Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92220.t1 | XP_013447451.1 | 93.9 | 181 | 11 | 0 | 1 | 181 | 1 | 181 | 1.90E-94 | 355.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92220.t1 | P07689 | 86.0 | 179 | 25 | 0 | 3 | 181 | 2 | 180 | 1.9e-87 | 323.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92220.t1 | A0A072U6Q1 | 93.9 | 181 | 11 | 0 | 1 | 181 | 1 | 181 | 1.4e-94 | 355.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene92220 | 0.805964 | 1.04E-49 | -1.69E-46 |
| MS.gene049171 | MS.gene92220 | 0.918015 | 2.62E-86 | -1.69E-46 |
| MS.gene049173 | MS.gene92220 | 0.911493 | 5.71E-83 | -1.69E-46 |
| MS.gene049217 | MS.gene92220 | 0.89371 | 4.88E-75 | -1.69E-46 |
| MS.gene049222 | MS.gene92220 | 0.888448 | 5.85E-73 | -1.69E-46 |
| MS.gene049232 | MS.gene92220 | 0.866952 | 1.96E-65 | -1.69E-46 |
| MS.gene049285 | MS.gene92220 | 0.947136 | 1.21E-105 | -1.69E-46 |
| MS.gene049320 | MS.gene92220 | 0.936642 | 1.25E-97 | -1.69E-46 |
| MS.gene04939 | MS.gene92220 | 0.829204 | 5.87E-55 | -1.69E-46 |
| MS.gene049609 | MS.gene92220 | 0.8741 | 8.79E-68 | -1.69E-46 |
| MS.gene049627 | MS.gene92220 | 0.806475 | 8.08E-50 | -1.69E-46 |
| MS.gene049633 | MS.gene92220 | 0.862332 | 5.46E-64 | -1.69E-46 |
| MS.gene049805 | MS.gene92220 | 0.850398 | 1.74E-60 | -1.69E-46 |
| MS.gene05010 | MS.gene92220 | 0.891397 | 4.12E-74 | -1.69E-46 |
| MS.gene050163 | MS.gene92220 | 0.916114 | 2.63E-85 | -1.69E-46 |
| MS.gene050165 | MS.gene92220 | 0.915241 | 7.44E-85 | -1.69E-46 |
| MS.gene050170 | MS.gene92220 | 0.819656 | 1.04E-52 | -1.69E-46 |
| MS.gene050216 | MS.gene92220 | 0.837875 | 4.01E-57 | -1.69E-46 |
| MS.gene050323 | MS.gene92220 | 0.866328 | 3.09E-65 | -1.69E-46 |
| MS.gene050333 | MS.gene92220 | 0.9247 | 4.96E-90 | -1.69E-46 |
| MS.gene050444 | MS.gene92220 | 0.853847 | 1.82E-61 | -1.69E-46 |
| MS.gene050496 | MS.gene92220 | 0.851626 | 7.85E-61 | -1.69E-46 |
| MS.gene050504 | MS.gene92220 | 0.911797 | 4.05E-83 | -1.69E-46 |
| MS.gene050518 | MS.gene92220 | 0.906738 | 1.08E-80 | -1.69E-46 |
| MS.gene050577 | MS.gene92220 | 0.856743 | 2.62E-62 | -1.69E-46 |
| MS.gene050593 | MS.gene92220 | 0.823386 | 1.42E-53 | -1.69E-46 |
| MS.gene050612 | MS.gene92220 | 0.920725 | 8.90E-88 | -1.69E-46 |
| MS.gene050662 | MS.gene92220 | 0.841939 | 3.51E-58 | -1.69E-46 |
| MS.gene050675 | MS.gene92220 | 0.894285 | 2.85E-75 | -1.69E-46 |
| MS.gene050686 | MS.gene92220 | 0.833478 | 5.21E-56 | -1.69E-46 |
| MS.gene050699 | MS.gene92220 | 0.916353 | 1.97E-85 | -1.69E-46 |
| MS.gene050747 | MS.gene92220 | 0.842664 | 2.25E-58 | -1.69E-46 |
| MS.gene050767 | MS.gene92220 | 0.836293 | 1.02E-56 | -1.69E-46 |
| MS.gene050770 | MS.gene92220 | 0.839621 | 1.42E-57 | -1.69E-46 |
| MS.gene050772 | MS.gene92220 | 0.925622 | 1.43E-90 | -1.69E-46 |
| MS.gene05080 | MS.gene92220 | 0.855489 | 6.10E-62 | -1.69E-46 |
| MS.gene050868 | MS.gene92220 | 0.846468 | 2.13E-59 | -1.69E-46 |
| MS.gene050871 | MS.gene92220 | 0.843118 | 1.71E-58 | -1.69E-46 |
| MS.gene050876 | MS.gene92220 | 0.838714 | 2.44E-57 | -1.69E-46 |
| MS.gene050904 | MS.gene92220 | 0.813327 | 2.71E-51 | -1.69E-46 |
| MS.gene050950 | MS.gene92220 | 0.834106 | 3.63E-56 | -1.69E-46 |
| MS.gene050986 | MS.gene92220 | 0.901188 | 3.45E-78 | -1.69E-46 |
| MS.gene05100 | MS.gene92220 | 0.894572 | 2.17E-75 | -1.69E-46 |
| MS.gene051228 | MS.gene92220 | 0.8762 | 1.69E-68 | -1.69E-46 |
| MS.gene051268 | MS.gene92220 | 0.80327 | 3.78E-49 | -1.69E-46 |
