Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067085.t1 | XP_003601900.1 | 89.4 | 180 | 10 | 3 | 30 | 209 | 24 | 194 | 3.80E-83 | 317.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067085.t1 | Q9FXE3 | 48.6 | 181 | 90 | 3 | 30 | 209 | 31 | 209 | 7.6e-40 | 165.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067085.t1 | G7J358 | 89.4 | 180 | 10 | 3 | 30 | 209 | 24 | 194 | 2.8e-83 | 317.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049232 | MS.gene067085 | -0.801557 | 8.51E-49 | -1.69E-46 |
| MS.gene04986 | MS.gene067085 | 0.813253 | 2.81E-51 | -1.69E-46 |
| MS.gene050216 | MS.gene067085 | -0.862404 | 5.19E-64 | -1.69E-46 |
| MS.gene050381 | MS.gene067085 | 0.820782 | 5.72E-53 | -1.69E-46 |
| MS.gene051366 | MS.gene067085 | 0.802512 | 5.42E-49 | -1.69E-46 |
| MS.gene052566 | MS.gene067085 | 0.809219 | 2.11E-50 | -1.69E-46 |
| MS.gene053420 | MS.gene067085 | 0.804648 | 1.95E-49 | -1.69E-46 |
| MS.gene053561 | MS.gene067085 | 0.865527 | 5.54E-65 | -1.69E-46 |
| MS.gene054708 | MS.gene067085 | 0.817695 | 2.89E-52 | -1.69E-46 |
| MS.gene055154 | MS.gene067085 | 0.81852 | 1.88E-52 | -1.69E-46 |
| MS.gene055202 | MS.gene067085 | 0.818692 | 1.72E-52 | -1.69E-46 |
| MS.gene055942 | MS.gene067085 | 0.812046 | 5.16E-51 | -1.69E-46 |
| MS.gene056504 | MS.gene067085 | -0.800591 | 1.34E-48 | -1.69E-46 |
| MS.gene058171 | MS.gene067085 | 0.801535 | 8.60E-49 | -1.69E-46 |
| MS.gene058840 | MS.gene067085 | 0.808287 | 3.34E-50 | -1.69E-46 |
| MS.gene05884 | MS.gene067085 | 0.833811 | 4.30E-56 | -1.69E-46 |
| MS.gene059022 | MS.gene067085 | -0.802334 | 5.89E-49 | -1.69E-46 |
| MS.gene059690 | MS.gene067085 | 0.809834 | 1.56E-50 | -1.69E-46 |
| MS.gene059694 | MS.gene067085 | 0.801171 | 1.02E-48 | -1.69E-46 |
| MS.gene060482 | MS.gene067085 | -0.807453 | 5.02E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067085.t1 | MTR_3g086590 | 90.909 | 209 | 4 | 4 | 1 | 209 | 1 | 194 | 5.46e-135 | 376 |
| MS.gene067085.t1 | MTR_4g104680 | 57.037 | 135 | 56 | 2 | 75 | 209 | 58 | 190 | 1.81e-46 | 162 |
| MS.gene067085.t1 | MTR_1g047990 | 34.109 | 129 | 82 | 1 | 75 | 203 | 78 | 203 | 2.37e-17 | 79.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067085.t1 | AT1G67810 | 50.532 | 188 | 85 | 5 | 25 | 209 | 27 | 209 | 2.17e-56 | 179 |
| MS.gene067085.t1 | AT5G50210 | 48.148 | 135 | 68 | 1 | 75 | 209 | 87 | 219 | 3.60e-37 | 137 |
| MS.gene067085.t1 | AT4G26500 | 35.659 | 129 | 80 | 1 | 75 | 203 | 86 | 211 | 6.49e-17 | 78.6 |
Find 70 sgRNAs with CRISPR-Local
