Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065792.t1 | XP_013456629.1 | 98.5 | 342 | 5 | 0 | 1 | 342 | 1 | 342 | 8.00E-171 | 609.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065792.t1 | Q9FNY2 | 67.5 | 289 | 60 | 5 | 87 | 342 | 98 | 385 | 6.1e-95 | 349.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065792.t1 | A0A072UXQ9 | 98.5 | 342 | 5 | 0 | 1 | 342 | 1 | 342 | 5.7e-171 | 609.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene065792.t1 | TF | E2F-DP |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050105 | MS.gene065792 | 0.806789 | 6.93E-50 | -1.69E-46 |
| MS.gene051122 | MS.gene065792 | 0.81868 | 1.73E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene99648 | MS.gene065792 | PPI |
| MS.gene065792 | MS.gene81646 | PPI |
| MS.gene94307 | MS.gene065792 | PPI |
| MS.gene070538 | MS.gene065792 | PPI |
| MS.gene98552 | MS.gene065792 | PPI |
| MS.gene016712 | MS.gene065792 | PPI |
| MS.gene065792 | MS.gene94315 | PPI |
| MS.gene000128 | MS.gene065792 | PPI |
| MS.gene065792 | MS.gene069975 | PPI |
| MS.gene065792 | MS.gene09551 | PPI |
| MS.gene064876 | MS.gene065792 | PPI |
| MS.gene66836 | MS.gene065792 | PPI |
| MS.gene57177 | MS.gene065792 | PPI |
| MS.gene57178 | MS.gene065792 | PPI |
| MS.gene065792 | MS.gene20252 | PPI |
| MS.gene065792 | MS.gene024895 | PPI |
| MS.gene09552 | MS.gene065792 | PPI |
| MS.gene20253 | MS.gene065792 | PPI |
| MS.gene065792 | MS.gene015213 | PPI |
| MS.gene92318 | MS.gene065792 | PPI |
| MS.gene041917 | MS.gene065792 | PPI |
| MS.gene065792 | MS.gene91416 | PPI |
| MS.gene065792 | MS.gene80094 | PPI |
| MS.gene011754 | MS.gene065792 | PPI |
| MS.gene065792 | MS.gene44510 | PPI |
| MS.gene014301 | MS.gene065792 | PPI |
| MS.gene065792 | MS.gene015212 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065792.t1 | MTR_4g077797 | 98.830 | 342 | 4 | 0 | 1 | 342 | 1 | 342 | 0.0 | 699 |
| MS.gene065792.t1 | MTR_4g077803 | 84.393 | 346 | 48 | 3 | 1 | 342 | 1 | 344 | 0.0 | 600 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065792.t1 | AT5G03415 | 64.067 | 359 | 91 | 8 | 21 | 342 | 28 | 385 | 8.14e-148 | 422 |
| MS.gene065792.t1 | AT5G03415 | 62.117 | 359 | 92 | 9 | 21 | 342 | 28 | 379 | 1.06e-139 | 401 |
| MS.gene065792.t1 | AT5G02470 | 51.376 | 218 | 97 | 3 | 63 | 279 | 32 | 241 | 1.28e-75 | 235 |
| MS.gene065792.t1 | AT5G02470 | 51.376 | 218 | 97 | 3 | 63 | 279 | 32 | 241 | 1.28e-75 | 235 |
| MS.gene065792.t1 | AT5G02470 | 51.376 | 218 | 97 | 3 | 63 | 279 | 32 | 241 | 1.28e-75 | 235 |
Find 89 sgRNAs with CRISPR-Local
Find 273 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTCTCAAGGCAATGGATTT+TGG | 0.207282 | 4.4:-32818497 | MS.gene065792:CDS |
| TCCACTCCCTGGAATATTAA+AGG | 0.271571 | 4.4:-32818336 | MS.gene065792:CDS |
| GGTTGTGGAACTACGCTTTC+CGG | 0.284948 | 4.4:-32822134 | MS.gene065792:CDS |
| TATTATTGCTACAAGTTTGT+AGG | 0.286595 | 4.4:-32819488 | MS.gene065792:intron |
| ATTGTTCATTTCGTTGAATA+AGG | 0.299922 | 4.4:+32819456 | None:intergenic |
| TATACCTGAACCAGAATAAA+AGG | 0.312486 | 4.4:+32819392 | None:intergenic |
| ACTCTTGCCTTTAATATTCC+AGG | 0.333887 | 4.4:+32818329 | None:intergenic |
| TGATGCTCTGAATGTTCTTA+TGG | 0.333958 | 4.4:-32819907 | MS.gene065792:CDS |
| AACCTTTCATACTAAATTGC+CGG | 0.339281 | 4.4:+32821134 | None:intergenic |
| TGGTGGTTTGTCCCCTGATC+AGG | 0.346346 | 4.4:-32820073 | MS.gene065792:intron |
| CAGTTTCAAACATGTTAGTT+AGG | 0.354238 | 4.4:-32818373 | MS.gene065792:CDS |
| TCCTGCTGGTTGAGCCTGAT+TGG | 0.355296 | 4.4:+32822111 | None:intergenic |
| GAAGATAAGAAAACCTGATC+AGG | 0.380867 | 4.4:+32820060 | None:intergenic |
| CGAAGAGGACGAGGAATTGA+TGG | 0.402627 | 4.4:-32822156 | MS.gene065792:CDS |
| ACTACGCTTTCCGGCCAATC+AGG | 0.405110 | 4.4:-32822125 | MS.gene065792:CDS |
| GGCTCAACCAGCAGGAGTGC+CGG | 0.417822 | 4.4:-32822104 | MS.gene065792:CDS |
| TTAAATAGACACAGCGTCTT+GGG | 0.420475 | 4.4:-32819706 | MS.gene065792:intron |
| GCCTTTAATATTCCAGGGAG+TGG | 0.432840 | 4.4:+32818335 | None:intergenic |
| AGACACAGCGTCTTGGGCTT+AGG | 0.448668 | 4.4:-32819700 | MS.gene065792:CDS |
| TCCTCATGCAACTGTGGAAG+TGG | 0.457569 | 4.4:-32818866 | MS.gene065792:CDS |
| ATTAAATAGACACAGCGTCT+TGG | 0.463317 | 4.4:-32819707 | MS.gene065792:intron |
| GGGGAAGGTTCTAGCATGTC+AGG | 0.468504 | 4.4:-32818422 | MS.gene065792:CDS |
| AGACTCACGCAACTACTGCC+TGG | 0.468595 | 4.4:+32821979 | None:intergenic |
| GCCAATCAGGCTCAACCAGC+AGG | 0.469228 | 4.4:-32822112 | MS.gene065792:CDS |
| GACGAGGAATTGATGGGTTG+TGG | 0.469944 | 4.4:-32822149 | MS.gene065792:CDS |
| GGCTATGAATATTATTTCCA+AGG | 0.477616 | 4.4:-32819886 | MS.gene065792:CDS |
