AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene32234


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene32234.t1 MTR_8g059435 95.794 428 14 2 1 428 1 424 0.0 830
MS.gene32234.t1 MTR_6g007607 27.373 453 252 18 2 425 45 449 3.39e-31 124
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene32234.t1 AT3G15520 61.987 463 131 7 1 425 1 456 0.0 545
MS.gene32234.t1 AT3G15520 61.987 463 131 7 1 425 1 456 0.0 545
MS.gene32234.t1 AT3G15520 74.684 316 79 1 111 425 1 316 4.24e-173 487
MS.gene32234.t1 AT3G15520 55.914 372 119 7 1 334 1 365 1.17e-129 379
MS.gene32234.t1 AT3G01480 25.986 431 279 12 15 425 21 431 1.12e-33 131
MS.gene32234.t1 AT3G01480 25.893 336 215 9 15 333 21 339 2.09e-21 95.5

Find 112 sgRNAs with CRISPR-Local

Find 347 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCTGCATCCTGTTCCTTTA+TGG 0.082861 8.3:-48185689 None:intergenic
GCAAAATTCCCTGCAGTTAA+AGG 0.157758 8.3:-48186708 None:intergenic
GTTCTGCCTCTATCTGTTTA+TGG 0.176620 8.3:+48187909 MS.gene32234:CDS
GCCTTCATGTTAGGGCTTGC+AGG 0.251495 8.3:-48183641 None:intergenic
GTGCATTCAACTTTAATAGA+TGG 0.257426 8.3:+48185207 MS.gene32234:CDS
ACCTGTATGGCCTTCATGTT+AGG 0.302845 8.3:-48183650 None:intergenic
AGAGCAACTTCACCAGTTCT+AGG 0.313603 8.3:-48183605 None:intergenic
CATCGTCACATTGGCCTAAT+TGG 0.331013 8.3:-48183430 None:intergenic
ACTGAAGGAAAAGGCCTCTT+TGG 0.331824 8.3:+48185185 MS.gene32234:CDS
TCGGCAACACAAGGCGGTCT+TGG 0.340467 8.3:-48188452 None:intergenic
ACTGAACGGTGGAAGCAATT+AGG 0.367614 8.3:-48183511 None:intergenic
CCTCTGTTGTAGGCCGGCTT+AGG 0.375646 8.3:+48188212 MS.gene32234:intron
CCTGTTCCTTTATGGATTGA+AGG 0.378050 8.3:-48185681 None:intergenic
GAACTGGTGAAGTTGCTCTT+AGG 0.391945 8.3:+48183609 MS.gene32234:CDS
TTCCGAGAGAATAGCTTGAT+TGG 0.392537 8.3:-48187681 None:intergenic
TGCTTCACAAAGAGCCAATT+AGG 0.405413 8.3:+48183416 MS.gene32234:CDS
CACCGTTCAGTTCAGTTCCA+TGG 0.406317 8.3:+48183523 MS.gene32234:CDS
CCCTAACATGAAGGCCATAC+AGG 0.417871 8.3:+48183649 MS.gene32234:CDS
CCTTCAATCCATAAAGGAAC+AGG 0.418865 8.3:+48185681 MS.gene32234:CDS
CTGTTGTAGGCCGGCTTAGG+AGG 0.421036 8.3:+48188215 MS.gene32234:intron
AGATGAAAAGGATTCTATAT+TGG 0.426146 8.3:+48185146 MS.gene32234:CDS
GTGATGGATGGAGCATATAA+TGG 0.428328 8.3:+48187641 MS.gene32234:CDS
TTCCCCTCCATTGTTCCATA+AGG 0.429471 8.3:-48184448 None:intergenic
ACCACTTGTCTTATCTAGTC+CGG 0.433802 8.3:-48187705 None:intergenic
TTTCTCTCTTCTCCACCAAC+TGG 0.443642 8.3:-48186237 None:intergenic
ATTCCACAGAGGAAACCTTA+TGG 0.445351 8.3:+48184433 MS.gene32234:CDS
GTTGAGTTTATCATTGAGAA+AGG 0.445726 8.3:+48186195 MS.gene32234:CDS
TATTCAGCTCCTTTAACTGC+AGG 0.448722 8.3:+48186699 MS.gene32234:CDS
CGTTCCGCAAAGCTTATTGA+AGG 0.449931 8.3:+48188429 MS.gene32234:CDS
TTAGATAGCGGTAGATGAAA+AGG 0.452704 8.3:+48185134 MS.gene32234:intron
TAAACAGATAGAGGCAGAAC+TGG 0.454960 8.3:-48187906 None:intergenic
AGTTCTCCTTCAATCCATAA+AGG 0.455076 8.3:+48185675 MS.gene32234:CDS
CAAGCTATTCTCTCGGAAAC+CGG 0.460980 8.3:+48187686 MS.gene32234:CDS
CCTGTATGGCCTTCATGTTA+GGG 0.464546 8.3:-48183649 None:intergenic
GACTTTGTGTGGCGGAAGAA+AGG 0.481623 8.3:-48183377 None:intergenic
TGCATTCAACTTTAATAGAT+GGG 0.484069 8.3:+48185208 MS.gene32234:CDS
GACACAAAGGTTCCTAGAAC+TGG 0.487336 8.3:+48183593 MS.gene32234:CDS
GTTCTAGGAACCTTTGTGTC+CGG 0.488880 8.3:-48183590 None:intergenic
TTGGCCTTCAATAAGCTTTG+CGG 0.489836 8.3:-48188433 None:intergenic
CAATATCCAGTGTAGATTGA+AGG 0.492806 8.3:-48185726 None:intergenic
CTTAGGAGGGATATCATTTG+AGG 0.495914 8.3:+48188229 MS.gene32234:CDS
TAAAACAACATTAAGTGTAC+AGG 0.496441 8.3:+48187778 MS.gene32234:CDS
TACAGAATCGCATTCGCAGC+GGG 0.497810 8.3:-48183563 None:intergenic
AGAACAAAACACAACCTGTA+TGG 0.501201 8.3:-48183663 None:intergenic
TGTTTATGGAGCAGTTGCTA+TGG 0.502880 8.3:+48187923 MS.gene32234:CDS
AGACGTACTCAACTTTCCTT+CGG 0.506638 8.3:-48188471 None:intergenic
AAAGGGTGGTGGCGAGTGAT+CGG 0.512904 8.3:-48183359 None:intergenic
AGCAGAACTAGAGACATTAC+AGG 0.516026 8.3:+48185750 MS.gene32234:CDS
ACTGCTCCATAAACAGATAG+AGG 0.517132 8.3:-48187915 None:intergenic
AAATGATATCCCTCCTAAGC+CGG 0.522397 8.3:-48188225 None:intergenic
GCGAGTGATCGGAATGTTGA+AGG 0.523573 8.3:-48183348 None:intergenic
TTCAACTTTAATAGATGGGA+AGG 0.524283 8.3:+48185212 MS.gene32234:CDS
ACTTTGTGTGGCGGAAGAAA+GGG 0.525426 8.3:-48183376 None:intergenic
ATGTGCAGATATACCACCAT+AGG 0.525447 8.3:+48188366 MS.gene32234:intron
TCCAGCGGGCATTATTTCCA+AGG 0.533277 8.3:-48187738 None:intergenic
TTCCAATCAAGCTATTCTCT+CGG 0.543467 8.3:+48187679 MS.gene32234:CDS
CCTTCATGTTAGGGCTTGCA+GGG 0.543469 8.3:-48183640 None:intergenic
TTCGAGAAGGTGACTTTGTG+TGG 0.543630 8.3:-48183388 None:intergenic
AGGGGCTCAAATTGTCCAGC+GGG 0.545527 8.3:-48187752 None:intergenic
GGAGGGATATCATTTGAGGA+AGG 0.545622 8.3:+48188233 MS.gene32234:CDS
AACTTTCCTTCGGCAACACA+AGG 0.546212 8.3:-48188461 None:intergenic
TCTGTATTCGCCGGACACAA+AGG 0.546228 8.3:+48183580 MS.gene32234:CDS
CCCTGCAAGCCCTAACATGA+AGG 0.549248 8.3:+48183640 MS.gene32234:CDS
ACCAGCGGAACTGAAGGAAA+AGG 0.552137 8.3:+48185176 MS.gene32234:CDS
AAGATATTTCGTATCTGCTG+AGG 0.558328 8.3:+48184410 MS.gene32234:CDS
ACGGTGGAAGCAATTAGGAT+TGG 0.562553 8.3:-48183506 None:intergenic
ATATTGCGGCAACAGGCACC+TGG 0.563706 8.3:+48185891 MS.gene32234:intron
CATATCCTTTAGGTGATGGA+TGG 0.564081 8.3:+48187629 MS.gene32234:intron
TTTATCATTGAGAAAGGAGA+CGG 0.566228 8.3:+48186201 MS.gene32234:CDS
TGTTGTAGGCCGGCTTAGGA+GGG 0.566790 8.3:+48188216 MS.gene32234:intron
