Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061977.t1 | XP_003618948.2 | 100 | 151 | 0 | 0 | 1 | 151 | 1 | 151 | 1.50E-81 | 312 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061977.t1 | O49044 | 78.1 | 155 | 25 | 1 | 6 | 151 | 2 | 156 | 1.1e-64 | 247.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061977.t1 | G7KPK9 | 100.0 | 151 | 0 | 0 | 1 | 151 | 1 | 151 | 1.1e-81 | 312.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049346 | MS.gene061977 | 0.800271 | 1.56E-48 | -1.69E-46 |
| MS.gene049599 | MS.gene061977 | -0.834102 | 3.64E-56 | -1.69E-46 |
| MS.gene049758 | MS.gene061977 | 0.869656 | 2.63E-66 | -1.69E-46 |
| MS.gene049910 | MS.gene061977 | 0.813137 | 2.98E-51 | -1.69E-46 |
| MS.gene050128 | MS.gene061977 | 0.817031 | 4.07E-52 | -1.69E-46 |
| MS.gene050226 | MS.gene061977 | 0.800489 | 1.41E-48 | -1.69E-46 |
| MS.gene050227 | MS.gene061977 | 0.806161 | 9.41E-50 | -1.69E-46 |
| MS.gene050228 | MS.gene061977 | 0.802803 | 4.72E-49 | -1.69E-46 |
| MS.gene050301 | MS.gene061977 | 0.839214 | 1.81E-57 | -1.69E-46 |
| MS.gene050762 | MS.gene061977 | 0.809838 | 1.55E-50 | -1.69E-46 |
| MS.gene050763 | MS.gene061977 | 0.811877 | 5.62E-51 | -1.69E-46 |
| MS.gene05119 | MS.gene061977 | -0.847355 | 1.22E-59 | -1.69E-46 |
| MS.gene051471 | MS.gene061977 | 0.800749 | 1.25E-48 | -1.69E-46 |
| MS.gene051662 | MS.gene061977 | 0.817929 | 2.56E-52 | -1.69E-46 |
| MS.gene051663 | MS.gene061977 | 0.80817 | 3.53E-50 | -1.69E-46 |
| MS.gene051860 | MS.gene061977 | 0.808062 | 3.72E-50 | -1.69E-46 |
| MS.gene052178 | MS.gene061977 | 0.81442 | 1.55E-51 | -1.69E-46 |
| MS.gene053073 | MS.gene061977 | 0.800491 | 1.41E-48 | -1.69E-46 |
| MS.gene053836 | MS.gene061977 | 0.860309 | 2.26E-63 | -1.69E-46 |
| MS.gene054379 | MS.gene061977 | 0.831067 | 2.06E-55 | -1.69E-46 |
| MS.gene054473 | MS.gene061977 | 0.837991 | 3.75E-57 | -1.69E-46 |
| MS.gene054542 | MS.gene061977 | 0.804423 | 2.18E-49 | -1.69E-46 |
| MS.gene054930 | MS.gene061977 | 0.843065 | 1.76E-58 | -1.69E-46 |
| MS.gene055277 | MS.gene061977 | 0.829502 | 4.97E-55 | -1.69E-46 |
| MS.gene055390 | MS.gene061977 | 0.807728 | 4.39E-50 | -1.69E-46 |
| MS.gene055422 | MS.gene061977 | 0.830797 | 2.40E-55 | -1.69E-46 |
| MS.gene055428 | MS.gene061977 | 0.816932 | 4.29E-52 | -1.69E-46 |
| MS.gene056069 | MS.gene061977 | -0.843029 | 1.80E-58 | -1.69E-46 |
| MS.gene056314 | MS.gene061977 | 0.820242 | 7.61E-53 | -1.69E-46 |
| MS.gene057121 | MS.gene061977 | 0.804973 | 1.67E-49 | -1.69E-46 |
| MS.gene057245 | MS.gene061977 | 0.807536 | 4.82E-50 | -1.69E-46 |
| MS.gene05811 | MS.gene061977 | 0.812834 | 3.47E-51 | -1.69E-46 |
| MS.gene058182 | MS.gene061977 | 0.804466 | 2.13E-49 | -1.69E-46 |
| MS.gene058845 | MS.gene061977 | 0.821807 | 3.32E-53 | -1.69E-46 |
| MS.gene059518 | MS.gene061977 | 0.820757 | 5.79E-53 | -1.69E-46 |
| MS.gene059692 | MS.gene061977 | 0.807267 | 5.49E-50 | -1.69E-46 |
| MS.gene059695 | MS.gene061977 | 0.800479 | 1.41E-48 | -1.69E-46 |
| MS.gene05984 | MS.gene061977 | 0.825025 | 5.87E-54 | -1.69E-46 |
| MS.gene059894 | MS.gene061977 | 0.83914 | 1.89E-57 | -1.69E-46 |
| MS.gene06037 | MS.gene061977 | 0.814931 | 1.20E-51 | -1.69E-46 |
| MS.gene060476 | MS.gene061977 | 0.834712 | 2.56E-56 | -1.69E-46 |
| MS.gene061049 | MS.gene061977 | 0.84474 | 6.27E-59 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061977.t1 | MTR_6g029200 | 100.000 | 151 | 0 | 0 | 1 | 151 | 1 | 151 | 4.11e-105 | 296 |
| MS.gene061977.t1 | MTR_6g029200 | 93.789 | 161 | 0 | 1 | 1 | 151 | 1 | 161 | 1.24e-101 | 288 |
| MS.gene061977.t1 | MTR_7g114240 | 68.000 | 150 | 39 | 1 | 8 | 148 | 2 | 151 | 1.54e-65 | 196 |
| MS.gene061977.t1 | MTR_4g057240 | 61.111 | 144 | 53 | 1 | 4 | 147 | 63 | 203 | 4.70e-56 | 174 |
| MS.gene061977.t1 | MTR_7g114240 | 49.606 | 127 | 52 | 2 | 8 | 122 | 2 | 128 | 1.80e-34 | 117 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061977.t1 | AT5G18100 | 71.698 | 159 | 36 | 1 | 1 | 150 | 1 | 159 | 3.84e-76 | 224 |
| MS.gene061977.t1 | AT1G08830 | 65.772 | 149 | 42 | 1 | 9 | 148 | 3 | 151 | 2.97e-61 | 186 |
| MS.gene061977.t1 | AT1G08830 | 65.772 | 149 | 42 | 1 | 9 | 148 | 3 | 151 | 2.97e-61 | 186 |
| MS.gene061977.t1 | AT5G18100 | 69.403 | 134 | 32 | 1 | 1 | 125 | 1 | 134 | 4.69e-60 | 182 |
| MS.gene061977.t1 | AT2G28190 | 60.811 | 148 | 49 | 1 | 9 | 147 | 66 | 213 | 1.94e-54 | 171 |
| MS.gene061977.t1 | AT1G12520 | 35.922 | 103 | 58 | 2 | 19 | 121 | 45 | 139 | 2.80e-11 | 58.9 |
| MS.gene061977.t1 | AT1G12520 | 35.922 | 103 | 58 | 2 | 19 | 121 | 90 | 184 | 4.21e-11 | 59.3 |