| AGGTAAAGATACACCTCCAC+TGG | 0.479385 | 4.4:+32819412 | None:intergenic |
| CTGCTCAAGCTCCTGCAGAT+AGG | 0.480130 | 4.4:+32819655 | None:intergenic |
| GCTCAACCAGCAGGAGTGCC+GGG | 0.480925 | 4.4:-32822103 | MS.gene065792:CDS |
| GAGTGATATTGAAGAACTAA+AGG | 0.483152 | 4.4:-32819820 | MS.gene065792:intron |
| CTCCGGCAATTTAGTATGAA+AGG | 0.485877 | 4.4:-32821136 | MS.gene065792:intron |
| CGGTAACCCGGCACTCCTGC+TGG | 0.489023 | 4.4:+32822097 | None:intergenic |
| GCTGGTTGAGCCTGATTGGC+CGG | 0.493558 | 4.4:+32822115 | None:intergenic |
| AATGAACAATTATATAGCTC+AGG | 0.501710 | 4.4:-32819443 | MS.gene065792:CDS |
| AGCCGGAGTGAGCAGACCAC+GGG | 0.509849 | 4.4:-32822071 | MS.gene065792:CDS |
| GGGGACAAACCACCATTGCT+TGG | 0.511216 | 4.4:+32820081 | None:intergenic |
| GACTCACGCAACTACTGCCT+GGG | 0.512394 | 4.4:+32821980 | None:intergenic |
| ATAAGAATGGAAGAGGGCTC+CGG | 0.512718 | 4.4:-32821153 | MS.gene065792:CDS |
| GTCCGTGGACGAAGAGGACG+AGG | 0.514783 | 4.4:-32822165 | MS.gene065792:CDS |
| CTCTTGCCTTTAATATTCCA+GGG | 0.515553 | 4.4:+32818330 | None:intergenic |
| TGTGAGAAGGTAGAAAGTAA+AGG | 0.516897 | 4.4:-32820623 | MS.gene065792:CDS |
| TGATGACGATGCTGCTTCCC+AGG | 0.519370 | 4.4:-32821997 | MS.gene065792:CDS |
| CAATTATGTTCTCAAGGCAA+TGG | 0.525211 | 4.4:-32818504 | MS.gene065792:CDS |
| CCGACATCACCTCCACTCCC+TGG | 0.527073 | 4.4:-32818347 | MS.gene065792:CDS |
| TTCCTCGTCCTCTTCGTCCA+CGG | 0.529381 | 4.4:+32822163 | None:intergenic |
| GTCAGGCATGTATCAATCAC+AGG | 0.555543 | 4.4:-32818405 | MS.gene065792:CDS |
| TTGTCGTCATGCAGCTCGAA+AGG | 0.559999 | 4.4:+32818524 | None:intergenic |
| AAGATAAGAAAACCTGATCA+GGG | 0.563158 | 4.4:+32820061 | None:intergenic |
| CACACAATATTGCGGATGGA+GGG | 0.564114 | 4.4:-32818442 | MS.gene065792:CDS |
| GGCTTAGGAGTAGAATTGAA+AGG | 0.565800 | 4.4:-32819685 | MS.gene065792:CDS |
| TTTAATATTCCAGGGAGTGG+AGG | 0.566833 | 4.4:+32818338 | None:intergenic |
| GTCTGCTCACTCCGGCTAGA+CGG | 0.569869 | 4.4:+32822077 | None:intergenic |
| TTTGAGAGCAGCGTTATCAC+CGG | 0.570401 | 4.4:+32822040 | None:intergenic |
| CAGACCACGGGGACAGCCGC+CGG | 0.573222 | 4.4:-32822059 | MS.gene065792:CDS |
| GTGCCGGGTTACCGTCTAGC+CGG | 0.573556 | 4.4:-32822088 | MS.gene065792:CDS |
| AAGGAAAGCAGCCTATCTGC+AGG | 0.574961 | 4.4:-32819666 | MS.gene065792:CDS |
| AATATTGCGGATGGAGGGGA+AGG | 0.575401 | 4.4:-32818437 | MS.gene065792:CDS |
| TTCTTCAATATCACTCAGAC+TGG | 0.575701 | 4.4:+32819827 | None:intergenic |
| CCAGGGAGTGGAGGTGATGT+CGG | 0.580031 | 4.4:+32818347 | None:intergenic |
| ACACAATATTGCGGATGGAG+GGG | 0.585147 | 4.4:-32818441 | MS.gene065792:CDS |
| TCCCCGTGGTCTGCTCACTC+CGG | 0.599110 | 4.4:+32822069 | None:intergenic |
| ACACACAATATTGCGGATGG+AGG | 0.602906 | 4.4:-32818443 | MS.gene065792:CDS |
| GAAGAGGACGAGGAATTGAT+GGG | 0.603441 | 4.4:-32822155 | MS.gene065792:CDS |
| TGACGACAATTATGTTCTCA+AGG | 0.607641 | 4.4:-32818510 | MS.gene065792:CDS |
| TCCACTTCCACAGTTGCATG+AGG | 0.608745 | 4.4:+32818865 | None:intergenic |
| GTTACACACAATATTGCGGA+TGG | 0.615879 | 4.4:-32818446 | MS.gene065792:CDS |
| GGGAGTGGAGGTGATGTCGG+AGG | 0.628434 | 4.4:+32818350 | None:intergenic |
| TCAATCGTCCGTGGACGAAG+AGG | 0.631369 | 4.4:-32822171 | MS.gene065792:CDS |
| CAATGTTACACACAATATTG+CGG | 0.641067 | 4.4:-32818450 | MS.gene065792:CDS |
| TCAGGAAATCCTCCCAGTGG+AGG | 0.644133 | 4.4:-32819425 | MS.gene065792:CDS |
| GACACGTCCTCATGCAACTG+TGG | 0.649899 | 4.4:-32818872 | MS.gene065792:CDS |
| TAGCCGGAGTGAGCAGACCA+CGG | 0.651050 | 4.4:-32822072 | MS.gene065792:CDS |
| TGTGTAACATTGTCACTCTG+TGG | 0.651492 | 4.4:+32818461 | None:intergenic |
| ATCACCGGCGGCTGTCCCCG+TGG | 0.656058 | 4.4:+32822055 | None:intergenic |
| ACTCCGGCTAGACGGTAACC+CGG | 0.657214 | 4.4:+32822085 | None:intergenic |
| AGGAAGAACAACTTACAATG+AGG | 0.663086 | 4.4:-32820603 | MS.gene065792:intron |
| GAGCATCATAGACCCTTCGA+CGG | 0.678223 | 4.4:+32819922 | None:intergenic |
| GGTAAAGATACACCTCCACT+GGG | 0.679973 | 4.4:+32819413 | None:intergenic |
| AGCTCAGGAAATCCTCCCAG+TGG | 0.682103 | 4.4:-32819428 | MS.gene065792:CDS |
| GCAGCCGCATCAATCGTCCG+TGG | 0.683605 | 4.4:-32822180 | MS.gene065792:CDS |
| AGATAAGAAAACCTGATCAG+GGG | 0.686331 | 4.4:+32820062 | None:intergenic |
| ATAGGTGGCAGATGAACTTG+TGG | 0.689893 | 4.4:-32820118 | MS.gene065792:intron |
| AACATGTTTGAAACTGACTG+AGG | 0.695881 | 4.4:+32818380 | None:intergenic |
| TCGTCCACGGACGATTGATG+CGG | 0.696336 | 4.4:+32822176 | None:intergenic |
| GAGAGCAGCGTTATCACCGG+CGG | 0.697043 | 4.4:+32822043 | None:intergenic |
| GGGGTGATAAGAATGGAAGA+GGG | 0.716134 | 4.4:-32821159 | MS.gene065792:CDS |
