Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063745.t1 | XP_003609926.2 | 99.5 | 197 | 1 | 0 | 1 | 197 | 138 | 334 | 2.00E-110 | 408.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063745.t1 | G7JR56 | 99.5 | 197 | 1 | 0 | 1 | 197 | 138 | 334 | 1.5e-110 | 408.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049230 | MS.gene063745 | 0.80365 | 3.15E-49 | -1.69E-46 |
| MS.gene049378 | MS.gene063745 | 0.86029 | 2.29E-63 | -1.69E-46 |
| MS.gene049669 | MS.gene063745 | 0.814839 | 1.26E-51 | -1.69E-46 |
| MS.gene04991 | MS.gene063745 | -0.802345 | 5.86E-49 | -1.69E-46 |
| MS.gene050227 | MS.gene063745 | 0.823226 | 1.55E-53 | -1.69E-46 |
| MS.gene050228 | MS.gene063745 | 0.817146 | 3.84E-52 | -1.69E-46 |
| MS.gene050623 | MS.gene063745 | -0.808632 | 2.82E-50 | -1.69E-46 |
| MS.gene050719 | MS.gene063745 | 0.801648 | 8.15E-49 | -1.69E-46 |
| MS.gene051064 | MS.gene063745 | 0.823119 | 1.64E-53 | -1.69E-46 |
| MS.gene051935 | MS.gene063745 | 0.822289 | 2.56E-53 | -1.69E-46 |
| MS.gene051983 | MS.gene063745 | 0.80807 | 3.71E-50 | -1.69E-46 |
| MS.gene052176 | MS.gene063745 | 0.849953 | 2.32E-60 | -1.69E-46 |
| MS.gene052389 | MS.gene063745 | 0.846115 | 2.66E-59 | -1.69E-46 |
| MS.gene052586 | MS.gene063745 | 0.800719 | 1.26E-48 | -1.69E-46 |
| MS.gene054468 | MS.gene063745 | 0.852707 | 3.87E-61 | -1.69E-46 |
| MS.gene055701 | MS.gene063745 | 0.832996 | 6.87E-56 | -1.69E-46 |
| MS.gene056506 | MS.gene063745 | 0.824141 | 9.48E-54 | -1.69E-46 |
| MS.gene056979 | MS.gene063745 | 0.804325 | 2.28E-49 | -1.69E-46 |
| MS.gene057026 | MS.gene063745 | 0.880784 | 4.13E-70 | -1.69E-46 |
| MS.gene058139 | MS.gene063745 | 0.80953 | 1.81E-50 | -1.69E-46 |
| MS.gene060572 | MS.gene063745 | 0.818948 | 1.50E-52 | -1.69E-46 |
| MS.gene060879 | MS.gene063745 | 0.832159 | 1.11E-55 | -1.69E-46 |
| MS.gene061040 | MS.gene063745 | -0.812031 | 5.20E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 38 sgRNAs with CRISPR-Local
Find 133 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCATGTGTACGAGTTCTTTA+AGG | 0.194014 | 8.2:+8932421 | MS.gene063745:CDS |
| CACCTACAAATCTCTGATTT+TGG | 0.208922 | 8.2:-8933817 | None:intergenic |
| CTCATCAACCAACTCATTCT+TGG | 0.309879 | 8.2:-8934151 | None:intergenic |
| GTCTCGGCAGAATGTAATTA+AGG | 0.345693 | 8.2:+8933702 | MS.gene063745:CDS |
| TGAATCGCCGTCTGAGCACC+TGG | 0.365340 | 8.2:-8933557 | None:intergenic |
| AAGACACCGTATTTCAAGTC+AGG | 0.400340 | 8.2:+8933521 | MS.gene063745:CDS |
| GACCAAAATCAGAGATTTGT+AGG | 0.415035 | 8.2:+8933815 | MS.gene063745:CDS |
| ATATCCCATCAAGTGCAAAA+TGG | 0.416702 | 8.2:-8933789 | None:intergenic |