| MS.gene061977.t1 | AT1G12520 | 35.922 | 103 | 58 | 2 | 19 | 121 | 181 | 275 | 9.98e-11 | 58.9 |
Find 49 sgRNAs with CRISPR-Local
Find 286 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGACTCCAGTCATCTGTTT+AGG | 0.338377 | 6.2:+20636470 | MS.gene061977:CDS |
| AACGACAGCCCTCCCGAGTA+TGG | 0.340461 | 6.2:-20634207 | None:intergenic |
| GGGAATTATACACATGTAAC+TGG | 0.341579 | 6.2:+20633297 | MS.gene061977:intron |
| GATTTGGGTAACATTGTTGC+AGG | 0.348387 | 6.2:+20633673 | MS.gene061977:CDS |
| GGGTTGTCTCCAGGTCTTCA+TGG | 0.372926 | 6.2:+20633330 | MS.gene061977:CDS |
| GAGCGACATGCCGGTGATTT+GGG | 0.381125 | 6.2:+20633658 | MS.gene061977:CDS |
| TGAGCGACATGCCGGTGATT+TGG | 0.389627 | 6.2:+20633657 | MS.gene061977:CDS |
| AATTGCTGACCAGGTATCAT+TGG | 0.425969 | 6.2:+20636450 | MS.gene061977:intron |
| ATCGGAGATAACAACGTTAG+AGG | 0.441505 | 6.2:+20631969 | MS.gene061977:CDS |
| TTACCTCTTCCAAGATCATC+AGG | 0.453273 | 6.2:-20634242 | None:intergenic |
| CATGCTGATCCTGATGATCT+TGG | 0.465371 | 6.2:+20634233 | MS.gene061977:CDS |
| GGATTTCATATCCATGCTCT+TGG | 0.477680 | 6.2:+20633351 | MS.gene061977:CDS |
| TATGAGATGGAAGGTGGAAA+GGG | 0.492874 | 6.2:+20631921 | None:intergenic |
| AACATGTAGATTCCGCTAAG+TGG | 0.498010 | 6.2:+20634176 | MS.gene061977:intron |
| ACCAATGGCTGCAACTCCAC+TGG | 0.499697 | 6.2:+20633381 | MS.gene061977:CDS |
| ACCGGCATGTCGCTCATCAT+CGG | 0.503149 | 6.2:-20633650 | None:intergenic |
| ACCAGTGGAGTTGCAGCCAT+TGG | 0.511673 | 6.2:-20633382 | None:intergenic |
| GTATGAGATGGAAGGTGGAA+AGG | 0.513322 | 6.2:+20631920 | None:intergenic |
| AACATTGTTGCAGGCCCTGA+TGG | 0.520070 | 6.2:+20633682 | MS.gene061977:CDS |
| GGTGGAAAGGGAACAGTGAA+AGG | 0.528789 | 6.2:+20631933 | MS.gene061977:CDS |
| AGAGTGTATGAGATGGAAGG+TGG | 0.531556 | 6.2:+20631915 | None:intergenic |
| AAAATAACAGGGTTGTCTCC+AGG | 0.534858 | 6.2:+20633321 | MS.gene061977:CDS |
| AGTGGAGTTCATTCCATACT+CGG | 0.537484 | 6.2:+20634194 | MS.gene061977:CDS |
| CATGAGCTGAGCAAAACTAC+TGG | 0.538533 | 6.2:+20635847 | MS.gene061977:CDS |
| AGCAAAACTACTGGAAATGC+AGG | 0.541389 | 6.2:+20635856 | MS.gene061977:CDS |
| ATGGAATGAACTCCACTTAG+CGG | 0.551180 | 6.2:-20634188 | None:intergenic |
| GCTCCGTGATCCTTCTTGAG+TGG | 0.554152 | 6.2:-20633622 | None:intergenic |
| GCTGAGATTTCTATCAGAGA+TGG | 0.556990 | 6.2:+20633816 | MS.gene061977:CDS |
| CAGAGAGTGTATGAGATGGA+AGG | 0.557046 | 6.2:+20631912 | None:intergenic |
| AAAGGTGTGGCTCTCATCAT+CGG | 0.560465 | 6.2:+20631951 | MS.gene061977:CDS |
| TCACTTCAATCCACTCAAGA+AGG | 0.563861 | 6.2:+20633612 | MS.gene061977:CDS |
| AACAATGTTACCCAAATCAC+CGG | 0.572762 | 6.2:-20633668 | None:intergenic |
| GCTCTTGGTGACACCACCAA+TGG | 0.572990 | 6.2:+20633366 | MS.gene061977:CDS |
| AGTGGAGTTGCAGCCATTGG+TGG | 0.573666 | 6.2:-20633379 | None:intergenic |
| AACTATCCTAAACAGATGAC+TGG | 0.575122 | 6.2:-20636476 | None:intergenic |
| TGGTGGTGTCACCAAGAGCA+TGG | 0.577938 | 6.2:-20633362 | None:intergenic |
| GATCCTGATGATCTTGGAAG+AGG | 0.581197 | 6.2:+20634239 | MS.gene061977:CDS |
| ACCGATGATGAGCGACATGC+CGG | 0.585361 | 6.2:+20633649 | MS.gene061977:CDS |
| GATTTCTATCAGAGATGGAA+AGG | 0.603534 | 6.2:+20633821 | MS.gene061977:CDS |
| GTGGAGTTCATTCCATACTC+GGG | 0.606530 | 6.2:+20634195 | MS.gene061977:CDS |
| TTCTTGAGTGGATTGAAGTG+AGG | 0.612233 | 6.2:-20633610 | None:intergenic |
| ATATGAAATCCATGAAGACC+TGG | 0.621175 | 6.2:-20633339 | None:intergenic |
| AATCCACTCAAGAAGGATCA+CGG | 0.630804 | 6.2:+20633619 | MS.gene061977:CDS |
| AGTTCATTCCATACTCGGGA+GGG | 0.640574 | 6.2:+20634199 | MS.gene061977:CDS |
| GAGTTCATTCCATACTCGGG+AGG | 0.641328 | 6.2:+20634198 | MS.gene061977:CDS |
| GAAAGAAGGTAATACCATCA+GGG | 0.648692 | 6.2:-20633696 | None:intergenic |
| GCATGTCGCTCATCATCGGT+AGG | 0.650098 | 6.2:-20633646 | None:intergenic |
| AAAGGGAACAGTGAAAGGTG+TGG | 0.714226 | 6.2:+20631938 | MS.gene061977:CDS |
| GCAGGTGCAAGAGTAGCATG+CGG | 0.736736 | 6.2:+20635874 | MS.gene061977:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAGTATTAAATTATAAATAA+AGG | - | chr6.2:20635475-20635494 | None:intergenic | 10.0% |
| !!! | CTTTATTTATAATTTAATAC+TGG | + | chr6.2:20635473-20635492 | MS.gene061977:intron | 10.0% |
| !! | AAAAAAAATAAGAAGAAAGA+AGG | - | chr6.2:20633713-20633732 | None:intergenic | 15.0% |
| !! | ATAAAAAAAAGCTCAAAAAT+TGG | - | chr6.2:20635812-20635831 | None:intergenic | 15.0% |
| !! | ATAGAAAAAATAAGAATGAA+AGG | + | chr6.2:20635589-20635608 | MS.gene061977:intron | 15.0% |
| !! | ATCATAACATAGTATATATT+CGG | - | chr6.2:20633158-20633177 | None:intergenic | 15.0% |
| !! | TATAAAAACTATAAAAATCG+AGG | - | chr6.2:20634353-20634372 | None:intergenic | 15.0% |
