Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06253.t1 | XP_003602759.1 | 97.8 | 555 | 11 | 1 | 1 | 555 | 1 | 554 | 4.60E-301 | 1043.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06253.t1 | G7J3A9 | 97.8 | 555 | 11 | 1 | 1 | 555 | 1 | 554 | 3.3e-301 | 1043.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene055531 | MS.gene06253 | 0.951757 | 1.04E-109 | -1.69E-46 |
| MS.gene057195 | MS.gene06253 | 0.81009 | 1.37E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene27647 | MS.gene06253 | PPI |
| MS.gene06253 | MS.gene052564 | PPI |
| MS.gene023795 | MS.gene06253 | PPI |
| MS.gene52172 | MS.gene06253 | PPI |
| MS.gene052565 | MS.gene06253 | PPI |
| MS.gene33842 | MS.gene06253 | PPI |
| MS.gene57486 | MS.gene06253 | PPI |
| MS.gene019466 | MS.gene06253 | PPI |
| MS.gene42235 | MS.gene06253 | PPI |
| MS.gene06253 | MS.gene28664 | PPI |
| MS.gene06253 | MS.gene32213 | PPI |
| MS.gene06253 | MS.gene36899 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06253.t1 | MTR_3g098730 | 97.838 | 555 | 11 | 1 | 1 | 555 | 1 | 554 | 0.0 | 1104 |
| MS.gene06253.t1 | MTR_8g032570 | 35.250 | 539 | 320 | 13 | 30 | 554 | 37 | 560 | 3.09e-83 | 270 |
| MS.gene06253.t1 | MTR_8g032570 | 35.250 | 539 | 320 | 13 | 30 | 554 | 60 | 583 | 9.31e-83 | 269 |
| MS.gene06253.t1 | MTR_7g076220 | 32.963 | 540 | 333 | 10 | 30 | 554 | 34 | 559 | 1.38e-80 | 263 |
| MS.gene06253.t1 | MTR_4g091320 | 28.571 | 532 | 356 | 13 | 29 | 543 | 38 | 562 | 1.19e-44 | 166 |
| MS.gene06253.t1 | MTR_3g466220 | 32.338 | 201 | 128 | 5 | 157 | 356 | 568 | 761 | 1.01e-13 | 74.7 |
| MS.gene06253.t1 | MTR_3g466220 | 32.338 | 201 | 128 | 5 | 157 | 356 | 547 | 740 | 1.43e-13 | 74.3 |
| MS.gene06253.t1 | MTR_4g063800 | 32.558 | 215 | 139 | 4 | 139 | 351 | 348 | 558 | 3.01e-13 | 72.8 |
| MS.gene06253.t1 | MTR_7g097020 | 31.429 | 210 | 140 | 3 | 147 | 356 | 485 | 690 | 4.16e-13 | 72.8 |
| MS.gene06253.t1 | MTR_1g069845 | 31.429 | 210 | 140 | 3 | 147 | 356 | 443 | 648 | 1.79e-12 | 70.5 |
| MS.gene06253.t1 | MTR_1g069845 | 31.429 | 210 | 140 | 3 | 147 | 356 | 447 | 652 | 2.16e-12 | 70.5 |
| MS.gene06253.t1 | MTR_1g069845 | 31.429 | 210 | 140 | 3 | 147 | 356 | 326 | 531 | 3.12e-12 | 69.7 |
| MS.gene06253.t1 | MTR_4g485520 | 29.817 | 218 | 146 | 4 | 139 | 356 | 372 | 582 | 1.33e-11 | 67.8 |
| MS.gene06253.t1 | MTR_4g485520 | 29.817 | 218 | 146 | 4 | 139 | 356 | 204 | 414 | 1.42e-11 | 67.4 |
| MS.gene06253.t1 | MTR_5g083030 | 29.134 | 254 | 154 | 9 | 135 | 383 | 396 | 628 | 2.66e-11 | 66.6 |
| MS.gene06253.t1 | MTR_4g007850 | 35.043 | 117 | 74 | 2 | 419 | 533 | 380 | 496 | 5.05e-11 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06253.t1 | AT5G50900 | 58.932 | 543 | 211 | 6 | 20 | 555 | 18 | 555 | 0.0 | 619 |
| MS.gene06253.t1 | AT2G45720 | 34.457 | 534 | 325 | 12 | 29 | 554 | 36 | 552 | 2.52e-86 | 278 |
| MS.gene06253.t1 | AT2G45720 | 34.457 | 534 | 325 | 12 | 29 | 554 | 36 | 552 | 2.52e-86 | 278 |
| MS.gene06253.t1 | AT2G45720 | 34.457 | 534 | 325 | 12 | 29 | 554 | 36 | 552 | 2.52e-86 | 278 |
| MS.gene06253.t1 | AT2G45720 | 34.457 | 534 | 325 | 12 | 29 | 554 | 36 | 552 | 2.52e-86 | 278 |
| MS.gene06253.t1 | AT2G45720 | 34.457 | 534 | 325 | 12 | 29 | 554 | 36 | 552 | 2.52e-86 | 278 |
| MS.gene06253.t1 | AT1G01830 | 34.470 | 557 | 329 | 17 | 16 | 554 | 36 | 574 | 1.23e-70 | 237 |
| MS.gene06253.t1 | AT1G01830 | 34.470 | 557 | 329 | 17 | 16 | 554 | 36 | 574 | 1.23e-70 | 237 |
| MS.gene06253.t1 | AT1G01830 | 34.470 | 557 | 329 | 17 | 16 | 554 | 36 | 574 | 1.23e-70 | 237 |
| MS.gene06253.t1 | AT1G61350 | 27.206 | 544 | 364 | 14 | 33 | 553 | 34 | 568 | 1.46e-45 | 169 |
| MS.gene06253.t1 | AT2G05810 | 28.425 | 489 | 328 | 10 | 84 | 555 | 93 | 576 | 4.18e-39 | 151 |
| MS.gene06253.t1 | AT2G05810 | 28.425 | 489 | 328 | 10 | 84 | 555 | 93 | 576 | 4.18e-39 | 151 |
| MS.gene06253.t1 | AT1G23030 | 30.939 | 181 | 123 | 1 | 142 | 322 | 331 | 509 | 8.36e-13 | 71.6 |
| MS.gene06253.t1 | AT2G23140 | 28.571 | 217 | 151 | 3 | 140 | 356 | 542 | 754 | 8.13e-12 | 68.6 |
| MS.gene06253.t1 | AT2G23140 | 28.571 | 217 | 151 | 3 | 140 | 356 | 539 | 751 | 8.70e-12 | 68.6 |
| MS.gene06253.t1 | AT2G23140 | 28.571 | 217 | 151 | 3 | 140 | 356 | 539 | 751 | 8.70e-12 | 68.6 |
| MS.gene06253.t1 | AT2G23140 | 28.571 | 217 | 151 | 3 | 140 | 356 | 350 | 562 | 2.44e-11 | 67.0 |
| MS.gene06253.t1 | AT2G23140 | 28.571 | 217 | 151 | 3 | 140 | 356 | 350 | 562 | 2.44e-11 | 67.0 |
Find 167 sgRNAs with CRISPR-Local