| MS.gene051317 | MS.gene92220 | 0.842719 | 2.18E-58 | -1.69E-46 |
| MS.gene051364 | MS.gene92220 | -0.811221 | 7.80E-51 | -1.69E-46 |
| MS.gene051366 | MS.gene92220 | -0.826115 | 3.24E-54 | -1.69E-46 |
| MS.gene051434 | MS.gene92220 | 0.814614 | 1.41E-51 | -1.69E-46 |
| MS.gene051551 | MS.gene92220 | 0.884487 | 1.84E-71 | -1.69E-46 |
| MS.gene051651 | MS.gene92220 | -0.800053 | 1.73E-48 | -1.69E-46 |
| MS.gene051666 | MS.gene92220 | 0.843569 | 1.29E-58 | -1.69E-46 |
| MS.gene051692 | MS.gene92220 | 0.803494 | 3.39E-49 | -1.69E-46 |
| MS.gene051694 | MS.gene92220 | 0.813967 | 1.96E-51 | -1.69E-46 |
| MS.gene051810 | MS.gene92220 | 0.910539 | 1.67E-82 | -1.69E-46 |
| MS.gene051858 | MS.gene92220 | 0.863517 | 2.35E-64 | -1.69E-46 |
| MS.gene051874 | MS.gene92220 | 0.812215 | 4.74E-51 | -1.69E-46 |
| MS.gene051949 | MS.gene92220 | 0.892157 | 2.06E-74 | -1.69E-46 |
| MS.gene052164 | MS.gene92220 | 0.851661 | 7.68E-61 | -1.69E-46 |
| MS.gene052271 | MS.gene92220 | 0.911644 | 4.82E-83 | -1.69E-46 |
| MS.gene052379 | MS.gene92220 | 0.846494 | 2.10E-59 | -1.69E-46 |
| MS.gene052482 | MS.gene92220 | 0.835471 | 1.65E-56 | -1.69E-46 |
| MS.gene052486 | MS.gene92220 | 0.842759 | 2.13E-58 | -1.69E-46 |
| MS.gene052503 | MS.gene92220 | 0.848407 | 6.25E-60 | -1.69E-46 |
| MS.gene052504 | MS.gene92220 | 0.815664 | 8.23E-52 | -1.69E-46 |
| MS.gene052506 | MS.gene92220 | 0.857599 | 1.46E-62 | -1.69E-46 |
| MS.gene052615 | MS.gene92220 | 0.856182 | 3.82E-62 | -1.69E-46 |
| MS.gene052820 | MS.gene92220 | 0.802059 | 6.71E-49 | -1.69E-46 |
| MS.gene052822 | MS.gene92220 | 0.880885 | 3.79E-70 | -1.69E-46 |
| MS.gene052823 | MS.gene92220 | 0.835582 | 1.54E-56 | -1.69E-46 |
| MS.gene052825 | MS.gene92220 | 0.831526 | 1.59E-55 | -1.69E-46 |
| MS.gene052870 | MS.gene92220 | 0.829592 | 4.72E-55 | -1.69E-46 |
| MS.gene052872 | MS.gene92220 | 0.844424 | 7.62E-59 | -1.69E-46 |
| MS.gene052916 | MS.gene92220 | 0.895467 | 9.32E-76 | -1.69E-46 |
| MS.gene052966 | MS.gene92220 | 0.845689 | 3.47E-59 | -1.69E-46 |
| MS.gene053009 | MS.gene92220 | 0.848118 | 7.51E-60 | -1.69E-46 |
| MS.gene053018 | MS.gene92220 | 0.807109 | 5.93E-50 | -1.69E-46 |
| MS.gene053104 | MS.gene92220 | 0.842799 | 2.07E-58 | -1.69E-46 |
| MS.gene053203 | MS.gene92220 | 0.846414 | 2.21E-59 | -1.69E-46 |
| MS.gene053207 | MS.gene92220 | 0.855894 | 4.64E-62 | -1.69E-46 |
| MS.gene053213 | MS.gene92220 | 0.9126 | 1.62E-83 | -1.69E-46 |
| MS.gene053286 | MS.gene92220 | 0.909146 | 7.86E-82 | -1.69E-46 |
| MS.gene053322 | MS.gene92220 | 0.852482 | 4.48E-61 | -1.69E-46 |
| MS.gene053420 | MS.gene92220 | -0.805177 | 1.51E-49 | -1.69E-46 |
| MS.gene053436 | MS.gene92220 | 0.830308 | 3.16E-55 | -1.69E-46 |
| MS.gene053479 | MS.gene92220 | 0.807945 | 3.94E-50 | -1.69E-46 |
| MS.gene053480 | MS.gene92220 | 0.813351 | 2.68E-51 | -1.69E-46 |
| MS.gene053561 | MS.gene92220 | -0.822 | 2.99E-53 | -1.69E-46 |
| MS.gene053574 | MS.gene92220 | 0.871762 | 5.34E-67 | -1.69E-46 |
| MS.gene053632 | MS.gene92220 | 0.896721 | 2.81E-76 | -1.69E-46 |
| MS.gene053824 | MS.gene92220 | 0.865347 | 6.31E-65 | -1.69E-46 |
| MS.gene053916 | MS.gene92220 | 0.890709 | 7.71E-74 | -1.69E-46 |
| MS.gene054408 | MS.gene92220 | 0.815168 | 1.06E-51 | -1.69E-46 |
| MS.gene054595 | MS.gene92220 | 0.841981 | 3.42E-58 | -1.69E-46 |
| MS.gene054600 | MS.gene92220 | 0.892842 | 1.09E-74 | -1.69E-46 |
| MS.gene054642 | MS.gene92220 | 0.946578 | 3.53E-105 | -1.69E-46 |
| MS.gene05470 | MS.gene92220 | 0.835774 | 1.38E-56 | -1.69E-46 |