| !! | TATCATATTAGATATATATC+AGG | + | chr6.2:20632533-20632552 | MS.gene061977:intron | 15.0% |
| !! | TTCTTATCAAAATATTAGAT+TGG | + | chr6.2:20636019-20636038 | MS.gene061977:intron | 15.0% |
| !!! | ATGATATTTATTTTCAATGT+GGG | + | chr6.2:20632293-20632312 | MS.gene061977:intron | 15.0% |
| !!! | CTATGTTATGATTTTATATT+AGG | + | chr6.2:20633166-20633185 | MS.gene061977:intron | 15.0% |
| !!! | TTTATAATTTAATACTGGTT+AGG | + | chr6.2:20635478-20635497 | MS.gene061977:intron | 15.0% |
| !!! | TTTCTAGTTTTATATGATTT+TGG | + | chr6.2:20633227-20633246 | MS.gene061977:intron | 15.0% |
| !!! | TTTTGAGCTTTTTTTTATAA+TGG | + | chr6.2:20635814-20635833 | MS.gene061977:intron | 15.0% |
| !! | AAAAAAAAAAACAGCTTGTA+AGG | + | chr6.2:20632696-20632715 | MS.gene061977:intron | 20.0% |
| !! | AACTTTGAATGAAGTTTAAT+TGG | + | chr6.2:20633942-20633961 | MS.gene061977:intron | 20.0% |
| !! | AATACTAAAAAGTAAGCATT+TGG | - | chr6.2:20634541-20634560 | None:intergenic | 20.0% |
| !! | AGTAGATTATGATTTATTAC+TGG | - | chr6.2:20635940-20635959 | None:intergenic | 20.0% |
| !! | ATATTGAATAATGAGAAAAG+TGG | - | chr6.2:20633414-20633433 | None:intergenic | 20.0% |
| !! | ATTTAAGAAGTTTGTATGAA+AGG | + | chr6.2:20635625-20635644 | MS.gene061977:intron | 20.0% |
| !! | GTCAAATAGTAATTATGATT+GGG | + | chr6.2:20633266-20633285 | MS.gene061977:intron | 20.0% |
| !! | TAAAGTGCAAATTACTTATA+TGG | + | chr6.2:20634444-20634463 | MS.gene061977:intron | 20.0% |
| !! | TAAGTTAATCTGATAAAACA+TGG | + | chr6.2:20633543-20633562 | MS.gene061977:intron | 20.0% |
| !! | TATAAAGAAAATCGTCATTT+AGG | + | chr6.2:20634677-20634696 | MS.gene061977:intron | 20.0% |
| !! | TATATTTCATGTTTCATAAG+AGG | - | chr6.2:20632065-20632084 | None:intergenic | 20.0% |
| !! | TGAAACTCAATTAACAAATT+GGG | - | chr6.2:20635144-20635163 | None:intergenic | 20.0% |
| !! | TGAATTATTGAAATGTTGTA+TGG | - | chr6.2:20636105-20636124 | None:intergenic | 20.0% |
| !! | TGTCAAATAGTAATTATGAT+TGG | + | chr6.2:20633265-20633284 | MS.gene061977:intron | 20.0% |
| !! | TTAAATATAATCACATGTGT+TGG | - | chr6.2:20635364-20635383 | None:intergenic | 20.0% |
| !! | TTTATTGAATGATTGAGAAT+AGG | - | chr6.2:20635694-20635713 | None:intergenic | 20.0% |
| !!! | ATATAAAGGTGTATTTTTCA+TGG | - | chr6.2:20634477-20634496 | None:intergenic | 20.0% |
| !!! | ATCAATGAACTTGTTTTATT+AGG | + | chr6.2:20634288-20634307 | MS.gene061977:intron | 20.0% |
| !!! | CACTTTTCTTATCAAATATT+CGG | - | chr6.2:20633514-20633533 | None:intergenic | 20.0% |
| !!! | CTATGAATTGGTTTATATAT+CGG | + | chr6.2:20632830-20632849 | MS.gene061977:intron | 20.0% |
| !!! | GATGATATTTATTTTCAATG+TGG | + | chr6.2:20632292-20632311 | MS.gene061977:intron | 20.0% |
| !!! | GTTGGATTAATATTTTATCT+CGG | + | chr6.2:20636185-20636204 | MS.gene061977:intron | 20.0% |
| !!! | TAAATGACGATTTTCTTTAT+AGG | - | chr6.2:20634678-20634697 | None:intergenic | 20.0% |
| !!! | TTTCAATCTAGTCTTTATAA+AGG | - | chr6.2:20635079-20635098 | None:intergenic | 20.0% |
| ! | AACTACACAAAAGATATCAA+GGG | - | chr6.2:20634807-20634826 | None:intergenic | 25.0% |
| ! | ACATATTTGGAAGTTATTCA+AGG | - | chr6.2:20635045-20635064 | None:intergenic | 25.0% |
| ! | ATAATTCATTCTTACCAAAC+CGG | + | chr6.2:20632395-20632414 | MS.gene061977:intron | 25.0% |
| ! | ATGTAACTGGAAAAATAACA+GGG | + | chr6.2:20633310-20633329 | MS.gene061977:CDS | 25.0% |
| ! | ATTCAGTAAGTAAATGAAGT+AGG | + | chr6.2:20636120-20636139 | MS.gene061977:intron | 25.0% |
| ! | ATTTATTCAATGTAAAGCGT+CGG | - | chr6.2:20633457-20633476 | None:intergenic | 25.0% |
| ! | CAAATAGATACACTATGAAT+TGG | + | chr6.2:20632818-20632837 | MS.gene061977:intron | 25.0% |
| ! | CAATTCATAGTGTATCTATT+TGG | - | chr6.2:20632820-20632839 | None:intergenic | 25.0% |
| ! | CAGTATCATGATTAATCTAA+AGG | - | chr6.2:20636211-20636230 | None:intergenic | 25.0% |
| ! | CTAAGTGGTAGAAAATATAA+AGG | - | chr6.2:20634491-20634510 | None:intergenic | 25.0% |
| ! | CTGAAACTCAATTAACAAAT+TGG | - | chr6.2:20635145-20635164 | None:intergenic | 25.0% |
| ! | GAAACTCAATTAACAAATTG+GGG | - | chr6.2:20635143-20635162 | None:intergenic | 25.0% |
| ! | GACTAGATTGAAATACAAAA+AGG | + | chr6.2:20635086-20635105 | MS.gene061977:intron | 25.0% |
| ! | GGATTAATAAAACTTGTATC+AGG | - | chr6.2:20635117-20635136 | None:intergenic | 25.0% |
| ! | TAATAAAACTTGTATCAGGT+TGG | - | chr6.2:20635113-20635132 | None:intergenic | 25.0% |
| ! | TAATCTTAATATGAGAGGAA+TGG | + | chr6.2:20636274-20636293 | MS.gene061977:intron | 25.0% |
| ! | TCTTATTCTCTTTACAAAAC+TGG | + | chr6.2:20633020-20633039 | MS.gene061977:intron | 25.0% |