| TTCTGTCCAGTTCTTAACTT+TGG | 0.420976 | 8.2:-8934187 | None:intergenic |
| TGGTGACCAAAGTTAAGAAC+TGG | 0.453694 | 8.2:+8934181 | MS.gene063745:CDS |
| ATTATGAAAACTCATATCCT+TGG | 0.454107 | 8.2:+8934127 | MS.gene063745:CDS |
| TGAATCTCATGGAAAAGTCC+TGG | 0.458226 | 8.2:-8933757 | None:intergenic |
| GCAATAGAGTGTGCTGAAGT+TGG | 0.485346 | 8.2:+8934084 | MS.gene063745:CDS |
| GCCGTCTGAGCACCTGGGAG+AGG | 0.498666 | 8.2:-8933551 | None:intergenic |
| TTCTTAACTTTGGTCACCAA+AGG | 0.502489 | 8.2:-8934177 | None:intergenic |
| TTAAGGATCACACTATTGAA+TGG | 0.508954 | 8.2:+8933719 | MS.gene063745:CDS |
| GTTGGTTGATGAGCACCCTT+TGG | 0.511476 | 8.2:+8934161 | MS.gene063745:CDS |
| CCCTCTCCCAGGTGCTCAGA+CGG | 0.520221 | 8.2:+8933550 | MS.gene063745:CDS |
| CCGTCTGAGCACCTGGGAGA+GGG | 0.523562 | 8.2:-8933550 | None:intergenic |
| TAACAGGACTTTAAATGCCA+AGG | 0.528929 | 8.2:+8934035 | MS.gene063745:intron |
| ACCAAAATCATACGTTACAA+TGG | 0.539123 | 8.2:-8933606 | None:intergenic |
| TCTTAACTTTGGTCACCAAA+GGG | 0.540216 | 8.2:-8934176 | None:intergenic |
| ATTATCATCAATAAGAACCT+TGG | 0.545700 | 8.2:-8934052 | None:intergenic |
| TGAATCCCTGACTTGAAATA+CGG | 0.546358 | 8.2:-8933527 | None:intergenic |
| GGTTACCAAAGTGAATCTCA+TGG | 0.554939 | 8.2:-8933768 | None:intergenic |
| TGGAACTGTTCACGTGATGA+AGG | 0.557011 | 8.2:+8933112 | MS.gene063745:CDS |
| AGACACCGTATTTCAAGTCA+GGG | 0.563775 | 8.2:+8933522 | MS.gene063745:CDS |
| TCAGGGATTCACCCTCTCCC+AGG | 0.563877 | 8.2:+8933539 | MS.gene063745:CDS |
| ACCAACTCATTCTTGGACCA+AGG | 0.564088 | 8.2:-8934144 | None:intergenic |
| GAATCTCATGGAAAAGTCCT+GGG | 0.569077 | 8.2:-8933756 | None:intergenic |
| AGTTAAGAACTGGACAGAAG+TGG | 0.584067 | 8.2:+8934191 | MS.gene063745:CDS |
| TGGATAGAGAAGAATTTCCC+AGG | 0.586791 | 8.2:+8933739 | MS.gene063745:CDS |
| AATCATACGTTACAATGGAT+AGG | 0.596490 | 8.2:-8933601 | None:intergenic |
| TCCTTGGTCCAAGAATGAGT+TGG | 0.633229 | 8.2:+8934143 | MS.gene063745:CDS |
| GAATCGCCGTCTGAGCACCT+GGG | 0.644858 | 8.2:-8933556 | None:intergenic |
| TTCTTATTGATGATAATCCG+CGG | 0.647289 | 8.2:+8934058 | MS.gene063745:CDS |
| AGTATTAGGAAATTTCGTGT+CGG | 0.674898 | 8.2:+8932343 | None:intergenic |
| GCACACTCTATTGCATACCG+CGG | 0.678841 | 8.2:-8934075 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACATATAATAAATGTGATT+CGG | - | chr8.2:8933679-8933698 | None:intergenic | 15.0% |
| !!! | TTTCACTAATTTTATTCTTT+CGG | + | chr8.2:8933431-8933450 | MS.gene063745:intron | 15.0% |
| !! | ATATCTGTAACAGAAATTAA+GGG | - | chr8.2:8933093-8933112 | None:intergenic | 20.0% |