| AAAGATACACCTCCACTGGG+AGG | 0.724160 | 4.4:+32819416 | None:intergenic |
| ATATCACTCAGACTGGTACG+AGG | 0.734989 | 4.4:+32819834 | None:intergenic |
| GCCGGAGTGAGCAGACCACG+GGG | 0.739516 | 4.4:-32822070 | MS.gene065792:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAAAAAATTTTTTTTTTT+AGG | + | chr4.4:32820368-32820349 | None:intergenic | 0.0% |
| !!! | TTTTTTTTTTTTTTAAATAT+AGG | - | chr4.4:32820365-32820384 | MS.gene065792:intron | 0.0% |
| !! | AAGTATAGATATAAATAAAA+AGG | + | chr4.4:32819201-32819220 | None:intergenic | 10.0% |
| !!! | ATTTTTTTTTTTAGGAAATA+AGG | + | chr4.4:32820339-32820358 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTTAAATATAGG+TGG | - | chr4.4:32820368-32820387 | MS.gene065792:intron | 10.0% |
| !! | AAATTAATTAGTGGTTAATT+TGG | - | chr4.4:32819058-32819077 | MS.gene065792:intron | 15.0% |
| !! | CTATTTAAAAAACTAATTGA+AGG | + | chr4.4:32820149-32820168 | None:intergenic | 15.0% |
| !! | TTATTTATATCTATACTTTG+TGG | - | chr4.4:32819203-32819222 | MS.gene065792:intron | 15.0% |
| !!! | AAATAATTTTCCCTTTTTTT+GGG | - | chr4.4:32821348-32821367 | MS.gene065792:intron | 15.0% |
| !!! | ATCTTATGAACTTATTTTTT+TGG | - | chr4.4:32820514-32820533 | MS.gene065792:intron | 15.0% |
| !!! | CTTCAATTAGTTTTTTAAAT+AGG | - | chr4.4:32820147-32820166 | MS.gene065792:intron | 15.0% |
| !!! | TCTTATGAACTTATTTTTTT+GGG | - | chr4.4:32820515-32820534 | MS.gene065792:intron | 15.0% |
| !! | AAAAAAGAAATACAATGGAA+GGG | - | chr4.4:32820640-32820659 | MS.gene065792:intron | 20.0% |
| !! | AATTAACCACTAATTAATTC+AGG | + | chr4.4:32818957-32818976 | None:intergenic | 20.0% |
| !! | AATTTAAAAAATAGCAATCC+AGG | + | chr4.4:32820918-32820937 | None:intergenic | 20.0% |
| !! | AGGATAAAAAAGAAATACAA+TGG | - | chr4.4:32820635-32820654 | MS.gene065792:intron | 20.0% |
| !! | ATGTAATATATTATCATCCA+AGG | + | chr4.4:32821198-32821217 | None:intergenic | 20.0% |
| !! | GAATTAATTAGTGGTTAATT+TGG | - | chr4.4:32818957-32818976 | MS.gene065792:intron | 20.0% |
| !! | TAAAAAAGAAATACAATGGA+AGG | - | chr4.4:32820639-32820658 | MS.gene065792:intron | 20.0% |
| !! | TAAAAAGTTAAAGATCAAAG+TGG | + | chr4.4:32819412-32819431 | None:intergenic | 20.0% |
| !! | TAAGAATCAATCGAAAATAA+TGG | + | chr4.4:32819273-32819292 | None:intergenic | 20.0% |
| !! | TATAAATCCAATTTCATGTT+TGG | - | chr4.4:32818610-32818629 | MS.gene065792:intron | 20.0% |
| !! | TTAAAACCTGAATTAATTAG+TGG | - | chr4.4:32818948-32818967 | MS.gene065792:intron | 20.0% |
| !! | TTCATTGCAAAATTAATTAG+TGG | - | chr4.4:32819049-32819068 | MS.gene065792:intron | 20.0% |
| !! | TTCTATAAATACATACATGT+TGG | - | chr4.4:32820071-32820090 | MS.gene065792:intron | 20.0% |
| !! | TTTATTCAAGGTCTAAAAAA+TGG | - | chr4.4:32818792-32818811 | MS.gene065792:intron | 20.0% |
| !!! | AAAAAACTGGTTTAAAGTAA+AGG | + | chr4.4:32819929-32819948 | None:intergenic | 20.0% |
| !!! | AAGATTTTCAATTAGTGAAA+AGG | - | chr4.4:32818717-32818736 | MS.gene065792:intron | 20.0% |
| !!! | CTTATGAACTTATTTTTTTG+GGG | - | chr4.4:32820516-32820535 | MS.gene065792:intron | 20.0% |
| !!! | GAAATAATTTTCCCTTTTTT+TGG | - | chr4.4:32821347-32821366 | MS.gene065792:intron | 20.0% |
| !!! | TATTTGCTATTTACACATTA+AGG | - | chr4.4:32820481-32820500 | MS.gene065792:intron | 20.0% |
| !!! | TTGTATTTCTTTTTTATCCT+TGG | + | chr4.4:32820635-32820654 | None:intergenic | 20.0% |
| !!! | TTGTTCATTTTGATTTCAAT+AGG | - | chr4.4:32821679-32821698 | MS.gene065792:intron | 20.0% |
| ! | AAATCAACAGTAAATTAGAG+AGG | + | chr4.4:32819849-32819868 | None:intergenic | 25.0% |
| ! | AATAAAAACAGAGAATTGAC+AGG | + | chr4.4:32819239-32819258 | None:intergenic | 25.0% |
| ! | AATCAACAGTAAATTAGAGA+GGG | + | chr4.4:32819848-32819867 | None:intergenic | 25.0% |
| ! | AATGAACAATTATATAGCTC+AGG | - | chr4.4:32821058-32821077 | MS.gene065792:intron | 25.0% |
| ! | AATTGAACAACAATTTCTAC+TGG | + | chr4.4:32821172-32821191 | None:intergenic | 25.0% |
| ! | AGAGAGTAAACATAAATAAG+TGG | + | chr4.4:32821947-32821966 | None:intergenic | 25.0% |
| ! | ATAACATAGACCCATAAAAT+AGG | + | chr4.4:32821465-32821484 | None:intergenic | 25.0% |
| ! | ATATTGAAGAACTAAAGGTT+TGG | - | chr4.4:32820686-32820705 | MS.gene065792:intron | 25.0% |
| ! | ATTACATGAACTTAAGTAGT+TGG | - | chr4.4:32821242-32821261 | MS.gene065792:intron | 25.0% |
| ! | ATTGTTCATTTCGTTGAATA+AGG | + | chr4.4:32821048-32821067 | None:intergenic | 25.0% |
| ! | CTTTATGATACCACAAAATT+AGG | + | chr4.4:32821790-32821809 | None:intergenic | 25.0% |
| ! | GATAAATCACAACATGAAAT+GGG | + | chr4.4:32820272-32820291 | None:intergenic | 25.0% |
| ! | GGTATTAAATCAATTAGAGT+GGG | + | chr4.4:32820885-32820904 | None:intergenic | 25.0% |