| ! | TTAGATTAATCATGATACTG+AGG | + | chr6.2:20636211-20636230 | MS.gene061977:intron | 25.0% |
| !! | AATTGTTGTTATGAATCCAA+AGG | - | chr6.2:20635762-20635781 | None:intergenic | 25.0% |
| !! | ATTGTTGTTATGAATCCAAA+GGG | - | chr6.2:20635761-20635780 | None:intergenic | 25.0% |
| !! | GAGGTAAGCATTTAAATTTT+TGG | + | chr6.2:20634258-20634277 | MS.gene061977:intron | 25.0% |
| !! | GTTTTTATAGAGTAACTCAT+TGG | + | chr6.2:20634364-20634383 | MS.gene061977:intron | 25.0% |
| !!! | AAAACAAGTTCATTGATTCT+TGG | - | chr6.2:20634285-20634304 | None:intergenic | 25.0% |
| !!! | AGTCTTTATTTTACAACACT+GGG | - | chr6.2:20633988-20634007 | None:intergenic | 25.0% |
| !!! | ATTTTCTTCTAAAGCTTCTT+TGG | + | chr6.2:20635231-20635250 | MS.gene061977:intron | 25.0% |
| !!! | GCTTTTTTTTATAATGGAAC+AGG | + | chr6.2:20635820-20635839 | MS.gene061977:intron | 25.0% |
| !!! | TACAAAGTGTTGTTAAATAG+TGG | + | chr6.2:20634060-20634079 | MS.gene061977:intron | 25.0% |
| !!! | TAGTCTTTATTTTACAACAC+TGG | - | chr6.2:20633989-20634008 | None:intergenic | 25.0% |
| !!! | TTTTTTTATAATGGAACAGG+TGG | + | chr6.2:20635823-20635842 | MS.gene061977:intron | 25.0% |
| AAAGGAAAAATCCTTTGTGA+AGG | + | chr6.2:20635643-20635662 | MS.gene061977:intron | 30.0% | |
| AACACATCATGCACATATAT+GGG | - | chr6.2:20634855-20634874 | None:intergenic | 30.0% | |
| AATACTCGTGACAAGTAAAT+AGG | + | chr6.2:20634953-20634972 | MS.gene061977:intron | 30.0% | |
| AATTAACAATTAGCGGAATG+AGG | - | chr6.2:20633877-20633896 | None:intergenic | 30.0% | |
| ACATTATCTCTTATCAATGC+TGG | + | chr6.2:20633085-20633104 | MS.gene061977:intron | 30.0% | |
| ACATTTCTGTCTTATGCTAA+CGG | - | chr6.2:20636374-20636393 | None:intergenic | 30.0% | |
| CAAATAGATAGACTGTGAAT+TGG | + | chr6.2:20632358-20632377 | MS.gene061977:intron | 30.0% | |
| CAATTCACAGTCTATCTATT+TGG | - | chr6.2:20632360-20632379 | None:intergenic | 30.0% | |
| CATCATGACATAAACTCAAA+CGG | - | chr6.2:20636061-20636080 | None:intergenic | 30.0% | |
| CATGTAACTGGAAAAATAAC+AGG | + | chr6.2:20633309-20633328 | MS.gene061977:CDS | 30.0% | |
| CATTGAAAAAAGATATCGTC+TGG | - | chr6.2:20632752-20632771 | None:intergenic | 30.0% | |
| CCACTCTTTGTAAACTATTT+CGG | + | chr6.2:20633062-20633081 | MS.gene061977:intron | 30.0% | |
| CCACTTCAATTAACAATTAG+CGG | - | chr6.2:20633884-20633903 | None:intergenic | 30.0% | |
| CCAGATAATCTTAATATGAG+AGG | + | chr6.2:20636269-20636288 | MS.gene061977:intron | 30.0% | |
| CCTCTCATATTAAGATTATC+TGG | - | chr6.2:20636272-20636291 | None:intergenic | 30.0% | |
| CGAATAACTAATCTCATCAA+AGG | - | chr6.2:20634737-20634756 | None:intergenic | 30.0% | |
| CTACACAACTAAAATGTCAA+TGG | - | chr6.2:20635301-20635320 | None:intergenic | 30.0% | |
| CTTAACATTGAAGATGTATC+CGG | + | chr6.2:20635329-20635348 | MS.gene061977:intron | 30.0% | |
| GAACTACACAAAAGATATCA+AGG | - | chr6.2:20634808-20634827 | None:intergenic | 30.0% | |
| GATATCAGAGTCTATCTATT+CGG | - | chr6.2:20632517-20632536 | None:intergenic | 30.0% | |
| GGACTAACTTGATACATATT+TGG | - | chr6.2:20635058-20635077 | None:intergenic | 30.0% | |
| GTTTATACGCTGAATATGTA+CGG | - | chr6.2:20632568-20632587 | None:intergenic | 30.0% | |
| TAACACATCATGCACATATA+TGG | - | chr6.2:20634856-20634875 | None:intergenic | 30.0% | |
| TCGTCATTTAGGAAGTAAAA+AGG | + | chr6.2:20634688-20634707 | MS.gene061977:intron | 30.0% | |
| TCTATCTATTCGGTAATGTT+TGG | - | chr6.2:20632507-20632526 | None:intergenic | 30.0% | |
| TGAAATGAGTTAACAAAGAG+TGG | - | chr6.2:20632894-20632913 | None:intergenic | 30.0% | |
| ! | ATATTTTCTACCACTTAGCT+TGG | + | chr6.2:20634493-20634512 | MS.gene061977:intron | 30.0% |
| ! | GAATCATTTGAAGCATAACA+TGG | - | chr6.2:20634773-20634792 | None:intergenic | 30.0% |
| ! | TTAATACTGGTTAGGATAGA+GGG | + | chr6.2:20635486-20635505 | MS.gene061977:intron | 30.0% |
| ! | TTGTTGTTATGAATCCAAAG+GGG | - | chr6.2:20635760-20635779 | None:intergenic | 30.0% |
| ! | TTTAATACTGGTTAGGATAG+AGG | + | chr6.2:20635485-20635504 | MS.gene061977:intron | 30.0% |
| !! | GAAGTGTTTCAATGCAATTT+TGG | + | chr6.2:20633565-20633584 | MS.gene061977:intron | 30.0% |
| !! | TCTATCTATTTGGTAGTGTT+TGG | - | chr6.2:20632350-20632369 | None:intergenic | 30.0% |
| !! | TTTTGTTTGTCGATCATTTC+TGG | + | chr6.2:20634922-20634941 | MS.gene061977:intron | 30.0% |
| !!! | CTTTTTTCAATGTGTGACTT+CGG | + | chr6.2:20632760-20632779 | MS.gene061977:intron | 30.0% |
| AAAAGATATCAAGGGCTGAA+AGG | - | chr6.2:20634799-20634818 | None:intergenic | 35.0% | |
| AAAGATATCAAGGGCTGAAA+GGG | - | chr6.2:20634798-20634817 | None:intergenic | 35.0% | |
| AACAATGTTACCCAAATCAC+CGG | - | chr6.2:20633671-20633690 | None:intergenic | 35.0% | |