| !! | ATCACATTTATTATATGTTC+AGG | + | chr8.2:8933680-8933699 | MS.gene063745:intron | 20.0% |
| !! | CAATATTAAACAAATGTCAT+CGG | + | chr8.2:8932503-8932522 | MS.gene063745:intron | 20.0% |
| !! | GAAAAATTCATTAGAGAATT+GGG | - | chr8.2:8933348-8933367 | None:intergenic | 20.0% |
| !! | GATAAAAAATAGTACTTGAA+CGG | - | chr8.2:8933985-8934004 | None:intergenic | 20.0% |
| !! | TCTATATTAATACATAAGAC+TGG | - | chr8.2:8932578-8932597 | None:intergenic | 20.0% |
| !!! | AGTTTTCATAATCAAAAAGT+AGG | - | chr8.2:8934119-8934138 | None:intergenic | 20.0% |
| !!! | TTTTATCAAGATTTTTGTGT+AGG | + | chr8.2:8933404-8933423 | MS.gene063745:intron | 20.0% |
| ! | AATAAGCCTAATTTGAATAG+AGG | - | chr8.2:8932623-8932642 | None:intergenic | 25.0% |
| ! | ATAAGCCTAATTTGAATAGA+GGG | - | chr8.2:8932622-8932641 | None:intergenic | 25.0% |
| ! | ATTATCATCAATAAGAACCT+TGG | - | chr8.2:8934055-8934074 | None:intergenic | 25.0% |
| ! | ATTATGAAAACTCATATCCT+TGG | + | chr8.2:8934127-8934146 | MS.gene063745:CDS | 25.0% |
| ! | CAAATTTACAACAAAAGCAA+TGG | - | chr8.2:8933040-8933059 | None:intergenic | 25.0% |
| ! | CATATCTGTAACAGAAATTA+AGG | - | chr8.2:8933094-8933113 | None:intergenic | 25.0% |
| ! | CCTATAAATCTATGTTCAAA+GGG | + | chr8.2:8933285-8933304 | MS.gene063745:intron | 25.0% |
| ! | CCTTTGAACATAGATTTATA+GGG | - | chr8.2:8933287-8933306 | None:intergenic | 25.0% |
| ! | CGATGACATTTGTTTAATAT+TGG | - | chr8.2:8932505-8932524 | None:intergenic | 25.0% |
| ! | CTTAATTTCTGTTACAGATA+TGG | + | chr8.2:8933092-8933111 | MS.gene063745:intron | 25.0% |
| ! | GAAAGATTTAGACAGAATTT+GGG | - | chr8.2:8932912-8932931 | None:intergenic | 25.0% |
| ! | GGAAAAATTCATTAGAGAAT+TGG | - | chr8.2:8933349-8933368 | None:intergenic | 25.0% |
| ! | TATTAGAGAAACCATTAGAA+AGG | + | chr8.2:8932696-8932715 | MS.gene063745:intron | 25.0% |
| ! | TTCCTAATTCTTGTTCAAAA+GGG | + | chr8.2:8933365-8933384 | MS.gene063745:intron | 25.0% |
| ! | TTTATTATATGTTCAGGTCT+CGG | + | chr8.2:8933686-8933705 | MS.gene063745:intron | 25.0% |
| ! | TTTCCTAATTCTTGTTCAAA+AGG | + | chr8.2:8933364-8933383 | MS.gene063745:intron | 25.0% |
| !! | TGATATGACTTGATTTTCTT+TGG | + | chr8.2:8933871-8933890 | MS.gene063745:intron | 25.0% |
| !! | TTAATTTTCTTTCGTGATAG+AGG | + | chr8.2:8932652-8932671 | MS.gene063745:intron | 25.0% |
| !!! | AGAACTACTTTTTCTATGAA+TGG | + | chr8.2:8932944-8932963 | MS.gene063745:intron | 25.0% |
| !!! | ATAGCAAAATTGTTCTAAAG+AGG | - | chr8.2:8933149-8933168 | None:intergenic | 25.0% |
| !!! | GAACTACTTTTTCTATGAAT+GGG | + | chr8.2:8932945-8932964 | MS.gene063745:intron | 25.0% |
