AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene054708


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene054708.t1 MTR_5g045160 92.354 667 37 3 1 656 1 664 0.0 1202
MS.gene054708.t1 MTR_6g445440 83.082 662 80 6 1 656 1 636 0.0 1097
MS.gene054708.t1 MTR_3g103410 71.170 718 129 8 3 656 4 707 0.0 994
MS.gene054708.t1 MTR_5g045130 85.010 507 65 3 152 656 2 499 0.0 881
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene054708.t1 AT5G13210 59.078 694 225 9 1 656 1 673 0.0 817
MS.gene054708.t1 AT5G43400 55.750 687 241 7 1 656 1 655 0.0 769
MS.gene054708.t1 AT5G43390 55.022 687 229 9 2 656 5 643 0.0 738
MS.gene054708.t1 AT3G24780 58.211 615 196 7 50 621 107 703 0.0 716

Find 201 sgRNAs with CRISPR-Local

Find 225 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCATGAAGAAACTTGAAAT+TGG 0.206773 5.3:+32739912 None:intergenic
GTGGTGGTGGTGGTAGGGTT+AGG 0.242127 5.3:+32740657 None:intergenic
GCCTTCTTTGTTGGACTTGC+CGG 0.260625 5.3:+32740371 None:intergenic
GAATCTGCTGACATTGTTCT+TGG 0.284328 5.3:-32738849 MS.gene054708:CDS
AAATCAGTCTTGCTGCTAAA+TGG 0.287484 5.3:-32739819 MS.gene054708:CDS
GCTTCTATGCTGCCGCTCTA+TGG 0.294484 5.3:-32740350 MS.gene054708:CDS
CTTCTCCTTATAAAACTTCA+TGG 0.297463 5.3:+32739558 None:intergenic
TGAAGATGAAGATTTCCTTT+TGG 0.298695 5.3:+32740170 None:intergenic
CTTGCTGTGTGTGATGTGTC+TGG 0.301225 5.3:-32739340 MS.gene054708:CDS
ATATGCGATCAAACACCTTC+TGG 0.312936 5.3:+32739125 None:intergenic
GAGTTGCCTGAGGTGTTTAT+TGG 0.349776 5.3:-32739628 MS.gene054708:CDS
GGGGTTTGATTCCTTACAAT+AGG 0.355708 5.3:-32739594 MS.gene054708:CDS
TGGTGGTGGTGGTAGGGTTA+GGG 0.356380 5.3:+32740658 None:intergenic
TCAACCCCATCGGTGGGTTT+CGG 0.356465 5.3:+32740568 None:intergenic
ATCAAGCGTCTGCAAACTCT+TGG 0.365158 5.3:-32739024 MS.gene054708:CDS
AGGAGGCGCATTATGCTTAT+AGG 0.369882 5.3:-32739702 MS.gene054708:CDS
TGTTTATTGGTGCTAATCAA+TGG 0.374653 5.3:-32739615 MS.gene054708:CDS
GCAGCTTCCATGGCTTCTAC+AGG 0.387857 5.3:+32738806 None:intergenic
CCTAGTGATTGCTTGGTAAT+CGG 0.388642 5.3:+32738997 None:intergenic
GGAGAGGTTTGAGAAGTACT+TGG 0.389397 5.3:-32739518 MS.gene054708:CDS
AGAAGACGATAGAGGATCTC+AGG 0.394537 5.3:+32740252 None:intergenic
GCCATGGAAGCTGCCATCGC+TGG 0.399741 5.3:-32738797 MS.gene054708:CDS
GTGTGTAGCATTGGGGTTGT+TGG 0.401844 5.3:-32739290 MS.gene054708:CDS
GTTTGTGAGGAACATGGATT+GGG 0.401906 5.3:-32739164 MS.gene054708:CDS
GAGTGGATGGAAAGGAAATC+TGG 0.403522 5.3:-32740195 MS.gene054708:CDS
AGCATAGAAGCCTTCTTTGT+TGG 0.404217 5.3:+32740362 None:intergenic
GGGTTTGATTCCTTACAATA+GGG 0.405295 5.3:-32739593 MS.gene054708:CDS
GAAGGTGTTTGATCGCATAT+TGG 0.405938 5.3:-32739122 MS.gene054708:CDS
CGATGTCTTCGTCGATCAAA+TGG 0.407547 5.3:-32740619 MS.gene054708:CDS
GGAAACTGCTCATGCTTTGA+AGG 0.409132 5.3:-32739989 MS.gene054708:CDS
GGAGGCGCATTATGCTTATA+GGG 0.411872 5.3:-32739701 MS.gene054708:CDS
GTTTATTGGTGCTAATCAAT+GGG 0.412509 5.3:-32739614 MS.gene054708:CDS
ATCGACGAAGACATCGTTAG+TGG 0.418636 5.3:+32740626 None:intergenic
CTTTCTGAGTGGATGGCACC+GGG 0.421088 5.3:+32738900 None:intergenic
CTCCGTGGTGTTCGTGGTAC+CGG 0.428319 5.3:-32740390 MS.gene054708:CDS
CACAACTAGTTTCTGATACT+CGG 0.428515 5.3:+32738772 None:intergenic
TATACTTCCTAGTGATTGCT+TGG 0.431774 5.3:+32738990 None:intergenic
AGTTTGTGAGGAACATGGAT+TGG 0.432352 5.3:-32739165 MS.gene054708:CDS
ATGGAGGTGTGTGTAGCATT+GGG 0.432777 5.3:-32739298 MS.gene054708:CDS
TTACAATAGGGTTGCTTCTG+TGG 0.434673 5.3:-32739581 MS.gene054708:CDS
CCGTTGACTCTTCCTTTGAT+CGG 0.435307 5.3:-32739789 MS.gene054708:CDS
AGTGGTTGTGGTGGTGGTGG+TGG 0.436280 5.3:+32740644 None:intergenic
TCATGAAGAAACTTGAAATT+GGG 0.436482 5.3:+32739913 None:intergenic
ACTAGGAAGTATAGAAAGAA+AGG 0.441720 5.3:-32738980 MS.gene054708:CDS
GCCAGCGATGGCAGCTTCCA+TGG 0.443302 5.3:+32738796 None:intergenic