| AACCATTAGAACTACACCTT+GGG | - | chr6.2:20634570-20634589 | None:intergenic | 35.0% | |
| AATTATGATTGGGATTGTGC+AGG | + | chr6.2:20633276-20633295 | MS.gene061977:intron | 35.0% | |
| ACAACATTGACACGTTAAGA+CGG | - | chr6.2:20635410-20635429 | None:intergenic | 35.0% | |
| ACAGAAGCTATGTTTCAAAG+TGG | - | chr6.2:20634327-20634346 | None:intergenic | 35.0% | |
| AGAAAGAAGGTAATACCATC+AGG | - | chr6.2:20633700-20633719 | None:intergenic | 35.0% | |
| AGAGAAGCTATGTAGTTAGA+AGG | + | chr6.2:20635560-20635579 | MS.gene061977:intron | 35.0% | |
| AGGAGATTGAAAAGGATTAC+AGG | + | chr6.2:20634606-20634625 | MS.gene061977:intron | 35.0% | |
| AGTATATATTCGGTAGTGCT+TGG | - | chr6.2:20633148-20633167 | None:intergenic | 35.0% | |
| ATAAACCACTTCAATTAGCC+TGG | + | chr6.2:20632582-20632601 | MS.gene061977:intron | 35.0% | |
| ATATGAAATCCATGAAGACC+TGG | - | chr6.2:20633342-20633361 | None:intergenic | 35.0% | |
| ATGTTGTATGGTATGAGTCA+AGG | - | chr6.2:20636093-20636112 | None:intergenic | 35.0% | |
| ATTATGATTGGGATTGTGCA+GGG | + | chr6.2:20633277-20633296 | MS.gene061977:intron | 35.0% | |
| CAATAATTCCACCTTCACAA+AGG | - | chr6.2:20635657-20635676 | None:intergenic | 35.0% | |
| CAGCTATAGAGAAATCAACT+TGG | - | chr6.2:20636335-20636354 | None:intergenic | 35.0% | |
| CCGAAATAGTTTACAAAGAG+TGG | - | chr6.2:20633065-20633084 | None:intergenic | 35.0% | |
| CCGCTAATTGTTAATTGAAG+TGG | + | chr6.2:20633881-20633900 | MS.gene061977:intron | 35.0% | |
| CTACATGTTGAAAGTGAGAA+AGG | - | chr6.2:20634165-20634184 | None:intergenic | 35.0% | |
| GAAAGAAGGTAATACCATCA+GGG | - | chr6.2:20633699-20633718 | None:intergenic | 35.0% | |
| GAGAAGCTATGTAGTTAGAA+GGG | + | chr6.2:20635561-20635580 | MS.gene061977:intron | 35.0% | |
| GATTTCTATCAGAGATGGAA+AGG | + | chr6.2:20633821-20633840 | MS.gene061977:CDS | 35.0% | |
| GGAGATTGAAAAGGATTACA+GGG | + | chr6.2:20634607-20634626 | MS.gene061977:intron | 35.0% | |
| GGGAATTATACACATGTAAC+TGG | + | chr6.2:20633297-20633316 | MS.gene061977:intron | 35.0% | |
| TACAGATCAACTCATGTTTG+AGG | - | chr6.2:20634885-20634904 | None:intergenic | 35.0% | |
| TATGTTCTGCAATTCGCAAT+AGG | + | chr6.2:20634123-20634142 | MS.gene061977:intron | 35.0% | |
| TCAATTAACAAATTGGGGCT+TGG | - | chr6.2:20635138-20635157 | None:intergenic | 35.0% | |
| TGAATGATTGAGAATAGGAG+AGG | - | chr6.2:20635689-20635708 | None:intergenic | 35.0% | |
| TGCAAAACAGAAAACTCTCA+AGG | - | chr6.2:20633790-20633809 | None:intergenic | 35.0% | |
| TGTGAAGGTGGAATTATTGA+AGG | + | chr6.2:20635658-20635677 | MS.gene061977:intron | 35.0% | |
| TGTTGTTATGAATCCAAAGG+GGG | - | chr6.2:20635759-20635778 | None:intergenic | 35.0% | |
| TGTTTCAAAGTGGAAAAACG+AGG | - | chr6.2:20634317-20634336 | None:intergenic | 35.0% | |
| TTAATCATGATACTGAGGTG+TGG | + | chr6.2:20636216-20636235 | MS.gene061977:intron | 35.0% | |
| TTTATATGTTCAGTAGCCCT+TGG | - | chr6.2:20632969-20632988 | None:intergenic | 35.0% | |
| ! | AATTAGCCTGAAATTGCCAT+TGG | - | chr6.2:20632666-20632685 | None:intergenic | 35.0% |
| ! | ATTAGCCTGAAATTGCCATT+GGG | - | chr6.2:20632665-20632684 | None:intergenic | 35.0% |
| ! | GTAAATGAAGTAGGTTGACT+TGG | + | chr6.2:20636129-20636148 | MS.gene061977:intron | 35.0% |
| ! | TCTTTTGTGTAGTTCCTGAT+CGG | + | chr6.2:20634813-20634832 | MS.gene061977:intron | 35.0% |
| ! | TTGAGAGTTTTCTGTTTTGC+AGG | + | chr6.2:20633789-20633808 | MS.gene061977:intron | 35.0% |
| ! | TTTTAGTATTACCGTTCCCA+AGG | + | chr6.2:20634551-20634570 | MS.gene061977:intron | 35.0% |
| !! | ATTTGGTAGTGTTTGGCATA+AGG | - | chr6.2:20632343-20632362 | None:intergenic | 35.0% |
| !! | CTTTACAAAACTGGCTTGTA+AGG | + | chr6.2:20633029-20633048 | MS.gene061977:intron | 35.0% |
| !! | TAGTTCTAATGGTTGAGCTA+CGG | + | chr6.2:20634576-20634595 | MS.gene061977:intron | 35.0% |
| !! | TTTGGTAGTGTTTGGCATAA+GGG | - | chr6.2:20632342-20632361 | None:intergenic | 35.0% |
| AAAAAACAGCTTGTAAGGCG+AGG | + | chr6.2:20632701-20632720 | MS.gene061977:intron | 40.0% | |
| AAAAACAGCTTGTAAGGCGA+GGG | + | chr6.2:20632702-20632721 | MS.gene061977:intron | 40.0% | |
| AAAAGTAAGCATTTGGCACG+AGG | - | chr6.2:20634534-20634553 | None:intergenic | 40.0% | |
| AAAATAACAGGGTTGTCTCC+AGG | + | chr6.2:20633321-20633340 | MS.gene061977:CDS | 40.0% | |
| AACATGTAGATTCCGCTAAG+TGG | + | chr6.2:20634176-20634195 | MS.gene061977:intron | 40.0% | |
| AATCCACTCAAGAAGGATCA+CGG | + | chr6.2:20633619-20633638 | MS.gene061977:CDS | 40.0% | |
| AATTGCTGACCAGGTATCAT+TGG | + | chr6.2:20636450-20636469 | MS.gene061977:intron | 40.0% | |