Find 79 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTACACAGGATTTAATTTA+AGG | 0.116156 | 3.4:+80656433 | MS.gene067085:CDS |
| GAGAAGGAGGGAGGGTTAAT+AGG | 0.172032 | 3.4:-80655874 | None:intergenic |
| AACCCGGTCGGACCGGTCTA+AGG | 0.264863 | 3.4:-80656137 | None:intergenic |
| ATAATGTTAAAGCACGTTCT+AGG | 0.299172 | 3.4:+80656371 | MS.gene067085:CDS |
| CAGGTTGTTCGACAGATGTT+TGG | 0.324183 | 3.4:+80656176 | MS.gene067085:CDS |
| AGAAGGAGGGAGGGTTAATA+GGG | 0.328208 | 3.4:-80655873 | None:intergenic |
| GGTTCTGTTGGTGTCTTGTT+TGG | 0.336055 | 3.4:+80656269 | MS.gene067085:CDS |
| AACGGCGGCGGCGTTAAGTT+TGG | 0.345006 | 3.4:-80655918 | None:intergenic |
| TAACGTCGAGAAAGATGTTT+TGG | 0.349720 | 3.4:+80656324 | MS.gene067085:CDS |
| AGACCGGTCCGACCGGGTTC+CGG | 0.370178 | 3.4:+80656141 | MS.gene067085:CDS |
| TTCTCCTACCTTTGTCTATG+TGG | 0.388043 | 3.4:-80656207 | None:intergenic |
| CTCCCTTAGACCGGTCCGAC+CGG | 0.409468 | 3.4:+80656134 | MS.gene067085:CDS |
| CCGACCGGGTTCCGGAGAAC+CGG | 0.419653 | 3.4:+80656149 | MS.gene067085:CDS |
| TTGGTTGGTATGAATGTAGT+AGG | 0.419990 | 3.4:+80656343 | MS.gene067085:CDS |
| CAACCTGTCACCCGGTTCTC+CGG | 0.423018 | 3.4:-80656160 | None:intergenic |
| GTTGAAGGGAGGAGGGTTAA+CGG | 0.424094 | 3.4:-80655969 | None:intergenic |
| GTTGGGAATGGAAATGGAAA+TGG | 0.446723 | 3.4:-80655833 | None:intergenic |
| AGGTTGTTCGACAGATGTTT+GGG | 0.451276 | 3.4:+80656177 | MS.gene067085:CDS |
| TGTCTTGTTTGGATGTTTGA+CGG | 0.452263 | 3.4:+80656280 | MS.gene067085:CDS |
| AAGGAGAAGGAGAAGGAGGG+AGG | 0.455202 | 3.4:-80655883 | None:intergenic |
| TGAGAAGGAGAAGGAGAAGG+AGG | 0.464083 | 3.4:-80655887 | None:intergenic |
| GTTCCGGAGAACCGGGTGAC+AGG | 0.466591 | 3.4:+80656157 | MS.gene067085:CDS |
| GTGGAACTTGCCGTAGAAGT+TGG | 0.470590 | 3.4:-80655851 | None:intergenic |
| GTAGAAGTTGGGAATGGAAA+TGG | 0.471303 | 3.4:-80655839 | None:intergenic |
| TGGTTGGTATGAATGTAGTA+GGG | 0.480747 | 3.4:+80656344 | MS.gene067085:CDS |
| AGGAGAAGGAGAAGGAGGGA+GGG | 0.480933 | 3.4:-80655882 | None:intergenic |
| TGGAACTTGCCGTAGAAGTT+GGG | 0.482966 | 3.4:-80655850 | None:intergenic |
| TCTCCTACCTTTGTCTATGT+GGG | 0.491686 | 3.4:-80656206 | None:intergenic |
| ATTTCCATTCCCAACTTCTA+CGG | 0.492903 | 3.4:+80655841 | MS.gene067085:CDS |
| TCTCCGGAACCCGGTCGGAC+CGG | 0.495621 | 3.4:-80656144 | None:intergenic |
| CTTTATTGCCTCCCTTAGAC+CGG | 0.497345 | 3.4:+80656125 | MS.gene067085:CDS |
| TTCGACAGATGTTTGGGTGG+TGG | 0.504447 | 3.4:+80656183 | MS.gene067085:CDS |
| TCGACGTTAAGCACTTCCTC+AGG | 0.505903 | 3.4:-80656310 | None:intergenic |
| TCCCTTAGACCGGTCCGACC+GGG | 0.506418 | 3.4:+80656135 | MS.gene067085:CDS |