GTTCCTCACAAACTTTGTCT+TGG 0.445968 5.3:+32739174 None:intergenic
GTGAAGGAACATTGGTAGCT+AGG 0.448466 5.3:+32740304 None:intergenic
ACAACTAGTTTCTGATACTC+GGG 0.457651 5.3:+32738773 None:intergenic
TGTAACCTCCGTGGTGTTCG+TGG 0.460467 5.3:-32740396 MS.gene054708:CDS
GTTCCTTCACTCGCTAACTT+TGG 0.462173 5.3:-32740291 MS.gene054708:CDS
CGTTGATGATTTGCTCAAGA+AGG 0.468757 5.3:-32739380 MS.gene054708:CDS
CCTTTCTGAGTGGATGGCAC+CGG 0.470831 5.3:+32738899 None:intergenic
TATGGAGGTGTGTGTAGCAT+TGG 0.471438 5.3:-32739299 MS.gene054708:CDS
ATAGGGTTCGTGATCGTTTG+AGG 0.471872 5.3:-32739684 MS.gene054708:CDS
GATTGTAGAGTGTAGATCTC+AGG 0.472510 5.3:+32740684 None:intergenic
GAAGACATCGTTAGTGGTTG+TGG 0.479010 5.3:+32740632 None:intergenic
AGAGGTGGCAACGAGAGTTA+AGG 0.479298 5.3:-32740019 MS.gene054708:CDS
TCTAGCAAAAGAATTGAAGT+TGG 0.482544 5.3:+32740593 None:intergenic
GCCACTCCTTTCTGAGTGGA+TGG 0.483109 5.3:+32738893 None:intergenic
ATCGTTAGTGGTTGTGGTGG+TGG 0.483318 5.3:+32740638 None:intergenic
TTGCTGTGTGTGATGTGTCT+GGG 0.483780 5.3:-32739339 MS.gene054708:CDS
GCCTCAGCTTCATGTGATTG+AGG 0.484160 5.3:-32739212 MS.gene054708:CDS
AGGAGGATCAGATGATTAAG+AGG 0.485373 5.3:-32739075 MS.gene054708:CDS
AAGTATAGAAAGAAAGGGTA+TGG 0.487906 5.3:-32738974 MS.gene054708:CDS
TACTTGGAGGATGTGAAGGC+AGG 0.488941 5.3:-32739502 MS.gene054708:CDS
AGTGTCTCAGAAGGAGTATC+AGG 0.489014 5.3:+32740477 None:intergenic
GTAATAACCTTCCCTTTCCA+TGG 0.491644 5.3:+32739247 None:intergenic
GTATCAGAAACTAGTTGTGC+TGG 0.495109 5.3:-32738768 MS.gene054708:CDS
AATGCTACACACACCTCCAT+AGG 0.501130 5.3:+32739301 None:intergenic
GAGTATGCATGGGACCCCTA+TGG 0.506823 5.3:-32739317 MS.gene054708:CDS
GGAAGGTTATTACTTTCAGC+AGG 0.508350 5.3:-32739237 MS.gene054708:CDS
ACAGAAGCAACCCTATTGTA+AGG 0.510787 5.3:+32739583 None:intergenic
GGAATATGAAGGTGTGGAGG+AGG 0.511393 5.3:-32739719 MS.gene054708:CDS
CCTCAGCTTCATGTGATTGA+GGG 0.511737 5.3:-32739211 MS.gene054708:CDS
CTGATACTCGGGGCCAGCGA+TGG 0.513732 5.3:+32738784 None:intergenic
CACTCAGAAAGGAGTGGCAC+TGG 0.513905 5.3:-32738888 MS.gene054708:CDS
TCAAGCGTCTGCAAACTCTT+GGG 0.514244 5.3:-32739023 MS.gene054708:CDS
TGCCAAGAGGATCTTCCCTC+GGG 0.516133 5.3:-32739743 MS.gene054708:CDS
ATTATAGAGTCTTTGCGTGA+TGG 0.519156 5.3:-32739439 MS.gene054708:CDS
CTCCCGAGGGAAGATCCTCT+TGG 0.520806 5.3:+32739741 None:intergenic
CAGCTTCCATGGCTTCTACA+GGG 0.521562 5.3:+32738807 None:intergenic
GAGGTTTGAGAAGTACTTGG+AGG 0.521875 5.3:-32739515 MS.gene054708:CDS
TGAAGGAACATTGGTAGCTA+GGG 0.522147 5.3:+32740305 None:intergenic
ATATTGGATGTGGCTGTCAA+TGG 0.529469 5.3:-32739106 MS.gene054708:CDS
TCACCAACGTTTCTCTCCAC+TGG 0.531788 5.3:-32740534 MS.gene054708:CDS
GGAGGTTACAGACGAGTTTG+AGG 0.532302 5.3:+32740409 None:intergenic
ATGCTACACACACCTCCATA+GGG 0.534414 5.3:+32739302 None:intergenic
GTTGATGATTTGCTCAAGAA+GGG 0.536020 5.3:-32739379 MS.gene054708:CDS
GAGGTTACAGACGAGTTTGA+GGG 0.536086 5.3:+32740410 None:intergenic
GATGTGTCTGGGAGTATGCA+TGG 0.541073 5.3:-32739328 MS.gene054708:CDS
GTTAGTGGTTGTGGTGGTGG+TGG 0.543529 5.3:+32740641 None:intergenic
ACCGGCAAGTCCAACAAAGA+AGG 0.544742 5.3:-32740372 MS.gene054708:CDS
TCGAGAGGCTCAAACTAGCT+TGG 0.545154 5.3:-32740452 MS.gene054708:CDS
AAAGGAGTGGCACTGGTAAG+TGG 0.549583 5.3:-32738881 MS.gene054708:CDS
GACAAAGTTTGTGAGGAACA+TGG 0.551414 5.3:-32739170 MS.gene054708:CDS
TTGCCAAGAGGATCTTCCCT+CGG 0.551799 5.3:-32739744 MS.gene054708:CDS
AAAGGAAATCTGGATCCAAA+AGG 0.552387 5.3:-32740185 MS.gene054708:CDS
AACCTTCGAGAAGACGATAG+AGG 0.553075 5.3:+32740244 None:intergenic
CAAGGATAACAAAGGGTGGA+AGG 0.554421 5.3:-32740070 MS.gene054708:CDS
TGAACGAGGAACCATGGAAA+GGG 0.554458 5.3:-32739258 MS.gene054708:CDS
TATTGGATGTGGCTGTCAAT+GGG 0.560043 5.3:-32739105 MS.gene054708:CDS
ATGCTTTGAAGGAAGAGAAG+AGG 0.561707 5.3:-32739978 MS.gene054708:CDS
TGTTGTTGTAGTTCTTGTTG+TGG 0.562180 5.3:+32740100 None:intergenic