| ACAATGTATAAGTTGTCCCC+TGG | + | chr6.2:20633757-20633776 | MS.gene061977:intron | 40.0% | |
| ACAATTGCTAATTGCTGACC+AGG | + | chr6.2:20636441-20636460 | MS.gene061977:intron | 40.0% | |
| ACATATGAAGCCAAGCTAAG+TGG | - | chr6.2:20634506-20634525 | None:intergenic | 40.0% | |
| AGAGAGAGAAAGAACCATTG+GGG | - | chr6.2:20632016-20632035 | None:intergenic | 40.0% | |
| AGAGAGAGAGAAAGAACCAT+TGG | - | chr6.2:20632018-20632037 | None:intergenic | 40.0% | |
| AGCAAAACTACTGGAAATGC+AGG | + | chr6.2:20635856-20635875 | MS.gene061977:CDS | 40.0% | |
| AGCGACTTAACTGCAATATG+AGG | + | chr6.2:20635163-20635182 | MS.gene061977:intron | 40.0% | |
| AGTGGAGTTCATTCCATACT+CGG | + | chr6.2:20634194-20634213 | MS.gene061977:CDS | 40.0% | |
| ATCGGAGATAACAACGTTAG+AGG | + | chr6.2:20631969-20631988 | MS.gene061977:CDS | 40.0% | |
| ATGGAATGAACTCCACTTAG+CGG | - | chr6.2:20634191-20634210 | None:intergenic | 40.0% | |
| ATTGAAGATGTATCCGGTGT+CGG | + | chr6.2:20635335-20635354 | MS.gene061977:intron | 40.0% | |
| ATTTGGCAGTGTTTGACGTA+AGG | - | chr6.2:20632803-20632822 | None:intergenic | 40.0% | |
| CAACCATTAGAACTACACCT+TGG | - | chr6.2:20634571-20634590 | None:intergenic | 40.0% | |
| CAATTTACTACTTCCCCCTT+TGG | + | chr6.2:20635743-20635762 | MS.gene061977:intron | 40.0% | |
| CAGCCTCTCAAGTCAAATTT+CGG | + | chr6.2:20636160-20636179 | MS.gene061977:intron | 40.0% | |
| GAAGTTTAATTGGATCCCGA+GGG | + | chr6.2:20633952-20633971 | MS.gene061977:intron | 40.0% | |
| GAGAGAGAGAAAGAACCATT+GGG | - | chr6.2:20632017-20632036 | None:intergenic | 40.0% | |
| GATTTGGGTAACATTGTTGC+AGG | + | chr6.2:20633673-20633692 | MS.gene061977:CDS | 40.0% | |
| GCACTTGAAGGAGATTGAAA+AGG | + | chr6.2:20634598-20634617 | MS.gene061977:intron | 40.0% | |
| GCGACTTAACTGCAATATGA+GGG | + | chr6.2:20635164-20635183 | MS.gene061977:intron | 40.0% | |
| GCTGAGATTTCTATCAGAGA+TGG | + | chr6.2:20633816-20633835 | MS.gene061977:CDS | 40.0% | |
| GGAAAAATCCTTTGTGAAGG+TGG | + | chr6.2:20635646-20635665 | MS.gene061977:intron | 40.0% | |
| GGATTTCATATCCATGCTCT+TGG | + | chr6.2:20633351-20633370 | MS.gene061977:CDS | 40.0% | |
| TCAAGTCAAATTTCGGCTGT+TGG | + | chr6.2:20636167-20636186 | MS.gene061977:intron | 40.0% | |
| TCAATTCGTAGAAACCGATC+AGG | - | chr6.2:20634830-20634849 | None:intergenic | 40.0% | |
| TCACTTCAATCCACTCAAGA+AGG | + | chr6.2:20633612-20633631 | MS.gene061977:CDS | 40.0% | |
| TCGGTAATGTTTGGCGTAAA+GGG | - | chr6.2:20632498-20632517 | None:intergenic | 40.0% | |
| TGAAGTTTAATTGGATCCCG+AGG | + | chr6.2:20633951-20633970 | MS.gene061977:intron | 40.0% | |
| TTACCTCTTCCAAGATCATC+AGG | - | chr6.2:20634245-20634264 | None:intergenic | 40.0% | |
| TTAGAACTACACCTTGGGAA+CGG | - | chr6.2:20634565-20634584 | None:intergenic | 40.0% | |
| TTAGCCTGAAATTGCCATTG+GGG | - | chr6.2:20632664-20632683 | None:intergenic | 40.0% | |
| TTCGGTAATGTTTGGCGTAA+AGG | - | chr6.2:20632499-20632518 | None:intergenic | 40.0% | |
| TTGCGAATTGCAGAACATAG+TGG | - | chr6.2:20634122-20634141 | None:intergenic | 40.0% | |
| TTGTATGGTATGAGTCAAGG+AGG | - | chr6.2:20636090-20636109 | None:intergenic | 40.0% | |
| TTTGGCAGTGTTTGACGTAA+GGG | - | chr6.2:20632802-20632821 | None:intergenic | 40.0% | |
| ! | AACTCTCAAGGAGATTTTCC+AGG | - | chr6.2:20633778-20633797 | None:intergenic | 40.0% |
| ! | ACTCTCAAGGAGATTTTCCA+GGG | - | chr6.2:20633777-20633796 | None:intergenic | 40.0% |
| ! | TGTTACTTGGTCTCACTCTT+TGG | + | chr6.2:20632420-20632439 | MS.gene061977:intron | 40.0% |
| !! | AAAACTGGCTTGTAAGGTGA+GGG | + | chr6.2:20633035-20633054 | MS.gene061977:intron | 40.0% |
| !! | AAGCTTCTTTGGAACTCTGA+AGG | + | chr6.2:20635242-20635261 | MS.gene061977:intron | 40.0% |
| !! | ACTTACCAAACCGACTTGTA+AGG | + | chr6.2:20632863-20632882 | MS.gene061977:intron | 40.0% |
| !! | CTTACCAAACCGACTTGTAA+GGG | + | chr6.2:20632864-20632883 | MS.gene061977:intron | 40.0% |
| !! | TTCCCAAGGTGTAGTTCTAA+TGG | + | chr6.2:20634565-20634584 | MS.gene061977:intron | 40.0% |
| !! | TTCTTGAGTGGATTGAAGTG+AGG | - | chr6.2:20633613-20633632 | None:intergenic | 40.0% |
| !! | TTGGTAGTGTTTGGCATAAG+GGG | - | chr6.2:20632341-20632360 | None:intergenic | 40.0% |
| !!! | GTGGTCTTGACTTGGTATTT+TGG | + | chr6.2:20632604-20632623 | MS.gene061977:intron | 40.0% |
| AAAGGGAACAGTGAAAGGTG+TGG | + | chr6.2:20631938-20631957 | MS.gene061977:CDS | 45.0% | |
| AATACCAAGTCAAGACCACC+AGG | - | chr6.2:20632603-20632622 | None:intergenic | 45.0% | |
| AGTGAGACCAAGTAACAAGC+CGG | - | chr6.2:20632417-20632436 | None:intergenic | 45.0% | |
| AGTTCATTCCATACTCGGGA+GGG | + | chr6.2:20634199-20634218 | MS.gene061977:CDS | 45.0% | |
