Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064081.t1 | XP_013453257.1 | 93.8 | 812 | 38 | 3 | 3 | 804 | 1 | 810 | 0.00E+00 | 1466.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064081.t1 | F4IK92 | 40.6 | 825 | 445 | 16 | 3 | 804 | 14 | 816 | 1.4e-145 | 518.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064081.t1 | A0A072UCW5 | 93.8 | 812 | 38 | 3 | 3 | 804 | 1 | 810 | 0.0e+00 | 1466.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049397 | MS.gene064081 | 0.819618 | 1.06E-52 | -1.69E-46 |
| MS.gene049418 | MS.gene064081 | 0.829462 | 5.08E-55 | -1.69E-46 |
| MS.gene049622 | MS.gene064081 | 0.811821 | 5.78E-51 | -1.69E-46 |
| MS.gene049989 | MS.gene064081 | 0.87718 | 7.72E-69 | -1.69E-46 |
| MS.gene050297 | MS.gene064081 | 0.877249 | 7.31E-69 | -1.69E-46 |
| MS.gene050589 | MS.gene064081 | 0.803197 | 3.91E-49 | -1.69E-46 |
| MS.gene050648 | MS.gene064081 | 0.831524 | 1.59E-55 | -1.69E-46 |
| MS.gene051067 | MS.gene064081 | 0.804779 | 1.83E-49 | -1.69E-46 |
| MS.gene051094 | MS.gene064081 | 0.825086 | 5.68E-54 | -1.69E-46 |
| MS.gene051263 | MS.gene064081 | 0.852025 | 6.05E-61 | -1.69E-46 |
| MS.gene051478 | MS.gene064081 | 0.815877 | 7.38E-52 | -1.69E-46 |
| MS.gene051629 | MS.gene064081 | 0.837064 | 6.48E-57 | -1.69E-46 |
| MS.gene052367 | MS.gene064081 | 0.829115 | 6.17E-55 | -1.69E-46 |
| MS.gene053416 | MS.gene064081 | 0.8343 | 3.25E-56 | -1.69E-46 |
| MS.gene053417 | MS.gene064081 | 0.835452 | 1.66E-56 | -1.69E-46 |
| MS.gene053929 | MS.gene064081 | 0.825823 | 3.80E-54 | -1.69E-46 |
| MS.gene055957 | MS.gene064081 | 0.855808 | 4.92E-62 | -1.69E-46 |
| MS.gene056041 | MS.gene064081 | 0.827902 | 1.21E-54 | -1.69E-46 |
| MS.gene056042 | MS.gene064081 | 0.832282 | 1.03E-55 | -1.69E-46 |
| MS.gene056169 | MS.gene064081 | 0.820812 | 5.63E-53 | -1.69E-46 |
| MS.gene056228 | MS.gene064081 | 0.831686 | 1.45E-55 | -1.69E-46 |
| MS.gene056335 | MS.gene064081 | 0.80911 | 2.23E-50 | -1.69E-46 |
| MS.gene056526 | MS.gene064081 | 0.824536 | 7.66E-54 | -1.69E-46 |
| MS.gene058196 | MS.gene064081 | 0.833027 | 6.75E-56 | -1.69E-46 |
| MS.gene058197 | MS.gene064081 | 0.858309 | 9.00E-63 | -1.69E-46 |
| MS.gene058198 | MS.gene064081 | 0.858397 | 8.48E-63 | -1.69E-46 |
| MS.gene059300 | MS.gene064081 | 0.874824 | 4.99E-68 | -1.69E-46 |
| MS.gene060473 | MS.gene064081 | 0.837082 | 6.41E-57 | -1.69E-46 |
| MS.gene060565 | MS.gene064081 | 0.846919 | 1.60E-59 | -1.69E-46 |
| MS.gene06057 | MS.gene064081 | 0.864105 | 1.54E-64 | -1.69E-46 |
| MS.gene061099 | MS.gene064081 | 0.804636 | 1.96E-49 | -1.69E-46 |
| MS.gene061260 | MS.gene064081 | 0.821593 | 3.72E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064081.t1 | MTR_6g093150 | 76.271 | 59 | 14 | 0 | 131 | 189 | 1 | 59 | 5.09e-13 | 73.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 157 sgRNAs with CRISPR-Local
Find 231 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCGTTCTTGTCATCTTTA+AGG | 0.084954 | 6.4:+63699986 | MS.gene064081:CDS |
| TTTAGGATCCTGCATCTTTA+TGG | 0.153457 | 6.4:-63701010 | None:intergenic |
| AAATTATCCTCTCTGACTTT+TGG | 0.155108 | 6.4:-63701897 | None:intergenic |
| TTGGCTCTGCCTCACAAATT+TGG | 0.181166 | 6.4:-63701685 | None:intergenic |
| CACAACATTGATGTGTAATT+TGG | 0.196160 | 6.4:-63701065 | None:intergenic |
| AACAACCGCAGCAACAATTT+TGG | 0.226264 | 6.4:-63699509 | None:intergenic |
| ATGGATAAACTTTCTATAAC+TGG | 0.262628 | 6.4:-63702158 | None:intergenic |
| TCCTGGGAGAAGCGACATTT+TGG | 0.275170 | 6.4:-63701704 | None:intergenic |
| GTTGAATAGGTGTATTATTC+AGG | 0.277892 | 6.4:+63699834 | MS.gene064081:CDS |
| GGTGAAAAGTAGTGAAAGTT+TGG | 0.278968 | 6.4:+63701788 | MS.gene064081:CDS |
| CAGGATGTGGGTTATGAATA+TGG | 0.288308 | 6.4:+63700833 | MS.gene064081:CDS |
| TTCGTTCTTGTCATCTTTAA+GGG | 0.289104 | 6.4:+63699987 | MS.gene064081:CDS |
| TTATCTCAAGAATCTTTAAA+AGG | 0.289916 | 6.4:+63701636 | MS.gene064081:CDS |
| TAAATATTGGAAAATGCTTC+CGG | 0.292412 | 6.4:+63700191 | MS.gene064081:CDS |
| ACAACATTGATGTGTAATTT+GGG | 0.297728 | 6.4:-63701064 | None:intergenic |
| TACTCTCAAACTCTTCATTA+TGG | 0.299131 | 6.4:-63700760 | None:intergenic |
| CTGCTGCAGCCATGGGATTA+TGG | 0.311128 | 6.4:-63702246 | None:intergenic |
| CACTTTAGCACCGTATCTTC+TGG | 0.313958 | 6.4:+63702205 | MS.gene064081:CDS |
| AACGGTTTGCTTCTCACATT+TGG | 0.314748 | 6.4:-63700952 | None:intergenic |
| AGATCTAAACTCTGCATATA+TGG | 0.315587 | 6.4:+63702079 | MS.gene064081:CDS |
| AACGTGCCAATCATCTCTTT+TGG | 0.320011 | 6.4:-63700699 | None:intergenic |
| ATTGAAAGAGCAATGCAATT+TGG | 0.320218 | 6.4:-63702697 | None:intergenic |
| CAATAAAATTACATCATATC+TGG | 0.334865 | 6.4:+63702812 | MS.gene064081:CDS |