CCGATTACCAAGCAATCACT+AGG 0.565104 5.3:-32738997 MS.gene054708:CDS
GGAAGAGAAGAGGATTGCCT+TGG 0.568272 5.3:-32739968 MS.gene054708:CDS
CCCTCAATCACATGAAGCTG+AGG 0.568852 5.3:+32739211 None:intergenic
TAGCCAAAGTTAGCGAGTGA+AGG 0.568875 5.3:+32740288 None:intergenic
ATCCTCTATCGTCTTCTCGA+AGG 0.571604 5.3:-32740246 MS.gene054708:CDS
CCGGTGCCATCCACTCAGAA+AGG 0.571959 5.3:-32738899 MS.gene054708:CDS
AACGCAGAAAGAAGAGTGGA+TGG 0.573710 5.3:-32740208 MS.gene054708:CDS
TGTTGTAGTTCTTGTTGTGG+TGG 0.574406 5.3:+32740103 None:intergenic
GTTTGATCGCATATTGGATG+TGG 0.574432 5.3:-32739116 MS.gene054708:CDS
CTAGGAAGTATAGAAAGAAA+GGG 0.575902 5.3:-32738979 MS.gene054708:CDS
AACGAGAGTTAAGGCTCAGA+AGG 0.578204 5.3:-32740010 MS.gene054708:CDS
AGAAACCGAAACCCACCGAT+GGG 0.579222 5.3:-32740573 MS.gene054708:CDS
GGGAAGACTACTATTGCTGC+TGG 0.579975 5.3:-32739481 MS.gene054708:CDS
CAGTGCCACTCCTTTCTGAG+TGG 0.580391 5.3:+32738889 None:intergenic
GAGAGACTCGAAGGCCACCC+CGG 0.584902 5.3:-32738918 MS.gene054708:CDS
AGGGAAGATCCTCTTGGCAA+TGG 0.584939 5.3:+32739747 None:intergenic
GAAGACGATAGAGGATCTCA+GGG 0.585178 5.3:+32740253 None:intergenic
TTGGAATCTGAGAGACTCGA+AGG 0.585593 5.3:-32738927 MS.gene054708:CDS
GATCTTTGTCTTTAGTGACA+TGG 0.587705 5.3:-32739053 MS.gene054708:CDS
TTTCAGTCAACCCCATCGGT+GGG 0.587798 5.3:+32740562 None:intergenic
TTGAACGAGGAACCATGGAA+AGG 0.588133 5.3:-32739259 MS.gene054708:CDS
AGACTCCATCGTGACTAAAG+AGG 0.589624 5.3:-32740037 MS.gene054708:CDS
TTCCCTCGGGAGGAATATGA+AGG 0.591428 5.3:-32739730 MS.gene054708:CDS
TATAAGCCCTGTAGAAGCCA+TGG 0.596604 5.3:-32738813 MS.gene054708:CDS
TCAAAGGAAGAGTCAACGGA+AGG 0.598171 5.3:+32739793 None:intergenic
CTCAGCTTCATGTGATTGAG+GGG 0.599232 5.3:-32739210 MS.gene054708:CDS
ACATTGTTCTTGGATAATGA+AGG 0.599605 5.3:-32738839 MS.gene054708:CDS
AGGACGTCAAGGATAACAAA+GGG 0.599606 5.3:-32740077 MS.gene054708:CDS
TTTATTGGTGCTAATCAATG+GGG 0.599749 5.3:-32739613 MS.gene054708:CDS
TTTGTGAGGAACATGGATTG+GGG 0.600633 5.3:-32739163 MS.gene054708:CDS
AGAAAGAAGAGTGGATGGAA+AGG 0.602721 5.3:-32740203 MS.gene054708:CDS
CTGAATTGAACGAGGAACCA+TGG 0.603342 5.3:-32739264 MS.gene054708:CDS
GAAGTACTTGGAGGATGTGA+AGG 0.604063 5.3:-32739506 MS.gene054708:CDS
ACTTGGAGGATGTGAAGGCA+GGG 0.604217 5.3:-32739501 MS.gene054708:CDS
TGTGTTGGTGCCGTTGAGGA+AGG 0.604572 5.3:-32739656 MS.gene054708:CDS
GTGAAGTGGCTGAGTTGCAG+TGG 0.607162 5.3:-32739411 MS.gene054708:CDS
CCGATCAAAGGAAGAGTCAA+CGG 0.608539 5.3:+32739789 None:intergenic
GGTGCCGTTGAGGAAGGTGT+TGG 0.609929 5.3:-32739650 MS.gene054708:CDS
GAGTCTTTGCGTGATGGAGA+TGG 0.610505 5.3:-32739433 MS.gene054708:CDS
CTCTCGACGAGTGTCTCAGA+AGG 0.610855 5.3:+32740468 None:intergenic
CACCTTCATATTCCTCCCGA+GGG 0.610961 5.3:+32739728 None:intergenic
GTTAGCGAGTGAAGGAACAT+TGG 0.613012 5.3:+32740296 None:intergenic
ATGTGTCTGGGAGTATGCAT+GGG 0.615466 5.3:-32739327 MS.gene054708:CDS
CTGAGTGGATGGCACCGGGG+TGG 0.616153 5.3:+32738904 None:intergenic
CTACAACAACAAGGACGTCA+AGG 0.616279 5.3:-32740088 MS.gene054708:CDS
TAACAGCGTTGACCGATCAA+AGG 0.617986 5.3:+32739777 None:intergenic
TGCTCAAGAAGGGAAAGATG+AGG 0.619614 5.3:-32739369 MS.gene054708:CDS
GGCTGTCAATGGGAATCTCA+AGG 0.621591 5.3:-32739095 MS.gene054708:CDS
TAGAAACCGAAACCCACCGA+TGG 0.622403 5.3:-32740574 MS.gene054708:CDS
AGGTGGACCAACGAGAGTGA+CGG 0.624845 5.3:+32740704 None:intergenic
TGCCACCTCTTTAGTCACGA+TGG 0.625845 5.3:+32740032 None:intergenic
ACACCTTCATATTCCTCCCG+AGG 0.626089 5.3:+32739727 None:intergenic
TTAGCACCAATAAACACCTC+AGG 0.626398 5.3:+32739622 None:intergenic
AAGGATAACAAAGGGTGGAA+GGG 0.628322 5.3:-32740069 MS.gene054708:CDS
ATGGCCGCCGTCACTCTCGT+TGG 0.629832 5.3:-32740711 MS.gene054708:CDS
AACTCCAACACCTTCCTCAA+CGG 0.630137 5.3:+32739646 None:intergenic
TTGTGAGGAACATGGATTGG+GGG 0.639683 5.3:-32739162 MS.gene054708:CDS