| CACTTTGTTCAAGACCCCAA+TGG | + | chr6.2:20631999-20632018 | MS.gene061977:intron | 45.0% | |
| CATGAGCTGAGCAAAACTAC+TGG | + | chr6.2:20635847-20635866 | MS.gene061977:CDS | 45.0% | |
| CATGCTGATCCTGATGATCT+TGG | + | chr6.2:20634233-20634252 | MS.gene061977:CDS | 45.0% | |
| CCAAAACCGTAAGCAATGGA+GGG | + | chr6.2:20632244-20632263 | MS.gene061977:intron | 45.0% | |
| CCTTCCAAAACCGTAAGCAA+TGG | + | chr6.2:20632240-20632259 | MS.gene061977:intron | 45.0% | |
| CTTATGCTAACGGTCTACAG+CGG | - | chr6.2:20636364-20636383 | None:intergenic | 45.0% | |
| GAAAAGTGGAAACCAACCAG+TGG | - | chr6.2:20633400-20633419 | None:intergenic | 45.0% | |
| GATCCTGATGATCTTGGAAG+AGG | + | chr6.2:20634239-20634258 | MS.gene061977:CDS | 45.0% | |
| GTGGAGTTCATTCCATACTC+GGG | + | chr6.2:20634195-20634214 | MS.gene061977:CDS | 45.0% | |
| TCCAAAACCGTAAGCAATGG+AGG | + | chr6.2:20632243-20632262 | MS.gene061977:intron | 45.0% | |
| TCTGATGTCCATGTCTGTGT+CGG | + | chr6.2:20635431-20635450 | MS.gene061977:intron | 45.0% | |
| TTCTCCCCAATGGCAATTTC+AGG | + | chr6.2:20632657-20632676 | MS.gene061977:intron | 45.0% | |
| TTGGCAGTGTTTGACGTAAG+GGG | - | chr6.2:20632801-20632820 | None:intergenic | 45.0% | |
| ! | AAAGGTGTGGCTCTCATCAT+CGG | + | chr6.2:20631951-20631970 | MS.gene061977:CDS | 45.0% |
| ! | AACCACTTCAATTAGCCTGG+TGG | + | chr6.2:20632585-20632604 | MS.gene061977:intron | 45.0% |
| ! | AGATTATCTGGCTTCCACAC+TGG | - | chr6.2:20636260-20636279 | None:intergenic | 45.0% |
| ! | ATGTCTGTGTCGGTACTTCA+CGG | + | chr6.2:20635441-20635460 | MS.gene061977:intron | 45.0% |
| ! | CTCTCAAGGAGATTTTCCAG+GGG | - | chr6.2:20633776-20633795 | None:intergenic | 45.0% |
| ! | GATCGACAAACAAAAGCACG+TGG | - | chr6.2:20634917-20634936 | None:intergenic | 45.0% |
| ! | TGGTAGTGTTTGGCATAAGG+GGG | - | chr6.2:20632340-20632359 | None:intergenic | 45.0% |
| ! | TTGACTTGAGAGGCTGCATA+GGG | - | chr6.2:20636156-20636175 | None:intergenic | 45.0% |
| ! | TTTGGAGTGTTCTCCTCTCA+AGG | + | chr6.2:20632622-20632641 | MS.gene061977:intron | 45.0% |
| !! | CAAAACTGGCTTGTAAGGTG+AGG | + | chr6.2:20633034-20633053 | MS.gene061977:intron | 45.0% |
| !! | CAGCCGAAATTTGACTTGAG+AGG | - | chr6.2:20636166-20636185 | None:intergenic | 45.0% |
| !! | TACCAAACCGGCTTGTTACT+TGG | + | chr6.2:20632407-20632426 | MS.gene061977:intron | 45.0% |
| !! | TTTGACTTGAGAGGCTGCAT+AGG | - | chr6.2:20636157-20636176 | None:intergenic | 45.0% |
| !!! | CCATTGCTTACGGTTTTGGA+AGG | - | chr6.2:20632243-20632262 | None:intergenic | 45.0% |
| AAAAGAGCAGCAGTCCATCC+TGG | - | chr6.2:20635269-20635288 | None:intergenic | 50.0% | |
| AACATTGTTGCAGGCCCTGA+TGG | + | chr6.2:20633682-20633701 | MS.gene061977:CDS | 50.0% | |
| ACTGGGTAAGTACAGTCCCT+CGG | - | chr6.2:20633971-20633990 | None:intergenic | 50.0% | |
| AGTAAGCATTTGGCACGAGG+AGG | - | chr6.2:20634531-20634550 | None:intergenic | 50.0% | |
| AGTGGCACTCCCTTACAAGT+CGG | - | chr6.2:20632876-20632895 | None:intergenic | 50.0% | |
| CACTCCCTTACAAGTCGGTT+TGG | - | chr6.2:20632871-20632890 | None:intergenic | 50.0% | |
| CGGTAGTGCTTGGCATAAGA+GGG | - | chr6.2:20633138-20633157 | None:intergenic | 50.0% | |
| GACCAAGTAACAAGCCGGTT+TGG | - | chr6.2:20632412-20632431 | None:intergenic | 50.0% | |
| GACCACCAGGCTAATTGAAG+TGG | - | chr6.2:20632590-20632609 | None:intergenic | 50.0% | |
| GACTGGAGTCCAATGATACC+TGG | - | chr6.2:20636462-20636481 | None:intergenic | 50.0% | |
| GAGTTCATTCCATACTCGGG+AGG | + | chr6.2:20634198-20634217 | MS.gene061977:CDS | 50.0% | |
| GGCTTTGCCTTCTTTACGTC+AGG | + | chr6.2:20633586-20633605 | MS.gene061977:intron | 50.0% | |
| GGTAGTGTTTGGCATAAGGG+GGG | - | chr6.2:20632339-20632358 | None:intergenic | 50.0% | |
| GGTGGAAAGGGAACAGTGAA+AGG | + | chr6.2:20631933-20631952 | MS.gene061977:CDS | 50.0% | |
| GTGACACCCTCCATTGCTTA+CGG | - | chr6.2:20632253-20632272 | None:intergenic | 50.0% | |
| GTGAGGACCTGACGTAAAGA+AGG | - | chr6.2:20633596-20633615 | None:intergenic | 50.0% | |
| GTGTTCTCCTCTCAAGGTCT+CGG | + | chr6.2:20632628-20632647 | MS.gene061977:intron | 50.0% | |
| TCGGTAGTGCTTGGCATAAG+AGG | - | chr6.2:20633139-20633158 | None:intergenic | 50.0% | |
| TGGCAGTGTTTGACGTAAGG+GGG | - | chr6.2:20632800-20632819 | None:intergenic | 50.0% | |
| TGTTCTCCTCTCAAGGTCTC+GGG | + | chr6.2:20632629-20632648 | MS.gene061977:intron | 50.0% | |
| ! | CCCTCCATTGCTTACGGTTT+TGG | - | chr6.2:20632247-20632266 | None:intergenic | 50.0% |
| ! | TTAGCCTGGTGGTCTTGACT+TGG | + | chr6.2:20632596-20632615 | MS.gene061977:intron | 50.0% |
| !! | CTTTGGAACTCTGAAGGTCC+AGG | + | chr6.2:20635248-20635267 | MS.gene061977:intron | 50.0% |