| ! | GTAGAGAAAATTGTCAAAAA+TGG | + | chr4.4:32819809-32819828 | None:intergenic | 25.0% |
| ! | TAAACATTTGTGTAAAGGTT+TGG | - | chr4.4:32819503-32819522 | MS.gene065792:intron | 25.0% |
| ! | TAGTATATAGCAGTAACTTT+CGG | + | chr4.4:32821395-32821414 | None:intergenic | 25.0% |
| ! | TATTATTGCTACAAGTTTGT+AGG | - | chr4.4:32821013-32821032 | MS.gene065792:intron | 25.0% |
| ! | TGAAAAGGAAAATGATATAC+TGG | - | chr4.4:32818732-32818751 | MS.gene065792:intron | 25.0% |
| ! | TGACATAAACATTTGTGTAA+AGG | - | chr4.4:32819498-32819517 | MS.gene065792:intron | 25.0% |
| ! | TGATAAATCACAACATGAAA+TGG | + | chr4.4:32820273-32820292 | None:intergenic | 25.0% |
| !! | ATTTTATGGGTCTATGTTAT+GGG | - | chr4.4:32821465-32821484 | MS.gene065792:intron | 25.0% |
| !! | CAAATAAGTTGTTTCAAACA+AGG | + | chr4.4:32819472-32819491 | None:intergenic | 25.0% |
| !! | CACTCTAATTGATTTAATAC+CGG | - | chr4.4:32820884-32820903 | MS.gene065792:intron | 25.0% |
| !! | TATTTTATGGGTCTATGTTA+TGG | - | chr4.4:32821464-32821483 | MS.gene065792:intron | 25.0% |
| !! | TGTATCTTTACCTTTTATTC+TGG | - | chr4.4:32821099-32821118 | MS.gene065792:intron | 25.0% |
| !!! | AATAAAAAGGTTTTGAATCG+TGG | + | chr4.4:32819188-32819207 | None:intergenic | 25.0% |
| !!! | AGACTTTATATTTTAGAACG+TGG | + | chr4.4:32820029-32820048 | None:intergenic | 25.0% |
| !!! | ATGCGTTCAATTTTGATTTA+GGG | - | chr4.4:32818682-32818701 | MS.gene065792:intron | 25.0% |
| !!! | ATTTTCAAGTAGATAAGTCT+TGG | - | chr4.4:32821868-32821887 | MS.gene065792:intron | 25.0% |
| !!! | GACAGAGATTTATTTTATTC+AGG | - | chr4.4:32819783-32819802 | MS.gene065792:intron | 25.0% |
| !!! | TGACAATTTTCTCTACTTTT+TGG | - | chr4.4:32819813-32819832 | MS.gene065792:intron | 25.0% |
| !!! | TTTTCAAGTAGATAAGTCTT+GGG | - | chr4.4:32821869-32821888 | MS.gene065792:intron | 25.0% |
| AACATAGTGAACAAACGTTA+TGG | - | chr4.4:32818845-32818864 | MS.gene065792:CDS | 30.0% | |
| AACCTTTCATACTAAATTGC+CGG | + | chr4.4:32819370-32819389 | None:intergenic | 30.0% | |
| AAGATAAGAAAACCTGATCA+GGG | + | chr4.4:32820443-32820462 | None:intergenic | 30.0% | |
| AATCAAATATCAGCACCAAT+AGG | + | chr4.4:32821585-32821604 | None:intergenic | 30.0% | |
| AGCTAAACCAAACATGAAAT+TGG | + | chr4.4:32818620-32818639 | None:intergenic | 30.0% | |
| AGGAAGTCTAAACATTAAGA+CGG | + | chr4.4:32821770-32821789 | None:intergenic | 30.0% | |
| AGTTACTGCTATATACTAGA+TGG | - | chr4.4:32821397-32821416 | MS.gene065792:intron | 30.0% | |
| ATCAACAGTAAATTAGAGAG+GGG | + | chr4.4:32819847-32819866 | None:intergenic | 30.0% | |
| CAAACAAATGCCCAAAAAAA+GGG | + | chr4.4:32821361-32821380 | None:intergenic | 30.0% | |
| CAATGTTACACACAATATTG+CGG | - | chr4.4:32822051-32822070 | MS.gene065792:CDS | 30.0% | |
| CAGTTTCAAACATGTTAGTT+AGG | - | chr4.4:32822128-32822147 | MS.gene065792:CDS | 30.0% | |
| CCTTGAATAAAATGTACCAT+TGG | + | chr4.4:32818783-32818802 | None:intergenic | 30.0% | |
| CGGTATTAAATCAATTAGAG+TGG | + | chr4.4:32820886-32820905 | None:intergenic | 30.0% | |
| GAGTGATATTGAAGAACTAA+AGG | - | chr4.4:32820681-32820700 | MS.gene065792:intron | 30.0% | |
| GGCTATGAATATTATTTCCA+AGG | - | chr4.4:32820615-32820634 | MS.gene065792:CDS | 30.0% | |
| GTCTATGTTATGGGTTTATA+CGG | - | chr4.4:32821474-32821493 | MS.gene065792:intron | 30.0% | |
| TATACCTGAACCAGAATAAA+AGG | + | chr4.4:32821112-32821131 | None:intergenic | 30.0% | |
| TCTAAAAAATGGTCCGTTAT+AGG | - | chr4.4:32818803-32818822 | MS.gene065792:intron | 30.0% | |
| TTGTTCTATACCAATTACCA+TGG | + | chr4.4:32818877-32818896 | None:intergenic | 30.0% | |
| ! | ATTGTTGTTCAATTATGCCT+TGG | - | chr4.4:32821178-32821197 | MS.gene065792:CDS | 30.0% |
| ! | ATTTCATGTTTGGTTTAGCT+TGG | - | chr4.4:32818620-32818639 | MS.gene065792:intron | 30.0% |
| ! | CAGATAAATTTTCCAACACA+GGG | + | chr4.4:32821924-32821943 | None:intergenic | 30.0% |
| ! | CCAATGGTACATTTTATTCA+AGG | - | chr4.4:32818780-32818799 | MS.gene065792:intron | 30.0% |
| ! | CTTTTAACGTGGTAAAAAAC+TGG | + | chr4.4:32819942-32819961 | None:intergenic | 30.0% |
| ! | GCAATGAATTTTTCATAGAC+TGG | + | chr4.4:32819037-32819056 | None:intergenic | 30.0% |
| ! | GTTTAGACTTCCTAATTTTG+TGG | - | chr4.4:32821777-32821796 | MS.gene065792:intron | 30.0% |
| ! | GTTTTGTCAATGATTAAGCA+CGG | - | chr4.4:32820169-32820188 | MS.gene065792:intron | 30.0% |
| ! | TAATTATTAGCCTCAGAAAC+TGG | - | chr4.4:32820220-32820239 | MS.gene065792:intron | 30.0% |
| ! | TTTCATGTTTGGTTTAGCTT+GGG | - | chr4.4:32818621-32818640 | MS.gene065792:intron | 30.0% |
| !! | GTTATGATGTGATTAGCTTT+AGG | - | chr4.4:32821736-32821755 | MS.gene065792:intron | 30.0% |