| MS.gene054954 | MS.gene92220 | 0.934456 | 3.93E-96 | -1.69E-46 |
| MS.gene054959 | MS.gene92220 | -0.808838 | 2.54E-50 | -1.69E-46 |
| MS.gene05505 | MS.gene92220 | 0.845809 | 3.22E-59 | -1.69E-46 |
| MS.gene055154 | MS.gene92220 | -0.824728 | 6.90E-54 | -1.69E-46 |
| MS.gene055206 | MS.gene92220 | 0.856543 | 3.00E-62 | -1.69E-46 |
| MS.gene055212 | MS.gene92220 | 0.865488 | 5.69E-65 | -1.69E-46 |
| MS.gene055224 | MS.gene92220 | 0.825287 | 5.09E-54 | -1.69E-46 |
| MS.gene055289 | MS.gene92220 | 0.813679 | 2.27E-51 | -1.69E-46 |
| MS.gene055362 | MS.gene92220 | 0.938655 | 4.70E-99 | -1.69E-46 |
| MS.gene055397 | MS.gene92220 | 0.850011 | 2.24E-60 | -1.69E-46 |
| MS.gene055499 | MS.gene92220 | 0.837612 | 4.69E-57 | -1.69E-46 |
| MS.gene055502 | MS.gene92220 | 0.908596 | 1.44E-81 | -1.69E-46 |
| MS.gene055577 | MS.gene92220 | 0.877222 | 7.47E-69 | -1.69E-46 |
| MS.gene055634 | MS.gene92220 | 0.86846 | 6.42E-66 | -1.69E-46 |
| MS.gene055636 | MS.gene92220 | 0.873558 | 1.34E-67 | -1.69E-46 |
| MS.gene055638 | MS.gene92220 | 0.892815 | 1.12E-74 | -1.69E-46 |
| MS.gene055647 | MS.gene92220 | 0.853763 | 1.93E-61 | -1.69E-46 |
| MS.gene055722 | MS.gene92220 | 0.902734 | 7.16E-79 | -1.69E-46 |
| MS.gene055748 | MS.gene92220 | 0.86108 | 1.32E-63 | -1.69E-46 |
| MS.gene055750 | MS.gene92220 | 0.857795 | 1.28E-62 | -1.69E-46 |
| MS.gene055751 | MS.gene92220 | 0.870219 | 1.72E-66 | -1.69E-46 |
| MS.gene055776 | MS.gene92220 | 0.895209 | 1.19E-75 | -1.69E-46 |
| MS.gene055849 | MS.gene92220 | 0.854359 | 1.30E-61 | -1.69E-46 |
| MS.gene05589 | MS.gene92220 | 0.842156 | 3.07E-58 | -1.69E-46 |
| MS.gene05592 | MS.gene92220 | 0.872889 | 2.25E-67 | -1.69E-46 |
| MS.gene055941 | MS.gene92220 | 0.858653 | 7.11E-63 | -1.69E-46 |
| MS.gene055942 | MS.gene92220 | -0.830242 | 3.28E-55 | -1.69E-46 |
| MS.gene055956 | MS.gene92220 | -0.861348 | 1.09E-63 | -1.69E-46 |
| MS.gene056046 | MS.gene92220 | 0.82303 | 1.72E-53 | -1.69E-46 |
| MS.gene056083 | MS.gene92220 | 0.854138 | 1.50E-61 | -1.69E-46 |
| MS.gene056374 | MS.gene92220 | 0.896443 | 3.67E-76 | -1.69E-46 |
| MS.gene056409 | MS.gene92220 | 0.81354 | 2.43E-51 | -1.69E-46 |
| MS.gene056449 | MS.gene92220 | 0.81431 | 1.64E-51 | -1.69E-46 |
| MS.gene056487 | MS.gene92220 | 0.825023 | 5.87E-54 | -1.69E-46 |
| MS.gene056504 | MS.gene92220 | 0.893991 | 3.75E-75 | -1.69E-46 |
| MS.gene056510 | MS.gene92220 | 0.900601 | 6.22E-78 | -1.69E-46 |
| MS.gene056549 | MS.gene92220 | 0.83529 | 1.83E-56 | -1.69E-46 |
| MS.gene056610 | MS.gene92220 | 0.808352 | 3.23E-50 | -1.69E-46 |
| MS.gene056657 | MS.gene92220 | 0.943917 | 5.05E-103 | -1.69E-46 |
| MS.gene056692 | MS.gene92220 | 0.860411 | 2.10E-63 | -1.69E-46 |
| MS.gene056761 | MS.gene92220 | -0.822986 | 1.77E-53 | -1.69E-46 |
| MS.gene056898 | MS.gene92220 | 0.83577 | 1.38E-56 | -1.69E-46 |
| MS.gene056946 | MS.gene92220 | 0.815579 | 8.60E-52 | -1.69E-46 |
| MS.gene057076 | MS.gene92220 | 0.855576 | 5.75E-62 | -1.69E-46 |
| MS.gene057129 | MS.gene92220 | 0.883037 | 6.30E-71 | -1.69E-46 |
| MS.gene057246 | MS.gene92220 | 0.813564 | 2.40E-51 | -1.69E-46 |
| MS.gene057331 | MS.gene92220 | 0.862339 | 5.43E-64 | -1.69E-46 |
| MS.gene057416 | MS.gene92220 | 0.892953 | 9.86E-75 | -1.69E-46 |
| MS.gene057658 | MS.gene92220 | 0.815469 | 9.10E-52 | -1.69E-46 |
| MS.gene057734 | MS.gene92220 | 0.806468 | 8.11E-50 | -1.69E-46 |
| MS.gene057831 | MS.gene92220 | 0.843654 | 1.23E-58 | -1.69E-46 |
| MS.gene057857 | MS.gene92220 | 0.807959 | 3.92E-50 | -1.69E-46 |