Find 203 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTTACCGTGGGGTAAAATT+TGG | 0.152310 | 3.1:-78681185 | None:intergenic |
| GAATCATTTGGTTAGGGTTT+TGG | 0.180873 | 3.1:+78681599 | MS.gene06253:CDS |
| GAACCCTGCTTTGGTTAATT+TGG | 0.181771 | 3.1:+78682373 | MS.gene06253:CDS |
| GGTTGAAATGTTGAGGTATT+TGG | 0.223216 | 3.1:+78682028 | MS.gene06253:CDS |
| GGCTAAGTTTAATGAAATTA+AGG | 0.251879 | 3.1:+78681797 | MS.gene06253:CDS |
| TTGAGTGTTTGAAGAATTAT+TGG | 0.266104 | 3.1:+78681970 | MS.gene06253:CDS |
| GCTTGTTGAGTTGGATATTC+CGG | 0.273134 | 3.1:+78682493 | MS.gene06253:CDS |
| GAAATACCCTGTTTCGGTTC+TGG | 0.283357 | 3.1:+78682400 | MS.gene06253:CDS |
| ATTGCAGTGGCGCGTGATTC+TGG | 0.283476 | 3.1:-78681378 | None:intergenic |
| AGAAATCGGTGAGGTGGTTT+TGG | 0.290234 | 3.1:-78681053 | None:intergenic |
| TGAGTTGGTGGTGGAGGATT+TGG | 0.294911 | 3.1:-78681088 | None:intergenic |
| GAAAGCTTGTATTGCGCTTC+AGG | 0.297814 | 3.1:+78681647 | MS.gene06253:CDS |
| CTTTCAATAGAAGGATCTTT+AGG | 0.301417 | 3.1:+78682312 | MS.gene06253:CDS |
| GACTTGGTCGTGGTAAGATT+TGG | 0.304663 | 3.1:+78682537 | MS.gene06253:CDS |
| GGGTTGGCTTCGTCTGGAAC+GGG | 0.312249 | 3.1:+78681858 | MS.gene06253:CDS |
| AATCGATTTGGCTTTGAGTT+TGG | 0.314588 | 3.1:-78681209 | None:intergenic |
| GGGTTTGTTGGGAGGGTGAT+TGG | 0.317282 | 3.1:+78682089 | MS.gene06253:CDS |
| ACTTGGTCGTGGTAAGATTT+GGG | 0.323155 | 3.1:+78682538 | MS.gene06253:CDS |
| TGCAGCACCCTTTCAATAGA+AGG | 0.329460 | 3.1:+78682303 | MS.gene06253:CDS |
| AGATCGAACGGCTTCACGTT+TGG | 0.340147 | 3.1:-78681316 | None:intergenic |
| GGATGAGAGTATGAGGGTTT+TGG | 0.343750 | 3.1:+78681929 | MS.gene06253:CDS |
| TGTTGTTGAATCATTTGGTT+AGG | 0.343807 | 3.1:+78681592 | MS.gene06253:CDS |
| TTGTTAGGGTTGGCTTCGTC+TGG | 0.344793 | 3.1:+78681852 | MS.gene06253:CDS |
| GGATGGAGTGGAGGAGGTGA+AGG | 0.346870 | 3.1:-78681116 | None:intergenic |
| AAACGGCGTCGTTGAGGGTT+TGG | 0.352514 | 3.1:-78681140 | None:intergenic |
| GTTGTTGTTGTTGAATCATT+TGG | 0.357475 | 3.1:+78681587 | MS.gene06253:CDS |
| GGTGGAATTTCGTCTCTGTT+AGG | 0.358232 | 3.1:+78681714 | MS.gene06253:CDS |
| TTTACCGTGGGGTAAAATTT+GGG | 0.360306 | 3.1:-78681184 | None:intergenic |
| GACTCCGAAGATTGACCATT+TGG | 0.363460 | 3.1:-78681016 | None:intergenic |
| CTTGTTGAGTTGGATATTCC+GGG | 0.366525 | 3.1:+78682494 | MS.gene06253:CDS |
| TGGTGAAGGGTTTGTTGGGA+GGG | 0.366712 | 3.1:+78682082 | MS.gene06253:CDS |
| TAACCAAAGCAGGGTTCAAT+AGG | 0.373568 | 3.1:-78682367 | None:intergenic |
| AGTGAAACCAGAACCGAAAC+AGG | 0.386932 | 3.1:-78682407 | None:intergenic |
| AGGTTCAGACAAACGCTGAT+AGG | 0.387176 | 3.1:-78680943 | None:intergenic |
| AGGGTTGGCTTCGTCTGGAA+CGG | 0.394672 | 3.1:+78681857 | MS.gene06253:CDS |
| TGCGAGGGCTGTTTATGCTA+TGG | 0.395074 | 3.1:+78682151 | MS.gene06253:CDS |
| TTTGAAGAATTATTGGGATT+CGG | 0.396056 | 3.1:+78681977 | MS.gene06253:CDS |
| CCAACTAAAACCTCATCAAT+TGG | 0.397057 | 3.1:-78682062 | None:intergenic |
| TTAGTTGGTGAAGGGTTTGT+TGG | 0.400245 | 3.1:+78682077 | MS.gene06253:CDS |
| TCACCTATTGAACCCTGCTT+TGG | 0.400666 | 3.1:+78682364 | MS.gene06253:CDS |
| GGAGAGTGAGTTGGTGGTGG+AGG | 0.401750 | 3.1:-78681094 | None:intergenic |
| TAGTTGGTGAAGGGTTTGTT+GGG | 0.401880 | 3.1:+78682078 | MS.gene06253:CDS |
| TGGCGATAAGTGAATCGATT+TGG | 0.404988 | 3.1:-78681221 | None:intergenic |
| CGGAAACAAATGGTGGCTGC+TGG | 0.406988 | 3.1:+78682449 | MS.gene06253:CDS |
| GGATAAGAAATACCCTGTTT+CGG | 0.411451 | 3.1:+78682394 | MS.gene06253:CDS |
| TTGTGTGGCAAATTTGATTT+CGG | 0.412915 | 3.1:+78681905 | MS.gene06253:CDS |
| AAGGGAGAGTGAGTTGGTGG+TGG | 0.415218 | 3.1:-78681097 | None:intergenic |
| GCGAGGGCTGTTTATGCTAT+GGG | 0.416753 | 3.1:+78682152 | MS.gene06253:CDS |
| AAATAAGACGAGAAAGGAAA+TGG | 0.420093 | 3.1:+78682187 | MS.gene06253:CDS |
| GGCTTCGTCTGGAACGGGGT+TGG | 0.420511 | 3.1:+78681863 | MS.gene06253:CDS |
| TCCTTCTTTGATTAAGATGT+TGG | 0.421703 | 3.1:+78682226 | MS.gene06253:CDS |
| AGAAATTCATTTCATGATGA+AGG | 0.422434 | 3.1:+78680900 | None:intergenic |
| GTGTAGTTCCGGTGCTGGTT+CGG | 0.423585 | 3.1:+78681463 | MS.gene06253:CDS |
| TTATCCAAATTAACCAAAGC+AGG | 0.430725 | 3.1:-78682377 | None:intergenic |
| TTTCGGAGGATGAGAGTATG+AGG | 0.432008 | 3.1:+78681922 | MS.gene06253:CDS |
| CTCATCGCACGGTTGCAAAT+CGG | 0.432560 | 3.1:+78681351 | MS.gene06253:CDS |
| CTCCTTCATATCAGAGGAGC+TGG | 0.435157 | 3.1:-78681496 | None:intergenic |
| GTGGAATTTCGTCTCTGTTA+GGG | 0.438416 | 3.1:+78681715 | MS.gene06253:CDS |
| GCAAGGTGTAGTTCCGGTGC+TGG | 0.439174 | 3.1:+78681458 | MS.gene06253:CDS |