GGCTCATAACGAAGCTTCTG+AGG 0.571419 8.3:+48187944 MS.gene32234:CDS
TCTGTTGCCGGGGCAATACA+CGG 0.572281 8.3:+48185923 MS.gene32234:CDS
CCAGCGGGCATTATTTCCAA+GGG 0.572993 8.3:-48187737 None:intergenic
AAGTATACCAGCGGAACTGA+AGG 0.574421 8.3:+48185170 MS.gene32234:CDS
AAGTGGTTACAATGTTCCCT+TGG 0.582253 8.3:+48187721 MS.gene32234:CDS
GAGAATATCTCTCCCTATGG+TGG 0.583172 8.3:-48188379 None:intergenic
GAGGGATATCATTTGAGGAA+GGG 0.583536 8.3:+48188234 MS.gene32234:CDS
AAACCTTATGGAACAATGGA+GGG 0.584507 8.3:+48184445 MS.gene32234:CDS
GGGGAGAATATCTCTCCCTA+TGG 0.590339 8.3:-48188382 None:intergenic
GGATATTCCGTGTATTGCCC+CGG 0.591341 8.3:-48185930 None:intergenic
TGTGAACCTTCAATCTACAC+TGG 0.593107 8.3:+48185720 MS.gene32234:CDS
GTTCCATAAGGTTTCCTCTG+TGG 0.593482 8.3:-48184436 None:intergenic
TGCGGAACGAATGATATCCC+CGG 0.594728 8.3:-48188415 None:intergenic
CCCTTGGAAATAATGCCCGC+TGG 0.595063 8.3:+48187737 MS.gene32234:CDS
TAAAGTTGAATGCACCAAAG+AGG 0.604599 8.3:-48185199 None:intergenic
CTGACGTGTCATCGTCACAT+TGG 0.604736 8.3:-48183439 None:intergenic
ATTCAGCTCCTTTAACTGCA+GGG 0.605738 8.3:+48186700 MS.gene32234:CDS
GAAACCTTATGGAACAATGG+AGG 0.616389 8.3:+48184444 MS.gene32234:CDS
AGACCGCCTTGTGTTGCCGA+AGG 0.619816 8.3:+48188455 MS.gene32234:CDS
AGAAGACACGTAAGGAACCA+TGG 0.625125 8.3:-48183540 None:intergenic
TGTGGCGGAAGAAAGGGTGG+TGG 0.625221 8.3:-48183370 None:intergenic
GAGGAAACCTTATGGAACAA+TGG 0.627363 8.3:+48184441 MS.gene32234:CDS
GGCAACAGAAAAGATAGACC+AGG 0.630813 8.3:-48185909 None:intergenic
AACCTTATGGAACAATGGAG+GGG 0.632285 8.3:+48184446 MS.gene32234:CDS
GTGAAGCAGAATATTCGAGA+AGG 0.633649 8.3:-48183401 None:intergenic
TGTGACGATGACACGTCAGT+TGG 0.634510 8.3:+48183443 MS.gene32234:CDS
TTGTGTGGCGGAAGAAAGGG+TGG 0.634669 8.3:-48183373 None:intergenic
TGTGCAGATATACCACCATA+GGG 0.644025 8.3:+48188367 MS.gene32234:intron
GGCAATACACGGAATATCCA+CGG 0.644795 8.3:+48185934 MS.gene32234:CDS
GAATGCGATTCTGTATTCGC+CGG 0.647570 8.3:+48183571 MS.gene32234:CDS
ATGTTGAAGGAAGAAGAGAG+AGG 0.656967 8.3:-48183335 None:intergenic
AACCATGGAACTGAACTGAA+CGG 0.659365 8.3:-48183525 None:intergenic
GCAGCGGGAGAAGACACGTA+AGG 0.664077 8.3:-48183548 None:intergenic
TTTCCTTCGGCAACACAAGG+CGG 0.665679 8.3:-48188458 None:intergenic
ACCGGACTAGATAAGACAAG+TGG 0.667393 8.3:+48187704 MS.gene32234:CDS
CGTCAGTTGGTATAACTCTG+AGG 0.670638 8.3:+48183456 MS.gene32234:CDS
GAGAAGGTGACTTTGTGTGG+CGG 0.672767 8.3:-48183385 None:intergenic
ATACAGAATCGCATTCGCAG+CGG 0.692269 8.3:-48183564 None:intergenic
AAGGGGCTCAAATTGTCCAG+CGG 0.695442 8.3:-48187753 None:intergenic
TATATTGGCAAGTATACCAG+CGG 0.697073 8.3:+48185161 MS.gene32234:CDS
CATGGAACTGAACTGAACGG+TGG 0.719811 8.3:-48183522 None:intergenic
ATCTGCTGAGGATTCCACAG+AGG 0.751616 8.3:+48184422 MS.gene32234:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAAAAAGATTACTAATT+AGG - chr8.3:48188186-48188205 None:intergenic 10.0%
!!! AATATTTTAATAAACTTATG+TGG + chr8.3:48183733-48183752 MS.gene32234:intron 10.0%
!!! ATTTTAAGAAAACAAATATA+AGG - chr8.3:48188053-48188072 None:intergenic 10.0%
!! ATAAAAAGTTCATGATTAAT+AGG - chr8.3:48186957-48186976 None:intergenic 15.0%
!! TGAAATAGTTAATTGTAAAT+TGG + chr8.3:48184074-48184093 MS.gene32234:intron 15.0%
!! TTAATGTGAAACTAATATAA+GGG + chr8.3:48187283-48187302 MS.gene32234:intron 15.0%
!! TTTAATGTGAAACTAATATA+AGG + chr8.3:48187282-48187301 MS.gene32234:intron 15.0%
!!! AAATTTCAAGTAGAAAATAT+AGG - chr8.3:48187168-48187187 None:intergenic 15.0%
!!! AATCAAAATATTGCAAATTT+TGG - chr8.3:48184274-48184293 None:intergenic 15.0%
!!! ACTTAATGTTGTTTTATAAA+GGG - chr8.3:48187774-48187793 None:intergenic 15.0%
!!! ATGTTTTTAAAAACTAGAAT+GGG + chr8.3:48188130-48188149 MS.gene32234:intron 15.0%
!!! CTCTTTTTTGTTTTTATTTT+GGG + chr8.3:48188338-48188357 MS.gene32234:intron 15.0%
!!! TCTCTTTTTTGTTTTTATTT+TGG + chr8.3:48188337-48188356 MS.gene32234:intron 15.0%
!!! TCTTTTTTGTTTTTATTTTG+GGG + chr8.3:48188339-48188358 MS.gene32234:intron 15.0%
!!! TTGAAAATTTTTAGATTAGA+GGG - chr8.3:48184038-48184057 None:intergenic 15.0%
!! AAAAAAGTTAAACTCCAAAA+TGG - chr8.3:48188311-48188330 None:intergenic 20.0%
!! AATCCATAAACATTAAGAAA+AGG + chr8.3:48186348-48186367 MS.gene32234:intron 20.0%
!! AGATAGAAGAAAAATTGATA+AGG - chr8.3:48187981-48188000 None:intergenic 20.0%
!! CAATTGAAAAGAAAAAACAA+AGG - chr8.3:48188157-48188176 None:intergenic 20.0%
!! CTATGATAAAAGAAATGTAA+GGG + chr8.3:48188001-48188020 MS.gene32234:intron 20.0%
!! CTTAAAAATGTATTTGTAAG+TGG - chr8.3:48187570-48187589 None:intergenic 20.0%
!! TAATGTTGAAAATGATCAAA+TGG + chr8.3:48184222-48184241 MS.gene32234:intron 20.0%
!! TACAATTAATCAAATAATCG+AGG - chr8.3:48185256-48185275 None:intergenic 20.0%
!! TCAATGTAACACTTATATTA+TGG + chr8.3:48185846-48185865 MS.gene32234:intron 20.0%
!! TCTATGATAAAAGAAATGTA+AGG + chr8.3:48188000-48188019 MS.gene32234:intron 20.0%
!! TTTGAATAGAGAATAAAGAA+TGG + chr8.3:48187056-48187075 MS.gene32234:intron 20.0%
!!! AAAATTACTTGTTTTGCTTT+TGG + chr8.3:48187025-48187044 MS.gene32234:intron 20.0%
!!! AAAGTATTAGAAAGAAAGTT+GGG + chr8.3:48184797-48184816 MS.gene32234:intron 20.0%
!!! AAATAGGTTACATTTCTTTT+TGG - chr8.3:48184008-48184027 None:intergenic 20.0%
!!! AAATTACTTGTTTTGCTTTT+GGG + chr8.3:48187026-48187045 MS.gene32234:intron 20.0%
!!! AATTTTCATAAATGCATTGA+CGG + chr8.3:48186405-48186424 MS.gene32234:intron 20.0%
!!! ATGAAAAATCACTGATTATT+AGG + chr8.3:48184841-48184860 MS.gene32234:intron 20.0%