CAAGAGGATCTTCCCTCGGG+AGG 0.641432 5.3:-32739740 MS.gene054708:CDS
CAACAAGAACTACAACAACA+AGG 0.642561 5.3:-32740097 MS.gene054708:CDS
AGTCCAAGACAAAGTTTGTG+AGG 0.642724 5.3:-32739177 MS.gene054708:CDS
TCGGGAGGAATATGAAGGTG+TGG 0.645333 5.3:-32739725 MS.gene054708:CDS
GGAAGAAGAAATCGAGACAA+GGG 0.645821 5.3:+32740508 None:intergenic
TGTAGAGTGTAGATCTCAGG+TGG 0.646826 5.3:+32740687 None:intergenic
TGGAGGTGTGTGTAGCATTG+GGG 0.646940 5.3:-32739297 MS.gene054708:CDS
AAGGAGTATCAGGAACAACA+TGG 0.647046 5.3:+32740487 None:intergenic
TCGTTTGAGGAAAGATGTGT+TGG 0.647723 5.3:-32739671 MS.gene054708:CDS
GAAGGTGTTGGAGTTGCCTG+AGG 0.648237 5.3:-32739638 MS.gene054708:CDS
CTTCTGAGACACTCGTCGAG+AGG 0.650304 5.3:-32740467 MS.gene054708:CDS
AAGATGTGTTGGTGCCGTTG+AGG 0.652976 5.3:-32739660 MS.gene054708:CDS
AAGGACGTCAAGGATAACAA+AGG 0.653186 5.3:-32740078 MS.gene054708:CDS
CAAAGGAAGAGTCAACGGAA+GGG 0.653236 5.3:+32739794 None:intergenic
CTCCATCGTGACTAAAGAGG+TGG 0.653770 5.3:-32740034 MS.gene054708:CDS
CGAGGAACCATGGAAAGGGA+AGG 0.654288 5.3:-32739254 MS.gene054708:CDS
GCAAAACGCAGAAAGAAGAG+TGG 0.655725 5.3:-32740212 MS.gene054708:CDS
TATGCATGGGACCCCTATGG+AGG 0.657200 5.3:-32739314 MS.gene054708:CDS
GACATCGTTAGTGGTTGTGG+TGG 0.658761 5.3:+32740635 None:intergenic
TGGAAGAAGAAATCGAGACA+AGG 0.663800 5.3:+32740507 None:intergenic
GCGTGATGGAGATGGTGAAG+TGG 0.668727 5.3:-32739425 MS.gene054708:CDS
GATGAACACTGATTTCCAGA+AGG 0.669878 5.3:-32739140 MS.gene054708:CDS
AAAGACTCTATAATCTCGTG+AGG 0.670125 5.3:+32739448 None:intergenic
ACGTCAAGGATAACAAAGGG+TGG 0.670879 5.3:-32740074 MS.gene054708:CDS
ATCGAGACAAGGGTTACCAG+TGG 0.673142 5.3:+32740518 None:intergenic
TCAGCTTCATGTGATTGAGG+GGG 0.673206 5.3:-32739209 MS.gene054708:CDS
GTTACAGACGAGTTTGAGGG+CGG 0.674635 5.3:+32740413 None:intergenic
TGGACCAACGAGAGTGACGG+CGG 0.675637 5.3:+32740707 None:intergenic
GCCATCCACTCAGAAAGGAG+TGG 0.675952 5.3:-32738894 MS.gene054708:CDS
GGAGGAATATGAAGGTGTGG+AGG 0.684289 5.3:-32739722 MS.gene054708:CDS
TGCTACACACACCTCCATAG+GGG 0.689495 5.3:+32739303 None:intergenic
TTACCAGTGGAGAGAAACGT+TGG 0.690822 5.3:+32740531 None:intergenic
TTTCTGAGTGGATGGCACCG+GGG 0.698885 5.3:+32738901 None:intergenic
CAACTAGTTTCTGATACTCG+GGG 0.701259 5.3:+32738774 None:intergenic
TGCCGGTACCACGAACACCA+CGG 0.707609 5.3:+32740388 None:intergenic
TATGTGAGACCATTGCCAAG+AGG 0.711412 5.3:-32739756 MS.gene054708:CDS
GAAACCGAAACCCACCGATG+GGG 0.722976 5.3:-32740572 MS.gene054708:CDS
AAACTCGTCTGTAACCTCCG+TGG 0.731806 5.3:-32740405 MS.gene054708:CDS
GTTGGTGTCTGAATTGAACG+AGG 0.758083 5.3:-32739272 MS.gene054708:CDS
TGTCAATGGGAATCTCAAGG+AGG 0.758838 5.3:-32739092 MS.gene054708:CDS
CGGTACCACGAACACCACGG+AGG 0.805564 5.3:+32740391 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! ATCATGAAGAAACTTGAAAT+TGG + chr5.3:32739565-32739584 None:intergenic 25.0%
! TCATGAAGAAACTTGAAATT+GGG + chr5.3:32739564-32739583 None:intergenic 25.0%
! TTATTCCTCTCCTTAAAAAA+GGG + chr5.3:32739335-32739354 None:intergenic 25.0%
! TTTATTCCTCTCCTTAAAAA+AGG + chr5.3:32739336-32739355 None:intergenic 25.0%
AAGTATAGAAAGAAAGGGTA+TGG - chr5.3:32740500-32740519 MS.gene054708:CDS 30.0%
ACATTGTTCTTGGATAATGA+AGG - chr5.3:32740635-32740654 MS.gene054708:CDS 30.0%
AGATTCCAAAAAACTATCTG+AGG + chr5.3:32740536-32740555 None:intergenic 30.0%
CTTCTCCTTATAAAACTTCA+TGG + chr5.3:32739919-32739938 None:intergenic 30.0%
TATTCCTCTCCTTAAAAAAG+GGG + chr5.3:32739334-32739353 None:intergenic 30.0%
TCTAGCAAAAGAATTGAAGT+TGG + chr5.3:32738884-32738903 None:intergenic 30.0%
! ACTAGGAAGTATAGAAAGAA+AGG - chr5.3:32740494-32740513 MS.gene054708:CDS 30.0%
! ATTTTCATGAAACCATAGAG+CGG + chr5.3:32739139-32739158 None:intergenic 30.0%
! CTAGGAAGTATAGAAAGAAA+GGG - chr5.3:32740495-32740514 MS.gene054708:CDS 30.0%