| GTTTATGCTATGGGTTTGAA+TGG | 0.440282 | 3.1:+78682161 | MS.gene06253:CDS |
| GGAATATTCAGTGGAGAAAT+CGG | 0.443636 | 3.1:-78681067 | None:intergenic |
| GGTTCAAAGAAATTGTTAGA+TGG | 0.449366 | 3.1:+78682515 | MS.gene06253:CDS |
| GAGTGAAACGGCGTCGTTGA+GGG | 0.451125 | 3.1:-78681145 | None:intergenic |
| TTGGTGAAGGGTTTGTTGGG+AGG | 0.455506 | 3.1:+78682081 | MS.gene06253:CDS |
| AAGAAATTGTTAGATGGACT+TGG | 0.456660 | 3.1:+78682521 | MS.gene06253:CDS |
| TTTGGAGGATGGAGTGGAGG+AGG | 0.460053 | 3.1:-78681122 | None:intergenic |
| TAAAGATCCTTCTATTGAAA+GGG | 0.462836 | 3.1:-78682310 | None:intergenic |
| CTAAAGATCCTTCTATTGAA+AGG | 0.463381 | 3.1:-78682311 | None:intergenic |
| GTTGTTGAATCATTTGGTTA+GGG | 0.469282 | 3.1:+78681593 | MS.gene06253:CDS |
| GTGAAGGGAGAGTGAGTTGG+TGG | 0.471053 | 3.1:-78681100 | None:intergenic |
| CGCAGTCGGTGACGTGGCGG+TGG | 0.472374 | 3.1:-78681248 | None:intergenic |
| TACGCAGAAGCTTGTTGAGT+TGG | 0.472425 | 3.1:+78682484 | MS.gene06253:CDS |
| AATAAGACGAGAAAGGAAAT+GGG | 0.475260 | 3.1:+78682188 | MS.gene06253:CDS |
| AAAACCAAATGGTCAATCTT+CGG | 0.476063 | 3.1:+78681012 | MS.gene06253:CDS |
| GTCGTTGAGGGTTTGGAGGA+TGG | 0.478197 | 3.1:-78681133 | None:intergenic |
| CGGCGTCGTTGAGGGTTTGG+AGG | 0.482940 | 3.1:-78681137 | None:intergenic |
| TCTTTGATTAAGATGTTGGA+TGG | 0.483116 | 3.1:+78682230 | MS.gene06253:CDS |
| GGTGAGGATTGCGGCTGCGA+GGG | 0.490524 | 3.1:+78682136 | MS.gene06253:CDS |
| TGAGTGTTTGAAGAATTATT+GGG | 0.492153 | 3.1:+78681971 | MS.gene06253:CDS |
| TGATTCAGAGTCTTGAAGTA+GGG | 0.493354 | 3.1:+78682006 | MS.gene06253:CDS |
| TCCAACATCTTAATCAAAGA+AGG | 0.499119 | 3.1:-78682227 | None:intergenic |
| GGAAACAAATGGTGGCTGCT+GGG | 0.501374 | 3.1:+78682450 | MS.gene06253:CDS |
| TGAGGGTTTGGAGGATGGAG+TGG | 0.501954 | 3.1:-78681128 | None:intergenic |
| AGGGACAATGCTAGAGCGAT+TGG | 0.504635 | 3.1:+78681684 | MS.gene06253:CDS |
| GGGTTTGGAGGATGGAGTGG+AGG | 0.505537 | 3.1:-78681125 | None:intergenic |
| GATGGAGTGGAGGAGGTGAA+GGG | 0.509401 | 3.1:-78681115 | None:intergenic |
| TTGTTAGATGGACTTGGTCG+TGG | 0.511994 | 3.1:+78682527 | MS.gene06253:CDS |
| TTCCAGCTCCTCTGATATGA+AGG | 0.514211 | 3.1:+78681494 | MS.gene06253:CDS |
| TTTCGAGGAGGAGGCCGCTA+CGG | 0.514584 | 3.1:-78681281 | None:intergenic |
| GCTGCATAACCTTGTGAACC+TGG | 0.516453 | 3.1:-78681756 | None:intergenic |
| GCTTCACGTTTGGAGAAAGC+GGG | 0.517549 | 3.1:-78681306 | None:intergenic |
| TGCTATTTCGAGAGTTTCCA+CGG | 0.517769 | 3.1:+78681530 | MS.gene06253:CDS |
| GAGGTGAAGGGAGAGTGAGT+TGG | 0.520380 | 3.1:-78681103 | None:intergenic |
| ATTAAGATGTTGGATGGGAA+AGG | 0.520569 | 3.1:+78682236 | MS.gene06253:CDS |
| TTCAGGCGTTGAGTTTGACT+AGG | 0.520825 | 3.1:+78681664 | MS.gene06253:CDS |
| CGTCGCGCAAGGTGTAGTTC+CGG | 0.521124 | 3.1:+78681452 | MS.gene06253:CDS |
| ATTTGTCAAGGCGGAACACC+AGG | 0.523455 | 3.1:+78681738 | MS.gene06253:CDS |
| GGTGACGTGGCGGTGGAGAG+TGG | 0.523638 | 3.1:-78681241 | None:intergenic |
| GAAGACTTGTCGGAAACAAA+TGG | 0.525091 | 3.1:+78682439 | MS.gene06253:CDS |
| TCTAACAATTTCTTTGAACC+CGG | 0.526693 | 3.1:-78682512 | None:intergenic |
| GGATCTTTAGGAAGGATGAG+AGG | 0.530549 | 3.1:+78682324 | MS.gene06253:CDS |
| ATGATTCAGAGTCTTGAAGT+AGG | 0.530753 | 3.1:+78682005 | MS.gene06253:CDS |
| GGCTTCACGTTTGGAGAAAG+CGG | 0.535924 | 3.1:-78681307 | None:intergenic |
| TTCGGAGGATGAGAGTATGA+GGG | 0.538974 | 3.1:+78681923 | MS.gene06253:CDS |
| CTTTGATTAAGATGTTGGAT+GGG | 0.539664 | 3.1:+78682231 | MS.gene06253:CDS |
| GATCTTTAGGAAGGATGAGA+GGG | 0.541790 | 3.1:+78682325 | MS.gene06253:CDS |
| CTTGGTCGTGGTAAGATTTG+GGG | 0.544253 | 3.1:+78682539 | MS.gene06253:CDS |
| TTGAGGTATTTGGCTATGAC+TGG | 0.545352 | 3.1:+78682038 | MS.gene06253:CDS |
| TTGAGTTTGGAGTTTACCGT+GGG | 0.545419 | 3.1:-78681196 | None:intergenic |
| GAAACAAATGGTGGCTGCTG+GGG | 0.546643 | 3.1:+78682451 | MS.gene06253:CDS |
| CAATAGAAGGATCTTTAGGA+AGG | 0.547514 | 3.1:+78682316 | MS.gene06253:CDS |
| AAGTAGGGGTTGAAATGTTG+AGG | 0.549591 | 3.1:+78682021 | MS.gene06253:CDS |
| AAGAATAATTTACTTGCGGA+GGG | 0.550763 | 3.1:+78681564 | MS.gene06253:CDS |
| CGGTGAGGATTGCGGCTGCG+AGG | 0.553805 | 3.1:+78682135 | MS.gene06253:CDS |
| TCGAGTAACCGAACCAGCAC+CGG | 0.554153 | 3.1:-78681471 | None:intergenic |
| ATCTTTAGGAAGGATGAGAG+GGG | 0.554644 | 3.1:+78682326 | MS.gene06253:CDS |
| TCAGGCGTTGAGTTTGACTA+GGG | 0.566469 | 3.1:+78681665 | MS.gene06253:CDS |
| GGAGAAAGAATCTGCTGCAA+TGG | 0.567130 | 3.1:+78682265 | MS.gene06253:CDS |
| AGAGTTTCCACGGTGGAGAG+TGG | 0.573107 | 3.1:+78681540 | MS.gene06253:CDS |