| !!! | CAATTTTCTCTACTTTTTGG+TGG | - | chr4.4:32819816-32819835 | MS.gene065792:intron | 30.0% |
| !!! | CATGCGTTCAATTTTGATTT+AGG | - | chr4.4:32818681-32818700 | MS.gene065792:intron | 30.0% |
| !!! | TTTACCTTTTATTCTGGTTC+AGG | - | chr4.4:32821105-32821124 | MS.gene065792:intron | 30.0% |
| AACTCAGATAATGACAAGCA+AGG | + | chr4.4:32821719-32821738 | None:intergenic | 35.0% | |
| AATCACAACATGAAATGGGT+AGG | + | chr4.4:32820268-32820287 | None:intergenic | 35.0% | |
| ACTCTTGCCTTTAATATTCC+AGG | + | chr4.4:32822175-32822194 | None:intergenic | 35.0% | |
| AGAGTTTATGCATAAGCTCT+TGG | - | chr4.4:32819634-32819653 | MS.gene065792:intron | 35.0% | |
| AGATAAGAAAACCTGATCAG+GGG | + | chr4.4:32820442-32820461 | None:intergenic | 35.0% | |
| AGGAAGAACAACTTACAATG+AGG | - | chr4.4:32819898-32819917 | MS.gene065792:CDS | 35.0% | |
| ATGAACTTAAGTAGTTGGCT+TGG | - | chr4.4:32821247-32821266 | MS.gene065792:intron | 35.0% | |
| ATTAAATAGACACAGCGTCT+TGG | - | chr4.4:32820794-32820813 | MS.gene065792:intron | 35.0% | |
| ATTGGAAGTAATGTATAGCC+AGG | + | chr4.4:32818765-32818784 | None:intergenic | 35.0% | |
| CAATTATGTTCTCAAGGCAA+TGG | - | chr4.4:32821997-32822016 | MS.gene065792:CDS | 35.0% | |
| CCAAACAAATGCCCAAAAAA+AGG | + | chr4.4:32821362-32821381 | None:intergenic | 35.0% | |
| CGCTAAGAATTTCATGACTT+TGG | + | chr4.4:32819162-32819181 | None:intergenic | 35.0% | |
| CGCTATAGCATTTATTGAGT+TGG | + | chr4.4:32820000-32820019 | None:intergenic | 35.0% | |
| CTCAATCATGGATAGCAAAT+CGG | - | chr4.4:32819969-32819988 | MS.gene065792:intron | 35.0% | |
| CTCTTGCCTTTAATATTCCA+GGG | + | chr4.4:32822174-32822193 | None:intergenic | 35.0% | |
| CTGGACAAAATGACCAAAAA+AGG | + | chr4.4:32821153-32821172 | None:intergenic | 35.0% | |
| GAAAATAGATCTTATCCAGC+TGG | - | chr4.4:32821309-32821328 | MS.gene065792:intron | 35.0% | |
| GAAACTAGTGTATCCTATTG+TGG | - | chr4.4:32821821-32821840 | MS.gene065792:intron | 35.0% | |
| GAACAACTTACAATGAGGTT+AGG | - | chr4.4:32819903-32819922 | MS.gene065792:CDS | 35.0% | |
| GAAGATAAGAAAACCTGATC+AGG | + | chr4.4:32820444-32820463 | None:intergenic | 35.0% | |
| GAATAATATGCTCATCCTGT+TGG | - | chr4.4:32821543-32821562 | MS.gene065792:intron | 35.0% | |
| GTACTGCATAAACATTGAGT+GGG | + | chr4.4:32819296-32819315 | None:intergenic | 35.0% | |
| GTATCAGACACTACCTATAA+CGG | + | chr4.4:32818819-32818838 | None:intergenic | 35.0% | |
| GTTATAGGTAGTGTCTGATA+CGG | - | chr4.4:32818818-32818837 | MS.gene065792:intron | 35.0% | |
| TAGTTAATTCACTAACCAGC+TGG | + | chr4.4:32821327-32821346 | None:intergenic | 35.0% | |
| TGACGACAATTATGTTCTCA+AGG | - | chr4.4:32821991-32822010 | MS.gene065792:CDS | 35.0% | |
| TGGCTATACATTACTTCCAA+TGG | - | chr4.4:32818764-32818783 | MS.gene065792:intron | 35.0% | |
| TGTGAGAAGGTAGAAAGTAA+AGG | - | chr4.4:32819878-32819897 | MS.gene065792:CDS | 35.0% | |
| TTAAATAGACACAGCGTCTT+GGG | - | chr4.4:32820795-32820814 | MS.gene065792:intron | 35.0% | |
| TTAAATCAATTAGAGTGGGC+TGG | + | chr4.4:32820881-32820900 | None:intergenic | 35.0% | |
| TTAGATCAGAACATCACTGA+AGG | + | chr4.4:32820756-32820775 | None:intergenic | 35.0% | |
| TTCTTCAATATCACTCAGAC+TGG | + | chr4.4:32820677-32820696 | None:intergenic | 35.0% | |
| TTTCATGACTTTGGCTGTTA+CGG | + | chr4.4:32819153-32819172 | None:intergenic | 35.0% | |
| ! | AAAAGCACAGTTCTCAATCA+TGG | - | chr4.4:32819957-32819976 | MS.gene065792:intron | 35.0% |
| ! | AACATGTTTGAAACTGACTG+AGG | + | chr4.4:32822124-32822143 | None:intergenic | 35.0% |
| ! | AATCTAGAAAGTGCAGAGAT+TGG | + | chr4.4:32818551-32818570 | None:intergenic | 35.0% |
| ! | ACTCTGGTTGCCTATTTTAT+GGG | - | chr4.4:32821452-32821471 | MS.gene065792:intron | 35.0% |
| ! | ATACACTAGTTTCCACTTTC+CGG | + | chr4.4:32821814-32821833 | None:intergenic | 35.0% |
| ! | GAATTTTCTGATCCAAGCAA+TGG | - | chr4.4:32820408-32820427 | MS.gene065792:intron | 35.0% |
| ! | GCAGATAAATTTTCCAACAC+AGG | + | chr4.4:32821925-32821944 | None:intergenic | 35.0% |
| ! | TACTCTGGTTGCCTATTTTA+TGG | - | chr4.4:32821451-32821470 | MS.gene065792:intron | 35.0% |
| ! | TCTGAGGCTAATAATTACCA+CGG | + | chr4.4:32820217-32820236 | None:intergenic | 35.0% |
| ! | TGATGCTCTGAATGTTCTTA+TGG | - | chr4.4:32820594-32820613 | MS.gene065792:intron | 35.0% |
| ! | TTGTTTAGTTCAGCTTACTC+TGG | - | chr4.4:32821436-32821455 | MS.gene065792:intron | 35.0% |
| ! | TTTTGTGGTATCATAAAGCC+CGG | - | chr4.4:32821792-32821811 | MS.gene065792:intron | 35.0% |
| !!! | ATCTCAGTATCTGCCTTTTT+TGG | - | chr4.4:32821137-32821156 | MS.gene065792:CDS | 35.0% |
| !!! | ATTAAGCACGGTGGTTTTTT+GGG | - | chr4.4:32820181-32820200 | MS.gene065792:intron | 35.0% |