! TGAAGATGAAGATTTCCTTT+TGG + chr5.3:32739307-32739326 None:intergenic 30.0%
!! GTTTATTGGTGCTAATCAAT+GGG - chr5.3:32739860-32739879 MS.gene054708:CDS 30.0%
!! TGTTTATTGGTGCTAATCAA+TGG - chr5.3:32739859-32739878 MS.gene054708:CDS 30.0%
!! TTTATTGGTGCTAATCAATG+GGG - chr5.3:32739861-32739880 MS.gene054708:CDS 30.0%
!! TTTTGCTGATTGTTTGAAGA+AGG - chr5.3:32739599-32739618 MS.gene054708:CDS 30.0%
!!! ATCTCGAGTTTTTGAAATCT+GGG - chr5.3:32739622-32739641 MS.gene054708:CDS 30.0%
!!! GAAGTTTTTGAAGCATGATA+AGG - chr5.3:32739935-32739954 MS.gene054708:CDS 30.0%
AAAGACTCTATAATCTCGTG+AGG + chr5.3:32740029-32740048 None:intergenic 35.0%
AAAGGAAATCTGGATCCAAA+AGG - chr5.3:32739289-32739308 MS.gene054708:CDS 35.0%
AAATCAGTCTTGCTGCTAAA+TGG - chr5.3:32739655-32739674 MS.gene054708:CDS 35.0%
ATTATAGAGTCTTTGCGTGA+TGG - chr5.3:32740035-32740054 MS.gene054708:CDS 35.0%
CAACAAGAACTACAACAACA+AGG - chr5.3:32739377-32739396 MS.gene054708:CDS 35.0%
GATCTTTGTCTTTAGTGACA+TGG - chr5.3:32740421-32740440 MS.gene054708:CDS 35.0%
GGGTTTGATTCCTTACAATA+GGG - chr5.3:32739881-32739900 MS.gene054708:CDS 35.0%
TATACTTCCTAGTGATTGCT+TGG + chr5.3:32740487-32740506 None:intergenic 35.0%
TGTTGTTGTAGTTCTTGTTG+TGG + chr5.3:32739377-32739396 None:intergenic 35.0%
! ACAACTAGTTTCTGATACTC+GGG + chr5.3:32740704-32740723 None:intergenic 35.0%
! CACAACTAGTTTCTGATACT+CGG + chr5.3:32740705-32740724 None:intergenic 35.0%
!! ATCAACAAGCTTTTTAGCCA+AGG + chr5.3:32739526-32739545 None:intergenic 35.0%
!! GTTGATGATTTGCTCAAGAA+GGG - chr5.3:32740095-32740114 MS.gene054708:CDS 35.0%
!! TGTGGCCATGAAGTTTTATA+AGG - chr5.3:32739911-32739930 MS.gene054708:CDS 35.0%
!!! CTTCATCAACCCCTTTTTTA+AGG - chr5.3:32739322-32739341 MS.gene054708:CDS 35.0%
!!! GATCTCGAGTTTTTGAAATC+TGG - chr5.3:32739621-32739640 MS.gene054708:CDS 35.0%
!!! TTTTGAAGCATGATAAGGAG+AGG - chr5.3:32739940-32739959 MS.gene054708:CDS 35.0%
AAGGACGTCAAGGATAACAA+AGG - chr5.3:32739396-32739415 MS.gene054708:CDS 40.0%
AAGGATAACAAAGGGTGGAA+GGG - chr5.3:32739405-32739424 MS.gene054708:CDS 40.0%
ACAGAAGCAACCCTATTGTA+AGG + chr5.3:32739894-32739913 None:intergenic 40.0%
AGAAAGAAGAGTGGATGGAA+AGG - chr5.3:32739271-32739290 MS.gene054708:CDS 40.0%
AGCATAGAAGCCTTCTTTGT+TGG + chr5.3:32739115-32739134 None:intergenic 40.0%
AGGACGTCAAGGATAACAAA+GGG - chr5.3:32739397-32739416 MS.gene054708:CDS 40.0%
AGGAGGATCAGATGATTAAG+AGG - chr5.3:32740399-32740418 MS.gene054708:CDS 40.0%
AGTCCAAGACAAAGTTTGTG+AGG - chr5.3:32740297-32740316 MS.gene054708:CDS 40.0%
AGTTTGTGAGGAACATGGAT+TGG - chr5.3:32740309-32740328 MS.gene054708:CDS 40.0%
ATATGCGATCAAACACCTTC+TGG + chr5.3:32740352-32740371 None:intergenic 40.0%
ATATTGGATGTGGCTGTCAA+TGG - chr5.3:32740368-32740387 MS.gene054708:CDS 40.0%
GAATCTGCTGACATTGTTCT+TGG - chr5.3:32740625-32740644 MS.gene054708:CDS 40.0%
GACAAAGTTTGTGAGGAACA+TGG - chr5.3:32740304-32740323 MS.gene054708:CDS 40.0%
GATTGTAGAGTGTAGATCTC+AGG + chr5.3:32738793-32738812 None:intergenic 40.0%
GGAAGAAGAAATCGAGACAA+GGG + chr5.3:32738969-32738988 None:intergenic 40.0%
GGAAGGTTATTACTTTCAGC+AGG - chr5.3:32740237-32740256 MS.gene054708:CDS 40.0%
GGGGTTTGATTCCTTACAAT+AGG - chr5.3:32739880-32739899 MS.gene054708:CDS 40.0%
GTAATAACCTTCCCTTTCCA+TGG + chr5.3:32740230-32740249 None:intergenic 40.0%
GTATCAGAAACTAGTTGTGC+TGG - chr5.3:32740706-32740725 MS.gene054708:CDS 40.0%
GTTCCTCACAAACTTTGTCT+TGG + chr5.3:32740303-32740322 None:intergenic 40.0%
GTTTGATCGCATATTGGATG+TGG - chr5.3:32740358-32740377 MS.gene054708:CDS 40.0%
GTTTGTGAGGAACATGGATT+GGG - chr5.3:32740310-32740329 MS.gene054708:CDS 40.0%
TATTGGATGTGGCTGTCAAT+GGG - chr5.3:32740369-32740388 MS.gene054708:CDS 40.0%
TCGTTTGAGGAAAGATGTGT+TGG - chr5.3:32739803-32739822 MS.gene054708:CDS 40.0%
TGGAAGAAGAAATCGAGACA+AGG + chr5.3:32738970-32738989 None:intergenic 40.0%