| !!! | TTCTTTAAGGTATCTTTTGT+TGG | + | chr8.2:8932434-8932453 | MS.gene063745:intron | 25.0% |
| AACCATTAGAAAGGATTTAG+AGG | + | chr8.2:8932705-8932724 | MS.gene063745:intron | 30.0% | |
| AATACATAAGACTGGAGAAT+AGG | - | chr8.2:8932570-8932589 | None:intergenic | 30.0% | |
| AATCATACGTTACAATGGAT+AGG | - | chr8.2:8933604-8933623 | None:intergenic | 30.0% | |
| ACCAAAATCATACGTTACAA+TGG | - | chr8.2:8933609-8933628 | None:intergenic | 30.0% | |
| ATACATAAGACTGGAGAATA+GGG | - | chr8.2:8932569-8932588 | None:intergenic | 30.0% | |
| ATAGAGAAAAACAGATGAAG+AGG | - | chr8.2:8933852-8933871 | None:intergenic | 30.0% | |
| ATCATAATTCAGTTCCTTGT+TGG | + | chr8.2:8932979-8932998 | MS.gene063745:intron | 30.0% | |
| CATTGTGTACAGAAAATTGT+TGG | + | chr8.2:8933171-8933190 | MS.gene063745:intron | 30.0% | |
| CCCTATAAATCTATGTTCAA+AGG | + | chr8.2:8933284-8933303 | MS.gene063745:intron | 30.0% | |
| CCCTTTGAACATAGATTTAT+AGG | - | chr8.2:8933288-8933307 | None:intergenic | 30.0% | |
| GAACTTGAACAAATCAAACA+AGG | - | chr8.2:8933210-8933229 | None:intergenic | 30.0% | |
| GGAAAGATTTAGACAGAATT+TGG | - | chr8.2:8932913-8932932 | None:intergenic | 30.0% | |
| GTTCTGTCATAAACCAAATT+TGG | - | chr8.2:8932745-8932764 | None:intergenic | 30.0% | |
| TGATGTGAATCTAAACAGTA+GGG | - | chr8.2:8933923-8933942 | None:intergenic | 30.0% | |
| TTAAGGATCACACTATTGAA+TGG | + | chr8.2:8933719-8933738 | MS.gene063745:CDS | 30.0% | |
| TTATTCTTTCGGATGACTAA+TGG | + | chr8.2:8933442-8933461 | MS.gene063745:intron | 30.0% | |
| TTTGTGCATATGCTTGAATT+TGG | + | chr8.2:8933056-8933075 | MS.gene063745:intron | 30.0% | |
| ! | CAACAATTTTCTGTACACAA+TGG | - | chr8.2:8933173-8933192 | None:intergenic | 30.0% |
| ! | GTTTCTCTAATAGTTTTCCT+AGG | - | chr8.2:8932688-8932707 | None:intergenic | 30.0% |
| ! | TCCATTGTAACGTATGATTT+TGG | + | chr8.2:8933605-8933624 | MS.gene063745:intron | 30.0% |
| ! | TTCTTATTGATGATAATCCG+CGG | + | chr8.2:8934058-8934077 | MS.gene063745:CDS | 30.0% |
| !! | GTAACGTATGATTTTGGTAT+TGG | + | chr8.2:8933611-8933630 | MS.gene063745:intron | 30.0% |
| !!! | AAGTTTTGTTTTCACGATTG+AGG | + | chr8.2:8933318-8933337 | MS.gene063745:intron | 30.0% |
| !!! | CTTGTTTGTTGTTGTTTTGT+TGG | + | chr8.2:8932815-8932834 | MS.gene063745:intron | 30.0% |
| AAAACAGATGAAGAGGATCA+AGG | - | chr8.2:8933845-8933864 | None:intergenic | 35.0% | |
| AACCTTAAGAGGAATCTTGT+CGG | + | chr8.2:8933643-8933662 | MS.gene063745:intron | 35.0% | |
| ATATCCCATCAAGTGCAAAA+TGG | - | chr8.2:8933792-8933811 | None:intergenic | 35.0% | |
| CTTTGCCCTCTATTCAAATT+AGG | + | chr8.2:8932614-8932633 | MS.gene063745:intron | 35.0% | |