| GGTTCAGACAAACGCTGATA+GGG | 0.573193 | 3.1:-78680942 | None:intergenic |
| GAGTTTCCACGGTGGAGAGT+GGG | 0.574172 | 3.1:+78681541 | MS.gene06253:CDS |
| TTGGCGCGAGAAAATGCGAT+TGG | 0.575936 | 3.1:+78681882 | MS.gene06253:CDS |
| TATCCAAATTAACCAAAGCA+GGG | 0.575946 | 3.1:-78682376 | None:intergenic |
| ATTTCTCGTTAGAGATCGAA+CGG | 0.576485 | 3.1:-78681328 | None:intergenic |
| TGGCGGAAATAAGACGAGAA+AGG | 0.576753 | 3.1:+78682181 | MS.gene06253:CDS |
| TTTCTATGAGTGAATTGGTG+AGG | 0.582509 | 3.1:-78680963 | None:intergenic |
| GGAGGATTTGGAATATTCAG+TGG | 0.587898 | 3.1:-78681076 | None:intergenic |
| GGTTGGCTTCGTCTGGAACG+GGG | 0.590269 | 3.1:+78681859 | MS.gene06253:CDS |
| TTTGAGTTTGGAGTTTACCG+TGG | 0.593684 | 3.1:-78681197 | None:intergenic |
| GAAGAATAATTTACTTGCGG+AGG | 0.596771 | 3.1:+78681563 | MS.gene06253:CDS |
| GATGTTGGATGGGAAAGGCG+TGG | 0.603804 | 3.1:+78682241 | MS.gene06253:CDS |
| TCTCTGTTAGGGATTTGTCA+AGG | 0.604955 | 3.1:+78681726 | MS.gene06253:CDS |
| GGCGGAACACCAGGTTCACA+AGG | 0.606227 | 3.1:+78681747 | MS.gene06253:CDS |
| GTAAAATTTGGGATTGACAG+TGG | 0.606793 | 3.1:-78681173 | None:intergenic |
| ATAAGACGAGAAAGGAAATG+GGG | 0.610635 | 3.1:+78682189 | MS.gene06253:CDS |
| CTTCACGTTTGGAGAAAGCG+GGG | 0.611057 | 3.1:-78681305 | None:intergenic |
| TAAGACGAGAAAGGAAATGG+GGG | 0.612886 | 3.1:+78682190 | MS.gene06253:CDS |
| TTCACAAGGTTATGCAGCAG+CGG | 0.614157 | 3.1:+78681761 | MS.gene06253:CDS |
| CAGTGGAGAAATCGGTGAGG+TGG | 0.614649 | 3.1:-78681059 | None:intergenic |
| GATTCAGAGTCTTGAAGTAG+GGG | 0.614676 | 3.1:+78682007 | MS.gene06253:CDS |
| TGGGAAGAATAATTTACTTG+CGG | 0.619324 | 3.1:+78681560 | MS.gene06253:CDS |
| AGAAAATGCGATTGGTTGTG+TGG | 0.624806 | 3.1:+78681890 | MS.gene06253:CDS |
| CGGAACTACACCTTGCGCGA+CGG | 0.625906 | 3.1:-78681451 | None:intergenic |
| GTTACAATAGCCGTCGCGCA+AGG | 0.626258 | 3.1:+78681441 | MS.gene06253:CDS |
| TGTGGCAAATTTGATTTCGG+AGG | 0.627323 | 3.1:+78681908 | MS.gene06253:CDS |
| AGAGTGAAACGGCGTCGTTG+AGG | 0.630604 | 3.1:-78681146 | None:intergenic |
| GCTAGAGCGATTGGATCTAG+AGG | 0.633516 | 3.1:+78681693 | MS.gene06253:CDS |
| AGAATAATTTACTTGCGGAG+GGG | 0.633658 | 3.1:+78681565 | MS.gene06253:CDS |
| TATGCTATGGGTTTGAATGG+CGG | 0.640687 | 3.1:+78682164 | MS.gene06253:CDS |
| GTTGGATGGGAAAGGCGTGG+AGG | 0.641910 | 3.1:+78682244 | MS.gene06253:CDS |
| GAACATCGCAGTCGGTGACG+TGG | 0.642100 | 3.1:-78681254 | None:intergenic |
| TTCACGTTTGGAGAAAGCGG+GGG | 0.645949 | 3.1:-78681304 | None:intergenic |
| TAACGAGAAATCTCATCGCA+CGG | 0.653102 | 3.1:+78681340 | MS.gene06253:CDS |
| AGAGCGATTGGATCTAGAGG+TGG | 0.653759 | 3.1:+78681696 | MS.gene06253:CDS |
| TATGACTGGTCCAATTGATG+AGG | 0.665742 | 3.1:+78682052 | MS.gene06253:CDS |
| ACGGAAGAGAACATCGCAGT+CGG | 0.666690 | 3.1:-78681262 | None:intergenic |
| TAAGAGTGAGTCGATTGCAG+TGG | 0.671105 | 3.1:-78681391 | None:intergenic |
| GACTTGTCGGAAACAAATGG+TGG | 0.684138 | 3.1:+78682442 | MS.gene06253:CDS |
| GTGAAACCAGAACCGAAACA+GGG | 0.684741 | 3.1:-78682406 | None:intergenic |
| CATCGCAGTCGGTGACGTGG+CGG | 0.687454 | 3.1:-78681251 | None:intergenic |
| ACAGTGGTGAGAGAGTGAAA+CGG | 0.701293 | 3.1:-78681157 | None:intergenic |
| ATTCTTCCCACTCTCCACCG+TGG | 0.707457 | 3.1:-78681547 | None:intergenic |
| TGCGATGTTCTCTTCCGTAG+CGG | 0.716213 | 3.1:+78681267 | MS.gene06253:CDS |
| CTGTTAGGGATTTGTCAAGG+CGG | 0.747669 | 3.1:+78681729 | MS.gene06253:CDS |
| TGAGTTTGGAGTTTACCGTG+GGG | 0.758546 | 3.1:-78681195 | None:intergenic |
| ATTCAGTGGAGAAATCGGTG+AGG | 0.771367 | 3.1:-78681062 | None:intergenic |
| TATTTCGAGAGTTTCCACGG+TGG | 0.826858 | 3.1:+78681533 | MS.gene06253:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | GGCTAAGTTTAATGAAATTA+AGG | + | chr3.1:78681797-78681816 | MS.gene06253:CDS | 25.0% |
| ! | TAAAGATCCTTCTATTGAAA+GGG | - | chr3.1:78682313-78682332 | None:intergenic | 25.0% |
| ! | TGAGTGTTTGAAGAATTATT+GGG | + | chr3.1:78681971-78681990 | MS.gene06253:CDS | 25.0% |
| ! | TTGAGTGTTTGAAGAATTAT+TGG | + | chr3.1:78681970-78681989 | MS.gene06253:CDS | 25.0% |
| ! | TTTGAAGAATTATTGGGATT+CGG | + | chr3.1:78681977-78681996 | MS.gene06253:CDS | 25.0% |
| !! | TGAAATTAAGGAGAATTTTG+TGG | + | chr3.1:78681809-78681828 | MS.gene06253:CDS | 25.0% |
| AAAACCAAATGGTCAATCTT+CGG | + | chr3.1:78681012-78681031 | MS.gene06253:CDS | 30.0% | |
| AAATAAGACGAGAAAGGAAA+TGG | + | chr3.1:78682187-78682206 | MS.gene06253:CDS | 30.0% | |
| AAGAATAATTTACTTGCGGA+GGG | + | chr3.1:78681564-78681583 | MS.gene06253:CDS | 30.0% | |