TTACAATAGGGTTGCTTCTG+TGG - chr5.3:32739893-32739912 MS.gene054708:CDS 40.0%
TTAGCACCAATAAACACCTC+AGG + chr5.3:32739855-32739874 None:intergenic 40.0%
! ATGTTTTCAGTCAACCCCAT+CGG + chr5.3:32738919-32738938 None:intergenic 40.0%
! CAACTAGTTTCTGATACTCG+GGG + chr5.3:32740703-32740722 None:intergenic 40.0%
! CCTAGTGATTGCTTGGTAAT+CGG + chr5.3:32740480-32740499 None:intergenic 40.0%
! TGAAGGAACATTGGTAGCTA+GGG + chr5.3:32739172-32739191 None:intergenic 40.0%
! TGTTGTAGTTCTTGTTGTGG+TGG + chr5.3:32739374-32739393 None:intergenic 40.0%
! TTTGTGAGGAACATGGATTG+GGG - chr5.3:32740311-32740330 MS.gene054708:CDS 40.0%
!! AAGGAGTATCAGGAACAACA+TGG + chr5.3:32738990-32739009 None:intergenic 40.0%
!! ACATTGGTAGCTAGGGTTTT+AGG + chr5.3:32739165-32739184 None:intergenic 40.0%
!! AGCAGCAAGACTGATTTTTG+TGG + chr5.3:32739652-32739671 None:intergenic 40.0%
!! ATGCTTTGAAGGAAGAGAAG+AGG - chr5.3:32739496-32739515 MS.gene054708:CDS 40.0%
!! CATTGGTAGCTAGGGTTTTA+GGG + chr5.3:32739164-32739183 None:intergenic 40.0%
!! CGTTGATGATTTGCTCAAGA+AGG - chr5.3:32740094-32740113 MS.gene054708:CDS 40.0%
!! GAAGGTGTTTGATCGCATAT+TGG - chr5.3:32740352-32740371 MS.gene054708:CDS 40.0%
!! GATGAACACTGATTTCCAGA+AGG - chr5.3:32740334-32740353 MS.gene054708:CDS 40.0%
!! GCAGCAAGACTGATTTTTGT+GGG + chr5.3:32739651-32739670 None:intergenic 40.0%
!!! CTGTGCCTCAGATAGTTTTT+TGG - chr5.3:32740528-32740547 MS.gene054708:CDS 40.0%
!!! TCAACCCCTTTTTTAAGGAG+AGG - chr5.3:32739327-32739346 MS.gene054708:CDS 40.0%
AACCTTCGAGAAGACGATAG+AGG + chr5.3:32739233-32739252 None:intergenic 45.0%
AACGAGAGTTAAGGCTCAGA+AGG - chr5.3:32739464-32739483 MS.gene054708:CDS 45.0%
AACGCAGAAAGAAGAGTGGA+TGG - chr5.3:32739266-32739285 MS.gene054708:CDS 45.0%
AACTCCAACACCTTCCTCAA+CGG + chr5.3:32739831-32739850 None:intergenic 45.0%
AATGCTACACACACCTCCAT+AGG + chr5.3:32740176-32740195 None:intergenic 45.0%
ACGTCAAGGATAACAAAGGG+TGG - chr5.3:32739400-32739419 MS.gene054708:CDS 45.0%
AGAAGACGATAGAGGATCTC+AGG + chr5.3:32739225-32739244 None:intergenic 45.0%
AGACTCCATCGTGACTAAAG+AGG - chr5.3:32739437-32739456 MS.gene054708:CDS 45.0%
ATAGGGTTCGTGATCGTTTG+AGG - chr5.3:32739790-32739809 MS.gene054708:CDS 45.0%
ATCAAGCGTCTGCAAACTCT+TGG - chr5.3:32740450-32740469 MS.gene054708:CDS 45.0%
ATCCTCTATCGTCTTCTCGA+AGG - chr5.3:32739228-32739247 MS.gene054708:CDS 45.0%
ATCGACGAAGACATCGTTAG+TGG + chr5.3:32738851-32738870 None:intergenic 45.0%
ATGCTACACACACCTCCATA+GGG + chr5.3:32740175-32740194 None:intergenic 45.0%
CAAAGGAAGAGTCAACGGAA+GGG + chr5.3:32739683-32739702 None:intergenic 45.0%
CAAGGATAACAAAGGGTGGA+AGG - chr5.3:32739404-32739423 MS.gene054708:CDS 45.0%
CCGATCAAAGGAAGAGTCAA+CGG + chr5.3:32739688-32739707 None:intergenic 45.0%
CCGATTACCAAGCAATCACT+AGG - chr5.3:32740477-32740496 MS.gene054708:CDS 45.0%
CCTCAGCTTCATGTGATTGA+GGG - chr5.3:32740263-32740282 MS.gene054708:CDS 45.0%
CGATGTCTTCGTCGATCAAA+TGG - chr5.3:32738855-32738874 MS.gene054708:CDS 45.0%
CTACAACAACAAGGACGTCA+AGG - chr5.3:32739386-32739405 MS.gene054708:CDS 45.0%
CTCAGCTTCATGTGATTGAG+GGG - chr5.3:32740264-32740283 MS.gene054708:CDS 45.0%
CTGAATTGAACGAGGAACCA+TGG - chr5.3:32740210-32740229 MS.gene054708:CDS 45.0%
GAAGACATCGTTAGTGGTTG+TGG + chr5.3:32738845-32738864 None:intergenic 45.0%
GAAGACGATAGAGGATCTCA+GGG + chr5.3:32739224-32739243 None:intergenic 45.0%
GAGGTTACAGACGAGTTTGA+GGG + chr5.3:32739067-32739086 None:intergenic 45.0%
GAGTGGATGGAAAGGAAATC+TGG - chr5.3:32739279-32739298 MS.gene054708:CDS 45.0%
GCAAAACGCAGAAAGAAGAG+TGG - chr5.3:32739262-32739281 MS.gene054708:CDS 45.0%
GGAAACTGCTCATGCTTTGA+AGG - chr5.3:32739485-32739504 MS.gene054708:CDS 45.0%
GTTAGCGAGTGAAGGAACAT+TGG + chr5.3:32739181-32739200 None:intergenic 45.0%
GTTCCTTCACTCGCTAACTT+TGG - chr5.3:32739183-32739202 MS.gene054708:CDS 45.0%