| AATGTGTTGTTGAAGGGAGG+AGG | 0.512295 | 3.4:-80655977 | None:intergenic |
| ATGTGTTGTTGAAGGGAGGA+GGG | 0.516128 | 3.4:-80655976 | None:intergenic |
| GAGAAGGAGAAGGAGAAGGA+GGG | 0.521011 | 3.4:-80655886 | None:intergenic |
| GTTTCAAGCAGACAGCGATT+CGG | 0.525213 | 3.4:+80656234 | MS.gene067085:CDS |
| GATGTTAATGTGTTGTTGAA+GGG | 0.535061 | 3.4:-80655983 | None:intergenic |
| GGCGGCGGCGTTAAGTTTGG+AGG | 0.536844 | 3.4:-80655915 | None:intergenic |
| CGACCGGGTTCCGGAGAACC+GGG | 0.537863 | 3.4:+80656150 | MS.gene067085:CDS |
| TGATGTTAATGTGTTGTTGA+AGG | 0.542600 | 3.4:-80655984 | None:intergenic |
| AGGAGGGAGGGTTAATAGGG+TGG | 0.544493 | 3.4:-80655870 | None:intergenic |
| AAATGAGAAGGAGAAGGAGA+AGG | 0.545044 | 3.4:-80655890 | None:intergenic |
| ACCCGGTCGGACCGGTCTAA+GGG | 0.546406 | 3.4:-80656136 | None:intergenic |
| AGTTTGGAGGAGAAATGAGA+AGG | 0.551683 | 3.4:-80655902 | None:intergenic |
| TAGACAAAGGTAGGAGAATG+AGG | 0.563185 | 3.4:+80656212 | MS.gene067085:CDS |
| TGCCATGCAAAAGGCTACAC+AGG | 0.565139 | 3.4:+80656420 | MS.gene067085:CDS |
| TCACCCGGTTCTCCGGAACC+CGG | 0.567326 | 3.4:-80656153 | None:intergenic |
| GAGGAGAAATGAGAAGGAGA+AGG | 0.570126 | 3.4:-80655896 | None:intergenic |
| CTGTCGAACAACCTGTCACC+CGG | 0.571190 | 3.4:-80656168 | None:intergenic |
| GGTTAACGGAGAGTTTGAGA+TGG | 0.571772 | 3.4:-80655955 | None:intergenic |
| AGATATCGAAGGGGTTCTGT+TGG | 0.579062 | 3.4:+80656257 | MS.gene067085:CDS |
| GTCGATGGGTTCGGAGAGAG+AGG | 0.581664 | 3.4:-80656074 | None:intergenic |
| GTTTGACGGCGCGGAACCTG+AGG | 0.591156 | 3.4:+80656294 | MS.gene067085:CDS |
| CCGGTTCTCCGGAACCCGGT+CGG | 0.599576 | 3.4:-80656149 | None:intergenic |
| AGCGATTCGGAGATATCGAA+GGG | 0.599661 | 3.4:+80656247 | MS.gene067085:CDS |
| CAGCGATTCGGAGATATCGA+AGG | 0.616023 | 3.4:+80656246 | MS.gene067085:CDS |
| TGGCCCACATAGACAAAGGT+AGG | 0.620651 | 3.4:+80656203 | MS.gene067085:CDS |
| GGAGAGAGAGGCAAATTCGA+TGG | 0.622274 | 3.4:-80656062 | None:intergenic |
| TCATCATCACCGTCATCTCA+CGG | 0.622993 | 3.4:+80656013 | MS.gene067085:CDS |
| CTTGCCGTAGAAGTTGGGAA+TGG | 0.632430 | 3.4:-80655845 | None:intergenic |
| TTGTTCGACAGATGTTTGGG+TGG | 0.634015 | 3.4:+80656180 | MS.gene067085:CDS |
| CGGTCGGACCGGTCTAAGGG+AGG | 0.638651 | 3.4:-80656133 | None:intergenic |
| GTTAATGTGTTGTTGAAGGG+AGG | 0.644344 | 3.4:-80655980 | None:intergenic |
| TGTTTGGATGTTTGACGGCG+CGG | 0.685933 | 3.4:+80656285 | MS.gene067085:CDS |
| GTGGTGGCCCACATAGACAA+AGG | 0.687074 | 3.4:+80656199 | MS.gene067085:CDS |
| TCAGTGACACCGTGAGATGA+CGG | 0.694277 | 3.4:-80656022 | None:intergenic |