| AATAAGACGAGAAAGGAAAT+GGG | + | chr3.1:78682188-78682207 | MS.gene06253:CDS | 30.0% | |
| CTAAAGATCCTTCTATTGAA+AGG | - | chr3.1:78682314-78682333 | None:intergenic | 30.0% | |
| CTTTCAATAGAAGGATCTTT+AGG | + | chr3.1:78682312-78682331 | MS.gene06253:CDS | 30.0% | |
| CTTTGATTAAGATGTTGGAT+GGG | + | chr3.1:78682231-78682250 | MS.gene06253:CDS | 30.0% | |
| GGTTCAAAGAAATTGTTAGA+TGG | + | chr3.1:78682515-78682534 | MS.gene06253:CDS | 30.0% | |
| GTTGTTGAATCATTTGGTTA+GGG | + | chr3.1:78681593-78681612 | MS.gene06253:CDS | 30.0% | |
| TATCCAAATTAACCAAAGCA+GGG | - | chr3.1:78682379-78682398 | None:intergenic | 30.0% | |
| TCCAACATCTTAATCAAAGA+AGG | - | chr3.1:78682230-78682249 | None:intergenic | 30.0% | |
| TCCATCACTTAAAAACCAAA+TGG | + | chr3.1:78681001-78681020 | MS.gene06253:CDS | 30.0% | |
| TCCTTCTTTGATTAAGATGT+TGG | + | chr3.1:78682226-78682245 | MS.gene06253:CDS | 30.0% | |
| TCTAACAATTTCTTTGAACC+CGG | - | chr3.1:78682515-78682534 | None:intergenic | 30.0% | |
| TCTTTGATTAAGATGTTGGA+TGG | + | chr3.1:78682230-78682249 | MS.gene06253:CDS | 30.0% | |
| TGGGAAGAATAATTTACTTG+CGG | + | chr3.1:78681560-78681579 | MS.gene06253:CDS | 30.0% | |
| TGTTGTTGAATCATTTGGTT+AGG | + | chr3.1:78681592-78681611 | MS.gene06253:CDS | 30.0% | |
| TTATCCAAATTAACCAAAGC+AGG | - | chr3.1:78682380-78682399 | None:intergenic | 30.0% | |
| ! | AAGAAATTGTTAGATGGACT+TGG | + | chr3.1:78682521-78682540 | MS.gene06253:CDS | 30.0% |
| ! | AATTAAGGAGAATTTTGTGG+AGG | + | chr3.1:78681812-78681831 | MS.gene06253:CDS | 30.0% |
| ! | GTTGTTGTTGTTGAATCATT+TGG | + | chr3.1:78681587-78681606 | MS.gene06253:CDS | 30.0% |
| ! | TTCGTTTTCTATGAGTGAAT+TGG | - | chr3.1:78680971-78680990 | None:intergenic | 30.0% |
| ! | TTGTGTGGCAAATTTGATTT+CGG | + | chr3.1:78681905-78681924 | MS.gene06253:CDS | 30.0% |
| !! | AATGCGGTTATTGTTTTGTT+AGG | + | chr3.1:78681837-78681856 | MS.gene06253:CDS | 30.0% |
| !! | ATGCGGTTATTGTTTTGTTA+GGG | + | chr3.1:78681838-78681857 | MS.gene06253:CDS | 30.0% |
| !! | GTTGAACTGTGATGTTTTAA+CGG | + | chr3.1:78682115-78682134 | MS.gene06253:CDS | 30.0% |
| !!! | ACCATTTGGTTTTTAAGTGA+TGG | - | chr3.1:78681005-78681024 | None:intergenic | 30.0% |
| !!! | TTTGGTTTTTAAGTGATGGA+CGG | - | chr3.1:78681001-78681020 | None:intergenic | 30.0% |
| AGAATAATTTACTTGCGGAG+GGG | + | chr3.1:78681565-78681584 | MS.gene06253:CDS | 35.0% | |
| ATAAGACGAGAAAGGAAATG+GGG | + | chr3.1:78682189-78682208 | MS.gene06253:CDS | 35.0% | |
| ATGATTCAGAGTCTTGAAGT+AGG | + | chr3.1:78682005-78682024 | MS.gene06253:CDS | 35.0% | |
| ATTAAGATGTTGGATGGGAA+AGG | + | chr3.1:78682236-78682255 | MS.gene06253:CDS | 35.0% | |
| ATTTCTCGTTAGAGATCGAA+CGG | - | chr3.1:78681331-78681350 | None:intergenic | 35.0% | |
| CCAACTAAAACCTCATCAAT+TGG | - | chr3.1:78682065-78682084 | None:intergenic | 35.0% | |
| GAAGAATAATTTACTTGCGG+AGG | + | chr3.1:78681563-78681582 | MS.gene06253:CDS | 35.0% | |
| GGAATATTCAGTGGAGAAAT+CGG | - | chr3.1:78681070-78681089 | None:intergenic | 35.0% | |
| GGATAAGAAATACCCTGTTT+CGG | + | chr3.1:78682394-78682413 | MS.gene06253:CDS | 35.0% | |
| GTTTATGCTATGGGTTTGAA+TGG | + | chr3.1:78682161-78682180 | MS.gene06253:CDS | 35.0% | |
| TGATTCAGAGTCTTGAAGTA+GGG | + | chr3.1:78682006-78682025 | MS.gene06253:CDS | 35.0% | |
| TTTACCGTGGGGTAAAATTT+GGG | - | chr3.1:78681187-78681206 | None:intergenic | 35.0% | |
| TTTCTATGAGTGAATTGGTG+AGG | - | chr3.1:78680966-78680985 | None:intergenic | 35.0% | |
| ! | CAATAGAAGGATCTTTAGGA+AGG | + | chr3.1:78682316-78682335 | MS.gene06253:CDS | 35.0% |
| ! | GAATCATTTGGTTAGGGTTT+TGG | + | chr3.1:78681599-78681618 | MS.gene06253:CDS | 35.0% |
| ! | GGTTGAAATGTTGAGGTATT+TGG | + | chr3.1:78682028-78682047 | MS.gene06253:CDS | 35.0% |
| ! | GTAAAATTTGGGATTGACAG+TGG | - | chr3.1:78681176-78681195 | None:intergenic | 35.0% |
| ! | TGTTTTCTCCTTCATATCAG+AGG | - | chr3.1:78681505-78681524 | None:intergenic | 35.0% |
| ! | TTTTGCATTCGAAGACTTGT+CGG | + | chr3.1:78682429-78682448 | MS.gene06253:CDS | 35.0% |
| !! | AATCGATTTGGCTTTGAGTT+TGG | - | chr3.1:78681212-78681231 | None:intergenic | 35.0% |
| !! | CCAATTGATGAGGTTTTAGT+TGG | + | chr3.1:78682062-78682081 | MS.gene06253:CDS | 35.0% |
| !! | GGTTATTGTTTTGTTAGGGT+TGG | + | chr3.1:78681842-78681861 | MS.gene06253:CDS | 35.0% |
| !!! | ATGAGGTTTTAGTTGGTGAA+GGG | + | chr3.1:78682069-78682088 | MS.gene06253:CDS | 35.0% |
| !!! | TTTGGTTAGGGTTTTGGATT+CGG | + | chr3.1:78681605-78681624 | MS.gene06253:CDS | 35.0% |
| AAGTAGGGGTTGAAATGTTG+AGG | + | chr3.1:78682021-78682040 | MS.gene06253:CDS | 40.0% | |