| CCAACAAGAGCATCGAAAAT+AGG | 0.336403 | 6.4:-63699652 | None:intergenic |
| GAGAATTGTTTCGAGTTCTT+TGG | 0.336737 | 6.4:-63699338 | None:intergenic |
| CACGCGGAATCCTCCTGTTT+CGG | 0.343898 | 6.4:+63699735 | MS.gene064081:CDS |
| TGTGAGAAGCAAACCGTTAG+AGG | 0.344735 | 6.4:+63700957 | MS.gene064081:CDS |
| CTAGTTTCTGAAGATGGCTT+TGG | 0.352507 | 6.4:-63701741 | None:intergenic |
| CCAAGCCTACCATTCTTGAT+TGG | 0.357127 | 6.4:-63701596 | None:intergenic |
| ACTACCGAGCCTTCAGAAAC+TGG | 0.367334 | 6.4:+63700222 | MS.gene064081:CDS |
| AAACATGATGCATCAGTTAC+AGG | 0.369760 | 6.4:+63701152 | MS.gene064081:CDS |
| TTCCACTACAGAATGTGTTC+TGG | 0.378816 | 6.4:-63700735 | None:intergenic |
| AGGATAATTTGAACTGCTTA+GGG | 0.382496 | 6.4:+63701910 | MS.gene064081:CDS |
| GAGGATAATTTGAACTGCTT+AGG | 0.390712 | 6.4:+63701909 | MS.gene064081:CDS |
| ACCATTTCTAGCATTGGTTC+TGG | 0.391155 | 6.4:-63701997 | None:intergenic |
| GATCGAGACACACACGATAT+CGG | 0.403024 | 6.4:+63699313 | MS.gene064081:CDS |
| TGCGTTGGGACAAATTGCTT+TGG | 0.405945 | 6.4:+63699957 | MS.gene064081:CDS |
| TTAGTACTAGTTTCTGAAGA+TGG | 0.408101 | 6.4:-63701747 | None:intergenic |
| TGGAGTGCATACGGAGATCC+TGG | 0.410874 | 6.4:-63701721 | None:intergenic |
| ATACCATACAAAACCGAAAC+AGG | 0.420721 | 6.4:-63699748 | None:intergenic |
| CCAGTAGTTTGTGTTACTCT+CGG | 0.422069 | 6.4:-63702027 | None:intergenic |
| CAAATGAAATGACTTGTATT+CGG | 0.426495 | 6.4:+63701097 | MS.gene064081:CDS |
| TTCAGATATTGAAATCAAAC+AGG | 0.427865 | 6.4:+63701128 | MS.gene064081:CDS |
| CACAATGCATTAAACAAAGT+TGG | 0.432006 | 6.4:+63699289 | MS.gene064081:CDS |
| TTGCTTCTCACATTTGGCTT+CGG | 0.433575 | 6.4:-63700946 | None:intergenic |
| AAATATTGGAAAATGCTTCC+GGG | 0.434596 | 6.4:+63700192 | MS.gene064081:CDS |
| GAGCCTAACATCTCTATGTC+TGG | 0.437595 | 6.4:-63700588 | None:intergenic |
| CTGCGTTGATTGAGTTGAAT+AGG | 0.437729 | 6.4:+63699821 | MS.gene064081:CDS |
| TATATGGAAGCTTTGTGTTC+CGG | 0.441349 | 6.4:+63702095 | MS.gene064081:CDS |
| ATTACTACTCAGCTTGTTGT+TGG | 0.446978 | 6.4:-63699245 | None:intergenic |
| CCTTCTCTAACAGAAGAATC+TGG | 0.448809 | 6.4:-63699547 | None:intergenic |
| TTCTTGATTGGATTGTAGAA+AGG | 0.451684 | 6.4:-63701584 | None:intergenic |
| GCTTTGAAATTAGCGAATCA+AGG | 0.460154 | 6.4:+63699595 | MS.gene064081:CDS |
| AGGAATGAGGAGATGGAATG+TGG | 0.463881 | 6.4:-63699373 | None:intergenic |
| AGGGTTTGAAAGATACGGAT+TGG | 0.465253 | 6.4:+63699911 | MS.gene064081:CDS |
| CAGTAGTTTGTGTTACTCTC+GGG | 0.467032 | 6.4:-63702026 | None:intergenic |
| TCCACTACAGAATGTGTTCT+GGG | 0.471821 | 6.4:-63700734 | None:intergenic |
| TAGAGAGGGTTTGAAAGATA+CGG | 0.472957 | 6.4:+63699906 | MS.gene064081:CDS |
| AAAGCGGCTTCTGTTGCGTT+GGG | 0.473923 | 6.4:+63699943 | MS.gene064081:CDS |
| GAGCAAAGGTAAACCTTTGA+AGG | 0.475464 | 6.4:-63700250 | None:intergenic |
| TCTTGATTGGATTGTAGAAA+GGG | 0.477546 | 6.4:-63701583 | None:intergenic |
| AACTTGCCTGCTGCAGCCAT+GGG | 0.477757 | 6.4:-63702253 | None:intergenic |
| GCAAGAGAGGAATGAGGAGA+TGG | 0.478087 | 6.4:-63699380 | None:intergenic |
| AGGACAACCATTTCTAGCAT+TGG | 0.479539 | 6.4:-63702003 | None:intergenic |
| GAAACTGGATCCTCCTTCAA+AGG | 0.479927 | 6.4:+63700237 | MS.gene064081:CDS |
| GAAACTAGTACTAAGCAATC+AGG | 0.487912 | 6.4:+63701756 | MS.gene064081:CDS |
| CATTGTTTACAAAGCAGTCA+TGG | 0.488796 | 6.4:-63700918 | None:intergenic |
| ACATCAATGTTGTGTACAAA+GGG | 0.488994 | 6.4:+63701074 | MS.gene064081:CDS |
| GAACTTGCCTGCTGCAGCCA+TGG | 0.490305 | 6.4:-63702254 | None:intergenic |
| ACTTAATATGAAATCAACTA+CGG | 0.491293 | 6.4:+63700616 | MS.gene064081:CDS |
| AGTCCAGACATAGAGATGTT+AGG | 0.496261 | 6.4:+63700585 | MS.gene064081:CDS |
| CCAATCAAGAATGGTAGGCT+TGG | 0.497219 | 6.4:+63701596 | MS.gene064081:CDS |
| TAAAGCGGCTTCTGTTGCGT+TGG | 0.497925 | 6.4:+63699942 | MS.gene064081:CDS |
| TAAACTTTCTATAACTGGAC+CGG | 0.499508 | 6.4:-63702153 | None:intergenic |
| GCCAAAATGTCGCTTCTCCC+AGG | 0.502514 | 6.4:+63701703 | MS.gene064081:CDS |
| GTCATCCCAAAAGAGATGAT+TGG | 0.502641 | 6.4:+63700693 | MS.gene064081:CDS |
| CATAATCCCATGGCTGCAGC+AGG | 0.504288 | 6.4:+63702247 | MS.gene064081:CDS |
| AAAGCATGTCAAAATGATGT+TGG | 0.506304 | 6.4:+63700662 | MS.gene064081:CDS |
| TCTGCTCAAGTGAGAAAGAA+TGG | 0.511359 | 6.4:+63701954 | MS.gene064081:CDS |
| CCGAGAGTAACACAAACTAC+TGG | 0.513150 | 6.4:+63702027 | MS.gene064081:CDS |
| GTTGAGCTTCTGAATAAAAC+CGG | 0.517186 | 6.4:+63702134 | MS.gene064081:CDS |
| ACTCATTGTTTGTAGCGGCT+TGG | 0.517709 | 6.4:-63700792 | None:intergenic |
| TGTAAAACCGCATCCCTCAC+TGG | 0.518045 | 6.4:-63700162 | None:intergenic |
| GCCAGAACCAATGCTAGAAA+TGG | 0.519664 | 6.4:+63701996 | MS.gene064081:CDS |
| CAACTTATTACTTCCTCTAA+CGG | 0.520424 | 6.4:-63700970 | None:intergenic |