TAGCCAAAGTTAGCGAGTGA+AGG + chr5.3:32739189-32739208 None:intergenic 45.0%
TATAAGCCCTGTAGAAGCCA+TGG - chr5.3:32740661-32740680 MS.gene054708:CDS 45.0%
TATGTGAGACCATTGCCAAG+AGG - chr5.3:32739718-32739737 MS.gene054708:CDS 45.0%
TCAAAGGAAGAGTCAACGGA+AGG + chr5.3:32739684-32739703 None:intergenic 45.0%
TCAAGCGTCTGCAAACTCTT+GGG - chr5.3:32740451-32740470 MS.gene054708:CDS 45.0%
TCAGCTTCATGTGATTGAGG+GGG - chr5.3:32740265-32740284 MS.gene054708:CDS 45.0%
TGAACGAGGAACCATGGAAA+GGG - chr5.3:32740216-32740235 MS.gene054708:CDS 45.0%
TGCTCAAGAAGGGAAAGATG+AGG - chr5.3:32740105-32740124 MS.gene054708:CDS 45.0%
TGTAGAGTGTAGATCTCAGG+TGG + chr5.3:32738790-32738809 None:intergenic 45.0%
TGTCAATGGGAATCTCAAGG+AGG - chr5.3:32740382-32740401 MS.gene054708:CDS 45.0%
TTACCAGTGGAGAGAAACGT+TGG + chr5.3:32738946-32738965 None:intergenic 45.0%
TTGAACGAGGAACCATGGAA+AGG - chr5.3:32740215-32740234 MS.gene054708:CDS 45.0%
TTGCTGTGTGTGATGTGTCT+GGG - chr5.3:32740135-32740154 MS.gene054708:CDS 45.0%
TTGGAATCTGAGAGACTCGA+AGG - chr5.3:32740547-32740566 MS.gene054708:CDS 45.0%
! AGGAGGCGCATTATGCTTAT+AGG - chr5.3:32739772-32739791 MS.gene054708:CDS 45.0%
! ATGGAGGTGTGTGTAGCATT+GGG - chr5.3:32740176-32740195 MS.gene054708:CDS 45.0%
! ATGTGTCTGGGAGTATGCAT+GGG - chr5.3:32740147-32740166 MS.gene054708:CDS 45.0%
! GAAGTACTTGGAGGATGTGA+AGG - chr5.3:32739968-32739987 MS.gene054708:CDS 45.0%
! GAGTTGCCTGAGGTGTTTAT+TGG - chr5.3:32739846-32739865 MS.gene054708:CDS 45.0%
! GGAGGCGCATTATGCTTATA+GGG - chr5.3:32739773-32739792 MS.gene054708:CDS 45.0%
! GTGAAGGAACATTGGTAGCT+AGG + chr5.3:32739173-32739192 None:intergenic 45.0%
! GTTGGTGTCTGAATTGAACG+AGG - chr5.3:32740202-32740221 MS.gene054708:CDS 45.0%
! TATGGAGGTGTGTGTAGCAT+TGG - chr5.3:32740175-32740194 MS.gene054708:CDS 45.0%
!! AGTGTCTCAGAAGGAGTATC+AGG + chr5.3:32739000-32739019 None:intergenic 45.0%
!! CCGTTGACTCTTCCTTTGAT+CGG - chr5.3:32739685-32739704 MS.gene054708:CDS 45.0%
!! GAGGTTTGAGAAGTACTTGG+AGG - chr5.3:32739959-32739978 MS.gene054708:CDS 45.0%
!! GGAGAGGTTTGAGAAGTACT+TGG - chr5.3:32739956-32739975 MS.gene054708:CDS 45.0%
!! TAACAGCGTTGACCGATCAA+AGG + chr5.3:32739700-32739719 None:intergenic 45.0%
!! TTGTGAGGAACATGGATTGG+GGG - chr5.3:32740312-32740331 MS.gene054708:CDS 45.0%
AAACTCGTCTGTAACCTCCG+TGG - chr5.3:32739069-32739088 MS.gene054708:CDS 50.0%
ACACCTTCATATTCCTCCCG+AGG + chr5.3:32739750-32739769 None:intergenic 50.0%
ACCGGCAAGTCCAACAAAGA+AGG - chr5.3:32739102-32739121 MS.gene054708:CDS 50.0%
ACTTGGAGGATGTGAAGGCA+GGG - chr5.3:32739973-32739992 MS.gene054708:CDS 50.0%
AGAAACCGAAACCCACCGAT+GGG - chr5.3:32738901-32738920 MS.gene054708:CDS 50.0%
AGAGGTGGCAACGAGAGTTA+AGG - chr5.3:32739455-32739474 MS.gene054708:CDS 50.0%
AGGGAAGATCCTCTTGGCAA+TGG + chr5.3:32739730-32739749 None:intergenic 50.0%
ATCGAGACAAGGGTTACCAG+TGG + chr5.3:32738959-32738978 None:intergenic 50.0%
ATCGTTAGTGGTTGTGGTGG+TGG + chr5.3:32738839-32738858 None:intergenic 50.0%
CACCTTCATATTCCTCCCGA+GGG + chr5.3:32739749-32739768 None:intergenic 50.0%
CAGCTTCCATGGCTTCTACA+GGG + chr5.3:32740670-32740689 None:intergenic 50.0%
CCCTCAATCACATGAAGCTG+AGG + chr5.3:32740266-32740285 None:intergenic 50.0%
CTCCATCGTGACTAAAGAGG+TGG - chr5.3:32739440-32739459 MS.gene054708:CDS 50.0%
GACATCGTTAGTGGTTGTGG+TGG + chr5.3:32738842-32738861 None:intergenic 50.0%
GCCTCAGCTTCATGTGATTG+AGG - chr5.3:32740262-32740281 MS.gene054708:CDS 50.0%
GCCTTCTTTGTTGGACTTGC+CGG + chr5.3:32739106-32739125 None:intergenic 50.0%
GGAAGAGAAGAGGATTGCCT+TGG - chr5.3:32739506-32739525 MS.gene054708:CDS 50.0%
GGAGGTTACAGACGAGTTTG+AGG + chr5.3:32739068-32739087 None:intergenic 50.0%
GGCTGTCAATGGGAATCTCA+AGG - chr5.3:32740379-32740398 MS.gene054708:CDS 50.0%
GGGAAGACTACTATTGCTGC+TGG - chr5.3:32739993-32740012 MS.gene054708:CDS 50.0%
GTTACAGACGAGTTTGAGGG+CGG + chr5.3:32739064-32739083 None:intergenic 50.0%