| CACGTTCTAGGATTAACACG+TGG | 0.721590 | 3.4:+80656383 | MS.gene067085:CDS |
| GCGATTCGGAGATATCGAAG+GGG | 0.771683 | 3.4:+80656248 | MS.gene067085:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATGTAATAGTCTTTTTACT+CGG | - | chr3.4:80656099-80656118 | None:intergenic | 20.0% |
| !!! | ATGGATTTGTTTTGAAGTAA+CGG | - | chr3.4:80655939-80655958 | None:intergenic | 25.0% |
| ATAATGTTAAAGCACGTTCT+AGG | + | chr3.4:80656371-80656390 | MS.gene067085:CDS | 30.0% | |
| ! | GATGTTAATGTGTTGTTGAA+GGG | - | chr3.4:80655986-80656005 | None:intergenic | 30.0% |
| ! | TATTTTCTTTGCCATGCAAA+AGG | + | chr3.4:80656411-80656430 | MS.gene067085:CDS | 30.0% |
| ! | TGATGTTAATGTGTTGTTGA+AGG | - | chr3.4:80655987-80656006 | None:intergenic | 30.0% |
| ATTTCCATTCCCAACTTCTA+CGG | + | chr3.4:80655841-80655860 | MS.gene067085:CDS | 35.0% | |
| ! | TAACGTCGAGAAAGATGTTT+TGG | + | chr3.4:80656324-80656343 | MS.gene067085:CDS | 35.0% |
| ! | TGGTTGGTATGAATGTAGTA+GGG | + | chr3.4:80656344-80656363 | MS.gene067085:CDS | 35.0% |
| ! | TTGGTTGGTATGAATGTAGT+AGG | + | chr3.4:80656343-80656362 | MS.gene067085:CDS | 35.0% |
| !! | TGTCTTGTTTGGATGTTTGA+CGG | + | chr3.4:80656280-80656299 | MS.gene067085:CDS | 35.0% |
| !!! | GATTTGTTTTGAAGTAACGG+CGG | - | chr3.4:80655936-80655955 | None:intergenic | 35.0% |
| AAATGAGAAGGAGAAGGAGA+AGG | - | chr3.4:80655893-80655912 | None:intergenic | 40.0% | |
| AGGTTGTTCGACAGATGTTT+GGG | + | chr3.4:80656177-80656196 | MS.gene067085:CDS | 40.0% | |
| AGTTTGGAGGAGAAATGAGA+AGG | - | chr3.4:80655905-80655924 | None:intergenic | 40.0% | |
| GTAGAAGTTGGGAATGGAAA+TGG | - | chr3.4:80655842-80655861 | None:intergenic | 40.0% | |
| GTTGGGAATGGAAATGGAAA+TGG | - | chr3.4:80655836-80655855 | None:intergenic | 40.0% | |
| TAGACAAAGGTAGGAGAATG+AGG | + | chr3.4:80656212-80656231 | MS.gene067085:CDS | 40.0% | |
| TCTCCTACCTTTGTCTATGT+GGG | - | chr3.4:80656209-80656228 | None:intergenic | 40.0% | |
| TTCTCCTACCTTTGTCTATG+TGG | - | chr3.4:80656210-80656229 | None:intergenic | 40.0% | |
| ! | AGTCTTTTTACTCGGTCGAT+GGG | - | chr3.4:80656091-80656110 | None:intergenic | 40.0% |
| ! | GTTAATGTGTTGTTGAAGGG+AGG | - | chr3.4:80655983-80656002 | None:intergenic | 40.0% |
| ! | TAGTCTTTTTACTCGGTCGA+TGG | - | chr3.4:80656092-80656111 | None:intergenic | 40.0% |
| !!! | GTCGAGAAAGATGTTTTGGT+TGG | + | chr3.4:80656328-80656347 | MS.gene067085:CDS | 40.0% |
| AGAAGGAGGGAGGGTTAATA+GGG | - | chr3.4:80655876-80655895 | None:intergenic | 45.0% | |
| AGATATCGAAGGGGTTCTGT+TGG | + | chr3.4:80656257-80656276 | MS.gene067085:CDS | 45.0% | |