| CCAGATTCTTCTGTTAGAGA+AGG | 0.522317 | 6.4:+63699547 | MS.gene064081:CDS |
| CACATCAATGTTGTGTACAA+AGG | 0.523686 | 6.4:+63701073 | MS.gene064081:CDS |
| AATAGGTGTATTATTCAGGC+TGG | 0.528873 | 6.4:+63699838 | MS.gene064081:CDS |
| TTCTACAATCCAATCAAGAA+TGG | 0.529982 | 6.4:+63701587 | MS.gene064081:CDS |
| TGTTACAAGCATGCAGGATG+TGG | 0.535835 | 6.4:+63700820 | MS.gene064081:CDS |
| AATGTACTCCATAAAGATGC+AGG | 0.536807 | 6.4:+63701002 | MS.gene064081:CDS |
| AAGGAGGATCCAGTTTCTGA+AGG | 0.539883 | 6.4:-63700231 | None:intergenic |
| TGTAATTTGGGGACTTGACT+CGG | 0.540972 | 6.4:-63701052 | None:intergenic |
| CTCCAGCATGAATCCTCGGT+TGG | 0.542014 | 6.4:-63701833 | None:intergenic |
| TGGGCCTATGGATGACAAGC+AGG | 0.545178 | 6.4:+63700853 | MS.gene064081:CDS |
| AACATCTCTATGTCTGGACT+CGG | 0.546866 | 6.4:-63700582 | None:intergenic |
| CATGACTGCTTTGTAAACAA+TGG | 0.547183 | 6.4:+63700919 | MS.gene064081:CDS |
| AGATGGCTTTGGAGTGCATA+CGG | 0.548202 | 6.4:-63701730 | None:intergenic |
| GGGTTATGAATATGGGCCTA+TGG | 0.549080 | 6.4:+63700841 | MS.gene064081:CDS |
| GAATCAAGGTAATGAAGATA+AGG | 0.552496 | 6.4:+63699609 | MS.gene064081:CDS |
| ATTGTTTACAAAGCAGTCAT+GGG | 0.553394 | 6.4:-63700917 | None:intergenic |
| CTTAATATGAAATCAACTAC+GGG | 0.555405 | 6.4:+63700617 | MS.gene064081:CDS |
| CTATCTCCAGCATGAATCCT+CGG | 0.562259 | 6.4:-63701837 | None:intergenic |
| TCTCAAGAATCTTTAAAAGG+AGG | 0.564666 | 6.4:+63701639 | MS.gene064081:CDS |
| AGCATTGGTTCTGGCAGCAG+AGG | 0.565867 | 6.4:-63701988 | None:intergenic |
| CAGAAAACTCCAAATTTGTG+AGG | 0.569734 | 6.4:+63701676 | MS.gene064081:CDS |
| ACAATCCAATCAAGAATGGT+AGG | 0.573841 | 6.4:+63701591 | MS.gene064081:CDS |
| GCAGGTTTCGCCATAAAATG+TGG | 0.574624 | 6.4:-63699802 | None:intergenic |
| AGGATGTGGGTTATGAATAT+GGG | 0.575148 | 6.4:+63700834 | MS.gene064081:CDS |
| GGCTGTTGGTAGTATTAGAG+AGG | 0.583720 | 6.4:+63699891 | MS.gene064081:CDS |
| AGCCAACCGAGGATTCATGC+TGG | 0.584954 | 6.4:+63701831 | MS.gene064081:CDS |
| TGATTCCTCGAGGTTTGACA+AGG | 0.586369 | 6.4:+63700029 | MS.gene064081:CDS |
| GGATCCAGTTTCTGAAGGCT+CGG | 0.586766 | 6.4:-63700226 | None:intergenic |
| AGGTTGTATTGAAATGTTCG+CGG | 0.587532 | 6.4:+63699567 | MS.gene064081:CDS |
| TTCATTCTCTTGATTCCTCG+AGG | 0.588058 | 6.4:+63700019 | MS.gene064081:CDS |
| AGGTGTATTATTCAGGCTGG+TGG | 0.594436 | 6.4:+63699841 | MS.gene064081:CDS |
| GAGAATGCAAGAGAGGAATG+AGG | 0.599531 | 6.4:-63699386 | None:intergenic |
| TCAAGACTCATTGTTTGTAG+CGG | 0.603027 | 6.4:-63700797 | None:intergenic |
| ATCTCTATGTCTGGACTCGG+TGG | 0.603533 | 6.4:-63700579 | None:intergenic |
| AACGAGAATAAGTTCGTCAC+CGG | 0.604731 | 6.4:-63702114 | None:intergenic |
| GGAGTGCATACGGAGATCCT+GGG | 0.608022 | 6.4:-63701720 | None:intergenic |
| CCCCAGAACACATTCTGTAG+TGG | 0.608984 | 6.4:+63700733 | MS.gene064081:CDS |
| CAACATTGATGTGTAATTTG+GGG | 0.611777 | 6.4:-63701063 | None:intergenic |
| AATGCAATTTGGTCCGTGGA+CGG | 0.613979 | 6.4:-63702686 | None:intergenic |
| TTAGCACCGTATCTTCTGGA+AGG | 0.614062 | 6.4:+63702209 | MS.gene064081:CDS |
| GGTGAAACCAGTGAGGGATG+CGG | 0.615202 | 6.4:+63700155 | MS.gene064081:intron |
| GGATAATTTGAACTGCTTAG+GGG | 0.616156 | 6.4:+63701911 | MS.gene064081:CDS |
| GATTCATGCTGGAGATAGTG+TGG | 0.617649 | 6.4:+63701842 | MS.gene064081:CDS |
| TAATTTGAACTGCTTAGGGG+AGG | 0.618224 | 6.4:+63701914 | MS.gene064081:CDS |
| GTTGAAATGAGCACCGTCCA+CGG | 0.618871 | 6.4:+63702673 | MS.gene064081:CDS |
| GAGCAATGCAATTTGGTCCG+TGG | 0.621953 | 6.4:-63702690 | None:intergenic |
| TCTCACCAAAATTGTTGCTG+CGG | 0.626501 | 6.4:+63699504 | MS.gene064081:CDS |
| GGATATGTGTAAAAGTTACA+AGG | 0.626865 | 6.4:+63701863 | MS.gene064081:CDS |
| ATATGAAATCAACTACGGGA+AGG | 0.627700 | 6.4:+63700621 | MS.gene064081:CDS |
| GCTGTTGGTAGTATTAGAGA+GGG | 0.629368 | 6.4:+63699892 | MS.gene064081:CDS |
| GAATGTCGAGAATGCAAGAG+AGG | 0.629620 | 6.4:-63699393 | None:intergenic |
| GGCTCGGTAGTATAATGACC+CGG | 0.630775 | 6.4:-63700210 | None:intergenic |
| CACTCCTGCTTGTCATCCAT+AGG | 0.633163 | 6.4:-63700857 | None:intergenic |
| TGGAATGTGGAGTTAATGAG+TGG | 0.637506 | 6.4:-63699360 | None:intergenic |
| TCTTGATGTTACAAGCATGC+AGG | 0.641520 | 6.4:+63700814 | MS.gene064081:CDS |
| TAGTTTGTGTTACTCTCGGG+AGG | 0.642716 | 6.4:-63702023 | None:intergenic |
| GGATTGGAAAACACGTAAAG+CGG | 0.647564 | 6.4:+63699927 | MS.gene064081:CDS |
| TATAAGAGATTCATAAACAG+TGG | 0.652703 | 6.4:-63699473 | None:intergenic |
| ATTATAGGTGAAACCAGTGA+GGG | 0.652743 | 6.4:+63700149 | MS.gene064081:intron |
| CAAAGGTAAACCTTTGAAGG+AGG | 0.653235 | 6.4:-63700247 | None:intergenic |
| CTGGTATTGTACAAAACACG+CGG | 0.655159 | 6.4:+63699719 | MS.gene064081:CDS |
| CTATTCAACTCAATCAACGC+AGG | 0.655568 | 6.4:-63699820 | None:intergenic |