| MS.gene057926 | MS.gene92220 | 0.847414 | 1.17E-59 | -1.69E-46 |
| MS.gene058019 | MS.gene92220 | 0.852281 | 5.12E-61 | -1.69E-46 |
| MS.gene058323 | MS.gene92220 | 0.813356 | 2.67E-51 | -1.69E-46 |
| MS.gene058334 | MS.gene92220 | -0.821701 | 3.51E-53 | -1.69E-46 |
| MS.gene058338 | MS.gene92220 | 0.83411 | 3.62E-56 | -1.69E-46 |
| MS.gene05837 | MS.gene92220 | 0.821493 | 3.92E-53 | -1.69E-46 |
| MS.gene058419 | MS.gene92220 | 0.943734 | 7.04E-103 | -1.69E-46 |
| MS.gene058544 | MS.gene92220 | 0.874142 | 8.51E-68 | -1.69E-46 |
| MS.gene058719 | MS.gene92220 | 0.800273 | 1.56E-48 | -1.69E-46 |
| MS.gene058723 | MS.gene92220 | 0.903832 | 2.31E-79 | -1.69E-46 |
| MS.gene058773 | MS.gene92220 | 0.907489 | 4.79E-81 | -1.69E-46 |
| MS.gene058838 | MS.gene92220 | 0.853028 | 3.13E-61 | -1.69E-46 |
| MS.gene058978 | MS.gene92220 | -0.804622 | 1.98E-49 | -1.69E-46 |
| MS.gene059022 | MS.gene92220 | 0.933259 | 2.46E-95 | -1.69E-46 |
| MS.gene059023 | MS.gene92220 | 0.882425 | 1.05E-70 | -1.69E-46 |
| MS.gene059029 | MS.gene92220 | 0.88196 | 1.55E-70 | -1.69E-46 |
| MS.gene059079 | MS.gene92220 | 0.826493 | 2.63E-54 | -1.69E-46 |
| MS.gene05912 | MS.gene92220 | 0.812089 | 5.05E-51 | -1.69E-46 |
| MS.gene05913 | MS.gene92220 | 0.879267 | 1.43E-69 | -1.69E-46 |
| MS.gene05934 | MS.gene92220 | 0.837119 | 6.27E-57 | -1.69E-46 |
| MS.gene059367 | MS.gene92220 | 0.814282 | 1.67E-51 | -1.69E-46 |
| MS.gene059384 | MS.gene92220 | 0.800552 | 1.37E-48 | -1.69E-46 |
| MS.gene059536 | MS.gene92220 | 0.824796 | 6.65E-54 | -1.69E-46 |
| MS.gene059677 | MS.gene92220 | 0.941258 | 5.69E-101 | -1.69E-46 |
| MS.gene059718 | MS.gene92220 | 0.906425 | 1.50E-80 | -1.69E-46 |
| MS.gene059756 | MS.gene92220 | 0.868063 | 8.62E-66 | -1.69E-46 |
| MS.gene059801 | MS.gene92220 | 0.842682 | 2.23E-58 | -1.69E-46 |
| MS.gene059865 | MS.gene92220 | 0.894802 | 1.75E-75 | -1.69E-46 |
| MS.gene059902 | MS.gene92220 | 0.857327 | 1.76E-62 | -1.69E-46 |
| MS.gene059960 | MS.gene92220 | 0.841768 | 3.89E-58 | -1.69E-46 |
| MS.gene060193 | MS.gene92220 | 0.828807 | 7.32E-55 | -1.69E-46 |
| MS.gene060336 | MS.gene92220 | -0.803751 | 3.00E-49 | -1.69E-46 |
| MS.gene060337 | MS.gene92220 | -0.860244 | 2.36E-63 | -1.69E-46 |
| MS.gene060341 | MS.gene92220 | 0.859365 | 4.35E-63 | -1.69E-46 |
| MS.gene060482 | MS.gene92220 | 0.850616 | 1.51E-60 | -1.69E-46 |
| MS.gene060526 | MS.gene92220 | 0.802142 | 6.46E-49 | -1.69E-46 |
| MS.gene060703 | MS.gene92220 | 0.908399 | 1.78E-81 | -1.69E-46 |
| MS.gene060727 | MS.gene92220 | 0.836827 | 7.45E-57 | -1.69E-46 |
| MS.gene060728 | MS.gene92220 | 0.847756 | 9.46E-60 | -1.69E-46 |
| MS.gene060762 | MS.gene92220 | 0.887194 | 1.77E-72 | -1.69E-46 |
| MS.gene060778 | MS.gene92220 | 0.824009 | 1.02E-53 | -1.69E-46 |
| MS.gene06077 | MS.gene92220 | 0.874104 | 8.77E-68 | -1.69E-46 |
| MS.gene060804 | MS.gene92220 | 0.832762 | 7.86E-56 | -1.69E-46 |
| MS.gene060818 | MS.gene92220 | 0.829203 | 5.87E-55 | -1.69E-46 |
| MS.gene060835 | MS.gene92220 | 0.831042 | 2.09E-55 | -1.69E-46 |
| MS.gene06092 | MS.gene92220 | 0.850553 | 1.58E-60 | -1.69E-46 |
| MS.gene06097 | MS.gene92220 | 0.801033 | 1.09E-48 | -1.69E-46 |
| MS.gene060982 | MS.gene92220 | 0.877009 | 8.86E-69 | -1.69E-46 |
| MS.gene061041 | MS.gene92220 | 0.824827 | 6.54E-54 | -1.69E-46 |
| MS.gene061134 | MS.gene92220 | 0.827623 | 1.41E-54 | -1.69E-46 |
| MS.gene061150 | MS.gene92220 | 0.896182 | 4.72E-76 | -1.69E-46 |
| MS.gene061171 | MS.gene92220 | 0.8174 | 3.36E-52 | -1.69E-46 |