| CAGGTTGTTCGACAGATGTT+TGG | + | chr3.4:80656176-80656195 | MS.gene067085:CDS | 45.0% | |
| CTTTATTGCCTCCCTTAGAC+CGG | + | chr3.4:80656125-80656144 | MS.gene067085:CDS | 45.0% | |
| GAGGAGAAATGAGAAGGAGA+AGG | - | chr3.4:80655899-80655918 | None:intergenic | 45.0% | |
| GGTTAACGGAGAGTTTGAGA+TGG | - | chr3.4:80655958-80655977 | None:intergenic | 45.0% | |
| GTTTCAAGCAGACAGCGATT+CGG | + | chr3.4:80656234-80656253 | MS.gene067085:CDS | 45.0% | |
| TCATCATCACCGTCATCTCA+CGG | + | chr3.4:80656013-80656032 | MS.gene067085:CDS | 45.0% | |
| TGGAACTTGCCGTAGAAGTT+GGG | - | chr3.4:80655853-80655872 | None:intergenic | 45.0% | |
| TTGTTCGACAGATGTTTGGG+TGG | + | chr3.4:80656180-80656199 | MS.gene067085:CDS | 45.0% | |
| ! | AATGTGTTGTTGAAGGGAGG+AGG | - | chr3.4:80655980-80655999 | None:intergenic | 45.0% |
| ! | AGCGATTCGGAGATATCGAA+GGG | + | chr3.4:80656247-80656266 | MS.gene067085:CDS | 45.0% |
| ! | ATCCTGTGTAGCCTTTTGCA+TGG | - | chr3.4:80656425-80656444 | None:intergenic | 45.0% |
| ! | ATGTGTTGTTGAAGGGAGGA+GGG | - | chr3.4:80655979-80655998 | None:intergenic | 45.0% |
| ! | GGTTCTGTTGGTGTCTTGTT+TGG | + | chr3.4:80656269-80656288 | MS.gene067085:CDS | 45.0% |
| !! | CACGTTCTAGGATTAACACG+TGG | + | chr3.4:80656383-80656402 | MS.gene067085:CDS | 45.0% |
| !! | TTTTACTCGGTCGATGGGTT+CGG | - | chr3.4:80656086-80656105 | None:intergenic | 45.0% |
| !!! | TTGTTTTGAAGTAACGGCGG+CGG | - | chr3.4:80655933-80655952 | None:intergenic | 45.0% |
| CTTGCCGTAGAAGTTGGGAA+TGG | - | chr3.4:80655848-80655867 | None:intergenic | 50.0% | |
| GAGAAGGAGAAGGAGAAGGA+GGG | - | chr3.4:80655889-80655908 | None:intergenic | 50.0% | |
| GAGAAGGAGGGAGGGTTAAT+AGG | - | chr3.4:80655877-80655896 | None:intergenic | 50.0% | |
| GGAGAGAGAGGCAAATTCGA+TGG | - | chr3.4:80656065-80656084 | None:intergenic | 50.0% | |
| GTGGAACTTGCCGTAGAAGT+TGG | - | chr3.4:80655854-80655873 | None:intergenic | 50.0% | |
| GTTGAAGGGAGGAGGGTTAA+CGG | - | chr3.4:80655972-80655991 | None:intergenic | 50.0% | |
| TCAGTGACACCGTGAGATGA+CGG | - | chr3.4:80656025-80656044 | None:intergenic | 50.0% | |
| TCGACGTTAAGCACTTCCTC+AGG | - | chr3.4:80656313-80656332 | None:intergenic | 50.0% | |
| TGAGAAGGAGAAGGAGAAGG+AGG | - | chr3.4:80655890-80655909 | None:intergenic | 50.0% | |
| TGCCATGCAAAAGGCTACAC+AGG | + | chr3.4:80656420-80656439 | MS.gene067085:CDS | 50.0% | |
| TGGCCCACATAGACAAAGGT+AGG | + | chr3.4:80656203-80656222 | MS.gene067085:CDS | 50.0% | |
| TGTTTGGATGTTTGACGGCG+CGG | + | chr3.4:80656285-80656304 | MS.gene067085:CDS | 50.0% | |
| TTCGACAGATGTTTGGGTGG+TGG | + | chr3.4:80656183-80656202 | MS.gene067085:CDS | 50.0% | |