| TCTACAGAAAATATCTGCGG+AGG | 0.664334 | 6.4:+63700524 | MS.gene064081:intron |
| CCATACAAAACCGAAACAGG+AGG | 0.673672 | 6.4:-63699745 | None:intergenic |
| GTTACAAGCATGCAGGATGT+GGG | 0.676382 | 6.4:+63700821 | MS.gene064081:CDS |
| TATCTGCGGAGGTGACTCTG+TGG | 0.685008 | 6.4:+63700535 | MS.gene064081:CDS |
| CTTTCTACAGAAAATATCTG+CGG | 0.688105 | 6.4:+63700521 | MS.gene064081:intron |
| GACTGCCCCAAAAGTCAGAG+AGG | 0.694271 | 6.4:+63701890 | MS.gene064081:CDS |
| GATTATAGGTGAAACCAGTG+AGG | 0.696142 | 6.4:+63700148 | MS.gene064081:intron |
| CCACTACAGAATGTGTTCTG+GGG | 0.711381 | 6.4:-63700733 | None:intergenic |
| GTGAATCGTCTTGTATGTGA+AGG | 0.716670 | 6.4:+63702056 | MS.gene064081:CDS |
| AATCACCTTGTCAAACCTCG+AGG | 0.724129 | 6.4:-63700034 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTGAAAAATAACTAATTA+AGG | + | chr6.4:63702333-63702352 | MS.gene064081:intron | 10.0% |
| !! | ATATATTAATAATCGATTAT+AGG | + | chr6.4:63700134-63700153 | MS.gene064081:intron | 10.0% |
| !! | TACACTTATAATTTAGTTAA+CGG | - | chr6.4:63700115-63700134 | None:intergenic | 15.0% |
| !!! | AATATGAATATTGTAACTTT+TGG | + | chr6.4:63701430-63701449 | MS.gene064081:intron | 15.0% |
| !!! | TAATTTTTATTTTCTTCTGA+TGG | + | chr6.4:63702455-63702474 | MS.gene064081:intron | 15.0% |
| !!! | TTGATTTCATATTAAGTTTT+TGG | - | chr6.4:63700613-63700632 | None:intergenic | 15.0% |
| !! | ACTTAATATGAAATCAACTA+CGG | + | chr6.4:63700616-63700635 | MS.gene064081:CDS | 20.0% |
| !! | AGGATATATATAAAGACATT+TGG | + | chr6.4:63700323-63700342 | MS.gene064081:intron | 20.0% |
| !! | CAATAAAATTACATCATATC+TGG | + | chr6.4:63702812-63702831 | MS.gene064081:CDS | 20.0% |
| !! | GATATCAAAATTCAAAAAGA+GGG | - | chr6.4:63700281-63700300 | None:intergenic | 20.0% |
| !! | TGATATCAAAATTCAAAAAG+AGG | - | chr6.4:63700282-63700301 | None:intergenic | 20.0% |
| !! | TTATCTCAAGAATCTTTAAA+AGG | + | chr6.4:63701636-63701655 | MS.gene064081:CDS | 20.0% |
| !! | TTTGATATCAATATTGCTAT+TGG | + | chr6.4:63700292-63700311 | MS.gene064081:intron | 20.0% |
| !!! | TTTTACAAGCTCTTAAATAT+TGG | + | chr6.4:63700178-63700197 | MS.gene064081:CDS | 20.0% |
| ! | AAACAAGAACACTATCTAAT+TGG | - | chr6.4:63700363-63700382 | None:intergenic | 25.0% |
| ! | AACAAGAACACTATCTAATT+GGG | - | chr6.4:63700362-63700381 | None:intergenic | 25.0% |
| ! | ACAACATTGATGTGTAATTT+GGG | - | chr6.4:63701067-63701086 | None:intergenic | 25.0% |
| ! | ATAAATGAGCTACTGTATAT+CGG | - | chr6.4:63701253-63701272 | None:intergenic | 25.0% |
| ! | ATGGATAAACTTTCTATAAC+TGG | - | chr6.4:63702161-63702180 | None:intergenic | 25.0% |
| ! | CTTAATATGAAATCAACTAC+GGG | + | chr6.4:63700617-63700636 | MS.gene064081:CDS | 25.0% |
| ! | GTTAAACAATTTAATAACCC+AGG | - | chr6.4:63702549-63702568 | None:intergenic | 25.0% |
| ! | TAAATATTGGAAAATGCTTC+CGG | + | chr6.4:63700191-63700210 | MS.gene064081:CDS | 25.0% |
| ! | TATAAGAGATTCATAAACAG+TGG | - | chr6.4:63699476-63699495 | None:intergenic | 25.0% |
| ! | TGATTGCTAATCTTATACAT+TGG | + | chr6.4:63700470-63700489 | MS.gene064081:intron | 25.0% |
| ! | TTCAGATATTGAAATCAAAC+AGG | + | chr6.4:63701128-63701147 | MS.gene064081:CDS | 25.0% |
| !! | AATGCTTTGAATACCATTTA+AGG | - | chr6.4:63702396-63702415 | None:intergenic | 25.0% |
| !! | ATATCAATATTGCTATTGGT+TGG | + | chr6.4:63700296-63700315 | MS.gene064081:intron | 25.0% |
| !! | CAAATGAAATGACTTGTATT+CGG | + | chr6.4:63701097-63701116 | MS.gene064081:CDS | 25.0% |
| !! | TGGAAAAAAGATCATTTTCA+AGG | + | chr6.4:63701808-63701827 | MS.gene064081:CDS | 25.0% |
| !! | TTTGAGAGATTGTTTTCTAA+TGG | - | chr6.4:63699437-63699456 | None:intergenic | 25.0% |
| !!! | AAATTTGGAGTTTTCTGAAA+AGG | - | chr6.4:63701673-63701692 | None:intergenic | 25.0% |
| !!! | ATCATTGATAATGCAAATGT+AGG | + | chr6.4:63702570-63702589 | MS.gene064081:intron | 25.0% |
| !!! | ATGTTAGTCTTTCTTGTTTT+AGG | + | chr6.4:63702648-63702667 | MS.gene064081:intron | 25.0% |
| !!! | CTTTTTCAGATTTTTACAAC+TGG | + | chr6.4:63701549-63701568 | MS.gene064081:intron | 25.0% |
| !!! | TTTTGTATGGTATGTTGATT+AGG | + | chr6.4:63699758-63699777 | MS.gene064081:CDS | 25.0% |
| AAAGCATGTCAAAATGATGT+TGG | + | chr6.4:63700662-63700681 | MS.gene064081:CDS | 30.0% | |
| AAATAACTGATATACTTCCC+AGG | - | chr6.4:63702628-63702647 | None:intergenic | 30.0% | |
| AAATATTGGAAAATGCTTCC+GGG | + | chr6.4:63700192-63700211 | MS.gene064081:CDS | 30.0% | |
| ACATCAATGTTGTGTACAAA+GGG | + | chr6.4:63701074-63701093 | MS.gene064081:CDS | 30.0% | |
| AGATCTAAACTCTGCATATA+TGG | + | chr6.4:63702079-63702098 | MS.gene064081:CDS | 30.0% | |
| AGGATAATTTGAACTGCTTA+GGG | + | chr6.4:63701910-63701929 | MS.gene064081:CDS | 30.0% | |