| ACTTGGTCGTGGTAAGATTT+GGG | + | chr3.1:78682538-78682557 | MS.gene06253:CDS | 40.0% | |
| GAACCCTGCTTTGGTTAATT+TGG | + | chr3.1:78682373-78682392 | MS.gene06253:CDS | 40.0% | |
| GAAGACTTGTCGGAAACAAA+TGG | + | chr3.1:78682439-78682458 | MS.gene06253:CDS | 40.0% | |
| GATTCAGAGTCTTGAAGTAG+GGG | + | chr3.1:78682007-78682026 | MS.gene06253:CDS | 40.0% | |
| GTGGAATTTCGTCTCTGTTA+GGG | + | chr3.1:78681715-78681734 | MS.gene06253:CDS | 40.0% | |
| GTTTACCGTGGGGTAAAATT+TGG | - | chr3.1:78681188-78681207 | None:intergenic | 40.0% | |
| TAACCAAAGCAGGGTTCAAT+AGG | - | chr3.1:78682370-78682389 | None:intergenic | 40.0% | |
| TAACGAGAAATCTCATCGCA+CGG | + | chr3.1:78681340-78681359 | MS.gene06253:CDS | 40.0% | |
| TAAGACGAGAAAGGAAATGG+GGG | + | chr3.1:78682190-78682209 | MS.gene06253:CDS | 40.0% | |
| TATGCTATGGGTTTGAATGG+CGG | + | chr3.1:78682164-78682183 | MS.gene06253:CDS | 40.0% | |
| TCTCTGTTAGGGATTTGTCA+AGG | + | chr3.1:78681726-78681745 | MS.gene06253:CDS | 40.0% | |
| TGGCGATAAGTGAATCGATT+TGG | - | chr3.1:78681224-78681243 | None:intergenic | 40.0% | |
| ! | AGAAAATGCGATTGGTTGTG+TGG | + | chr3.1:78681890-78681909 | MS.gene06253:CDS | 40.0% |
| ! | ATCTTTAGGAAGGATGAGAG+GGG | + | chr3.1:78682326-78682345 | MS.gene06253:CDS | 40.0% |
| ! | CAATCCCAAATTTTACCCCA+CGG | + | chr3.1:78681180-78681199 | MS.gene06253:CDS | 40.0% |
| ! | GAATTTTGTGGAGGAGAATG+CGG | + | chr3.1:78681821-78681840 | MS.gene06253:CDS | 40.0% |
| ! | GATCTTTAGGAAGGATGAGA+GGG | + | chr3.1:78682325-78682344 | MS.gene06253:CDS | 40.0% |
| ! | GGAGGATTTGGAATATTCAG+TGG | - | chr3.1:78681079-78681098 | None:intergenic | 40.0% |
| ! | TATGACTGGTCCAATTGATG+AGG | + | chr3.1:78682052-78682071 | MS.gene06253:CDS | 40.0% |
| ! | TGTGGCAAATTTGATTTCGG+AGG | + | chr3.1:78681908-78681927 | MS.gene06253:CDS | 40.0% |
| ! | TTGAGGTATTTGGCTATGAC+TGG | + | chr3.1:78682038-78682057 | MS.gene06253:CDS | 40.0% |
| ! | TTGAGTTTGGAGTTTACCGT+GGG | - | chr3.1:78681199-78681218 | None:intergenic | 40.0% |
| ! | TTTGAGTTTGGAGTTTACCG+TGG | - | chr3.1:78681200-78681219 | None:intergenic | 40.0% |
| !! | CTTGTTGAGTTGGATATTCC+GGG | + | chr3.1:78682494-78682513 | MS.gene06253:CDS | 40.0% |
| !! | GCTTGTTGAGTTGGATATTC+CGG | + | chr3.1:78682493-78682512 | MS.gene06253:CDS | 40.0% |
| !! | TAGTTGGTGAAGGGTTTGTT+GGG | + | chr3.1:78682078-78682097 | MS.gene06253:CDS | 40.0% |
| !! | TGCTATTTCGAGAGTTTCCA+CGG | + | chr3.1:78681530-78681549 | MS.gene06253:CDS | 40.0% |
| !! | TTAGTTGGTGAAGGGTTTGT+TGG | + | chr3.1:78682077-78682096 | MS.gene06253:CDS | 40.0% |
| !!! | ACTGTGATGTTTTAACGGTG+AGG | + | chr3.1:78682120-78682139 | MS.gene06253:CDS | 40.0% |
| !!! | GATGAGGTTTTAGTTGGTGA+AGG | + | chr3.1:78682068-78682087 | MS.gene06253:CDS | 40.0% |
| !!! | GTTTTTAAGTGATGGACGGT+GGG | - | chr3.1:78680997-78681016 | None:intergenic | 40.0% |
| !!! | TGTTTTAACGGTGAGGATTG+CGG | + | chr3.1:78682127-78682146 | MS.gene06253:CDS | 40.0% |
| !!! | TTGGTTAGGGTTTTGGATTC+GGG | + | chr3.1:78681606-78681625 | MS.gene06253:CDS | 40.0% |
| !!! | TTTTTAAGTGATGGACGGTG+GGG | - | chr3.1:78680996-78681015 | None:intergenic | 40.0% |
| ACAGTGGTGAGAGAGTGAAA+CGG | - | chr3.1:78681160-78681179 | None:intergenic | 45.0% | |
| AGAAAGGAAATGGGGGAATG+TGG | + | chr3.1:78682197-78682216 | MS.gene06253:CDS | 45.0% | |
| AGGTTCAGACAAACGCTGAT+AGG | - | chr3.1:78680946-78680965 | None:intergenic | 45.0% | |
| AGTGAAACCAGAACCGAAAC+AGG | - | chr3.1:78682410-78682429 | None:intergenic | 45.0% | |
| ATTCAGTGGAGAAATCGGTG+AGG | - | chr3.1:78681065-78681084 | None:intergenic | 45.0% | |
| CTGTTAGGGATTTGTCAAGG+CGG | + | chr3.1:78681729-78681748 | MS.gene06253:CDS | 45.0% | |
| CTTGGTCGTGGTAAGATTTG+GGG | + | chr3.1:78682539-78682558 | MS.gene06253:CDS | 45.0% | |
| GAAAGCTTGTATTGCGCTTC+AGG | + | chr3.1:78681647-78681666 | MS.gene06253:CDS | 45.0% | |
| GAAAGGAAATGGGGGAATGT+GGG | + | chr3.1:78682198-78682217 | MS.gene06253:CDS | 45.0% | |
| GAAATACCCTGTTTCGGTTC+TGG | + | chr3.1:78682400-78682419 | MS.gene06253:CDS | 45.0% | |
| GACTCCGAAGATTGACCATT+TGG | - | chr3.1:78681019-78681038 | None:intergenic | 45.0% | |
| GACTTGTCGGAAACAAATGG+TGG | + | chr3.1:78682442-78682461 | MS.gene06253:CDS | 45.0% | |
| GGAGAAAGAATCTGCTGCAA+TGG | + | chr3.1:78682265-78682284 | MS.gene06253:CDS | 45.0% | |
| GGTGGAATTTCGTCTCTGTT+AGG | + | chr3.1:78681714-78681733 | MS.gene06253:CDS | 45.0% | |
| GGTTCAGACAAACGCTGATA+GGG | - | chr3.1:78680945-78680964 | None:intergenic | 45.0% | |