| ! | CAGCGATTCGGAGATATCGA+AGG | + | chr3.4:80656246-80656265 | MS.gene067085:CDS | 50.0% |
| ! | GCGATTCGGAGATATCGAAG+GGG | + | chr3.4:80656248-80656267 | MS.gene067085:CDS | 50.0% |
| AAGGAGAAGGAGAAGGAGGG+AGG | - | chr3.4:80655886-80655905 | None:intergenic | 55.0% | |
| AGGAGAAGGAGAAGGAGGGA+GGG | - | chr3.4:80655885-80655904 | None:intergenic | 55.0% | |
| AGGAGGGAGGGTTAATAGGG+TGG | - | chr3.4:80655873-80655892 | None:intergenic | 55.0% | |
| CTGTCGAACAACCTGTCACC+CGG | - | chr3.4:80656171-80656190 | None:intergenic | 55.0% | |
| GTGGTGGCCCACATAGACAA+AGG | + | chr3.4:80656199-80656218 | MS.gene067085:CDS | 55.0% | |
| AACGGCGGCGGCGTTAAGTT+TGG | - | chr3.4:80655921-80655940 | None:intergenic | 60.0% | |
| CAACCTGTCACCCGGTTCTC+CGG | - | chr3.4:80656163-80656182 | None:intergenic | 60.0% | |
| ! | GTCGATGGGTTCGGAGAGAG+AGG | - | chr3.4:80656077-80656096 | None:intergenic | 60.0% |
| AACCCGGTCGGACCGGTCTA+AGG | - | chr3.4:80656140-80656159 | None:intergenic | 65.0% | |
| ACCCGGTCGGACCGGTCTAA+GGG | - | chr3.4:80656139-80656158 | None:intergenic | 65.0% | |
| CTCCCTTAGACCGGTCCGAC+CGG | + | chr3.4:80656134-80656153 | MS.gene067085:CDS | 65.0% | |
| GGCGGCGGCGTTAAGTTTGG+AGG | - | chr3.4:80655918-80655937 | None:intergenic | 65.0% | |
| GTTCCGGAGAACCGGGTGAC+AGG | + | chr3.4:80656157-80656176 | MS.gene067085:CDS | 65.0% | |
| GTTTGACGGCGCGGAACCTG+AGG | + | chr3.4:80656294-80656313 | MS.gene067085:CDS | 65.0% | |
| TCACCCGGTTCTCCGGAACC+CGG | - | chr3.4:80656156-80656175 | None:intergenic | 65.0% | |
| TCCCTTAGACCGGTCCGACC+GGG | + | chr3.4:80656135-80656154 | MS.gene067085:CDS | 65.0% | |
| AGACCGGTCCGACCGGGTTC+CGG | + | chr3.4:80656141-80656160 | MS.gene067085:CDS | 70.0% | |
| CCGACCGGGTTCCGGAGAAC+CGG | + | chr3.4:80656149-80656168 | MS.gene067085:CDS | 70.0% | |
| CCGGTTCTCCGGAACCCGGT+CGG | - | chr3.4:80656152-80656171 | None:intergenic | 70.0% | |
| CGACCGGGTTCCGGAGAACC+GGG | + | chr3.4:80656150-80656169 | MS.gene067085:CDS | 70.0% | |
| CGGTCGGACCGGTCTAAGGG+AGG | - | chr3.4:80656136-80656155 | None:intergenic | 70.0% | |
| TCTCCGGAACCCGGTCGGAC+CGG | - | chr3.4:80656147-80656166 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 80655824 | 80656453 | 80655824 | ID=MS.gene067085 |
| chr3.4 | mRNA | 80655824 | 80656453 | 80655824 | ID=MS.gene067085.t1;Parent=MS.gene067085 |
| chr3.4 | exon | 80655824 | 80656453 | 80655824 | ID=MS.gene067085.t1.exon1;Parent=MS.gene067085.t1 |
| chr3.4 | CDS | 80655824 | 80656453 | 80655824 | ID=cds.MS.gene067085.t1;Parent=MS.gene067085.t1 |
| Gene Sequence |
| Protein sequence |