| ATTGAAAGAGCAATGCAATT+TGG | - | chr6.4:63702700-63702719 | None:intergenic | 30.0% | |
| ATTGTTTACAAAGCAGTCAT+GGG | - | chr6.4:63700920-63700939 | None:intergenic | 30.0% | |
| CAACATTGATGTGTAATTTG+GGG | - | chr6.4:63701066-63701085 | None:intergenic | 30.0% | |
| CAACTTATTACTTCCTCTAA+CGG | - | chr6.4:63700973-63700992 | None:intergenic | 30.0% | |
| CACAACATTGATGTGTAATT+TGG | - | chr6.4:63701068-63701087 | None:intergenic | 30.0% | |
| CACAATGCATTAAACAAAGT+TGG | + | chr6.4:63699289-63699308 | MS.gene064081:CDS | 30.0% | |
| CTTTCTACAGAAAATATCTG+CGG | + | chr6.4:63700521-63700540 | MS.gene064081:intron | 30.0% | |
| GAATCAAGGTAATGAAGATA+AGG | + | chr6.4:63699609-63699628 | MS.gene064081:CDS | 30.0% | |
| GGATATGTGTAAAAGTTACA+AGG | + | chr6.4:63701863-63701882 | MS.gene064081:CDS | 30.0% | |
| GTTGAATAGGTGTATTATTC+AGG | + | chr6.4:63699834-63699853 | MS.gene064081:CDS | 30.0% | |
| TAAACTTTCTATAACTGGAC+CGG | - | chr6.4:63702156-63702175 | None:intergenic | 30.0% | |
| TACTCTCAAACTCTTCATTA+TGG | - | chr6.4:63700763-63700782 | None:intergenic | 30.0% | |
| TCTTGATTGGATTGTAGAAA+GGG | - | chr6.4:63701586-63701605 | None:intergenic | 30.0% | |
| TTCGTTCTTGTCATCTTTAA+GGG | + | chr6.4:63699987-63700006 | MS.gene064081:CDS | 30.0% | |
| TTCTACAATCCAATCAAGAA+TGG | + | chr6.4:63701587-63701606 | MS.gene064081:CDS | 30.0% | |
| TTCTTGATTGGATTGTAGAA+AGG | - | chr6.4:63701587-63701606 | None:intergenic | 30.0% | |
| ! | AAATTATCCTCTCTGACTTT+TGG | - | chr6.4:63701900-63701919 | None:intergenic | 30.0% |
| ! | AAGAACATTGACAGTTTTCA+TGG | - | chr6.4:63702180-63702199 | None:intergenic | 30.0% |
| ! | AATTATCCTCTCTGACTTTT+GGG | - | chr6.4:63701899-63701918 | None:intergenic | 30.0% |
| ! | AGAGATTGTTTTCTAATGGA+AGG | - | chr6.4:63699433-63699452 | None:intergenic | 30.0% |
| ! | ATTGTATTTTTCACATGGCA+TGG | - | chr6.4:63702494-63702513 | None:intergenic | 30.0% |
| ! | ATTTGAAGTAATGTCCGAAA+TGG | + | chr6.4:63701472-63701491 | MS.gene064081:intron | 30.0% |
| ! | ATTTTTCCTTCCAGAAGATA+CGG | - | chr6.4:63702218-63702237 | None:intergenic | 30.0% |
| ! | GATTTTTACAACTGGCATAA+TGG | + | chr6.4:63701557-63701576 | MS.gene064081:intron | 30.0% |
| ! | GCTTAAGAATCCACATTTTA+TGG | + | chr6.4:63699792-63699811 | MS.gene064081:CDS | 30.0% |
| ! | GCTTTTATATGCAATTCAAG+AGG | + | chr6.4:63702735-63702754 | MS.gene064081:CDS | 30.0% |
| ! | TATTGCTATTGGTTGGAATA+AGG | + | chr6.4:63700303-63700322 | MS.gene064081:intron | 30.0% |
| ! | TCTCAAGAATCTTTAAAAGG+AGG | + | chr6.4:63701639-63701658 | MS.gene064081:CDS | 30.0% |
| ! | TGCACATTGTATTTTTCACA+TGG | - | chr6.4:63702499-63702518 | None:intergenic | 30.0% |
| ! | TGCGGTTGTTAAATGTTTTA+GGG | + | chr6.4:63699522-63699541 | MS.gene064081:CDS | 30.0% |
| ! | TTAGTACTAGTTTCTGAAGA+TGG | - | chr6.4:63701750-63701769 | None:intergenic | 30.0% |
| ! | TTTTCAATACCATAATCCCA+TGG | + | chr6.4:63702237-63702256 | MS.gene064081:CDS | 30.0% |
| !!! | TCTAATGGAAGGTTTTAGTT+CGG | - | chr6.4:63699422-63699441 | None:intergenic | 30.0% |
| AAACATGATGCATCAGTTAC+AGG | + | chr6.4:63701152-63701171 | MS.gene064081:CDS | 35.0% | |
| AATAGGTGTATTATTCAGGC+TGG | + | chr6.4:63699838-63699857 | MS.gene064081:CDS | 35.0% | |
| AATATATACCACATACCGTG+TGG | - | chr6.4:63701509-63701528 | None:intergenic | 35.0% | |
| AATGTACTCCATAAAGATGC+AGG | + | chr6.4:63701002-63701021 | MS.gene064081:CDS | 35.0% | |
| ACAATCCAATCAAGAATGGT+AGG | + | chr6.4:63701591-63701610 | MS.gene064081:CDS | 35.0% | |
| AGGTTGTATTGAAATGTTCG+CGG | + | chr6.4:63699567-63699586 | MS.gene064081:CDS | 35.0% | |
| ATACCATACAAAACCGAAAC+AGG | - | chr6.4:63699751-63699770 | None:intergenic | 35.0% | |
| ATATGAAATCAACTACGGGA+AGG | + | chr6.4:63700621-63700640 | MS.gene064081:CDS | 35.0% | |
| ATTATAGGTGAAACCAGTGA+GGG | + | chr6.4:63700149-63700168 | MS.gene064081:intron | 35.0% | |
| CACATCAATGTTGTGTACAA+AGG | + | chr6.4:63701073-63701092 | MS.gene064081:CDS | 35.0% | |
| CAGAAAACTCCAAATTTGTG+AGG | + | chr6.4:63701676-63701695 | MS.gene064081:CDS | 35.0% | |
| CATGACTGCTTTGTAAACAA+TGG | + | chr6.4:63700919-63700938 | MS.gene064081:CDS | 35.0% | |
| CATTGTTTACAAAGCAGTCA+TGG | - | chr6.4:63700921-63700940 | None:intergenic | 35.0% | |
| CTTCGTTCTTGTCATCTTTA+AGG | + | chr6.4:63699986-63700005 | MS.gene064081:CDS | 35.0% | |
| GAAACTAGTACTAAGCAATC+AGG | + | chr6.4:63701756-63701775 | MS.gene064081:CDS | 35.0% | |
| GAGGATAATTTGAACTGCTT+AGG | + | chr6.4:63701909-63701928 | MS.gene064081:CDS | 35.0% | |
| GATATACTTCCCAGGTTATT+CGG | - | chr6.4:63702620-63702639 | None:intergenic | 35.0% | |
| GGATAATTTGAACTGCTTAG+GGG | + | chr6.4:63701911-63701930 | MS.gene064081:CDS | 35.0% | |
| GGTGAAAAGTAGTGAAAGTT+TGG | + | chr6.4:63701788-63701807 | MS.gene064081:CDS | 35.0% | |