| !!! | CCTTTTTTTGGGCATTTGTT+TGG | - | chr4.4:32821359-32821378 | MS.gene065792:intron | 35.0% |
| AAAGGCAGATACTGAGATGA+TGG | + | chr4.4:32821135-32821154 | None:intergenic | 40.0% | |
| AATTGTGAAACTTGCAGCAG+TGG | - | chr4.4:32819745-32819764 | MS.gene065792:intron | 40.0% | |
| ACTCAGCATTCAGCATACTA+AGG | + | chr4.4:32819714-32819733 | None:intergenic | 40.0% | |
| AGGATAAGTGCAACTTTGCA+AGG | + | chr4.4:32819452-32819471 | None:intergenic | 40.0% | |
| ATAAGTCTTGGGAGCTAGTT+AGG | - | chr4.4:32821880-32821899 | MS.gene065792:intron | 40.0% | |
| ATGAGAAAAACATCCGTCGA+AGG | - | chr4.4:32820566-32820585 | MS.gene065792:intron | 40.0% | |
| CTCAGCATTCAGCATACTAA+GGG | + | chr4.4:32819713-32819732 | None:intergenic | 40.0% | |
| CTCCGGCAATTTAGTATGAA+AGG | - | chr4.4:32819365-32819384 | MS.gene065792:intron | 40.0% | |
| GGCTTAGGAGTAGAATTGAA+AGG | - | chr4.4:32820816-32820835 | MS.gene065792:intron | 40.0% | |
| GGTACTGCATAAACATTGAG+TGG | + | chr4.4:32819297-32819316 | None:intergenic | 40.0% | |
| GTACCAAGAAGAAAAAGCGA+CGG | - | chr4.4:32819312-32819331 | MS.gene065792:intron | 40.0% | |
| GTGAACAAACGTTATGGAAG+CGG | - | chr4.4:32818851-32818870 | MS.gene065792:CDS | 40.0% | |
| GTTACACACAATATTGCGGA+TGG | - | chr4.4:32822055-32822074 | MS.gene065792:CDS | 40.0% | |
| TAAGTCTTGGGAGCTAGTTA+GGG | - | chr4.4:32821881-32821900 | MS.gene065792:intron | 40.0% | |
| TACCAAGAAGAAAAAGCGAC+GGG | - | chr4.4:32819313-32819332 | MS.gene065792:intron | 40.0% | |
| TCAGCATTCAGCATACTAAG+GGG | + | chr4.4:32819712-32819731 | None:intergenic | 40.0% | |
| TCCACTCCCTGGAATATTAA+AGG | - | chr4.4:32822165-32822184 | MS.gene065792:CDS | 40.0% | |
| TCCTATTGTGGTCAAACACT+CGG | - | chr4.4:32821833-32821852 | MS.gene065792:intron | 40.0% | |
| TGAGAAAAACATCCGTCGAA+GGG | - | chr4.4:32820567-32820586 | MS.gene065792:intron | 40.0% | |
| TGATATACTGGACTTGAACC+TGG | - | chr4.4:32818744-32818763 | MS.gene065792:intron | 40.0% | |
| TGCTTCGATAAGCTATTGTG+AGG | + | chr4.4:32819566-32819585 | None:intergenic | 40.0% | |
| TGTGTAACATTGTCACTCTG+TGG | + | chr4.4:32822043-32822062 | None:intergenic | 40.0% | |
| TTAATACCGGAATGCTAACC+TGG | - | chr4.4:32820897-32820916 | MS.gene065792:intron | 40.0% | |
| TTGTCAATGATTAAGCACGG+TGG | - | chr4.4:32820172-32820191 | MS.gene065792:intron | 40.0% | |
| TTTAATATTCCAGGGAGTGG+AGG | + | chr4.4:32822166-32822185 | None:intergenic | 40.0% | |
| ! | ATTTTCTGCAGTGTGTGAGA+AGG | - | chr4.4:32819865-32819884 | MS.gene065792:CDS | 40.0% |
| ! | TACACTAGTTTCCACTTTCC+GGG | + | chr4.4:32821813-32821832 | None:intergenic | 40.0% |
| ! | TGAGAACTGTGCTTTTAACG+TGG | + | chr4.4:32819953-32819972 | None:intergenic | 40.0% |
| ! | TTTTCTGATCCAAGCAATGG+TGG | - | chr4.4:32820411-32820430 | MS.gene065792:intron | 40.0% |
| !! | ACTTTCTAAGATCCATGACC+AGG | + | chr4.4:32821506-32821525 | None:intergenic | 40.0% |
| !! | GTTCTCAAGGCAATGGATTT+TGG | - | chr4.4:32822004-32822023 | MS.gene065792:CDS | 40.0% |
| !! | TCAAGGCAATGGATTTTGGT+GGG | - | chr4.4:32822008-32822027 | MS.gene065792:CDS | 40.0% |
| !! | TTTAGCTTGGGATGAGATTC+TGG | - | chr4.4:32818633-32818652 | MS.gene065792:intron | 40.0% |
| !!! | GATTAAGCACGGTGGTTTTT+TGG | - | chr4.4:32820180-32820199 | MS.gene065792:intron | 40.0% |
| AAGTCCACTACCAGTTTCTG+AGG | + | chr4.4:32820233-32820252 | None:intergenic | 45.0% | |
| ACAACATGAAATGGGTAGGC+AGG | + | chr4.4:32820264-32820283 | None:intergenic | 45.0% | |
| ACACAATATTGCGGATGGAG+GGG | - | chr4.4:32822060-32822079 | MS.gene065792:CDS | 45.0% | |
| ACACACAATATTGCGGATGG+AGG | - | chr4.4:32822058-32822077 | MS.gene065792:CDS | 45.0% | |
| AGCAATCCAGGTTAGCATTC+CGG | + | chr4.4:32820906-32820925 | None:intergenic | 45.0% | |
| AGGTAAAGATACACCTCCAC+TGG | + | chr4.4:32821092-32821111 | None:intergenic | 45.0% | |
| ATAAGAATGGAAGAGGGCTC+CGG | - | chr4.4:32819348-32819367 | MS.gene065792:intron | 45.0% | |
| ATACGGAGAATTCCTGGTCA+TGG | - | chr4.4:32821491-32821510 | MS.gene065792:intron | 45.0% | |
| ATAGGTGGCAGATGAACTTG+TGG | - | chr4.4:32820383-32820402 | MS.gene065792:intron | 45.0% | |
| ATATCACTCAGACTGGTACG+AGG | + | chr4.4:32820670-32820689 | None:intergenic | 45.0% | |
| CACACAATATTGCGGATGGA+GGG | - | chr4.4:32822059-32822078 | MS.gene065792:CDS | 45.0% | |
| CTGTTACGGATGTTGCGTTA+TGG | + | chr4.4:32819139-32819158 | None:intergenic | 45.0% | |
| GAAGAGGACGAGGAATTGAT+GGG | - | chr4.4:32818346-32818365 | MS.gene065792:CDS | 45.0% | |
| GCCTTTAATATTCCAGGGAG+TGG | + | chr4.4:32822169-32822188 | None:intergenic | 45.0% | |
| GGGGTGATAAGAATGGAAGA+GGG | - | chr4.4:32819342-32819361 | MS.gene065792:intron | 45.0% | |