| MS.gene061200 | MS.gene92220 | 0.872181 | 3.87E-67 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene074248 | MS.gene92220 | PPI |
| MS.gene074249 | MS.gene92220 | PPI |
| MS.gene54465 | MS.gene92220 | PPI |
| MS.gene92220 | MS.gene92218 | PPI |
| MS.gene074247 | MS.gene92220 | PPI |
| MS.gene92218 | MS.gene92220 | PPI |
| MS.gene80966 | MS.gene92220 | PPI |
| MS.gene074568 | MS.gene92220 | PPI |
| MS.gene76905 | MS.gene92220 | PPI |
| MS.gene92220 | MS.gene074567 | PPI |
| MS.gene76908 | MS.gene92220 | PPI |
| MS.gene074566 | MS.gene92220 | PPI |
| MS.gene92217 | MS.gene92220 | PPI |
| MS.gene92220 | MS.gene074568 | PPI |
| MS.gene92216 | MS.gene92220 | PPI |
| MS.gene074567 | MS.gene92220 | PPI |
| MS.gene54468 | MS.gene92220 | PPI |
| MS.gene80971 | MS.gene92220 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92220.t1 | MTR_7g007120 | 94.737 | 171 | 9 | 0 | 11 | 181 | 11 | 181 | 1.78e-124 | 348 |
| MS.gene92220.t1 | MTR_7g007200 | 94.152 | 171 | 10 | 0 | 11 | 181 | 11 | 181 | 3.33e-124 | 347 |
| MS.gene92220.t1 | MTR_7g007220 | 94.737 | 171 | 9 | 0 | 11 | 181 | 11 | 181 | 3.36e-124 | 347 |
| MS.gene92220.t1 | MTR_7g007120 | 94.706 | 170 | 9 | 0 | 12 | 181 | 12 | 181 | 7.25e-124 | 347 |
| MS.gene92220.t1 | MTR_7g007120 | 94.152 | 171 | 10 | 0 | 11 | 181 | 11 | 181 | 9.54e-124 | 346 |
| MS.gene92220.t1 | MTR_7g007230 | 92.941 | 170 | 12 | 0 | 12 | 181 | 12 | 181 | 5.30e-121 | 339 |
| MS.gene92220.t1 | MTR_6g018310 | 85.475 | 179 | 25 | 1 | 4 | 181 | 2 | 180 | 4.00e-115 | 324 |
| MS.gene92220.t1 | MTR_6g018300 | 84.916 | 179 | 23 | 2 | 4 | 181 | 2 | 177 | 2.84e-112 | 317 |
| MS.gene92220.t1 | MTR_7g007210 | 94.805 | 154 | 8 | 0 | 11 | 164 | 11 | 164 | 2.48e-110 | 313 |
| MS.gene92220.t1 | MTR_4g127870 | 50.641 | 156 | 73 | 3 | 28 | 180 | 15 | 169 | 1.09e-57 | 179 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92220.t1 | AT1G67090 | 71.429 | 182 | 47 | 2 | 1 | 181 | 1 | 178 | 6.50e-94 | 271 |
| MS.gene92220.t1 | AT5G38430 | 70.879 | 182 | 48 | 2 | 1 | 181 | 1 | 178 | 6.15e-93 | 268 |
| MS.gene92220.t1 | AT5G38430 | 70.879 | 182 | 48 | 2 | 1 | 181 | 1 | 178 | 6.15e-93 | 268 |
| MS.gene92220.t1 | AT5G38410 | 70.330 | 182 | 49 | 2 | 1 | 181 | 1 | 178 | 1.30e-92 | 268 |
| MS.gene92220.t1 | AT5G38420 | 70.330 | 182 | 49 | 2 | 1 | 181 | 1 | 178 | 3.51e-92 | 266 |
| MS.gene92220.t1 | AT5G38410 | 68.449 | 187 | 49 | 3 | 1 | 181 | 1 | 183 | 2.53e-90 | 262 |
| MS.gene92220.t1 | AT5G38410 | 67.582 | 182 | 47 | 3 | 1 | 181 | 1 | 171 | 1.08e-85 | 249 |
| MS.gene92220.t1 | AT1G67090 | 65.217 | 115 | 35 | 2 | 1 | 114 | 1 | 111 | 1.01e-45 | 147 |
Find 55 sgRNAs with CRISPR-Local
Find 69 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGAAGTTGATTACCTTATA+AGG | 0.266546 | 7.1:-87111458 | MS.gene92220:CDS |
| CAACCCATCCCTTCCTTATA+AGG | 0.273690 | 7.1:+87111445 | None:intergenic |
| TCCTTGTTGATCTTTGTAAC+TGG | 0.307724 | 7.1:+87111807 | None:intergenic |
| GGCGCGGTGGCTCCATTTGT+TGG | 0.347642 | 7.1:-87111852 | MS.gene92220:CDS |
| GAAGGGATGGGTTGCTTGCT+TGG | 0.368783 | 7.1:-87111436 | MS.gene92220:CDS |
| GATACTATGATGGACGTTAC+TGG | 0.371866 | 7.1:-87111235 | MS.gene92220:CDS |
| TTCTTTCGCCAATTGTTCTC+TGG | 0.378466 | 7.1:+87111476 | None:intergenic |
| CGATTCTTCTCAAGTGTTGA+AGG | 0.396980 | 7.1:-87111180 | MS.gene92220:CDS |
| GCCAATTGTTCTCTGGTCAA+TGG | 0.405140 | 7.1:+87111483 | None:intergenic |
| ACCATTGACCAGAGAACAAT+TGG | 0.409622 | 7.1:-87111484 | MS.gene92220:CDS |