| GTTGAGCTTCTGAATAAAAC+CGG | + | chr6.4:63702134-63702153 | MS.gene064081:CDS | 35.0% | |
| TAGAGAGGGTTTGAAAGATA+CGG | + | chr6.4:63699906-63699925 | MS.gene064081:CDS | 35.0% | |
| TCAAGACTCATTGTTTGTAG+CGG | - | chr6.4:63700800-63700819 | None:intergenic | 35.0% | |
| TGGTGTAACAAGAACCATTT+CGG | - | chr6.4:63701489-63701508 | None:intergenic | 35.0% | |
| ! | ACATTTTTGTTGCATCTTCG+TGG | + | chr6.4:63702366-63702385 | MS.gene064081:intron | 35.0% |
| ! | ACTGTCGAATCAGAACTTTT+AGG | - | chr6.4:63701030-63701049 | None:intergenic | 35.0% |
| ! | AGGATGTGGGTTATGAATAT+GGG | + | chr6.4:63700834-63700853 | MS.gene064081:CDS | 35.0% |
| ! | ATTATCCTCTCTGACTTTTG+GGG | - | chr6.4:63701898-63701917 | None:intergenic | 35.0% |
| ! | CATGCTTTTCTTACAGACAA+AGG | - | chr6.4:63700650-63700669 | None:intergenic | 35.0% |
| ! | CATGTAGTGGAAAGTAAACA+AGG | - | chr6.4:63701289-63701308 | None:intergenic | 35.0% |
| ! | CTGCGGTTGTTAAATGTTTT+AGG | + | chr6.4:63699521-63699540 | MS.gene064081:CDS | 35.0% |
| ! | TATATGGAAGCTTTGTGTTC+CGG | + | chr6.4:63702095-63702114 | MS.gene064081:CDS | 35.0% |
| ! | TTTAGGATCCTGCATCTTTA+TGG | - | chr6.4:63701013-63701032 | None:intergenic | 35.0% |
| !! | ATTACTACTCAGCTTGTTGT+TGG | - | chr6.4:63699248-63699267 | None:intergenic | 35.0% |
| !! | CAACAATTTTGGTGAGATGT+GGG | - | chr6.4:63699501-63699520 | None:intergenic | 35.0% |
| !! | GAGAATTGTTTCGAGTTCTT+TGG | - | chr6.4:63699341-63699360 | None:intergenic | 35.0% |
| !! | GCTTTGAAATTAGCGAATCA+AGG | + | chr6.4:63699595-63699614 | MS.gene064081:CDS | 35.0% |
| !! | TAAGCAATCAGGCTTGTTTT+CGG | + | chr6.4:63701767-63701786 | MS.gene064081:CDS | 35.0% |
| AAAAGAGGGAGAAAGAGCAA+AGG | - | chr6.4:63700267-63700286 | None:intergenic | 40.0% | |
| AACATCTCTATGTCTGGACT+CGG | - | chr6.4:63700585-63700604 | None:intergenic | 40.0% | |
| AACGAGAATAAGTTCGTCAC+CGG | - | chr6.4:63702117-63702136 | None:intergenic | 40.0% | |
| ACAAGGTGATTTCTCACTCT+CGG | + | chr6.4:63700046-63700065 | MS.gene064081:intron | 40.0% | |
| AGGGTTTGAAAGATACGGAT+TGG | + | chr6.4:63699911-63699930 | MS.gene064081:CDS | 40.0% | |
| AGTCCAGACATAGAGATGTT+AGG | + | chr6.4:63700585-63700604 | MS.gene064081:CDS | 40.0% | |
| ATGGTTCTTGTTACACCACA+CGG | + | chr6.4:63701491-63701510 | MS.gene064081:intron | 40.0% | |
| CCAGATTCTTCTGTTAGAGA+AGG | + | chr6.4:63699547-63699566 | MS.gene064081:CDS | 40.0% | |
| CCTTCTCTAACAGAAGAATC+TGG | - | chr6.4:63699550-63699569 | None:intergenic | 40.0% | |
| CTATTCAACTCAATCAACGC+AGG | - | chr6.4:63699823-63699842 | None:intergenic | 40.0% | |
| CTGGTATTGTACAAAACACG+CGG | + | chr6.4:63699719-63699738 | MS.gene064081:CDS | 40.0% | |
| GAGCAAAGGTAAACCTTTGA+AGG | - | chr6.4:63700253-63700272 | None:intergenic | 40.0% | |
| GATTATAGGTGAAACCAGTG+AGG | + | chr6.4:63700148-63700167 | MS.gene064081:intron | 40.0% | |
| GGATTGGAAAACACGTAAAG+CGG | + | chr6.4:63699927-63699946 | MS.gene064081:CDS | 40.0% | |
| GTCATCCCAAAAGAGATGAT+TGG | + | chr6.4:63700693-63700712 | MS.gene064081:CDS | 40.0% | |
| GTGAATCGTCTTGTATGTGA+AGG | + | chr6.4:63702056-63702075 | MS.gene064081:CDS | 40.0% | |
| TAATTTGAACTGCTTAGGGG+AGG | + | chr6.4:63701914-63701933 | MS.gene064081:CDS | 40.0% | |
| TCCACTACAGAATGTGTTCT+GGG | - | chr6.4:63700737-63700756 | None:intergenic | 40.0% | |
| TCTACAGAAAATATCTGCGG+AGG | + | chr6.4:63700524-63700543 | MS.gene064081:intron | 40.0% | |
| TCTCACCAAAATTGTTGCTG+CGG | + | chr6.4:63699504-63699523 | MS.gene064081:CDS | 40.0% | |
| TCTGCTCAAGTGAGAAAGAA+TGG | + | chr6.4:63701954-63701973 | MS.gene064081:CDS | 40.0% | |
| TCTTCGTGGCATACCTTAAA+TGG | + | chr6.4:63702380-63702399 | MS.gene064081:intron | 40.0% | |
| TCTTGATGTTACAAGCATGC+AGG | + | chr6.4:63700814-63700833 | MS.gene064081:CDS | 40.0% | |
| TGGAATGTGGAGTTAATGAG+TGG | - | chr6.4:63699363-63699382 | None:intergenic | 40.0% | |
| TGTAATTTGGGGACTTGACT+CGG | - | chr6.4:63701055-63701074 | None:intergenic | 40.0% | |
| TTCATTCTCTTGATTCCTCG+AGG | + | chr6.4:63700019-63700038 | MS.gene064081:CDS | 40.0% | |
| TTCCACTACAGAATGTGTTC+TGG | - | chr6.4:63700738-63700757 | None:intergenic | 40.0% | |
| TTTAATAACCCAGGCCTGTT+TGG | - | chr6.4:63702540-63702559 | None:intergenic | 40.0% | |
| ! | AACAACCGCAGCAACAATTT+TGG | - | chr6.4:63699512-63699531 | None:intergenic | 40.0% |
| ! | AACGGTTTGCTTCTCACATT+TGG | - | chr6.4:63700955-63700974 | None:intergenic | 40.0% |
| ! | AACGTGCCAATCATCTCTTT+TGG | - | chr6.4:63700702-63700721 | None:intergenic | 40.0% |
| ! | ACGTGCCAATCATCTCTTTT+GGG | - | chr6.4:63700701-63700720 | None:intergenic | 40.0% |
| ! | CAAAGGTAAACCTTTGAAGG+AGG | - | chr6.4:63700250-63700269 | None:intergenic | 40.0% |