!!! ATTGATTCAGTCATTTTAAT+TGG - chr8.3:48185831-48185850 None:intergenic 20.0%
!!! CACTTAATGTTGTTTTATAA+AGG - chr8.3:48187775-48187794 None:intergenic 20.0%
!!! CACTTACAAATACATTTTTA+AGG + chr8.3:48187568-48187587 MS.gene32234:intron 20.0%
!!! CATCTTCATAATTTTTTTGT+AGG + chr8.3:48186154-48186173 MS.gene32234:intron 20.0%
!!! CATGTTTTTAAAAACTAGAA+TGG + chr8.3:48188129-48188148 MS.gene32234:intron 20.0%
!!! CGTGATAAAATTTTTGTATA+AGG + chr8.3:48187122-48187141 MS.gene32234:intron 20.0%
!!! CTTAATGTTGTTTTATAAAG+GGG - chr8.3:48187773-48187792 None:intergenic 20.0%
!!! CTTGAAAATTTTTAGATTAG+AGG - chr8.3:48184039-48184058 None:intergenic 20.0%
!!! TATTTATTTTGAGATAAGCT+TGG + chr8.3:48186458-48186477 MS.gene32234:intron 20.0%
!!! TATTTTTTCTGTTAGAAAGA+AGG - chr8.3:48185294-48185313 None:intergenic 20.0%
!!! TGATTTATTTGTTATGTACA+AGG + chr8.3:48183704-48183723 MS.gene32234:intron 20.0%
!!! TGTTCATTTTTTTACTTGAA+TGG + chr8.3:48186891-48186910 MS.gene32234:intron 20.0%
!!! TTATTTTCTTATCTGTCTTT+TGG + chr8.3:48187868-48187887 MS.gene32234:intron 20.0%
!!! TTCTTTGCTAAAACTTATTT+TGG + chr8.3:48186533-48186552 MS.gene32234:intron 20.0%
!!! TTTATTCTAAAAATAGCCTT+TGG + chr8.3:48184112-48184131 MS.gene32234:intron 20.0%
!!! TTTGTTATATAATTCTCACA+TGG + chr8.3:48185591-48185610 MS.gene32234:intron 20.0%
! AAATTCAATAGTCAGAAGAA+GGG + chr8.3:48186120-48186139 MS.gene32234:intron 25.0%
! AATATATGAAAAGACACCAA+AGG - chr8.3:48184131-48184150 None:intergenic 25.0%
! ACATTCTTAAACTTATGTTC+AGG + chr8.3:48187084-48187103 MS.gene32234:intron 25.0%
! ACGTCAAAATATACATTAGA+GGG - chr8.3:48186016-48186035 None:intergenic 25.0%
! AGATGAAAAGGATTCTATAT+TGG + chr8.3:48185146-48185165 MS.gene32234:CDS 25.0%
! AGATGCATTATAAGAAATAC+TGG + chr8.3:48184561-48184580 MS.gene32234:intron 25.0%
! ATTCTTCTCACAATAAACAA+CGG + chr8.3:48184174-48184193 MS.gene32234:intron 25.0%
! CAAGATAGCATCATATTATT+TGG - chr8.3:48185785-48185804 None:intergenic 25.0%
! CATTAATTCAATTGAACAGA+GGG - chr8.3:48184895-48184914 None:intergenic 25.0%
! GGATATGTTTATGATGATTT+CGG + chr8.3:48185333-48185352 MS.gene32234:intron 25.0%
! TAAAACAACATTAAGTGTAC+AGG + chr8.3:48187778-48187797 MS.gene32234:CDS 25.0%
! TAATCATAAAGGACAAGTTA+TGG - chr8.3:48186291-48186310 None:intergenic 25.0%
! TACGTCAAAATATACATTAG+AGG - chr8.3:48186017-48186036 None:intergenic 25.0%
! TATAAGGAGAATATAGTAAC+TGG + chr8.3:48187138-48187157 MS.gene32234:intron 25.0%
! TATCATGGTTTATCCATATT+CGG + chr8.3:48186830-48186849 MS.gene32234:intron 25.0%
! TATTCACGTTTCAACATAAT+TGG + chr8.3:48185312-48185331 MS.gene32234:intron 25.0%
! TCATTAATTCAATTGAACAG+AGG - chr8.3:48184896-48184915 None:intergenic 25.0%
! TGAACATAAGTTTAAGAATG+TGG - chr8.3:48187085-48187104 None:intergenic 25.0%
! TGCATTCAACTTTAATAGAT+GGG + chr8.3:48185208-48185227 MS.gene32234:CDS 25.0%
! TGTTACAATGATACTAATTC+AGG + chr8.3:48184378-48184397 MS.gene32234:intron 25.0%
! TTAATAAACTTATGTGGTGA+AGG + chr8.3:48183739-48183758 MS.gene32234:intron 25.0%
! TTAATCTGATCTTGATATTG+CGG + chr8.3:48185877-48185896 MS.gene32234:intron 25.0%
! TTACCACTTTATCATATAGT+AGG - chr8.3:48184687-48184706 None:intergenic 25.0%
! TTATGCAAAATAAGAGTGAA+AGG + chr8.3:48188077-48188096 MS.gene32234:intron 25.0%
!! AACAAATATAAGGCATTTAG+CGG - chr8.3:48188043-48188062 None:intergenic 25.0%
!! CATCTAAAATACTTAACCAT+GGG - chr8.3:48184546-48184565 None:intergenic 25.0%
!! GTGTCTTTTCATATATTTCT+TGG + chr8.3:48184134-48184153 MS.gene32234:intron 25.0%
!! TATAATCTTCTGAACCATTT+TGG + chr8.3:48188294-48188313 MS.gene32234:intron 25.0%
!! TTAAGAAAAGGTCCATTTTA+AGG + chr8.3:48186360-48186379 MS.gene32234:intron 25.0%
!! TTTATGGATTGTTTAAGAGT+AGG - chr8.3:48186338-48186357 None:intergenic 25.0%
!!! AAAACTTATTTTGGAATGGA+TGG + chr8.3:48186542-48186561 MS.gene32234:intron 25.0%
!!! AATTTTTTTGTAGGCTTTCA+GGG + chr8.3:48186163-48186182 MS.gene32234:intron 25.0%
!!! ATATTTTGATTCACATGAAG+AGG + chr8.3:48184283-48184302 MS.gene32234:intron 25.0%
!!! ATTTTGAGTGTTCCTTAAAA+TGG - chr8.3:48186375-48186394 None:intergenic 25.0%
!!! CATTACAAACTGATTTTGTA+GGG - chr8.3:48187534-48187553 None:intergenic 25.0%
!!! GAAAGTATTAGAAAGAAAGT+TGG + chr8.3:48184796-48184815 MS.gene32234:intron 25.0%
!!! GTTGATTTTAATGATTAACG+AGG + chr8.3:48187196-48187215 MS.gene32234:intron 25.0%
!!! TAATTTTTTTGTAGGCTTTC+AGG + chr8.3:48186162-48186181 MS.gene32234:intron 25.0%
!!! TGCTAAAACTTATTTTGGAA+TGG + chr8.3:48186538-48186557 MS.gene32234:intron 25.0%
!!! TGTGTTACTTTTTTTGTTGT+AGG + chr8.3:48185550-48185569 MS.gene32234:intron 25.0%
!!! TTCTTCCTTATTTTAGATAG+CGG + chr8.3:48185122-48185141 MS.gene32234:intron 25.0%
AAAATAACTCTCGAGTTTAC+AGG + chr8.3:48184636-48184655 MS.gene32234:intron 30.0%
ACAATAAACAACGGTATACA+AGG + chr8.3:48184183-48184202 MS.gene32234:intron 30.0%
AGACCTACTATATGATAAAG+TGG + chr8.3:48184681-48184700 MS.gene32234:intron 30.0%
AGGTTTCAATAATTCTTGTG+TGG + chr8.3:48183812-48183831 MS.gene32234:intron 30.0%
ATAGGATTCATGTGCAATAT+AGG + chr8.3:48184608-48184627 MS.gene32234:intron 30.0%
ATATAGAAGATGCAAACCAT+AGG + chr8.3:48184590-48184609 MS.gene32234:intron 30.0%
ATGCATTGAAAGTTTACTGT+TGG + chr8.3:48186618-48186637 MS.gene32234:intron 30.0%
ATTAGAGGGAGTAACTAAAT+AGG - chr8.3:48184024-48184043 None:intergenic 30.0%
ATTTCGGTCAATTTAACTCA+GGG + chr8.3:48185349-48185368 MS.gene32234:intron 30.0%
CAAAGGCTTAAAAGATGTTA+TGG - chr8.3:48184976-48184995 None:intergenic 30.0%