| ATGTGGAAGTTGCCTTTGTT+TGG | 0.411503 | 7.1:-87111209 | MS.gene92220:CDS |
| ATATAGGTGTGGCCTCCTAT+TGG | 0.416991 | 7.1:-87111540 | MS.gene92220:intron |
| GTTGGACTCAAGTCCATGGC+TGG | 0.431505 | 7.1:-87111834 | MS.gene92220:CDS |
| TCAAACTTCTTCTTGCCAAT+AGG | 0.435101 | 7.1:+87111525 | None:intergenic |
| ATGATACGGACAAAGGCATC+AGG | 0.443523 | 7.1:+87111131 | None:intergenic |
| TCTTCCACCATTGCTTGTGA+TGG | 0.455939 | 7.1:+87111776 | None:intergenic |
| CTTCAACACTTGAGAAGAAT+CGG | 0.461194 | 7.1:+87111181 | None:intergenic |
| CGCGCCTCGTCGGTTCAATC+CGG | 0.461844 | 7.1:-87111873 | MS.gene92220:CDS |
| GATGCCTTTGTCCGTATCAT+CGG | 0.484184 | 7.1:-87111128 | MS.gene92220:CDS |
| TCCACCATTGCTTGTGATGG+AGG | 0.503381 | 7.1:+87111779 | None:intergenic |
| CCTTGTTGATCTTTGTAACT+GGG | 0.505692 | 7.1:+87111808 | None:intergenic |
| ATTACCTTATAAGGAAGGGA+TGG | 0.507588 | 7.1:-87111449 | MS.gene92220:CDS |
| AACTTCTTCTTGCCAATAGG+AGG | 0.515017 | 7.1:+87111528 | None:intergenic |
| ATTTGTTGGACTCAAGTCCA+TGG | 0.520007 | 7.1:-87111838 | MS.gene92220:CDS |
| AGTTGATTACCTTATAAGGA+AGG | 0.522099 | 7.1:-87111454 | MS.gene92220:CDS |
| ATGGACTTGAGTCCAACAAA+TGG | 0.526746 | 7.1:+87111840 | None:intergenic |
| CATAGTATCCTGGTGACTTG+TGG | 0.542155 | 7.1:+87111249 | None:intergenic |
| CGTGAGAACCACAAGTCACC+AGG | 0.544938 | 7.1:-87111257 | MS.gene92220:CDS |
| AACTGTAGTTACAGCTGAAG+AGG | 0.546956 | 7.1:+87111899 | None:intergenic |
| TTACCTTATAAGGAAGGGAT+GGG | 0.559428 | 7.1:-87111448 | MS.gene92220:CDS |
| AACAAATGGAGCCACCGCGC+CGG | 0.560979 | 7.1:+87111854 | None:intergenic |
| TACAGTTAACCGCGCCTCGT+CGG | 0.566785 | 7.1:-87111883 | MS.gene92220:CDS |
| GTTGATTACCTTATAAGGAA+GGG | 0.567383 | 7.1:-87111453 | MS.gene92220:CDS |
| TAACGTCCATCATAGTATCC+TGG | 0.569613 | 7.1:+87111239 | None:intergenic |
| CAATGAACTTAGTAGACTGC+AGG | 0.571658 | 7.1:+87111056 | None:intergenic |
| AAGTCACCAGGATACTATGA+TGG | 0.574009 | 7.1:-87111245 | MS.gene92220:CDS |
| CGGATTGAACCGACGAGGCG+CGG | 0.577823 | 7.1:+87111874 | None:intergenic |
| CGTTGTCGAATCCGATGATA+CGG | 0.579522 | 7.1:+87111117 | None:intergenic |
| CTGGTGACTTGTGGTTCTCA+CGG | 0.595328 | 7.1:+87111258 | None:intergenic |
| GAATCGGTTGCTCCAAACAA+AGG | 0.598394 | 7.1:+87111197 | None:intergenic |
| AATTGTTCTCTGGTCAATGG+TGG | 0.600961 | 7.1:+87111486 | None:intergenic |
| ACCTCCATCACAAGCAATGG+TGG | 0.602188 | 7.1:-87111780 | MS.gene92220:CDS |
| TTGCTTGGAATTTGAGACCG+AGG | 0.613015 | 7.1:-87111421 | MS.gene92220:intron |
| TGTAACTGGGAAGCCAGCCA+TGG | 0.615947 | 7.1:+87111821 | None:intergenic |
| GTTCTCTGGTCAATGGTGGA+AGG | 0.618328 | 7.1:+87111490 | None:intergenic |
| GTCGGTTCAATCCGGCGCGG+TGG | 0.622925 | 7.1:-87111865 | MS.gene92220:CDS |
| ATTACCTCCATCACAAGCAA+TGG | 0.623970 | 7.1:-87111783 | MS.gene92220:CDS |
| TGGAAGAGTAAACTGCATGC+AGG | 0.652563 | 7.1:-87111760 | MS.gene92220:intron |
| AGCTGAAGAGGAGATCATAG+AGG | 0.655372 | 7.1:+87111911 | None:intergenic |
| TGATACGGACAAAGGCATCA+GGG | 0.656050 | 7.1:+87111132 | None:intergenic |
| CCCAGTTACAAAGATCAACA+AGG | 0.670594 | 7.1:-87111808 | MS.gene92220:CDS |
| CGCGCCGGATTGAACCGACG+AGG | 0.686777 | 7.1:+87111869 | None:intergenic |
| GAATCCGATGATACGGACAA+AGG | 0.687909 | 7.1:+87111124 | None:intergenic |
| CTCGTCGGTTCAATCCGGCG+CGG | 0.728671 | 7.1:-87111868 | MS.gene92220:CDS |
| ATGGACGTTACTGGACAATG+TGG | 0.742197 | 7.1:-87111226 | MS.gene92220:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TACTATGAATAAGTTTTAAT+TGG | + | chr7.1:87111299-87111318 | None:intergenic | 15.0% |