| !! | GTGAAGTACCGACACAGACA+TGG | - | chr6.2:20635442-20635461 | None:intergenic | 50.0% |
| ACCAATGGCTGCAACTCCAC+TGG | + | chr6.2:20633381-20633400 | MS.gene061977:CDS | 55.0% | |
| ACCAGTGGAGTTGCAGCCAT+TGG | - | chr6.2:20633385-20633404 | None:intergenic | 55.0% | |
| ACCGATGATGAGCGACATGC+CGG | + | chr6.2:20633649-20633668 | MS.gene061977:CDS | 55.0% | |
| ACCGGCATGTCGCTCATCAT+CGG | - | chr6.2:20633653-20633672 | None:intergenic | 55.0% | |
| AGTGGAGTTGCAGCCATTGG+TGG | - | chr6.2:20633382-20633401 | None:intergenic | 55.0% | |
| ATCGAACCCGAGACCTTGAG+AGG | - | chr6.2:20632638-20632657 | None:intergenic | 55.0% | |
| ATGGCTGCAACTCCACTGGT+TGG | + | chr6.2:20633385-20633404 | MS.gene061977:intron | 55.0% | |
| CAATACACCCCCTACGCCAA+GGG | + | chr6.2:20632950-20632969 | MS.gene061977:intron | 55.0% | |
| CTGGGTAAGTACAGTCCCTC+GGG | - | chr6.2:20633970-20633989 | None:intergenic | 55.0% | |
| GAGCGACATGCCGGTGATTT+GGG | + | chr6.2:20633658-20633677 | MS.gene061977:CDS | 55.0% | |
| GCAGGTGCAAGAGTAGCATG+CGG | + | chr6.2:20635874-20635893 | MS.gene061977:CDS | 55.0% | |
| GCATGTCGCTCATCATCGGT+AGG | - | chr6.2:20633649-20633668 | None:intergenic | 55.0% | |
| GCTCCGTGATCCTTCTTGAG+TGG | - | chr6.2:20633625-20633644 | None:intergenic | 55.0% | |
| GGGTTGTCTCCAGGTCTTCA+TGG | + | chr6.2:20633330-20633349 | MS.gene061977:CDS | 55.0% | |
| GGTTGAGCTACGGCACTTGA+AGG | + | chr6.2:20634586-20634605 | MS.gene061977:intron | 55.0% | |
| GTTCAGTAGCCCTTGGCGTA+GGG | - | chr6.2:20632962-20632981 | None:intergenic | 55.0% | |
| TCAATACACCCCCTACGCCA+AGG | + | chr6.2:20632949-20632968 | MS.gene061977:intron | 55.0% | |
| TCGGGTTCGATTCTCCCCAA+TGG | + | chr6.2:20632647-20632666 | MS.gene061977:intron | 55.0% | |
| TGAGCGACATGCCGGTGATT+TGG | + | chr6.2:20633657-20633676 | MS.gene061977:CDS | 55.0% | |
| TGTTCAGTAGCCCTTGGCGT+AGG | - | chr6.2:20632963-20632982 | None:intergenic | 55.0% | |
| TTCAGTAGCCCTTGGCGTAG+GGG | - | chr6.2:20632961-20632980 | None:intergenic | 55.0% | |
| TTCCACACTGGATCCTCTGC+AGG | - | chr6.2:20636248-20636267 | None:intergenic | 55.0% | |
| ! | ATCACGTGCGAGTGTCGTGT+TGG | - | chr6.2:20633481-20633500 | None:intergenic | 55.0% |
| ! | CATGTGTTGGTGTCCGACAC+CGG | - | chr6.2:20635351-20635370 | None:intergenic | 55.0% |
| ! | GCTCTTGGTGACACCACCAA+TGG | + | chr6.2:20633366-20633385 | MS.gene061977:CDS | 55.0% |
| ! | GGAACTCTGAAGGTCCAGGA+TGG | + | chr6.2:20635252-20635271 | MS.gene061977:intron | 55.0% |
| !! | TGGTGGTGTCACCAAGAGCA+TGG | - | chr6.2:20633365-20633384 | None:intergenic | 55.0% |
| AACGACAGCCCTCCCGAGTA+TGG | - | chr6.2:20634210-20634229 | None:intergenic | 60.0% | |
| AGCCTGCAGAGGATCCAGTG+TGG | + | chr6.2:20636243-20636262 | MS.gene061977:intron | 60.0% | |
| TCAGTAGCCCTTGGCGTAGG+GGG | - | chr6.2:20632960-20632979 | None:intergenic | 60.0% | |
| GGTGTGGCTAGAGCCTGCAG+AGG | + | chr6.2:20636232-20636251 | MS.gene061977:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.2 | gene | 20631927 | 20636491 | 20631927 | ID=MS.gene061977 |
| chr6.2 | mRNA | 20631927 | 20636491 | 20631927 | ID=MS.gene061977.t1;Parent=MS.gene061977 |
| chr6.2 | exon | 20631927 | 20631990 | 20631927 | ID=MS.gene061977.t1.exon1;Parent=MS.gene061977.t1 |
| chr6.2 | CDS | 20631927 | 20631990 | 20631927 | ID=cds.MS.gene061977.t1;Parent=MS.gene061977.t1 |
| chr6.2 | exon | 20633298 | 20633402 | 20633298 | ID=MS.gene061977.t1.exon2;Parent=MS.gene061977.t1 |
| chr6.2 | CDS | 20633298 | 20633402 | 20633298 | ID=cds.MS.gene061977.t1;Parent=MS.gene061977.t1 |
| chr6.2 | exon | 20633608 | 20633703 | 20633608 | ID=MS.gene061977.t1.exon3;Parent=MS.gene061977.t1 |
| chr6.2 | CDS | 20633608 | 20633703 | 20633608 | ID=cds.MS.gene061977.t1;Parent=MS.gene061977.t1 |
| chr6.2 | exon | 20633811 | 20633842 | 20633811 | ID=MS.gene061977.t1.exon4;Parent=MS.gene061977.t1 |
| chr6.2 | CDS | 20633811 | 20633842 | 20633811 | ID=cds.MS.gene061977.t1;Parent=MS.gene061977.t1 |
| chr6.2 | exon | 20634185 | 20634260 | 20634185 | ID=MS.gene061977.t1.exon5;Parent=MS.gene061977.t1 |
| chr6.2 | CDS | 20634185 | 20634260 | 20634185 | ID=cds.MS.gene061977.t1;Parent=MS.gene061977.t1 |
| chr6.2 | exon | 20635842 | 20635895 | 20635842 | ID=MS.gene061977.t1.exon6;Parent=MS.gene061977.t1 |
| chr6.2 | CDS | 20635842 | 20635895 | 20635842 | ID=cds.MS.gene061977.t1;Parent=MS.gene061977.t1 |
| chr6.2 | exon | 20636463 | 20636491 | 20636463 | ID=MS.gene061977.t1.exon7;Parent=MS.gene061977.t1 |
| chr6.2 | CDS | 20636463 | 20636491 | 20636463 | ID=cds.MS.gene061977.t1;Parent=MS.gene061977.t1 |
| Gene Sequence |
| Protein sequence |