| ! | CAGGATGTGGGTTATGAATA+TGG | + | chr6.4:63700833-63700852 | MS.gene064081:CDS | 40.0% |
| ! | CAGTAGTTTGTGTTACTCTC+GGG | - | chr6.4:63702029-63702048 | None:intergenic | 40.0% |
| ! | CCAGTAGTTTGTGTTACTCT+CGG | - | chr6.4:63702030-63702049 | None:intergenic | 40.0% |
| ! | CCTATTTTCGATGCTCTTGT+TGG | + | chr6.4:63699652-63699671 | MS.gene064081:CDS | 40.0% |
| ! | CTAGTTTCTGAAGATGGCTT+TGG | - | chr6.4:63701744-63701763 | None:intergenic | 40.0% |
| ! | CTTGAAGCGTTATCATGTAG+TGG | - | chr6.4:63701302-63701321 | None:intergenic | 40.0% |
| ! | TTGCTTCTCACATTTGGCTT+CGG | - | chr6.4:63700949-63700968 | None:intergenic | 40.0% |
| ! | TTTTCAGCCATGCAGAAAAG+AGG | + | chr6.4:63702773-63702792 | MS.gene064081:CDS | 40.0% |
| !! | ACCATTTCTAGCATTGGTTC+TGG | - | chr6.4:63702000-63702019 | None:intergenic | 40.0% |
| !! | AGGACAACCATTTCTAGCAT+TGG | - | chr6.4:63702006-63702025 | None:intergenic | 40.0% |
| !! | ATCGCTTTTACCGAATAACC+TGG | + | chr6.4:63702607-63702626 | MS.gene064081:intron | 40.0% |
| !! | CCAACAAGAGCATCGAAAAT+AGG | - | chr6.4:63699655-63699674 | None:intergenic | 40.0% |
| !! | CTGCGTTGATTGAGTTGAAT+AGG | + | chr6.4:63699821-63699840 | MS.gene064081:CDS | 40.0% |
| !! | GCAACAATTTTGGTGAGATG+TGG | - | chr6.4:63699502-63699521 | None:intergenic | 40.0% |
| !! | GCTGTTGGTAGTATTAGAGA+GGG | + | chr6.4:63699892-63699911 | MS.gene064081:CDS | 40.0% |
| !! | TCGCTTTTACCGAATAACCT+GGG | + | chr6.4:63702608-63702627 | MS.gene064081:intron | 40.0% |
| AAGGAGGATCCAGTTTCTGA+AGG | - | chr6.4:63700234-63700253 | None:intergenic | 45.0% | |
| AATCACCTTGTCAAACCTCG+AGG | - | chr6.4:63700037-63700056 | None:intergenic | 45.0% | |
| AATGCAATTTGGTCCGTGGA+CGG | - | chr6.4:63702689-63702708 | None:intergenic | 45.0% | |
| ACTCATTGTTTGTAGCGGCT+TGG | - | chr6.4:63700795-63700814 | None:intergenic | 45.0% | |
| AGGAATGAGGAGATGGAATG+TGG | - | chr6.4:63699376-63699395 | None:intergenic | 45.0% | |
| AGGTGTATTATTCAGGCTGG+TGG | + | chr6.4:63699841-63699860 | MS.gene064081:CDS | 45.0% | |
| CACTTTAGCACCGTATCTTC+TGG | + | chr6.4:63702205-63702224 | MS.gene064081:CDS | 45.0% | |
| CCAAGCCTACCATTCTTGAT+TGG | - | chr6.4:63701599-63701618 | None:intergenic | 45.0% | |
| CCAATCAAGAATGGTAGGCT+TGG | + | chr6.4:63701596-63701615 | MS.gene064081:CDS | 45.0% | |
| CCACTACAGAATGTGTTCTG+GGG | - | chr6.4:63700736-63700755 | None:intergenic | 45.0% | |
| CCATACAAAACCGAAACAGG+AGG | - | chr6.4:63699748-63699767 | None:intergenic | 45.0% | |
| CCGAGAGTAACACAAACTAC+TGG | + | chr6.4:63702027-63702046 | MS.gene064081:CDS | 45.0% | |
| CTATCTCCAGCATGAATCCT+CGG | - | chr6.4:63701840-63701859 | None:intergenic | 45.0% | |
| GAAACTGGATCCTCCTTCAA+AGG | + | chr6.4:63700237-63700256 | MS.gene064081:CDS | 45.0% | |
| GAATGTCGAGAATGCAAGAG+AGG | - | chr6.4:63699396-63699415 | None:intergenic | 45.0% | |
| GAGAATGCAAGAGAGGAATG+AGG | - | chr6.4:63699389-63699408 | None:intergenic | 45.0% | |
| GAGCCTAACATCTCTATGTC+TGG | - | chr6.4:63700591-63700610 | None:intergenic | 45.0% | |
| GATCGAGACACACACGATAT+CGG | + | chr6.4:63699313-63699332 | MS.gene064081:CDS | 45.0% | |
| GATTCATGCTGGAGATAGTG+TGG | + | chr6.4:63701842-63701861 | MS.gene064081:CDS | 45.0% | |
| GCAGGTTTCGCCATAAAATG+TGG | - | chr6.4:63699805-63699824 | None:intergenic | 45.0% | |
| GCCAGAACCAATGCTAGAAA+TGG | + | chr6.4:63701996-63702015 | MS.gene064081:CDS | 45.0% | |
| GGGTTATGAATATGGGCCTA+TGG | + | chr6.4:63700841-63700860 | MS.gene064081:CDS | 45.0% | |
| GTTACAAGCATGCAGGATGT+GGG | + | chr6.4:63700821-63700840 | MS.gene064081:CDS | 45.0% | |
| TGATTCCTCGAGGTTTGACA+AGG | + | chr6.4:63700029-63700048 | MS.gene064081:CDS | 45.0% | |
| TGCGTTGGGACAAATTGCTT+TGG | + | chr6.4:63699957-63699976 | MS.gene064081:CDS | 45.0% | |
| TGTGAGAAGCAAACCGTTAG+AGG | + | chr6.4:63700957-63700976 | MS.gene064081:CDS | 45.0% | |
| TGTTACAAGCATGCAGGATG+TGG | + | chr6.4:63700820-63700839 | MS.gene064081:CDS | 45.0% | |
| TTAGCACCGTATCTTCTGGA+AGG | + | chr6.4:63702209-63702228 | MS.gene064081:CDS | 45.0% | |
| TTGTTACACCACACGGTATG+TGG | + | chr6.4:63701498-63701517 | MS.gene064081:intron | 45.0% | |
| ! | AGTGTTCTTTTGACGGCTGT+TGG | + | chr6.4:63699877-63699896 | MS.gene064081:CDS | 45.0% |
| ! | TAGTTTGTGTTACTCTCGGG+AGG | - | chr6.4:63702026-63702045 | None:intergenic | 45.0% |
| !! | AGATGGCTTTGGAGTGCATA+CGG | - | chr6.4:63701733-63701752 | None:intergenic | 45.0% |
| !! | CCTCCTGTTTCGGTTTTGTA+TGG | + | chr6.4:63699745-63699764 | MS.gene064081:CDS | 45.0% |
| !! | GACGCAGAGTGTTCTTTTGA+CGG | + | chr6.4:63699870-63699889 | MS.gene064081:CDS | 45.0% |
| !! | GGCTGTTGGTAGTATTAGAG+AGG | + | chr6.4:63699891-63699910 | MS.gene064081:CDS | 45.0% |
| !! | TTGGCTCTGCCTCACAAATT+TGG | - | chr6.4:63701688-63701707 | None:intergenic | 45.0% |