CAAATTCAATAGTCAGAAGA+AGG + chr8.3:48186119-48186138 MS.gene32234:intron 30.0%
CAACCAATGGATAATCATAA+AGG - chr8.3:48186302-48186321 None:intergenic 30.0%
CATAACTGCAAATATGTAGT+TGG + chr8.3:48186580-48186599 MS.gene32234:intron 30.0%
CATTCTGATAGCTTCTATAA+TGG - chr8.3:48185627-48185646 None:intergenic 30.0%
GAAACAACGCTGTTAAATTT+GGG + chr8.3:48187498-48187517 MS.gene32234:intron 30.0%
GATATAAGCACAAGGTATAT+CGG - chr8.3:48185445-48185464 None:intergenic 30.0%
GATTAATAGGAAGTCAGTAA+TGG - chr8.3:48186944-48186963 None:intergenic 30.0%
GCATATATTGCTGTATAATG+TGG + chr8.3:48187411-48187430 MS.gene32234:intron 30.0%
GCATTATAAGAAATACTGGA+GGG + chr8.3:48184565-48184584 MS.gene32234:intron 30.0%
GGAAATTATGTGTTGCAAAT+TGG + chr8.3:48187348-48187367 MS.gene32234:intron 30.0%
GTGCATTCAACTTTAATAGA+TGG + chr8.3:48185207-48185226 MS.gene32234:CDS 30.0%
GTTGAGTTTATCATTGAGAA+AGG + chr8.3:48186195-48186214 MS.gene32234:CDS 30.0%
TAAGGCATATCTATCTAATG+TGG + chr8.3:48187586-48187605 MS.gene32234:intron 30.0%
TAATTCTCACATGGTAGTTA+TGG + chr8.3:48185600-48185619 MS.gene32234:intron 30.0%
TATATTGCACATGAATCCTA+TGG - chr8.3:48184609-48184628 None:intergenic 30.0%
TATGGCAATATACAACTTTG+AGG + chr8.3:48187254-48187273 MS.gene32234:intron 30.0%
TCAGATGCAAACTTTATGAT+GGG + chr8.3:48184738-48184757 MS.gene32234:intron 30.0%
TGAAACAACGCTGTTAAATT+TGG + chr8.3:48187497-48187516 MS.gene32234:intron 30.0%
TGCATTATAAGAAATACTGG+AGG + chr8.3:48184564-48184583 MS.gene32234:intron 30.0%
TGTCCTTTATGATTATCCAT+TGG + chr8.3:48186296-48186315 MS.gene32234:intron 30.0%
TTCAACTTTAATAGATGGGA+AGG + chr8.3:48185212-48185231 MS.gene32234:CDS 30.0%
TTTATCATTGAGAAAGGAGA+CGG + chr8.3:48186201-48186220 MS.gene32234:CDS 30.0%
! AAGGGCAATTTTCAGTTTTT+GGG + chr8.3:48188252-48188271 MS.gene32234:CDS 30.0%
! AAGGTATATCGGCTATATAT+AGG - chr8.3:48185434-48185453 None:intergenic 30.0%
! AATATCCATCTAAAACAACC+TGG - chr8.3:48186683-48186702 None:intergenic 30.0%
! AATGATATCAGCATTTTGCA+GGG + chr8.3:48185643-48185662 MS.gene32234:intron 30.0%
! ACAAATATAAGGCATTTAGC+GGG - chr8.3:48188042-48188061 None:intergenic 30.0%
! ATCTACCGCTATCTAAAATA+AGG - chr8.3:48185130-48185149 None:intergenic 30.0%
! ATTGAATTTTACCTGAATGG+TGG - chr8.3:48186268-48186287 None:intergenic 30.0%
! CAATATACAACTTTGAGGAA+TGG + chr8.3:48187259-48187278 MS.gene32234:intron 30.0%
! CATAACATCTTTTAAGCCTT+TGG + chr8.3:48184974-48184993 MS.gene32234:intron 30.0%
! GCATCTAAAATACTTAACCA+TGG - chr8.3:48184547-48184566 None:intergenic 30.0%
! GGACCTTTTCTTAATGTTTA+TGG - chr8.3:48186354-48186373 None:intergenic 30.0%
! GTTTAATATCTGAAATCCCA+TGG + chr8.3:48184527-48184546 MS.gene32234:intron 30.0%
! TCAACTTTTAAACGAAACCT+TGG + chr8.3:48187224-48187243 MS.gene32234:intron 30.0%
! TGGATTGAATTTTACCTGAA+TGG - chr8.3:48186271-48186290 None:intergenic 30.0%
! TTATTCTTTTCCTCTGTTGT+AGG + chr8.3:48188202-48188221 MS.gene32234:intron 30.0%
! TTCATTTTCATCGCTTATCA+TGG + chr8.3:48186815-48186834 MS.gene32234:intron 30.0%
! TTTCTTATCTGTCTTTTGGA+AGG + chr8.3:48187872-48187891 MS.gene32234:intron 30.0%
!! GAACGTAAAGAAAGTTTTGA+AGG + chr8.3:48184468-48184487 MS.gene32234:CDS 30.0%
!! GCATTACAAACTGATTTTGT+AGG - chr8.3:48187535-48187554 None:intergenic 30.0%
!! TACATTTCTTTTTGGAAACC+CGG - chr8.3:48184000-48184019 None:intergenic 30.0%
!!! AAACTGACATGTCATTTTGA+AGG - chr8.3:48185969-48185988 None:intergenic 30.0%
AAAACAAGTCACGAGACATA+TGG + chr8.3:48183904-48183923 MS.gene32234:intron 35.0%
AAACCTTATGGAACAATGGA+GGG + chr8.3:48184445-48184464 MS.gene32234:CDS 35.0%
AAATGAAGAGCGATATACAC+TGG - chr8.3:48186802-48186821 None:intergenic 35.0%
AAGATATTTCGTATCTGCTG+AGG + chr8.3:48184410-48184429 MS.gene32234:CDS 35.0%
AGAACAAAACACAACCTGTA+TGG - chr8.3:48183666-48183685 None:intergenic 35.0%
AGTTCTCCTTCAATCCATAA+AGG + chr8.3:48185675-48185694 MS.gene32234:CDS 35.0%
ATGAGAGCAATAAGGAAGTA+TGG + chr8.3:48187306-48187325 MS.gene32234:intron 35.0%
CAAGAATTATTGAAACCTCG+AGG - chr8.3:48183810-48183829 None:intergenic 35.0%
CAATAATTCTTGTGTGGAGT+CGG + chr8.3:48183818-48183837 MS.gene32234:intron 35.0%
CAATATCCAGTGTAGATTGA+AGG - chr8.3:48185729-48185748 None:intergenic 35.0%
CTCAGATGCAAACTTTATGA+TGG + chr8.3:48184737-48184756 MS.gene32234:intron 35.0%
CTGACTATTGAATTTGTCCA+AGG - chr8.3:48186115-48186134 None:intergenic 35.0%
GAAGTTGGAAGGAAATTGAA+AGG + chr8.3:48183870-48183889 MS.gene32234:intron 35.0%
GATTTCGGTCAATTTAACTC+AGG + chr8.3:48185348-48185367 MS.gene32234:intron 35.0%
GGGTCTGTAAAATCTTAGAA+AGG - chr8.3:48184875-48184894 None:intergenic 35.0%
TAAAGTTGAATGCACCAAAG+AGG - chr8.3:48185202-48185221 None:intergenic 35.0%
TATAAGGGATGAGAGCAATA+AGG + chr8.3:48187298-48187317 MS.gene32234:intron 35.0%
TATATTGGCAAGTATACCAG+CGG + chr8.3:48185161-48185180 MS.gene32234:CDS 35.0%
TCATTCTTAGTGCAATTCCT+TGG + chr8.3:48186095-48186114 MS.gene32234:intron 35.0%
TCGATCAAATCAACAACCAA+TGG - chr8.3:48186315-48186334 None:intergenic 35.0%
TGCAAAATAAGAGTGAAAGG+TGG + chr8.3:48188080-48188099 MS.gene32234:intron 35.0%
TGGAATCCACAAGACAAAAT+AGG + chr8.3:48184764-48184783 MS.gene32234:intron 35.0%
TTCCAATCAAGCTATTCTCT+CGG + chr8.3:48187679-48187698 MS.gene32234:CDS 35.0%
TTGGAAGGAAATTGAAAGGT+TGG + chr8.3:48183874-48183893 MS.gene32234:intron 35.0%
! AACGCTGTTAAATTTGGGTT+AGG + chr8.3:48187503-48187522 MS.gene32234:intron 35.0%
! ACTAGTCTCATGTCAAATGA+TGG - chr8.3:48186052-48186071 None:intergenic 35.0%
! AGGAGTAGTTAGTTTCTAAC+TGG + chr8.3:48184312-48184331 MS.gene32234:intron 35.0%