| GACCAAAATCAGAGATTTGT+AGG | + | chr8.2:8933815-8933834 | MS.gene063745:CDS | 35.0% | |
| GACCTCTAAATCCTTTCTAA+TGG | - | chr8.2:8932710-8932729 | None:intergenic | 35.0% | |
| GACTAAAAAATTCACGTGTC+AGG | - | chr8.2:8932863-8932882 | None:intergenic | 35.0% | |
| GGAAGAAAAACAGTAGGAAA+AGG | - | chr8.2:8933949-8933968 | None:intergenic | 35.0% | |
| GGACTTTCATTAACCTTAAG+AGG | + | chr8.2:8933632-8933651 | MS.gene063745:intron | 35.0% | |
| GTGATGTGAATCTAAACAGT+AGG | - | chr8.2:8933924-8933943 | None:intergenic | 35.0% | |
| TAAACAAATGTCATCGGAAC+AGG | + | chr8.2:8932509-8932528 | MS.gene063745:intron | 35.0% | |
| TAACAGGACTTTAAATGCCA+AGG | + | chr8.2:8934035-8934054 | MS.gene063745:intron | 35.0% | |
| TACATAAGACTGGAGAATAG+GGG | - | chr8.2:8932568-8932587 | None:intergenic | 35.0% | |
| TCATGTGTACGAGTTCTTTA+AGG | + | chr8.2:8932421-8932440 | MS.gene063745:CDS | 35.0% | |
| TCTTAACTTTGGTCACCAAA+GGG | - | chr8.2:8934179-8934198 | None:intergenic | 35.0% | |
| TGGTTTATGACAGAACACTA+TGG | + | chr8.2:8932749-8932768 | MS.gene063745:intron | 35.0% | |
| TTCTGTCCAGTTCTTAACTT+TGG | - | chr8.2:8934190-8934209 | None:intergenic | 35.0% | |
| TTCTTAACTTTGGTCACCAA+AGG | - | chr8.2:8934180-8934199 | None:intergenic | 35.0% | |
| ! | CAATGAGTTGGATCCAAATT+TGG | + | chr8.2:8932729-8932748 | MS.gene063745:intron | 35.0% |
| ! | CACCTACAAATCTCTGATTT+TGG | - | chr8.2:8933820-8933839 | None:intergenic | 35.0% |
| ! | CTTTTCCATGAGATTCACTT+TGG | + | chr8.2:8933763-8933782 | MS.gene063745:CDS | 35.0% |
| ! | GACCCTTTTGAACAAGAATT+AGG | - | chr8.2:8933370-8933389 | None:intergenic | 35.0% |
| ! | GTAACCATTTTGCACTTGAT+GGG | + | chr8.2:8933785-8933804 | MS.gene063745:CDS | 35.0% |
| ! | TGAATCCCTGACTTGAAATA+CGG | - | chr8.2:8933530-8933549 | None:intergenic | 35.0% |
| !! | AAGTCTCTCTCTTTGAAATC+TGG | + | chr8.2:8933238-8933257 | MS.gene063745:intron | 35.0% |
| !! | ACTTGCTGTTTCTCATTAAC+AGG | + | chr8.2:8934019-8934038 | MS.gene063745:intron | 35.0% |
| !! | GTTCTAGGAAGAAAAACAGT+AGG | - | chr8.2:8933955-8933974 | None:intergenic | 35.0% |
| !! | TTGAACGGATTAAGAGTTCT+AGG | - | chr8.2:8933970-8933989 | None:intergenic | 35.0% |
| !!! | GTTGTTGTTTTGTTGGTCAA+TGG | + | chr8.2:8932822-8932841 | MS.gene063745:intron | 35.0% |
| AAGTAGTTCTCTTCAGCAAG+AGG | - | chr8.2:8932934-8932953 | None:intergenic | 40.0% | |
| AATCTAAACAGTAGGGAAGG+AGG | - | chr8.2:8933916-8933935 | None:intergenic | 40.0% | |
| ACATAAGACTGGAGAATAGG+GGG | - | chr8.2:8932567-8932586 | None:intergenic | 40.0% | |
| ACCTTAAGAGGAATCTTGTC+GGG | + | chr8.2:8933644-8933663 | MS.gene063745:intron | 40.0% | |