| !! | AATAACATTAATAGAGTCAT+TGG | - | chr7.1:87111368-87111387 | MS.gene92220:intron | 20.0% |
| !! | AATGTACAAAAGATTAAGTT+AGG | + | chr7.1:87111416-87111435 | None:intergenic | 20.0% |
| !! | ATGTACAAAAGATTAAGTTA+GGG | + | chr7.1:87111415-87111434 | None:intergenic | 20.0% |
| !! | TTTGTACATTACTACTATAT+AGG | - | chr7.1:87111426-87111445 | MS.gene92220:CDS | 20.0% |
| !!! | GATTTCATGTTTTTTTCATA+AGG | - | chr7.1:87111332-87111351 | MS.gene92220:intron | 20.0% |
| ! | AGTAAAGTAATATTAGACCT+CGG | + | chr7.1:87111581-87111600 | None:intergenic | 25.0% |
| ! | TGTACAAAAGATTAAGTTAG+GGG | + | chr7.1:87111414-87111433 | None:intergenic | 25.0% |
| !! | AAGAAGTTGATTACCTTATA+AGG | - | chr7.1:87111524-87111543 | MS.gene92220:CDS | 25.0% |
| !!! | TGTTTGTTTTGATTTGTACT+TGG | - | chr7.1:87111677-87111696 | MS.gene92220:intron | 25.0% |
| ACATTACTACTATATAGGTG+TGG | - | chr7.1:87111431-87111450 | MS.gene92220:CDS | 30.0% | |
| AGTTGATTACCTTATAAGGA+AGG | - | chr7.1:87111528-87111547 | MS.gene92220:CDS | 30.0% | |
| GTTGATTACCTTATAAGGAA+GGG | - | chr7.1:87111529-87111548 | MS.gene92220:CDS | 30.0% | |
| ! | GGGCTTAATAAAATTTTGCA+TGG | + | chr7.1:87111394-87111413 | None:intergenic | 30.0% |
| !! | ATATAATCGTTGTTTTGTCG+CGG | - | chr7.1:87111620-87111639 | MS.gene92220:intron | 30.0% |
| ATTACCTTATAAGGAAGGGA+TGG | - | chr7.1:87111533-87111552 | MS.gene92220:CDS | 35.0% | |
| CCTTGTTGATCTTTGTAACT+GGG | + | chr7.1:87111177-87111196 | None:intergenic | 35.0% | |
| CTTCAACACTTGAGAAGAAT+CGG | + | chr7.1:87111804-87111823 | None:intergenic | 35.0% | |
| TCAAACTTCTTCTTGCCAAT+AGG | + | chr7.1:87111460-87111479 | None:intergenic | 35.0% | |
| TCCTTGTTGATCTTTGTAAC+TGG | + | chr7.1:87111178-87111197 | None:intergenic | 35.0% | |
| TTACCTTATAAGGAAGGGAT+GGG | - | chr7.1:87111534-87111553 | MS.gene92220:CDS | 35.0% | |
| AACTGTAGTTACAGCTGAAG+AGG | + | chr7.1:87111086-87111105 | None:intergenic | 40.0% | |
| AACTTCTTCTTGCCAATAGG+AGG | + | chr7.1:87111457-87111476 | None:intergenic | 40.0% | |
| AAGTCACCAGGATACTATGA+TGG | - | chr7.1:87111737-87111756 | MS.gene92220:intron | 40.0% | |
| AATTGTTCTCTGGTCAATGG+TGG | + | chr7.1:87111499-87111518 | None:intergenic | 40.0% | |
| ACCATTGACCAGAGAACAAT+TGG | - | chr7.1:87111498-87111517 | MS.gene92220:CDS | 40.0% | |
| ATGGACTTGAGTCCAACAAA+TGG | + | chr7.1:87111145-87111164 | None:intergenic | 40.0% | |
| ATGTGGAAGTTGCCTTTGTT+TGG | - | chr7.1:87111773-87111792 | MS.gene92220:CDS | 40.0% | |
| ATTACCTCCATCACAAGCAA+TGG | - | chr7.1:87111199-87111218 | MS.gene92220:CDS | 40.0% | |
| CAAATTTGTGACTGTGACCT+TGG | + | chr7.1:87111646-87111665 | None:intergenic | 40.0% | |
| CCCAGTTACAAAGATCAACA+AGG | - | chr7.1:87111174-87111193 | MS.gene92220:CDS | 40.0% | |
| GTACTTGGTTACTTGCAGAA+AGG | - | chr7.1:87111692-87111711 | MS.gene92220:intron | 40.0% | |
| TAACGTCCATCATAGTATCC+TGG | + | chr7.1:87111746-87111765 | None:intergenic | 40.0% | |
| TTCTTTCGCCAATTGTTCTC+TGG | + | chr7.1:87111509-87111528 | None:intergenic | 40.0% | |
| ! | ATTTGTTGGACTCAAGTCCA+TGG | - | chr7.1:87111144-87111163 | MS.gene92220:CDS | 40.0% |
| !! | CGATTCTTCTCAAGTGTTGA+AGG | - | chr7.1:87111802-87111821 | MS.gene92220:CDS | 40.0% |
| !! | GATACTATGATGGACGTTAC+TGG | - | chr7.1:87111747-87111766 | MS.gene92220:intron | 40.0% |
| AGCTGAAGAGGAGATCATAG+AGG | + | chr7.1:87111074-87111093 | None:intergenic | 45.0% | |
| ATATAGGTGTGGCCTCCTAT+TGG | - | chr7.1:87111442-87111461 | MS.gene92220:CDS | 45.0% | |
| ATGGACGTTACTGGACAATG+TGG | - | chr7.1:87111756-87111775 | MS.gene92220:intron | 45.0% | |