! ATGATATCAGCATTTTGCAG+GGG + chr8.3:48185644-48185663 MS.gene32234:intron 35.0%
! ATTTAGTTCACTCAGAGAAC+TGG - chr8.3:48186865-48186884 None:intergenic 35.0%
! CAAATATAAGGCATTTAGCG+GGG - chr8.3:48188041-48188060 None:intergenic 35.0%
! CTCATTCCTATTTTGTCTTG+TGG - chr8.3:48184773-48184792 None:intergenic 35.0%
! GAAAGTTTACTGTTGGTAGA+CGG + chr8.3:48186625-48186644 MS.gene32234:intron 35.0%
! GAAGGGCAATTTTCAGTTTT+TGG + chr8.3:48188251-48188270 MS.gene32234:CDS 35.0%
! GAATGATATCAGCATTTTGC+AGG + chr8.3:48185642-48185661 MS.gene32234:intron 35.0%
! GGAATTTTGCAAAACTGGTA+AGG + chr8.3:48186721-48186740 MS.gene32234:intron 35.0%
! TATTGCCATAGTTGTTTCCA+AGG - chr8.3:48187244-48187263 None:intergenic 35.0%
! TTAGATAGCGGTAGATGAAA+AGG + chr8.3:48185134-48185153 MS.gene32234:intron 35.0%
!! AGGTTGCTGATTCTTGAAAA+AGG + chr8.3:48185469-48185488 MS.gene32234:intron 35.0%
!! TTATCTGTCTTTTGGAAGGA+TGG + chr8.3:48187876-48187895 MS.gene32234:intron 35.0%
AAATGATATCCCTCCTAAGC+CGG - chr8.3:48188228-48188247 None:intergenic 40.0%
AACATTGGTGTGAAGTTGGA+AGG + chr8.3:48183859-48183878 MS.gene32234:intron 40.0%
AACCATGGAACTGAACTGAA+CGG - chr8.3:48183528-48183547 None:intergenic 40.0%
AACCTTATGGAACAATGGAG+GGG + chr8.3:48184446-48184465 MS.gene32234:CDS 40.0%
AAGTGGTTACAATGTTCCCT+TGG + chr8.3:48187721-48187740 MS.gene32234:CDS 40.0%
ACCACTTGTCTTATCTAGTC+CGG - chr8.3:48187708-48187727 None:intergenic 40.0%
ACCTGTGTGATATAAGCACA+AGG - chr8.3:48185453-48185472 None:intergenic 40.0%
ACCTTGTGCTTATATCACAC+AGG + chr8.3:48185449-48185468 MS.gene32234:intron 40.0%
ACTAGAGACATTACAGGTGA+TGG + chr8.3:48185756-48185775 MS.gene32234:intron 40.0%
ACTGCTCCATAAACAGATAG+AGG - chr8.3:48187918-48187937 None:intergenic 40.0%
AGCAGAACTAGAGACATTAC+AGG + chr8.3:48185750-48185769 MS.gene32234:CDS 40.0%
ATCTGAGCATCTCTGTAACA+TGG - chr8.3:48184724-48184743 None:intergenic 40.0%
ATCTGCATCCTGTTCCTTTA+TGG - chr8.3:48185692-48185711 None:intergenic 40.0%
ATGTGCAGATATACCACCAT+AGG + chr8.3:48188366-48188385 MS.gene32234:intron 40.0%
ATGTTGAAGGAAGAAGAGAG+AGG - chr8.3:48183338-48183357 None:intergenic 40.0%
ATTCAGCTCCTTTAACTGCA+GGG + chr8.3:48186700-48186719 MS.gene32234:CDS 40.0%
ATTCCACAGAGGAAACCTTA+TGG + chr8.3:48184433-48184452 MS.gene32234:CDS 40.0%
ATTCTCCCCGAGATAAAAAC+CGG + chr8.3:48188396-48188415 MS.gene32234:CDS 40.0%
CCTTCAATCCATAAAGGAAC+AGG + chr8.3:48185681-48185700 MS.gene32234:CDS 40.0%
CGAAACCTTGGAAACAACTA+TGG + chr8.3:48187236-48187255 MS.gene32234:intron 40.0%
CGCAAACATTTCAGTCAACT+AGG + chr8.3:48186984-48187003 MS.gene32234:intron 40.0%
CTGACAGTTAATTTCTTGCC+AGG + chr8.3:48186662-48186681 MS.gene32234:intron 40.0%
CTGGTAAATCAGACCGAATA+TGG - chr8.3:48186846-48186865 None:intergenic 40.0%
CTTAGGAGGGATATCATTTG+AGG + chr8.3:48188229-48188248 MS.gene32234:CDS 40.0%
GAAACCTTATGGAACAATGG+AGG + chr8.3:48184444-48184463 MS.gene32234:CDS 40.0%
GAGCGATATACACTGGATAT+TGG - chr8.3:48186795-48186814 None:intergenic 40.0%
GAGGAAACCTTATGGAACAA+TGG + chr8.3:48184441-48184460 MS.gene32234:CDS 40.0%
GAGGGATATCATTTGAGGAA+GGG + chr8.3:48188234-48188253 MS.gene32234:CDS 40.0%
GCAAAATTCCCTGCAGTTAA+AGG - chr8.3:48186711-48186730 None:intergenic 40.0%
GTGAAGCAGAATATTCGAGA+AGG - chr8.3:48183404-48183423 None:intergenic 40.0%
GTTCTGCCTCTATCTGTTTA+TGG + chr8.3:48187909-48187928 MS.gene32234:CDS 40.0%
TAAACAGATAGAGGCAGAAC+TGG - chr8.3:48187909-48187928 None:intergenic 40.0%
TATTCAGCTCCTTTAACTGC+AGG + chr8.3:48186699-48186718 MS.gene32234:CDS 40.0%
TCAACGAAAAGACACACCAA+AGG - chr8.3:48184993-48185012 None:intergenic 40.0%
TGCTTCACAAAGAGCCAATT+AGG + chr8.3:48183416-48183435 MS.gene32234:CDS 40.0%
TGTGAACCTTCAATCTACAC+TGG + chr8.3:48185720-48185739 MS.gene32234:CDS 40.0%
TGTGCAGATATACCACCATA+GGG + chr8.3:48188367-48188386 MS.gene32234:intron 40.0%
TGTTTATGGAGCAGTTGCTA+TGG + chr8.3:48187923-48187942 MS.gene32234:CDS 40.0%
TTCACATGAAGAGGACTGAT+AGG + chr8.3:48184292-48184311 MS.gene32234:intron 40.0%
TTCCGAGAGAATAGCTTGAT+TGG - chr8.3:48187684-48187703 None:intergenic 40.0%
TTCGAACTTAAGACCTTGTG+AGG - chr8.3:48183786-48183805 None:intergenic 40.0%
TTGGAACATTGGTGTGAAGT+TGG + chr8.3:48183855-48183874 MS.gene32234:intron 40.0%
! AGCGTTGTTTCAGTAGATGA+TGG - chr8.3:48187489-48187508 None:intergenic 40.0%
! ATATCCCCGGTTTTTATCTC+GGG - chr8.3:48188405-48188424 None:intergenic 40.0%
! CCTGTTCCTTTATGGATTGA+AGG - chr8.3:48185684-48185703 None:intergenic 40.0%
! GATATCCCCGGTTTTTATCT+CGG - chr8.3:48188406-48188425 None:intergenic 40.0%
! GGTTCAACATTTTCTCCAGT+TGG + chr8.3:48186222-48186241 MS.gene32234:CDS 40.0%
! TCAACATTTTCTCCAGTTGG+TGG + chr8.3:48186225-48186244 MS.gene32234:CDS 40.0%
! TGATATCAGCATTTTGCAGG+GGG + chr8.3:48185645-48185664 MS.gene32234:intron 40.0%
! TGCAGGGAATTTTGCAAAAC+TGG + chr8.3:48186716-48186735 MS.gene32234:CDS 40.0%
! TGGTCTATCTTTTCTGTTGC+CGG + chr8.3:48185911-48185930 MS.gene32234:CDS 40.0%
! TTGGCCTTCAATAAGCTTTG+CGG - chr8.3:48188436-48188455 None:intergenic 40.0%
!! AGGAAGTCAGTAATGGATTC+AGG - chr8.3:48186937-48186956 None:intergenic 40.0%
!! CATATCCTTTAGGTGATGGA+TGG + chr8.3:48187629-48187648 MS.gene32234:intron 40.0%
!! GCAAACTTTATGATGGGTCA+TGG + chr8.3:48184744-48184763 MS.gene32234:intron 40.0%
!! GTGATGGATGGAGCATATAA+TGG + chr8.3:48187641-48187660 MS.gene32234:CDS 40.0%
!!! TCTTGCCAGGTTGTTTTAGA+TGG + chr8.3:48186675-48186694 MS.gene32234:intron 40.0%