| GTGAAACCAGAACCGAAACA+GGG | - | chr3.1:78682409-78682428 | None:intergenic | 45.0% | |
| TAAGAGTGAGTCGATTGCAG+TGG | - | chr3.1:78681394-78681413 | None:intergenic | 45.0% | |
| TATTTCGAGAGTTTCCACGG+TGG | + | chr3.1:78681533-78681552 | MS.gene06253:CDS | 45.0% | |
| TCACCTATTGAACCCTGCTT+TGG | + | chr3.1:78682364-78682383 | MS.gene06253:CDS | 45.0% | |
| TGCAGCACCCTTTCAATAGA+AGG | + | chr3.1:78682303-78682322 | MS.gene06253:CDS | 45.0% | |
| TGGCGGAAATAAGACGAGAA+AGG | + | chr3.1:78682181-78682200 | MS.gene06253:CDS | 45.0% | |
| TTCACAAGGTTATGCAGCAG+CGG | + | chr3.1:78681761-78681780 | MS.gene06253:CDS | 45.0% | |
| TTCCAGCTCCTCTGATATGA+AGG | + | chr3.1:78681494-78681513 | MS.gene06253:CDS | 45.0% | |
| ! | AGAAATCGGTGAGGTGGTTT+TGG | - | chr3.1:78681056-78681075 | None:intergenic | 45.0% |
| ! | GACTTGGTCGTGGTAAGATT+TGG | + | chr3.1:78682537-78682556 | MS.gene06253:CDS | 45.0% |
| ! | GGATCTTTAGGAAGGATGAG+AGG | + | chr3.1:78682324-78682343 | MS.gene06253:CDS | 45.0% |
| ! | TGAGTTTGGAGTTTACCGTG+GGG | - | chr3.1:78681198-78681217 | None:intergenic | 45.0% |
| ! | TTCGGAGGATGAGAGTATGA+GGG | + | chr3.1:78681923-78681942 | MS.gene06253:CDS | 45.0% |
| ! | TTGTTAGATGGACTTGGTCG+TGG | + | chr3.1:78682527-78682546 | MS.gene06253:CDS | 45.0% |
| ! | TTTCGGAGGATGAGAGTATG+AGG | + | chr3.1:78681922-78681941 | MS.gene06253:CDS | 45.0% |
| !! | GGATGAGAGTATGAGGGTTT+TGG | + | chr3.1:78681929-78681948 | MS.gene06253:CDS | 45.0% |
| !! | TACGCAGAAGCTTGTTGAGT+TGG | + | chr3.1:78682484-78682503 | MS.gene06253:CDS | 45.0% |
| !! | TCAGGCGTTGAGTTTGACTA+GGG | + | chr3.1:78681665-78681684 | MS.gene06253:CDS | 45.0% |
| !! | TTCAGGCGTTGAGTTTGACT+AGG | + | chr3.1:78681664-78681683 | MS.gene06253:CDS | 45.0% |
| !!! | GGTTTTTAAGTGATGGACGG+TGG | - | chr3.1:78680998-78681017 | None:intergenic | 45.0% |
| !!! | TATGAGGGTTTTGGCTGTGA+AGG | + | chr3.1:78681938-78681957 | MS.gene06253:CDS | 45.0% |
| ACGGAAGAGAACATCGCAGT+CGG | - | chr3.1:78681265-78681284 | None:intergenic | 50.0% | |
| AGAGCGATTGGATCTAGAGG+TGG | + | chr3.1:78681696-78681715 | MS.gene06253:CDS | 50.0% | |
| AGATCGAACGGCTTCACGTT+TGG | - | chr3.1:78681319-78681338 | None:intergenic | 50.0% | |
| AGGGACAATGCTAGAGCGAT+TGG | + | chr3.1:78681684-78681703 | MS.gene06253:CDS | 50.0% | |
| ATTTGTCAAGGCGGAACACC+AGG | + | chr3.1:78681738-78681757 | MS.gene06253:CDS | 50.0% | |
| CTCATCGCACGGTTGCAAAT+CGG | + | chr3.1:78681351-78681370 | MS.gene06253:CDS | 50.0% | |
| CTCCTTCATATCAGAGGAGC+TGG | - | chr3.1:78681499-78681518 | None:intergenic | 50.0% | |
| CTTCACGTTTGGAGAAAGCG+GGG | - | chr3.1:78681308-78681327 | None:intergenic | 50.0% | |
| GAAACAAATGGTGGCTGCTG+GGG | + | chr3.1:78682451-78682470 | MS.gene06253:CDS | 50.0% | |
| GCGAGGGCTGTTTATGCTAT+GGG | + | chr3.1:78682152-78682171 | MS.gene06253:CDS | 50.0% | |
| GCTAGAGCGATTGGATCTAG+AGG | + | chr3.1:78681693-78681712 | MS.gene06253:CDS | 50.0% | |
| GCTGCATAACCTTGTGAACC+TGG | - | chr3.1:78681759-78681778 | None:intergenic | 50.0% | |
| GCTTCACGTTTGGAGAAAGC+GGG | - | chr3.1:78681309-78681328 | None:intergenic | 50.0% | |
| GGAAACAAATGGTGGCTGCT+GGG | + | chr3.1:78682450-78682469 | MS.gene06253:CDS | 50.0% | |
| GGCTTCACGTTTGGAGAAAG+CGG | - | chr3.1:78681310-78681329 | None:intergenic | 50.0% | |
| TGCGAGGGCTGTTTATGCTA+TGG | + | chr3.1:78682151-78682170 | MS.gene06253:CDS | 50.0% | |
| TGCGATGTTCTCTTCCGTAG+CGG | + | chr3.1:78681267-78681286 | MS.gene06253:CDS | 50.0% | |
| TTCACGTTTGGAGAAAGCGG+GGG | - | chr3.1:78681307-78681326 | None:intergenic | 50.0% | |
| TTGGCGCGAGAAAATGCGAT+TGG | + | chr3.1:78681882-78681901 | MS.gene06253:CDS | 50.0% | |
| ! | GTTATGCAGCAGCGGTTTTG+AGG | + | chr3.1:78681769-78681788 | MS.gene06253:CDS | 50.0% |
| !! | TGAGTTGGTGGTGGAGGATT+TGG | - | chr3.1:78681091-78681110 | None:intergenic | 50.0% |
| !! | TGGTGAAGGGTTTGTTGGGA+GGG | + | chr3.1:78682082-78682101 | MS.gene06253:CDS | 50.0% |
| !! | TTGGTGAAGGGTTTGTTGGG+AGG | + | chr3.1:78682081-78682100 | MS.gene06253:CDS | 50.0% |
| !! | TTGTTAGGGTTGGCTTCGTC+TGG | + | chr3.1:78681852-78681871 | MS.gene06253:CDS | 50.0% |
| !!! | AGCAGCGGTTTTGAGGAATC+TGG | + | chr3.1:78681776-78681795 | MS.gene06253:CDS | 50.0% |
| !!! | AGGGTTTTGGATTCGGGAAG+TGG | + | chr3.1:78681612-78681631 | MS.gene06253:CDS | 50.0% |
| !!! | AGGGTTTTGGCTGTGAAGGA+AGG | + | chr3.1:78681942-78681961 | MS.gene06253:CDS | 50.0% |
| !!! | GGTGAGGTGGTTTTGGAGTT+GGG | - | chr3.1:78681049-78681068 | None:intergenic | 50.0% |
| !!! | GTTTTGGCTGTGAAGGAAGG+TGG | + | chr3.1:78681945-78681964 | MS.gene06253:CDS | 50.0% |