| GGGTTTATACGGAGAATTCC+TGG | - | chr4.4:32821485-32821504 | MS.gene065792:intron | 45.0% | |
| GGTAAAGATACACCTCCACT+GGG | + | chr4.4:32821091-32821110 | None:intergenic | 45.0% | |
| GTATCATAAAGCCCGGAAAG+TGG | - | chr4.4:32821799-32821818 | MS.gene065792:intron | 45.0% | |
| GTCAGGCATGTATCAATCAC+AGG | - | chr4.4:32822096-32822115 | MS.gene065792:CDS | 45.0% | |
| TCCGAGTGTTTGACCACAAT+AGG | + | chr4.4:32821837-32821856 | None:intergenic | 45.0% | |
| TTAGCCTCAGAAACTGGTAG+TGG | - | chr4.4:32820226-32820245 | MS.gene065792:intron | 45.0% | |
| TTTGAGAGCAGCGTTATCAC+CGG | + | chr4.4:32818464-32818483 | None:intergenic | 45.0% | |
| ! | CTGTATCTTTTCTCTCTGCG+TGG | - | chr4.4:32820719-32820738 | MS.gene065792:intron | 45.0% |
| ! | GGATGTTGCGTTATGGATTG+TGG | + | chr4.4:32819132-32819151 | None:intergenic | 45.0% |
| ! | GTTATGGATTGTGGTCGTTG+CGG | + | chr4.4:32819123-32819142 | None:intergenic | 45.0% |
| !! | AAGGCAATGGATTTTGGTGG+GGG | - | chr4.4:32822010-32822029 | MS.gene065792:CDS | 45.0% |
| !! | CAAGGCAATGGATTTTGGTG+GGG | - | chr4.4:32822009-32822028 | MS.gene065792:CDS | 45.0% |
| !! | CTCAAGGCAATGGATTTTGG+TGG | - | chr4.4:32822007-32822026 | MS.gene065792:CDS | 45.0% |
| !!! | TTTTGGGATCAAGTTGTCCG+TGG | - | chr4.4:32820197-32820216 | MS.gene065792:intron | 45.0% |
| !! | AAAAAAAAATATAAGTAATA+CGG | + | chr4.4:32820301-32820320 | None:intergenic | 5.0% |
| !!! | TTTAATCAAATTTATATTTT+TGG | + | chr4.4:32820780-32820799 | None:intergenic | 5.0% |
| AAACGTTATGGAAGCGGCCA+TGG | - | chr4.4:32818857-32818876 | MS.gene065792:CDS | 50.0% | |
| AAAGATACACCTCCACTGGG+AGG | + | chr4.4:32821088-32821107 | None:intergenic | 50.0% | |
| AAGGAAAGCAGCCTATCTGC+AGG | - | chr4.4:32820835-32820854 | MS.gene065792:intron | 50.0% | |
| AATATTGCGGATGGAGGGGA+AGG | - | chr4.4:32822064-32822083 | MS.gene065792:CDS | 50.0% | |
| ATGGAAGCGGCCATGGTAAT+TGG | - | chr4.4:32818864-32818883 | MS.gene065792:CDS | 50.0% | |
| CGAAGAGGACGAGGAATTGA+TGG | - | chr4.4:32818345-32818364 | MS.gene065792:CDS | 50.0% | |
| GAGCATCATAGACCCTTCGA+CGG | + | chr4.4:32820582-32820601 | None:intergenic | 50.0% | |
| GCTGTTGGGGGTGATAAGAA+TGG | - | chr4.4:32819335-32819354 | MS.gene065792:intron | 50.0% | |
| GGGGGTGATAAGAATGGAAG+AGG | - | chr4.4:32819341-32819360 | MS.gene065792:intron | 50.0% | |
| GGTTGTGGAACTACGCTTTC+CGG | - | chr4.4:32818367-32818386 | MS.gene065792:CDS | 50.0% | |
| TCCACTTCCACAGTTGCATG+AGG | + | chr4.4:32821639-32821658 | None:intergenic | 50.0% | |
| TCCTCATGCAACTGTGGAAG+TGG | - | chr4.4:32821635-32821654 | MS.gene065792:intron | 50.0% | |
| TGCTGTGATGTGGCTCCTAT+TGG | - | chr4.4:32821567-32821586 | MS.gene065792:intron | 50.0% | |
| TTGTCGTCATGCAGCTCGAA+AGG | + | chr4.4:32821980-32821999 | None:intergenic | 50.0% | |
| ! | TGGTGCTTTTGTCCCTGTGT+TGG | - | chr4.4:32821909-32821928 | MS.gene065792:intron | 50.0% |
| !! | AAGAAAAAGCGACGGGCTGT+TGG | - | chr4.4:32819320-32819339 | MS.gene065792:intron | 50.0% |
| !! | AGAAAAAGCGACGGGCTGTT+GGG | - | chr4.4:32819321-32819340 | MS.gene065792:intron | 50.0% |
| !! | GACGAGGAATTGATGGGTTG+TGG | - | chr4.4:32818352-32818371 | MS.gene065792:CDS | 50.0% |
| !!! | AGCCCGTCGCTTTTTCTTCT+TGG | + | chr4.4:32819318-32819337 | None:intergenic | 50.0% |
| ACTACGCTTTCCGGCCAATC+AGG | - | chr4.4:32818376-32818395 | MS.gene065792:CDS | 55.0% | |
| AGACACAGCGTCTTGGGCTT+AGG | - | chr4.4:32820801-32820820 | MS.gene065792:intron | 55.0% | |
| AGACTCACGCAACTACTGCC+TGG | + | chr4.4:32818525-32818544 | None:intergenic | 55.0% | |
| AGCTCAGGAAATCCTCCCAG+TGG | - | chr4.4:32821073-32821092 | MS.gene065792:intron | 55.0% | |
| CATGAAATGGGTAGGCAGGC+AGG | + | chr4.4:32820260-32820279 | None:intergenic | 55.0% | |
| CTGCTCAAGCTCCTGCAGAT+AGG | + | chr4.4:32820849-32820868 | None:intergenic | 55.0% | |
| GACACGTCCTCATGCAACTG+TGG | - | chr4.4:32821629-32821648 | MS.gene065792:intron | 55.0% | |
| GACTCACGCAACTACTGCCT+GGG | + | chr4.4:32818524-32818543 | None:intergenic | 55.0% | |
| GGGGACAAACCACCATTGCT+TGG | + | chr4.4:32820423-32820442 | None:intergenic | 55.0% | |
| GTCTTGGGAGCTAGTTAGGG+TGG | - | chr4.4:32821884-32821903 | MS.gene065792:intron | 55.0% | |
| TCAATCGTCCGTGGACGAAG+AGG | - | chr4.4:32818330-32818349 | MS.gene065792:CDS | 55.0% | |
| TCAGGAAATCCTCCCAGTGG+AGG | - | chr4.4:32821076-32821095 | MS.gene065792:intron | 55.0% | |
| TCGTCCACGGACGATTGATG+CGG | + | chr4.4:32818328-32818347 | None:intergenic | 55.0% | |
| TTCCTCGTCCTCTTCGTCCA+CGG | + | chr4.4:32818341-32818360 | None:intergenic | 55.0% | |
| ! | GGGGAAGGTTCTAGCATGTC+AGG | - | chr4.4:32822079-32822098 | MS.gene065792:CDS | 55.0% |