AAATCCCACCATCTACTACC+AGG - chr8.3:48183944-48183963 None:intergenic 45.0%
AACTTTCCTTCGGCAACACA+AGG - chr8.3:48188464-48188483 None:intergenic 45.0%
AAGTATACCAGCGGAACTGA+AGG + chr8.3:48185170-48185189 MS.gene32234:CDS 45.0%
AATGTTCCAACCGTCCAGTA+TGG - chr8.3:48183845-48183864 None:intergenic 45.0%
ACCTGTATGGCCTTCATGTT+AGG - chr8.3:48183653-48183672 None:intergenic 45.0%
ACGGTGGAAGCAATTAGGAT+TGG - chr8.3:48183509-48183528 None:intergenic 45.0%
ACTGAACGGTGGAAGCAATT+AGG - chr8.3:48183514-48183533 None:intergenic 45.0%
ACTGAAGGAAAAGGCCTCTT+TGG + chr8.3:48185185-48185204 MS.gene32234:CDS 45.0%
AGAAGACACGTAAGGAACCA+TGG - chr8.3:48183543-48183562 None:intergenic 45.0%
AGAGCAACTTCACCAGTTCT+AGG - chr8.3:48183608-48183627 None:intergenic 45.0%
ATACAGAATCGCATTCGCAG+CGG - chr8.3:48183567-48183586 None:intergenic 45.0%
ATACTGGACGGTTGGAACAT+TGG + chr8.3:48183844-48183863 MS.gene32234:intron 45.0%
ATGCTCCATCCATCACCTAA+AGG - chr8.3:48187637-48187656 None:intergenic 45.0%
CAAGCTATTCTCTCGGAAAC+CGG + chr8.3:48187686-48187705 MS.gene32234:CDS 45.0%
CCTGTATGGCCTTCATGTTA+GGG - chr8.3:48183652-48183671 None:intergenic 45.0%
CGTTCCGCAAAGCTTATTGA+AGG + chr8.3:48188429-48188448 MS.gene32234:CDS 45.0%
GAACTGGTGAAGTTGCTCTT+AGG + chr8.3:48183609-48183628 MS.gene32234:CDS 45.0%
GAATGCGATTCTGTATTCGC+CGG + chr8.3:48183571-48183590 MS.gene32234:CDS 45.0%
GACACAAAGGTTCCTAGAAC+TGG + chr8.3:48183593-48183612 MS.gene32234:CDS 45.0%
GAGAAAAACTGCCACCATTC+AGG + chr8.3:48186254-48186273 MS.gene32234:CDS 45.0%
GAGAATATCTCTCCCTATGG+TGG - chr8.3:48188382-48188401 None:intergenic 45.0%
GATCTTGATATTGCGGCAAC+AGG + chr8.3:48185884-48185903 MS.gene32234:intron 45.0%
GGAGGGATATCATTTGAGGA+AGG + chr8.3:48188233-48188252 MS.gene32234:CDS 45.0%
GGCAACAGAAAAGATAGACC+AGG - chr8.3:48185912-48185931 None:intergenic 45.0%
GGCAATACACGGAATATCCA+CGG + chr8.3:48185934-48185953 MS.gene32234:CDS 45.0%
GTCTTAAGTTCGAATCCTCG+AGG + chr8.3:48183792-48183811 MS.gene32234:intron 45.0%
GTTCCATAAGGTTTCCTCTG+TGG - chr8.3:48184439-48184458 None:intergenic 45.0%
TGACGCGTCGTATTCATACA+AGG + chr8.3:48185079-48185098 MS.gene32234:intron 45.0%
TTAGACCTCCTGGTAGTAGA+TGG + chr8.3:48183933-48183952 MS.gene32234:intron 45.0%
TTCCCCTCCATTGTTCCATA+AGG - chr8.3:48184451-48184470 None:intergenic 45.0%
TTCGAGAAGGTGACTTTGTG+TGG - chr8.3:48183391-48183410 None:intergenic 45.0%
TTCTCCCCGAGATAAAAACC+GGG + chr8.3:48188397-48188416 MS.gene32234:CDS 45.0%
TTTCTCTCTTCTCCACCAAC+TGG - chr8.3:48186240-48186259 None:intergenic 45.0%
! AAGGCATTTAGCGGGGAAAT+AGG - chr8.3:48188034-48188053 None:intergenic 45.0%
! ACCGGACTAGATAAGACAAG+TGG + chr8.3:48187704-48187723 MS.gene32234:CDS 45.0%
! ACTTTGTGTGGCGGAAGAAA+GGG - chr8.3:48183379-48183398 None:intergenic 45.0%
! CATCGTCACATTGGCCTAAT+TGG - chr8.3:48183433-48183452 None:intergenic 45.0%
! CGTCAGTTGGTATAACTCTG+AGG + chr8.3:48183456-48183475 MS.gene32234:CDS 45.0%
! GATATCAGCATTTTGCAGGG+GGG + chr8.3:48185646-48185665 MS.gene32234:intron 45.0%
! GGTCTATCTTTTCTGTTGCC+GGG + chr8.3:48185912-48185931 MS.gene32234:CDS 45.0%
! GTCTATCTTTTCTGTTGCCG+GGG + chr8.3:48185913-48185932 MS.gene32234:CDS 45.0%
! TATCCCCGGTTTTTATCTCG+GGG - chr8.3:48188404-48188423 None:intergenic 45.0%
! TCTTTTCCTCTGTTGTAGGC+CGG + chr8.3:48188206-48188225 MS.gene32234:intron 45.0%
! TTTTGTAGGCTTTCAGGGAG+AGG + chr8.3:48186168-48186187 MS.gene32234:intron 45.0%
!! ATGGCTCTAATTAGACCTCC+TGG + chr8.3:48183923-48183942 MS.gene32234:intron 45.0%
!! GGAAGTATGGTTTTCAGCTG+TGG + chr8.3:48187319-48187338 MS.gene32234:intron 45.0%
!! GTTCTAGGAACCTTTGTGTC+CGG - chr8.3:48183593-48183612 None:intergenic 45.0%
!! TGGTAGTAGATGGTGGGATT+TGG + chr8.3:48183943-48183962 MS.gene32234:intron 45.0%
AAGGGGCTCAAATTGTCCAG+CGG - chr8.3:48187756-48187775 None:intergenic 50.0%
ACCAGCGGAACTGAAGGAAA+AGG + chr8.3:48185176-48185195 MS.gene32234:CDS 50.0%
ACCTCCTGGTAGTAGATGGT+GGG + chr8.3:48183937-48183956 MS.gene32234:intron 50.0%
ATCTGCTGAGGATTCCACAG+AGG + chr8.3:48184422-48184441 MS.gene32234:CDS 50.0%
CACCGTTCAGTTCAGTTCCA+TGG + chr8.3:48183523-48183542 MS.gene32234:CDS 50.0%
CATGGAACTGAACTGAACGG+TGG - chr8.3:48183525-48183544 None:intergenic 50.0%
CCAGCGGGCATTATTTCCAA+GGG - chr8.3:48187740-48187759 None:intergenic 50.0%
CCCTAACATGAAGGCCATAC+AGG + chr8.3:48183649-48183668 MS.gene32234:CDS 50.0%
CCTTCATGTTAGGGCTTGCA+GGG - chr8.3:48183643-48183662 None:intergenic 50.0%
CTGACGTGTCATCGTCACAT+TGG - chr8.3:48183442-48183461 None:intergenic 50.0%
GAGAAGGTGACTTTGTGTGG+CGG - chr8.3:48183388-48183407 None:intergenic 50.0%
GCATTTAGCGGGGAAATAGG+TGG - chr8.3:48188031-48188050 None:intergenic 50.0%
GCGAGTGATCGGAATGTTGA+AGG - chr8.3:48183351-48183370 None:intergenic 50.0%
GGATATTCCGTGTATTGCCC+CGG - chr8.3:48185933-48185952 None:intergenic 50.0%
GGCTCATAACGAAGCTTCTG+AGG + chr8.3:48187944-48187963 MS.gene32234:CDS 50.0%
GGGGAGAATATCTCTCCCTA+TGG - chr8.3:48188385-48188404 None:intergenic 50.0%
TACAGAATCGCATTCGCAGC+GGG - chr8.3:48183566-48183585 None:intergenic 50.0%
TCCAGCGGGCATTATTTCCA+AGG - chr8.3:48187741-48187760 None:intergenic 50.0%
TCTCCCCGAGATAAAAACCG+GGG + chr8.3:48188398-48188417 MS.gene32234:CDS 50.0%
TCTGTATTCGCCGGACACAA+AGG + chr8.3:48183580-48183599 MS.gene32234:CDS 50.0%
TGCGGAACGAATGATATCCC+CGG - chr8.3:48188418-48188437 None:intergenic 50.0%
TGTGACGATGACACGTCAGT+TGG + chr8.3:48183443-48183462 MS.gene32234:CDS 50.0%
TTTCCTTCGGCAACACAAGG+CGG - chr8.3:48188461-48188480 None:intergenic 50.0%