| AGATACACCTAAAGCCAACA+AGG | - | chr8.2:8932996-8933015 | None:intergenic | 40.0% | |
| AGTTAAGAACTGGACAGAAG+TGG | + | chr8.2:8934191-8934210 | MS.gene063745:CDS | 40.0% | |
| CGATCGATGTTCAACAGATA+TGG | - | chr8.2:8932885-8932904 | None:intergenic | 40.0% | |
| CTCATCAACCAACTCATTCT+TGG | - | chr8.2:8934154-8934173 | None:intergenic | 40.0% | |
| GAATCTCATGGAAAAGTCCT+GGG | - | chr8.2:8933759-8933778 | None:intergenic | 40.0% | |
| GGATTTAGAGGTCAATGAGT+TGG | + | chr8.2:8932717-8932736 | MS.gene063745:intron | 40.0% | |
| GGTTACCAAAGTGAATCTCA+TGG | - | chr8.2:8933771-8933790 | None:intergenic | 40.0% | |
| GTCTCGGCAGAATGTAATTA+AGG | + | chr8.2:8933702-8933721 | MS.gene063745:CDS | 40.0% | |
| GTGAATCTAAACAGTAGGGA+AGG | - | chr8.2:8933919-8933938 | None:intergenic | 40.0% | |
| TATCTGTTGAACATCGATCG+CGG | + | chr8.2:8932885-8932904 | MS.gene063745:intron | 40.0% | |
| TGAATCTCATGGAAAAGTCC+TGG | - | chr8.2:8933760-8933779 | None:intergenic | 40.0% | |
| TGGATAGAGAAGAATTTCCC+AGG | + | chr8.2:8933739-8933758 | MS.gene063745:CDS | 40.0% | |
| TGGTGACCAAAGTTAAGAAC+TGG | + | chr8.2:8934181-8934200 | MS.gene063745:CDS | 40.0% | |
| TTCTTTCGTGATAGAGGTAG+AGG | + | chr8.2:8932658-8932677 | MS.gene063745:intron | 40.0% | |
| ! | AAGACACCGTATTTCAAGTC+AGG | + | chr8.2:8933521-8933540 | MS.gene063745:CDS | 40.0% |
| ! | ACAGAAATTAAGGGTGCATC+AGG | - | chr8.2:8933084-8933103 | None:intergenic | 40.0% |
| ! | AGACACCGTATTTCAAGTCA+GGG | + | chr8.2:8933522-8933541 | MS.gene063745:CDS | 40.0% |
| ! | GGTAACCATTTTGCACTTGA+TGG | + | chr8.2:8933784-8933803 | MS.gene063745:CDS | 40.0% |
| !! | TTCAGTTCCTTGTTGGCTTT+AGG | + | chr8.2:8932986-8933005 | MS.gene063745:intron | 40.0% |
| !! | TTGTTGGCTTTAGGTGTATC+TGG | + | chr8.2:8932995-8933014 | MS.gene063745:intron | 40.0% |
| ACCAACTCATTCTTGGACCA+AGG | - | chr8.2:8934147-8934166 | None:intergenic | 45.0% | |
| ATAGAGGTAGAGGAAGACCT+AGG | + | chr8.2:8932668-8932687 | MS.gene063745:intron | 45.0% | |
| GCAATAGAGTGTGCTGAAGT+TGG | + | chr8.2:8934084-8934103 | MS.gene063745:CDS | 45.0% | |
| TCCCGACAAGATTCCTCTTA+AGG | - | chr8.2:8933648-8933667 | None:intergenic | 45.0% | |
| TCCTTGGTCCAAGAATGAGT+TGG | + | chr8.2:8934143-8934162 | MS.gene063745:CDS | 45.0% | |
| TGGAACTGTTCACGTGATGA+AGG | + | chr8.2:8933112-8933131 | MS.gene063745:CDS | 45.0% | |
| ! | AAGCCTTATCCCACTAAGTG+GGG | - | chr8.2:8932798-8932817 | None:intergenic | 45.0% |
| ! | ACAAGCCTTATCCCACTAAG+TGG | - | chr8.2:8932800-8932819 | None:intergenic | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | - | chr8.2:8932799-8932818 | None:intergenic | 45.0% |
