTGGGATGATAGTTTGAATAGAGAATAAAGAATGCTTCCACATTCTTAAACTTATGTTCAGGATCTTGTGTATGCAGCGTGATAAATTTTTGTATAAGGAGAATATAGTAACTGGAATACCTATATTTTCTACTTGAAATTTAATGTAAAGTTGATTTTAATGATTAACGAGGAAGAGTCAACTTTTAAACGAAACCTTGGAAACAACTATGGCAATATACAACTTTGAGGAATGGTTTAATGTGAAACTAATATAAGGGATGAGAGCAATAAGGAAGTATGGTTTTCAGCTGTGGAAGACTGGAAATTATGTGTTGCAAATTGGAATATTTTGTTTCTTCGTCTAGAATATCTATTTTTGAATGTGCATATATTGCTGTATAATGTGGTATTTTTCATGTTTCTAGATTTGTTTTAAGCATCTAGATAATTTGATTTTACCATCATCTACTGAAACAACGCTGTTAAATTTGGGTTAGGCTGAACCCTACAAAATCAGTTTGTAATGCGAGAGATGCTTTCCACTTACAAATACATTTTTAAGGCATATCTATCTAATGTGGTCTCTCAACACACTCAGTCACATATCCTTTAGGTGATGGATGGAGCATATAATGGCATAAAACTCAACTGTTCCAATCAAGCTATTCTCTCGGAAACCGGACTAGATAAGACAAGTGGTTACAATGTTCCCTTGGAAATAATGCCCGCTGGACAATTTGAGCCCTTTATAAAACAACATTAGTGTACAGGTATGTTTTCGTTTCAGTTTATCACATTTTTTGCAGCACACTTGACAGAGTAATAATCATGTTCTCATTTATTTTCTTATCTGTCCTTTTGGAAGGATGGAGAACTGCCAGTTCTGCCTCTATCTGTTTATGGAGCAGTTGCTATGGCTCATAACGAAGCTTCTGAGGAGTATTCATCACCTTATCAATTTTTCTTCTATCTCTATGATAAAAGAAATGTAAGGGCAAGCCACCTATTCCCCGCTAAATGCCTTATATTTGTTTTCTTAAAATTTTGTTATGCAAAATAAGAGTGAAAGGTGGACGCAGAATTTGAATGAGTGATGTTTCATGTTTTTAAAACTAGAATGGGTCCTTTGTTTTTTCTTTTCAATTGTTGAAGCCTAATTAGTAATCTTTTTTTTATTCTTTTCCTCTGTTGTAGGCCGGCTTAGGAGGGATATCATTTGAGGAAGGGCAATTTTCAGTTTTTGGGTAAGTTATGTTACTATTCATATATCTTCTGAACCATTTTGAGGTTTAACTATTTTCTCTTTTCTCTTTTTTGTTTTTATTTTGGGGTGCTATGTGCAGATATACCACCATAGGGAGAGATATTCTCCCCGAGATAAAAACCGGGGATATCATTCGTTCCGCAAAGCTTATTGAAGGCCAAGACCGCCTTGTGTTGCCGAAGGAAGTTGAGTACGTCTTCCGTCTTACAGTGCTCCTGAGCAGGTAA

Protein sequence

>MS.gene32232.t1

MAYPLSSSFNIPITRHHPFFRHTKSPSRIFCFTKSQLGQCDDDTSVGITLRIMKQLKSVIPILIASTVQFSSMVPYVSSPAANAILYSPDTKVPRTGEVALRRAIPASPNMKAIQETLEDISYLLRIPQRKPYGTMEGNVKKVLKIAVDEKDSILASIPAELKEKGPLWCIHFIDGKGGLQVLLQSIKEQDADKVSVNLQSTLDIVAELETLQAPGLSFLLRGQYTEYPRLSGRGTVEFIIEKETVQHFLQLVVLDGYSAPLTAGNFAKLVMDGAYNGIKLNCSNQAILSETGLDKTSGYNVPLEIMPDGELPVLPLSVYGAVAMAHNEASEEYSSPYQFFFYLYDKRNAGLGGISFEEGQFSVFGYTTIGRDILPEIKTGDIIRSAKLIEGQDRLVLPKEVEYVFRLTVLLSR