TTTGAAGGAGTCACTGACCG+TGG - chr8.3:48185954-48185973 None:intergenic 50.0%
! GACTTTGTGTGGCGGAAGAA+AGG - chr8.3:48183380-48183399 None:intergenic 50.0%
! GGTTTTCAGCTGTGGAAGAC+TGG + chr8.3:48187327-48187346 MS.gene32234:intron 50.0%
!! CTTTTTGGAAACCCGGTAGC+CGG - chr8.3:48183993-48184012 None:intergenic 50.0%
!! TCCCCGGATTAGTCAGTCTT+GGG + chr8.3:48183967-48183986 MS.gene32234:intron 50.0%
!! TTCCCCGGATTAGTCAGTCT+TGG + chr8.3:48183966-48183985 MS.gene32234:intron 50.0%
AGGGGCTCAAATTGTCCAGC+GGG - chr8.3:48187755-48187774 None:intergenic 55.0%
ATATTGCGGCAACAGGCACC+TGG + chr8.3:48185891-48185910 MS.gene32234:intron 55.0%
CCCTGCAAGCCCTAACATGA+AGG + chr8.3:48183640-48183659 MS.gene32234:CDS 55.0%
CCCTTGGAAATAATGCCCGC+TGG + chr8.3:48187737-48187756 MS.gene32234:CDS 55.0%
CGGCCCAAGACTGACTAATC+CGG - chr8.3:48183973-48183992 None:intergenic 55.0%
GACCTCCTGGTAGTAGATGG+TGG + chr8.3:48183936-48183955 MS.gene32234:intron 55.0%
GCCCAAGACTGACTAATCCG+GGG - chr8.3:48183971-48183990 None:intergenic 55.0%
GCCTTCATGTTAGGGCTTGC+AGG - chr8.3:48183644-48183663 None:intergenic 55.0%
GGCCCAAGACTGACTAATCC+GGG - chr8.3:48183972-48183991 None:intergenic 55.0%
GTGGTGAAGGCTTGAGACCT+AGG + chr8.3:48183752-48183771 MS.gene32234:intron 55.0%
TCCCACCATCTACTACCAGG+AGG - chr8.3:48183941-48183960 None:intergenic 55.0%
TCTGTTGCCGGGGCAATACA+CGG + chr8.3:48185923-48185942 MS.gene32234:CDS 55.0%
TGGAGTCGGTCCATACTGGA+CGG + chr8.3:48183832-48183851 MS.gene32234:intron 55.0%
TGTGTGGAGTCGGTCCATAC+TGG + chr8.3:48183828-48183847 MS.gene32234:intron 55.0%
! AAAGGGTGGTGGCGAGTGAT+CGG - chr8.3:48183362-48183381 None:intergenic 55.0%
! CTAGGAGTGTGCTCCTCACA+AGG + chr8.3:48183770-48183789 MS.gene32234:intron 55.0%
! CTTGTGAGGAGCACACTCCT+AGG - chr8.3:48183772-48183791 None:intergenic 55.0%
! GCCTTTTCCTTCAGTTCCGC+TGG - chr8.3:48185180-48185199 None:intergenic 55.0%
! TGTTGTAGGCCGGCTTAGGA+GGG + chr8.3:48188216-48188235 MS.gene32234:intron 55.0%
! TTGTGTGGCGGAAGAAAGGG+TGG - chr8.3:48183376-48183395 None:intergenic 55.0%
!! CGGATTAGTCAGTCTTGGGC+CGG + chr8.3:48183971-48183990 MS.gene32234:intron 55.0%
!! GATGGTGGGATTTGGTTCCC+CGG + chr8.3:48183951-48183970 MS.gene32234:intron 55.0%
AGACCGCCTTGTGTTGCCGA+AGG + chr8.3:48188455-48188474 MS.gene32234:CDS 60.0%
CCTAAGCCGGCCTACAACAG+AGG - chr8.3:48188215-48188234 None:intergenic 60.0%
GCAGCGGGAGAAGACACGTA+AGG - chr8.3:48183551-48183570 None:intergenic 60.0%
GTCGGTCCATACTGGACGGT+TGG + chr8.3:48183836-48183855 MS.gene32234:intron 60.0%
TCGGCAACACAAGGCGGTCT+TGG - chr8.3:48188455-48188474 None:intergenic 60.0%
! CCTCTGTTGTAGGCCGGCTT+AGG + chr8.3:48188212-48188231 MS.gene32234:intron 60.0%
! CTGTTGTAGGCCGGCTTAGG+AGG + chr8.3:48188215-48188234 MS.gene32234:intron 60.0%
! TGTGGCGGAAGAAAGGGTGG+TGG - chr8.3:48183373-48183392 None:intergenic 60.0%
GTCAGTCTTGGGCCGGCTAC+CGG + chr8.3:48183978-48183997 MS.gene32234:intron 65.0%
TCAGTCTTGGGCCGGCTACC+GGG + chr8.3:48183979-48183998 MS.gene32234:intron 65.0%


Chromosome Type Strat End Strand Name
chr8.3 gene 48183326 48188485 48183326 ID=MS.gene32234
chr8.3 mRNA 48183326 48188485 48183326 ID=MS.gene32234.t1;Parent=MS.gene32234
chr8.3 exon 48183326 48183670 48183326 ID=MS.gene32234.t1.exon1;Parent=MS.gene32234.t1
chr8.3 CDS 48183326 48183670 48183326 ID=cds.MS.gene32234.t1;Parent=MS.gene32234.t1
chr8.3 exon 48184400 48184489 48184400 ID=MS.gene32234.t1.exon2;Parent=MS.gene32234.t1
chr8.3 CDS 48184400 48184489 48184400 ID=cds.MS.gene32234.t1;Parent=MS.gene32234.t1
chr8.3 exon 48185138 48185233 48185138 ID=MS.gene32234.t1.exon3;Parent=MS.gene32234.t1
chr8.3 CDS 48185138 48185233 48185138 ID=cds.MS.gene32234.t1;Parent=MS.gene32234.t1
chr8.3 exon 48185664 48185771 48185664 ID=MS.gene32234.t1.exon4;Parent=MS.gene32234.t1
chr8.3 CDS 48185664 48185771 48185664 ID=cds.MS.gene32234.t1;Parent=MS.gene32234.t1
chr8.3 exon 48185906 48185955 48185906 ID=MS.gene32234.t1.exon5;Parent=MS.gene32234.t1
chr8.3 CDS 48185906 48185955 48185906 ID=cds.MS.gene32234.t1;Parent=MS.gene32234.t1
chr8.3 exon 48186176 48186275 48186176 ID=MS.gene32234.t1.exon6;Parent=MS.gene32234.t1
chr8.3 CDS 48186176 48186275 48186176 ID=cds.MS.gene32234.t1;Parent=MS.gene32234.t1
chr8.3 exon 48186684 48186737 48186684 ID=MS.gene32234.t1.exon7;Parent=MS.gene32234.t1
chr8.3 CDS 48186684 48186737 48186684 ID=cds.MS.gene32234.t1;Parent=MS.gene32234.t1
chr8.3 exon 48187641 48187799 48187641 ID=MS.gene32234.t1.exon8;Parent=MS.gene32234.t1
chr8.3 CDS 48187641 48187799 48187641 ID=cds.MS.gene32234.t1;Parent=MS.gene32234.t1
chr8.3 exon 48187894 48188016 48187894 ID=MS.gene32234.t1.exon9;Parent=MS.gene32234.t1
chr8.3 CDS 48187894 48188016 48187894 ID=cds.MS.gene32234.t1;Parent=MS.gene32234.t1
chr8.3 exon 48188224 48188273 48188224 ID=MS.gene32234.t1.exon10;Parent=MS.gene32234.t1
chr8.3 CDS 48188224 48188273 48188224 ID=cds.MS.gene32234.t1;Parent=MS.gene32234.t1
chr8.3 exon 48188374 48188485 48188374 ID=MS.gene32234.t1.exon11;Parent=MS.gene32234.t1
chr8.3 CDS 48188374 48188485 48188374 ID=cds.MS.gene32234.t1;Parent=MS.gene32234.t1
Gene Sequence

>MS.gene32234