| ! | TCCTGCTGGTTGAGCCTGAT+TGG | + | chr4.4:32818393-32818412 | None:intergenic | 55.0% |
| ! | TCCTGTTGGCTGCTGTGATG+TGG | - | chr4.4:32821557-32821576 | MS.gene065792:intron | 55.0% |
| ! | TGATGACGATGCTGCTTCCC+AGG | - | chr4.4:32818504-32818523 | MS.gene065792:CDS | 55.0% |
| ! | TGGTGGTTTGTCCCCTGATC+AGG | - | chr4.4:32820428-32820447 | MS.gene065792:intron | 55.0% |
| !! | AAAAAGCGACGGGCTGTTGG+GGG | - | chr4.4:32819323-32819342 | MS.gene065792:intron | 55.0% |
| !! | GAAAAAGCGACGGGCTGTTG+GGG | - | chr4.4:32819322-32819341 | MS.gene065792:intron | 55.0% |
| ACTCCGGCTAGACGGTAACC+CGG | + | chr4.4:32818419-32818438 | None:intergenic | 60.0% | |
| CCAGGGAGTGGAGGTGATGT+CGG | + | chr4.4:32822157-32822176 | None:intergenic | 60.0% | |
| GAGAGCAGCGTTATCACCGG+CGG | + | chr4.4:32818461-32818480 | None:intergenic | 60.0% | |
| GCCAATCAGGCTCAACCAGC+AGG | - | chr4.4:32818389-32818408 | MS.gene065792:CDS | 60.0% | |
| GCCACATCACAGCAGCCAAC+AGG | + | chr4.4:32821561-32821580 | None:intergenic | 60.0% | |
| GCTGGTTGAGCCTGATTGGC+CGG | + | chr4.4:32818389-32818408 | None:intergenic | 60.0% | |
| GGGAGCTAGTTAGGGTGGTG+TGG | - | chr4.4:32821889-32821908 | MS.gene065792:intron | 60.0% | |
| GTCTGCTCACTCCGGCTAGA+CGG | + | chr4.4:32818427-32818446 | None:intergenic | 60.0% | |
| TAGCCGGAGTGAGCAGACCA+CGG | - | chr4.4:32818429-32818448 | MS.gene065792:CDS | 60.0% | |
| AGCCGGAGTGAGCAGACCAC+GGG | - | chr4.4:32818430-32818449 | MS.gene065792:CDS | 65.0% | |
| CCGACATCACCTCCACTCCC+TGG | - | chr4.4:32822154-32822173 | MS.gene065792:CDS | 65.0% | |
| GCAGCCGCATCAATCGTCCG+TGG | - | chr4.4:32818321-32818340 | MS.gene065792:CDS | 65.0% | |
| GGGAGTGGAGGTGATGTCGG+AGG | + | chr4.4:32822154-32822173 | None:intergenic | 65.0% | |
| GTCCGTGGACGAAGAGGACG+AGG | - | chr4.4:32818336-32818355 | MS.gene065792:CDS | 65.0% | |
| GTGCCGGGTTACCGTCTAGC+CGG | - | chr4.4:32818413-32818432 | MS.gene065792:CDS | 65.0% | |
| TCCCCGTGGTCTGCTCACTC+CGG | + | chr4.4:32818435-32818454 | None:intergenic | 65.0% | |
| ! | GGCTCAACCAGCAGGAGTGC+CGG | - | chr4.4:32818397-32818416 | MS.gene065792:CDS | 65.0% |
| !! | GCTCAACCAGCAGGAGTGCC+GGG | - | chr4.4:32818398-32818417 | MS.gene065792:CDS | 65.0% |
| CGGTAACCCGGCACTCCTGC+TGG | + | chr4.4:32818407-32818426 | None:intergenic | 70.0% | |
| GCCGGAGTGAGCAGACCACG+GGG | - | chr4.4:32818431-32818450 | MS.gene065792:CDS | 70.0% | |
| ATCACCGGCGGCTGTCCCCG+TGG | + | chr4.4:32818449-32818468 | None:intergenic | 75.0% | |
| CAGACCACGGGGACAGCCGC+CGG | - | chr4.4:32818442-32818461 | MS.gene065792:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 32818313 | 32822210 | 32818313 | ID=MS.gene065792 |
| chr4.4 | mRNA | 32818313 | 32822210 | 32818313 | ID=MS.gene065792.t1;Parent=MS.gene065792 |
| chr4.4 | exon | 32821987 | 32822210 | 32821987 | ID=MS.gene065792.t1.exon1;Parent=MS.gene065792.t1 |
| chr4.4 | CDS | 32821987 | 32822210 | 32821987 | ID=cds.MS.gene065792.t1;Parent=MS.gene065792.t1 |
| chr4.4 | exon | 32821137 | 32821210 | 32821137 | ID=MS.gene065792.t1.exon2;Parent=MS.gene065792.t1 |
| chr4.4 | CDS | 32821137 | 32821210 | 32821137 | ID=cds.MS.gene065792.t1;Parent=MS.gene065792.t1 |
| chr4.4 | exon | 32820604 | 32820647 | 32820604 | ID=MS.gene065792.t1.exon3;Parent=MS.gene065792.t1 |
| chr4.4 | CDS | 32820604 | 32820647 | 32820604 | ID=cds.MS.gene065792.t1;Parent=MS.gene065792.t1 |
| chr4.4 | exon | 32820074 | 32820136 | 32820074 | ID=MS.gene065792.t1.exon4;Parent=MS.gene065792.t1 |
| chr4.4 | CDS | 32820074 | 32820136 | 32820074 | ID=cds.MS.gene065792.t1;Parent=MS.gene065792.t1 |
| chr4.4 | exon | 32819821 | 32819967 | 32819821 | ID=MS.gene065792.t1.exon5;Parent=MS.gene065792.t1 |
| chr4.4 | CDS | 32819821 | 32819967 | 32819821 | ID=cds.MS.gene065792.t1;Parent=MS.gene065792.t1 |
| chr4.4 | exon | 32819652 | 32819720 | 32819652 | ID=MS.gene065792.t1.exon6;Parent=MS.gene065792.t1 |
| chr4.4 | CDS | 32819652 | 32819720 | 32819652 | ID=cds.MS.gene065792.t1;Parent=MS.gene065792.t1 |
| chr4.4 | exon | 32819397 | 32819495 | 32819397 | ID=MS.gene065792.t1.exon7;Parent=MS.gene065792.t1 |
| chr4.4 | CDS | 32819397 | 32819495 | 32819397 | ID=cds.MS.gene065792.t1;Parent=MS.gene065792.t1 |
| chr4.4 | exon | 32818823 | 32818893 | 32818823 | ID=MS.gene065792.t1.exon8;Parent=MS.gene065792.t1 |
| chr4.4 | CDS | 32818823 | 32818893 | 32818823 | ID=cds.MS.gene065792.t1;Parent=MS.gene065792.t1 |
| chr4.4 | exon | 32818313 | 32818550 | 32818313 | ID=MS.gene065792.t1.exon9;Parent=MS.gene065792.t1 |
| chr4.4 | CDS | 32818313 | 32818550 | 32818313 | ID=cds.MS.gene065792.t1;Parent=MS.gene065792.t1 |
| Gene Sequence |
| Protein sequence |