| ! | CTTTCGGATGACTAATGGAC+TGG | + | chr8.2:8933447-8933466 | MS.gene063745:intron | 45.0% |
| CTTATCCCACTAAGTGGGGT+CGG | - | chr8.2:8932794-8932813 | None:intergenic | 50.0% | |
| GCACACTCTATTGCATACCG+CGG | - | chr8.2:8934078-8934097 | None:intergenic | 50.0% | |
| !! | CGGATGACTAATGGACTGGT+TGG | + | chr8.2:8933451-8933470 | MS.gene063745:intron | 50.0% |
| !! | GTTGGTTGATGAGCACCCTT+TGG | + | chr8.2:8934161-8934180 | MS.gene063745:CDS | 50.0% |
| ACTAAGTGGGGTCGGCTACA+TGG | - | chr8.2:8932786-8932805 | None:intergenic | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | + | chr8.2:8932785-8932804 | MS.gene063745:intron | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | + | chr8.2:8932792-8932811 | MS.gene063745:intron | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | + | chr8.2:8932786-8932805 | MS.gene063745:intron | 55.0% | |
| GAATCGCCGTCTGAGCACCT+GGG | - | chr8.2:8933559-8933578 | None:intergenic | 60.0% | |
| TCAGGGATTCACCCTCTCCC+AGG | + | chr8.2:8933539-8933558 | MS.gene063745:CDS | 60.0% | |
| TGAATCGCCGTCTGAGCACC+TGG | - | chr8.2:8933560-8933579 | None:intergenic | 60.0% | |
| CCCTCTCCCAGGTGCTCAGA+CGG | + | chr8.2:8933550-8933569 | MS.gene063745:CDS | 65.0% | |
| CCGTCTGAGCACCTGGGAGA+GGG | - | chr8.2:8933553-8933572 | None:intergenic | 65.0% | |
| GCCGTCTGAGCACCTGGGAG+AGG | - | chr8.2:8933554-8933573 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 8932345 | 8934257 | 8932345 | ID=MS.gene063745 |
| chr8.2 | mRNA | 8932345 | 8934257 | 8932345 | ID=MS.gene063745.t1;Parent=MS.gene063745 |
| chr8.2 | exon | 8932345 | 8932442 | 8932345 | ID=MS.gene063745.t1.exon1;Parent=MS.gene063745.t1 |
| chr8.2 | CDS | 8932345 | 8932442 | 8932345 | ID=cds.MS.gene063745.t1;Parent=MS.gene063745.t1 |
| chr8.2 | exon | 8933109 | 8933133 | 8933109 | ID=MS.gene063745.t1.exon2;Parent=MS.gene063745.t1 |
| chr8.2 | CDS | 8933109 | 8933133 | 8933109 | ID=cds.MS.gene063745.t1;Parent=MS.gene063745.t1 |
| chr8.2 | exon | 8933495 | 8933615 | 8933495 | ID=MS.gene063745.t1.exon3;Parent=MS.gene063745.t1 |
| chr8.2 | CDS | 8933495 | 8933615 | 8933495 | ID=cds.MS.gene063745.t1;Parent=MS.gene063745.t1 |
| chr8.2 | exon | 8933702 | 8933836 | 8933702 | ID=MS.gene063745.t1.exon4;Parent=MS.gene063745.t1 |
| chr8.2 | CDS | 8933702 | 8933836 | 8933702 | ID=cds.MS.gene063745.t1;Parent=MS.gene063745.t1 |
| chr8.2 | exon | 8934041 | 8934257 | 8934041 | ID=MS.gene063745.t1.exon5;Parent=MS.gene063745.t1 |
| chr8.2 | CDS | 8934041 | 8934257 | 8934041 | ID=cds.MS.gene063745.t1;Parent=MS.gene063745.t1 |
| Gene Sequence |
| Protein sequence |