| AAACGGCGTCGTTGAGGGTT+TGG | - | chr3.1:78681143-78681162 | None:intergenic | 55.0% | |
| AGAGTGAAACGGCGTCGTTG+AGG | - | chr3.1:78681149-78681168 | None:intergenic | 55.0% | |
| AGAGTTTCCACGGTGGAGAG+TGG | + | chr3.1:78681540-78681559 | MS.gene06253:CDS | 55.0% | |
| ATTCTTCCCACTCTCCACCG+TGG | - | chr3.1:78681550-78681569 | None:intergenic | 55.0% | |
| ATTGCAGTGGCGCGTGATTC+TGG | - | chr3.1:78681381-78681400 | None:intergenic | 55.0% | |
| CAGTGGAGAAATCGGTGAGG+TGG | - | chr3.1:78681062-78681081 | None:intergenic | 55.0% | |
| CGGAAACAAATGGTGGCTGC+TGG | + | chr3.1:78682449-78682468 | MS.gene06253:CDS | 55.0% | |
| GAGGTGAAGGGAGAGTGAGT+TGG | - | chr3.1:78681106-78681125 | None:intergenic | 55.0% | |
| GAGTGAAACGGCGTCGTTGA+GGG | - | chr3.1:78681148-78681167 | None:intergenic | 55.0% | |
| GAGTTTCCACGGTGGAGAGT+GGG | + | chr3.1:78681541-78681560 | MS.gene06253:CDS | 55.0% | |
| GATGGAGTGGAGGAGGTGAA+GGG | - | chr3.1:78681118-78681137 | None:intergenic | 55.0% | |
| GATGTTGGATGGGAAAGGCG+TGG | + | chr3.1:78682241-78682260 | MS.gene06253:CDS | 55.0% | |
| GTCGTTGAGGGTTTGGAGGA+TGG | - | chr3.1:78681136-78681155 | None:intergenic | 55.0% | |
| GTTACAATAGCCGTCGCGCA+AGG | + | chr3.1:78681441-78681460 | MS.gene06253:CDS | 55.0% | |
| TCGAGTAACCGAACCAGCAC+CGG | - | chr3.1:78681474-78681493 | None:intergenic | 55.0% | |
| TGAGGGTTTGGAGGATGGAG+TGG | - | chr3.1:78681131-78681150 | None:intergenic | 55.0% | |
| TTTGGAGGATGGAGTGGAGG+AGG | - | chr3.1:78681125-78681144 | None:intergenic | 55.0% | |
| ! | GTGAAGGGAGAGTGAGTTGG+TGG | - | chr3.1:78681103-78681122 | None:intergenic | 55.0% |
| !! | AAGGGAGAGTGAGTTGGTGG+TGG | - | chr3.1:78681100-78681119 | None:intergenic | 55.0% |
| !! | AGGGTTGGCTTCGTCTGGAA+CGG | + | chr3.1:78681857-78681876 | MS.gene06253:CDS | 55.0% |
| !! | GGGTTTGTTGGGAGGGTGAT+TGG | + | chr3.1:78682089-78682108 | MS.gene06253:CDS | 55.0% |
| !! | GTGTAGTTCCGGTGCTGGTT+CGG | + | chr3.1:78681463-78681482 | MS.gene06253:CDS | 55.0% |
| !!! | CGGTGAGGTGGTTTTGGAGT+TGG | - | chr3.1:78681050-78681069 | None:intergenic | 55.0% |
| AGAAAGCGGGGGTTTCGAGG+AGG | - | chr3.1:78681296-78681315 | None:intergenic | 60.0% | |
| CGGAACTACACCTTGCGCGA+CGG | - | chr3.1:78681454-78681473 | None:intergenic | 60.0% | |
| CGTCGCGCAAGGTGTAGTTC+CGG | + | chr3.1:78681452-78681471 | MS.gene06253:CDS | 60.0% | |
| GAACATCGCAGTCGGTGACG+TGG | - | chr3.1:78681257-78681276 | None:intergenic | 60.0% | |
| GCAAGGTGTAGTTCCGGTGC+TGG | + | chr3.1:78681458-78681477 | MS.gene06253:CDS | 60.0% | |
| GGATGGAGTGGAGGAGGTGA+AGG | - | chr3.1:78681119-78681138 | None:intergenic | 60.0% | |
| GGCGGAACACCAGGTTCACA+AGG | + | chr3.1:78681747-78681766 | MS.gene06253:CDS | 60.0% | |
| GGGTTTGGAGGATGGAGTGG+AGG | - | chr3.1:78681128-78681147 | None:intergenic | 60.0% | |
| TGGAGAAAGCGGGGGTTTCG+AGG | - | chr3.1:78681299-78681318 | None:intergenic | 60.0% | |
| TTTCGAGGAGGAGGCCGCTA+CGG | - | chr3.1:78681284-78681303 | None:intergenic | 60.0% | |
| ! | GTTGGATGGGAAAGGCGTGG+AGG | + | chr3.1:78682244-78682263 | MS.gene06253:CDS | 60.0% |
| !! | GGAGAGTGAGTTGGTGGTGG+AGG | - | chr3.1:78681097-78681116 | None:intergenic | 60.0% |
| !! | GGGTTGGCTTCGTCTGGAAC+GGG | + | chr3.1:78681858-78681877 | MS.gene06253:CDS | 60.0% |
| !! | GGTTGGCTTCGTCTGGAACG+GGG | + | chr3.1:78681859-78681878 | MS.gene06253:CDS | 60.0% |
| AAGCGGGGGTTTCGAGGAGG+AGG | - | chr3.1:78681293-78681312 | None:intergenic | 65.0% | |
| CATCGCAGTCGGTGACGTGG+CGG | - | chr3.1:78681254-78681273 | None:intergenic | 65.0% | |
| CGGCGTCGTTGAGGGTTTGG+AGG | - | chr3.1:78681140-78681159 | None:intergenic | 65.0% | |
| GGTGAGGATTGCGGCTGCGA+GGG | + | chr3.1:78682136-78682155 | MS.gene06253:CDS | 65.0% | |
| ! | GGCTTCGTCTGGAACGGGGT+TGG | + | chr3.1:78681863-78681882 | MS.gene06253:CDS | 65.0% |
| CGGTGAGGATTGCGGCTGCG+AGG | + | chr3.1:78682135-78682154 | MS.gene06253:CDS | 70.0% | |
| GGTGACGTGGCGGTGGAGAG+TGG | - | chr3.1:78681244-78681263 | None:intergenic | 70.0% | |
| CGCAGTCGGTGACGTGGCGG+TGG | - | chr3.1:78681251-78681270 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 78680913 | 78682580 | 78680913 | ID=MS.gene06253 |
| chr3.1 | mRNA | 78680913 | 78682580 | 78680913 | ID=MS.gene06253.t1;Parent=MS.gene06253 |
| chr3.1 | exon | 78680913 | 78682580 | 78680913 | ID=MS.gene06253.t1.exon1;Parent=MS.gene06253.t1 |
| chr3.1 | CDS | 78680913 | 78682580 | 78680913 | ID=cds.MS.gene06253.t1;Parent=MS.gene06253.t1 |
| Gene Sequence |
| Protein sequence |