| CAACCCATCCCTTCCTTATA+AGG | + | chr7.1:87111540-87111559 | None:intergenic | 45.0% | |
| CATAGTATCCTGGTGACTTG+TGG | + | chr7.1:87111736-87111755 | None:intergenic | 45.0% | |
| CGTTGTCGAATCCGATGATA+CGG | + | chr7.1:87111868-87111887 | None:intergenic | 45.0% | |
| GAATCCGATGATACGGACAA+AGG | + | chr7.1:87111861-87111880 | None:intergenic | 45.0% | |
| GAATCGGTTGCTCCAAACAA+AGG | + | chr7.1:87111788-87111807 | None:intergenic | 45.0% | |
| GATGCCTTTGTCCGTATCAT+CGG | - | chr7.1:87111854-87111873 | MS.gene92220:CDS | 45.0% | |
| GCCAATTGTTCTCTGGTCAA+TGG | + | chr7.1:87111502-87111521 | None:intergenic | 45.0% | |
| TCTTCCACCATTGCTTGTGA+TGG | + | chr7.1:87111209-87111228 | None:intergenic | 45.0% | |
| TGGAAGAGTAAACTGCATGC+AGG | - | chr7.1:87111222-87111241 | MS.gene92220:CDS | 45.0% | |
| ! | TTGCTTGGAATTTGAGACCG+AGG | - | chr7.1:87111561-87111580 | MS.gene92220:intron | 45.0% |
| !! | ATGATACGGACAAAGGCATC+AGG | + | chr7.1:87111854-87111873 | None:intergenic | 45.0% |
| !! | TGATACGGACAAAGGCATCA+GGG | + | chr7.1:87111853-87111872 | None:intergenic | 45.0% |
| ACCTCCATCACAAGCAATGG+TGG | - | chr7.1:87111202-87111221 | MS.gene92220:CDS | 50.0% | |
| TCCACCATTGCTTGTGATGG+AGG | + | chr7.1:87111206-87111225 | None:intergenic | 50.0% | |
| ! | CTGGTGACTTGTGGTTCTCA+CGG | + | chr7.1:87111727-87111746 | None:intergenic | 50.0% |
| ! | GTTCTCTGGTCAATGGTGGA+AGG | + | chr7.1:87111495-87111514 | None:intergenic | 50.0% |
| CGTGAGAACCACAAGTCACC+AGG | - | chr7.1:87111725-87111744 | MS.gene92220:intron | 55.0% | |
| GTTGGACTCAAGTCCATGGC+TGG | - | chr7.1:87111148-87111167 | MS.gene92220:CDS | 55.0% | |
| TACAGTTAACCGCGCCTCGT+CGG | - | chr7.1:87111099-87111118 | MS.gene92220:CDS | 55.0% | |
| TGTAACTGGGAAGCCAGCCA+TGG | + | chr7.1:87111164-87111183 | None:intergenic | 55.0% | |
| !! | GAAGGGATGGGTTGCTTGCT+TGG | - | chr7.1:87111546-87111565 | MS.gene92220:intron | 55.0% |
| !! | TCGTTGTTTTGTCGCGGCCA+AGG | - | chr7.1:87111626-87111645 | MS.gene92220:intron | 55.0% |
| AACAAATGGAGCCACCGCGC+CGG | + | chr7.1:87111131-87111150 | None:intergenic | 60.0% | |
| CGGATTGAACCGACGAGGCG+CGG | + | chr7.1:87111111-87111130 | None:intergenic | 65.0% | |
| GGCGCGGTGGCTCCATTTGT+TGG | - | chr7.1:87111130-87111149 | MS.gene92220:CDS | 65.0% | |
| !! | CGCGCCTCGTCGGTTCAATC+CGG | - | chr7.1:87111109-87111128 | MS.gene92220:CDS | 65.0% |
| !! | CTCGTCGGTTCAATCCGGCG+CGG | - | chr7.1:87111114-87111133 | MS.gene92220:CDS | 65.0% |
| CGCGCCGGATTGAACCGACG+AGG | + | chr7.1:87111116-87111135 | None:intergenic | 70.0% | |
| ! | GTCGGTTCAATCCGGCGCGG+TGG | - | chr7.1:87111117-87111136 | MS.gene92220:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 87111064 | 87111940 | 87111064 | ID=MS.gene92220 |
| chr7.1 | mRNA | 87111064 | 87111940 | 87111064 | ID=MS.gene92220.t1;Parent=MS.gene92220 |
| chr7.1 | exon | 87111761 | 87111940 | 87111761 | ID=MS.gene92220.t1.exon1;Parent=MS.gene92220.t1 |
| chr7.1 | CDS | 87111761 | 87111940 | 87111761 | ID=cds.MS.gene92220.t1;Parent=MS.gene92220.t1 |
| chr7.1 | exon | 87111422 | 87111556 | 87111422 | ID=MS.gene92220.t1.exon2;Parent=MS.gene92220.t1 |
| chr7.1 | CDS | 87111422 | 87111556 | 87111422 | ID=cds.MS.gene92220.t1;Parent=MS.gene92220.t1 |
| chr7.1 | exon | 87111064 | 87111294 | 87111064 | ID=MS.gene92220.t1.exon3;Parent=MS.gene92220.t1 |
| chr7.1 | CDS | 87111064 | 87111294 | 87111064 | ID=cds.MS.gene92220.t1;Parent=MS.gene92220.t1 |
| Gene Sequence |
| Protein sequence |