| AAAGCGGCTTCTGTTGCGTT+GGG | + | chr6.4:63699943-63699962 | MS.gene064081:CDS | 50.0% | |
| ACTACCGAGCCTTCAGAAAC+TGG | + | chr6.4:63700222-63700241 | MS.gene064081:CDS | 50.0% | |
| ATCTCTATGTCTGGACTCGG+TGG | - | chr6.4:63700582-63700601 | None:intergenic | 50.0% | |
| CACTCCTGCTTGTCATCCAT+AGG | - | chr6.4:63700860-63700879 | None:intergenic | 50.0% | |
| CCCCAGAACACATTCTGTAG+TGG | + | chr6.4:63700733-63700752 | MS.gene064081:CDS | 50.0% | |
| CTTAACCAGTGCAGCCAAAC+AGG | + | chr6.4:63702523-63702542 | MS.gene064081:intron | 50.0% | |
| GAGCAATGCAATTTGGTCCG+TGG | - | chr6.4:63702693-63702712 | None:intergenic | 50.0% | |
| GCAAGAGAGGAATGAGGAGA+TGG | - | chr6.4:63699383-63699402 | None:intergenic | 50.0% | |
| TAAAGCGGCTTCTGTTGCGT+TGG | + | chr6.4:63699942-63699961 | MS.gene064081:CDS | 50.0% | |
| TGTAAAACCGCATCCCTCAC+TGG | - | chr6.4:63700165-63700184 | None:intergenic | 50.0% | |
| ! | GCTTCAGCGTTTTGTCTTGC+TGG | + | chr6.4:63699700-63699719 | MS.gene064081:CDS | 50.0% |
| ! | GGATCCAGTTTCTGAAGGCT+CGG | - | chr6.4:63700229-63700248 | None:intergenic | 50.0% |
| ! | GGCTCGGTAGTATAATGACC+CGG | - | chr6.4:63700213-63700232 | None:intergenic | 50.0% |
| ! | GTTGAAATGAGCACCGTCCA+CGG | + | chr6.4:63702673-63702692 | MS.gene064081:CDS | 50.0% |
| ! | TCCTGGGAGAAGCGACATTT+TGG | - | chr6.4:63701707-63701726 | None:intergenic | 50.0% |
| !! | CATTTTCAAGGAGCCAACCG+AGG | + | chr6.4:63701820-63701839 | MS.gene064081:CDS | 50.0% |
| AACTTGCCTGCTGCAGCCAT+GGG | - | chr6.4:63702256-63702275 | None:intergenic | 55.0% | |
| AGCCAACCGAGGATTCATGC+TGG | + | chr6.4:63701831-63701850 | MS.gene064081:CDS | 55.0% | |
| CACGCGGAATCCTCCTGTTT+CGG | + | chr6.4:63699735-63699754 | MS.gene064081:CDS | 55.0% | |
| CATAATCCCATGGCTGCAGC+AGG | + | chr6.4:63702247-63702266 | MS.gene064081:CDS | 55.0% | |
| CTCCAGCATGAATCCTCGGT+TGG | - | chr6.4:63701836-63701855 | None:intergenic | 55.0% | |
| CTGCTGCAGCCATGGGATTA+TGG | - | chr6.4:63702249-63702268 | None:intergenic | 55.0% | |
| GACTGCCCCAAAAGTCAGAG+AGG | + | chr6.4:63701890-63701909 | MS.gene064081:CDS | 55.0% | |
| GGAGTGCATACGGAGATCCT+GGG | - | chr6.4:63701723-63701742 | None:intergenic | 55.0% | |
| GGTGAAACCAGTGAGGGATG+CGG | + | chr6.4:63700155-63700174 | MS.gene064081:intron | 55.0% | |
| TATCTGCGGAGGTGACTCTG+TGG | + | chr6.4:63700535-63700554 | MS.gene064081:CDS | 55.0% | |
| TGGAGTGCATACGGAGATCC+TGG | - | chr6.4:63701724-63701743 | None:intergenic | 55.0% | |
| TGGGCCTATGGATGACAAGC+AGG | + | chr6.4:63700853-63700872 | MS.gene064081:CDS | 55.0% | |
| ! | CTGCACGCCTCTTTTCTGCA+TGG | - | chr6.4:63702783-63702802 | None:intergenic | 55.0% |
| ! | GCCAAAATGTCGCTTCTCCC+AGG | + | chr6.4:63701703-63701722 | MS.gene064081:CDS | 55.0% |
| !! | AGCATTGGTTCTGGCAGCAG+AGG | - | chr6.4:63701991-63702010 | None:intergenic | 55.0% |
| CAGTGCAGCCAAACAGGCCT+GGG | + | chr6.4:63702529-63702548 | MS.gene064081:intron | 60.0% | |
| GAACTTGCCTGCTGCAGCCA+TGG | - | chr6.4:63702257-63702276 | None:intergenic | 60.0% | |
| CCAGGCCTGTTTGGCTGCAC+TGG | - | chr6.4:63702531-63702550 | None:intergenic | 65.0% | |
| CCAGTGCAGCCAAACAGGCC+TGG | + | chr6.4:63702528-63702547 | MS.gene064081:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.4 | gene | 63699230 | 63702835 | 63699230 | ID=MS.gene064081 |
| chr6.4 | mRNA | 63699230 | 63702835 | 63699230 | ID=MS.gene064081.t1;Parent=MS.gene064081 |
| chr6.4 | exon | 63699230 | 63700050 | 63699230 | ID=MS.gene064081.t1.exon1;Parent=MS.gene064081.t1 |
| chr6.4 | CDS | 63699230 | 63700050 | 63699230 | ID=cds.MS.gene064081.t1;Parent=MS.gene064081.t1 |
| chr6.4 | exon | 63700156 | 63700258 | 63700156 | ID=MS.gene064081.t1.exon2;Parent=MS.gene064081.t1 |
| chr6.4 | CDS | 63700156 | 63700258 | 63700156 | ID=cds.MS.gene064081.t1;Parent=MS.gene064081.t1 |
| chr6.4 | exon | 63700531 | 63700878 | 63700531 | ID=MS.gene064081.t1.exon3;Parent=MS.gene064081.t1 |
| chr6.4 | CDS | 63700531 | 63700878 | 63700531 | ID=cds.MS.gene064081.t1;Parent=MS.gene064081.t1 |
| chr6.4 | exon | 63700908 | 63701173 | 63700908 | ID=MS.gene064081.t1.exon4;Parent=MS.gene064081.t1 |
| chr6.4 | CDS | 63700908 | 63701173 | 63700908 | ID=cds.MS.gene064081.t1;Parent=MS.gene064081.t1 |
| chr6.4 | exon | 63701558 | 63702268 | 63701558 | ID=MS.gene064081.t1.exon5;Parent=MS.gene064081.t1 |
| chr6.4 | CDS | 63701558 | 63702268 | 63701558 | ID=cds.MS.gene064081.t1;Parent=MS.gene064081.t1 |
| chr6.4 | exon | 63702670 | 63702835 | 63702670 | ID=MS.gene064081.t1.exon6;Parent=MS.gene064081.t1 |
| chr6.4 | CDS | 63702670 | 63702835 | 63702670 | ID=cds.MS.gene064081.t1;Parent=MS.gene064081.t1 |
| Gene Sequence |
| Protein sequence |