ATGGCGTATCCTCTCTCTTCTTCCTTCAACATTCCGATCACTCGCCACCACCCTTTCTTCCGCCACACAAAGTCACCTTCTCGAATATTCTGCTTCACAAAGAGCCAATTAGGCCAATGTGACGATGACACGTCAGTTGGTATAACTCTGAGGATAATGAAGCAATTGAAGAGTGTGATTCCAATCCTAATTGCTTCCACCGTTCAGTTCAGTTCCATGGTTCCTTACGTGTCTTCTCCCGCTGCGAATGCGATTCTGTATTCGCCGGACACAAAGGTTCCTAGAACTGGTGAAGTTGCTCTTAGGAGAGCTATCCCTGCAAGCCCTAACATGAAGGCCATACAGGTTGTGTTTTGTTCTATAATGCATATCTTATTTTGATTTATTTGTTATGTACAAGGCAATTAAATATTTTAATAAACTTATGTGGTGAAGGCTTGAGACCTAGGAGTGTGCTCCTCACAAGGTCTTAAGTTCGAATCCTCGAGGTTTCAATAATTCTTGTGTGGAGTCGGTCCATACTGGACGGTTGGAACATTGGTGTGAAGTTGGAAGGAAATTGAAAGGTTGGAAGATTAAAAACAAGTCACGAGACATATGGCTCTAATTAGACCTCCTGGTAGTAGATGGTGGGATTTGGTTCCCCGGATTAGTCAGTCTTGGGCCGGCTACCGGGTTTCCAAAAAGAAATGTAACCTATTTAGTTACTCCCTCTAATCTAAAAATTTTCAAGATCAAAGAAATGCATTGAAATAGTTAATTGTAAATTGGTAGTACAATTTTGAATTTATTCTAAAAATAGCCTTTGGTGTCTTTTCATATATTTCTTGGATAAGAAATGAGTGAGAATTCTTCTCACAATAAACAACGGTATACAAGGAATTGAATATTATTAATAATGTTGAAAATGATCAAATGGAGTAGTTTGTTATATATATATAAGAACCAAAATTTGCAATATTTTGATTCACATGAAGAGGACTGATAGGAGTAGTTAGTTTCTAACTGGTCTATACATAACTAACTATTTTTTTATAGAAACTAATAAGTTGTGTTACAATGATACTAATTCAGGAGACTCTTGAAGATATTTCGTATCTGCTGAGGATTCCACAGAGGAAACCTTATGGAACAATGGAGGGGAACGTAAAGAAAGTTTTGAAGGTAATCATAATTTTTTTCTTCTCGTGTATTTATAATAGTTTAATATCTGAAATCCCATGGTTAAGTATTTTAGATGCATTATAAGAAATACTGGAGGGAAATATAGAAGATGCAAACCATAGGATTCATGTGCAATATAGGAAAAAAAAATAACTCTCGAGTTTACAGGTAAATTTTAAAGCACTGTTGTAAGACCTACTATATGATAAAGTGGTAAAAAGAAAGTAAGATCCATGTTACAGAGATGCTCAGATGCAAACTTTATGATGGGTCATGGAATCCACAAGACAAAATAGGAATGAGAATGAAAGTATTAGAAAGAAAGTTGGGATAATACTTGTTGTATAGTAGATGAAAAATCACTGATTATTAGGTGTTATTTCCTTTCTAAGATTTTACAGACCCTCTGTTCAATTGAATTAATGAAACAGTTTCAATTATTTAAATTTTGTACATGTGCAAACTTTGTGATTTTTTGAGCTTCCATAACATCTTTTAAGCCTTTGGTGTGTCTTTTCGTTGATAGAAAGATATACGATTGCAACTAAAATACTTTAAACTTCACAATTTACATGTAAAACTTAAGTCTTGACGCGTCGTATTCATACAAGGACTTCAATATTTTGATCAGTTTCTTCCTTATTTTAGATAGCGGTAGATGAAAAGGATTCTATATTGGCAAGTATACCAGCGGAACTGAAGGAAAAGGCCTCTTTGGTGCATTCAACTTTAATAGATGGGAAGGTATTTTAGAAAAAATGAACCTCGATTATTTGATTAATTGTATATCAAGTGCTGACACCTTCTTTCTAACAGAAAAAATATTCACGTTTCAACATAATTGGATATGTTTATGATGATTTCGGTCAATTTAACTCAGGGCTATACATGCATTGATAGTTCTCGTACAATATAGCGATATTTTTCTATTGTTTACTTTTCCTATATATAGCCGATATACCTTGTGCTTATATCACACAGGTTGCTGATTCTTGAAAAAGGATTCAGATGAAGAAACTTGAGTGTGAAACTTAGTTATTTTCACTTTATTTCAGATCATTGTGTTACTTTTTTTGTTGTAGGATGAAATCTTTGACAATGTTTGTTATATAATTCTCACATGGTAGTTATGGTCCATTATAGAAGCTATCAGAATGATATCAGCATTTTGCAGGGGGGTTTGCAAGTTCTCCTTCAATCCATAAAGGAACAGGATGCAGATAAAGTATCTGTGAACCTTCAATCTACACTGGATATTGTAGCAGAACTAGAGACATTACAGGTGATGGAAACCAAATAATATGATGCTATCTTGAAATCAAGAGTCAATTTTGTTTTCCAATTAAAATGACTGAATCAATGTAACACTTATATTATGGACATGTACTTAATCTGATCTTGATATTGCGGCAACAGGCACCTGGTCTATCTTTTCTGTTGCCGGGGCAATACACGGAATATCCACGGTCAGTGACTCCTTCAAAATGACATGTCAGTTTACTACATTGATGTAGTTTAAACATCCCTCTAATGTATATTTTGACGTATTTCACATGTATCCATCATTTGACATGAGACTAGTATAAAAAATCATTGTATCTTTAATCATTCTTAGTGCAATTCCTTGGACAAATTCAATAGTCAGAAGAAGGGAGAAAAATCAACATCTTCATAATTTTTTTGTAGGCTTTCAGGGAGAGGAACTGTTGAGTTTATCATTGAGAAAGGAGACGGTTCAACATTTTCTCCAGTTGGTGGAGAAGAGAGAAAAACTGCCACCATTCAGGTAAAATTCAATCCATAACTTGTCCTTTATGATTATCCATTGGTTGTTGATTTGATCGACCTACTCTTAAACAATCCATAAACATTAAGAAAAGGTCCATTTTAAGGAACACTCAAAATAAGTATTAACAATTTTCATAAATGCATTGACGGTTGTAAATGACTTGAAAATGACGAACACAATATTTATTTTGAGATAAGCTTGGAATAAATTAATTAATGTTACATTGAAATAGTAAAACGCATTTTGAACAAAATTTCTTTGCTAAAACTTATTTTGGAATGGATGGAGTATAACATAAATACATAACTGCAAATATGTAGTTGGCTGAAATACTGAATTATGCATTGAAAGTTTACTGTTGGTAGACGGTATATTGAAACTAACTGACAGTTAATTTCTTGCCAGGTTGTTTTAGATGGATATTCAGCTCCTTTAACTGCAGGGAATTTTGCAAAACTGGTAAGGTAGTGCAACTGTGCTTCAGCTTTGTGAATTCAGTTTGTCTATTATTTGCCAATATCCAGTGTATATCGCTCTTCATTTTCATCGCTTATCATGGTTTATCCATATTCGGTCTGATTTACCAGTTCTCTGAGTGAACTAAATCAGTGATGTTCATTTTTTTACTTGAATGGTTTATTATCTATTTCTAATGCCTGAATCCATTACTGACTTCCTATTAATCATGAACTTTTTATGTATCATCGCAAACATTTCAGTCAACTAGGTTTATTTTTTTTCAATTAAAAATTACTTGTTTTGCTTTTGGGATGATAGTTTGAATAGAGAATAAAGAATGGCTTCCACATTCTTAAACTTATGTTCAGGATCTTGTGTATGCAGCGTGATAAAATTTTTGTATAAGGAGAATATAGTAACTGGAATACCTATATTTTCTACTTGAAATTTAATGTAAAGTTGATTTTAATGATTAACGAGGAAGAGTCAACTTTTAAACGAAACCTTGGAAACAACTATGGCAATATACAACTTTGAGGAATGGTTTAATGTGAAACTAATATAAGGGATGAGAGCAATAAGGAAGTATGGTTTTCAGCTGTGGAAGACTGGAAATTATGTGTTGCAAATTGGAATATTTTGTTTCTTCGTCAGAATATCTATTTTTGAATGTGCATATATTGCTGTATAATGTGGTATTTTTCATGTTTCTAGATTTTGTTTTAAGCATCTAGATAATTTGATTTTACCATCATCTACTGAAACAACGCTGTTAAATTTGGGTTAGGCTGAACCCTACAAAATCAGTTTGTAATGCGAGAGATGCTTTCCACTTACAAATACATTTTTAAGGCATATCTATCTAATGTGGTCTCTCAACACACTCAGTCACATATCCTTTAGGTGATGGATGGAGCATATAATGGCATAAAACTCAACTGTTCCAATCAAGCTATTCTCTCGGAAACCGGACTAGATAAGACAAGTGGTTACAATGTTCCCTTGGAAATAATGCCCGCTGGACAATTTGAGCCCCTTTATAAAACAACATTAAGTGTACAGGTATGTTTTCGTTTCAGTTTATCACATTTTTTGCAGCACACTTGACAGAGTAATAATCATGTTCTCATTTATTTTCTTATCTGTCTTTTGGAAGGATGGAGAACTGCCAGTTCTGCCTCTATCTGTTTATGGAGCAGTTGCTATGGCTCATAACGAAGCTTCTGAGGAGTATTCATCACCTTATCAATTTTTCTTCTATCTCTATGATAAAAGAAATGTAAGGGCAAGCCACCTATTTCCCCGCTAAATGCCTTATATTTGTTTTCTTAAAATTTTGTTATGCAAAATAAGAGTGAAAGGTGGACGCAGAATTTGAATGAGTGATGTTTCATGTTTTTAAAAACTAGAATGGGTCCTTTGTTTTTTCTTTTCAATTGTTGAAGCCTAATTAGTAATCTTTTTTTATTCTTTTCCTCTGTTGTAGGCCGGCTTAGGAGGGATATCATTTGAGGAAGGGCAATTTTCAGTTTTTGGGTAAGTTATGTTACTATTCATATAATCTTCTGAACCATTTTGGAGTTTAACTTTTTTCTCTTTTCTCTTTTTTGTTTTTATTTTGGGGTGCTATGTGCAGATATACCACCATAGGGAGAGATATTCTCCCCGAGATAAAAACCGGGGATATCATTCGTTCCGCAAAGCTTATTGAAGGCCAAGACCGCCTTGTGTTGCCGAAGGAAAGTTGA

Protein sequence

>MS.gene32234.t1

MAYPLSSSFNIPITRHHPFFRHTKSPSRIFCFTKSQLGQCDDDTSVGITLRIMKQLKSVIPILIASTVQFSSMVPYVSSPAANAILYSPDTKVPRTGEVALRRAIPASPNMKAIQETLEDISYLLRIPQRKPYGTMEGNVKKVLKIAVDEKDSILASIPAELKEKASLVHSTLIDGKGGLQVLLQSIKEQDADKVSVNLQSTLDIVAELETLQAPGLSFLLPGQYTEYPRLSGRGTVEFIIEKGDGSTFSPVGGEERKTATIQVVLDGYSAPLTAGNFAKLVMDGAYNGIKLNCSNQAILSETGLDKTSGYNVPLEIMPAGQFEPLYKTTLSVQDGELPVLPLSVYGAVAMAHNEASEEYSSPYQFFFYLYDKRNAGLGGISFEEGQFSVFGYTTIGRDILPEIKTGDIIRSAKLIEGQDRLVLPKES