TACTTGGAGGATGTGAAGGC+AGG - chr5.3:32739972-32739991 MS.gene054708:CDS 50.0%
TAGAAACCGAAACCCACCGA+TGG - chr5.3:32738900-32738919 MS.gene054708:CDS 50.0%
TCACCAACGTTTCTCTCCAC+TGG - chr5.3:32738940-32738959 MS.gene054708:CDS 50.0%
TCGAGAGGCTCAAACTAGCT+TGG - chr5.3:32739022-32739041 MS.gene054708:CDS 50.0%
TCGGGAGGAATATGAAGGTG+TGG - chr5.3:32739749-32739768 MS.gene054708:CDS 50.0%
TGCCACCTCTTTAGTCACGA+TGG + chr5.3:32739445-32739464 None:intergenic 50.0%
TGCTACACACACCTCCATAG+GGG + chr5.3:32740174-32740193 None:intergenic 50.0%
TTCCCTCGGGAGGAATATGA+AGG - chr5.3:32739744-32739763 MS.gene054708:CDS 50.0%
TTGCCAAGAGGATCTTCCCT+CGG - chr5.3:32739730-32739749 MS.gene054708:CDS 50.0%
TTTCAGTCAACCCCATCGGT+GGG + chr5.3:32738915-32738934 None:intergenic 50.0%
! CTTGCTGTGTGTGATGTGTC+TGG - chr5.3:32740134-32740153 MS.gene054708:CDS 50.0%
! GAGTCTTTGCGTGATGGAGA+TGG - chr5.3:32740041-32740060 MS.gene054708:CDS 50.0%
! GATGTGTCTGGGAGTATGCA+TGG - chr5.3:32740146-32740165 MS.gene054708:CDS 50.0%
! GGAATATGAAGGTGTGGAGG+AGG - chr5.3:32739755-32739774 MS.gene054708:CDS 50.0%
! GGAGGAATATGAAGGTGTGG+AGG - chr5.3:32739752-32739771 MS.gene054708:CDS 50.0%
! GTGTGTAGCATTGGGGTTGT+TGG - chr5.3:32740184-32740203 MS.gene054708:CDS 50.0%
! TGGAGGTGTGTGTAGCATTG+GGG - chr5.3:32740177-32740196 MS.gene054708:CDS 50.0%
! TTTTCAGTCAACCCCATCGG+TGG + chr5.3:32738916-32738935 None:intergenic 50.0%
!! AAAGGAGTGGCACTGGTAAG+TGG - chr5.3:32740593-32740612 MS.gene054708:CDS 50.0%
!! AAGATGTGTTGGTGCCGTTG+AGG - chr5.3:32739814-32739833 MS.gene054708:CDS 50.0%
AGGTGGACCAACGAGAGTGA+CGG + chr5.3:32738773-32738792 None:intergenic 55.0%
CACTCAGAAAGGAGTGGCAC+TGG - chr5.3:32740586-32740605 MS.gene054708:CDS 55.0%
CCTTTCTGAGTGGATGGCAC+CGG + chr5.3:32740578-32740597 None:intergenic 55.0%
CGAGGAACCATGGAAAGGGA+AGG - chr5.3:32740220-32740239 MS.gene054708:CDS 55.0%
CTCTCGACGAGTGTCTCAGA+AGG + chr5.3:32739009-32739028 None:intergenic 55.0%
CTTTCTGAGTGGATGGCACC+GGG + chr5.3:32740577-32740596 None:intergenic 55.0%
GAAACCGAAACCCACCGATG+GGG - chr5.3:32738902-32738921 MS.gene054708:CDS 55.0%
GAGTATGCATGGGACCCCTA+TGG - chr5.3:32740157-32740176 MS.gene054708:CDS 55.0%
GCAGCTTCCATGGCTTCTAC+AGG + chr5.3:32740671-32740690 None:intergenic 55.0%
GCCACTCCTTTCTGAGTGGA+TGG + chr5.3:32740584-32740603 None:intergenic 55.0%
GCCATCCACTCAGAAAGGAG+TGG - chr5.3:32740580-32740599 MS.gene054708:CDS 55.0%
GCTTCTATGCTGCCGCTCTA+TGG - chr5.3:32739124-32739143 MS.gene054708:CDS 55.0%
GTGAAGTGGCTGAGTTGCAG+TGG - chr5.3:32740063-32740082 MS.gene054708:CDS 55.0%
TATGCATGGGACCCCTATGG+AGG - chr5.3:32740160-32740179 MS.gene054708:CDS 55.0%
TGCCAAGAGGATCTTCCCTC+GGG - chr5.3:32739731-32739750 MS.gene054708:CDS 55.0%
TGTAACCTCCGTGGTGTTCG+TGG - chr5.3:32739078-32739097 MS.gene054708:CDS 55.0%
TTTCTGAGTGGATGGCACCG+GGG + chr5.3:32740576-32740595 None:intergenic 55.0%
! CAGTGCCACTCCTTTCTGAG+TGG + chr5.3:32740588-32740607 None:intergenic 55.0%
! GCGTGATGGAGATGGTGAAG+TGG - chr5.3:32740049-32740068 MS.gene054708:CDS 55.0%
! TCAACCCCATCGGTGGGTTT+CGG + chr5.3:32738909-32738928 None:intergenic 55.0%
!! CTTCTGAGACACTCGTCGAG+AGG - chr5.3:32739007-32739026 MS.gene054708:CDS 55.0%
!! GAAGGTGTTGGAGTTGCCTG+AGG - chr5.3:32739836-32739855 MS.gene054708:CDS 55.0%
!! GTTAGTGGTTGTGGTGGTGG+TGG + chr5.3:32738836-32738855 None:intergenic 55.0%
!! TGGTGGTGGTGGTAGGGTTA+GGG + chr5.3:32738819-32738838 None:intergenic 55.0%
!! TGTGTTGGTGCCGTTGAGGA+AGG - chr5.3:32739818-32739837 MS.gene054708:CDS 55.0%
CAAGAGGATCTTCCCTCGGG+AGG - chr5.3:32739734-32739753 MS.gene054708:CDS 60.0%
CTCCCGAGGGAAGATCCTCT+TGG + chr5.3:32739736-32739755 None:intergenic 60.0%
CTCCGTGGTGTTCGTGGTAC+CGG - chr5.3:32739084-32739103 MS.gene054708:CDS 60.0%
TGCCGGTACCACGAACACCA+CGG + chr5.3:32739089-32739108 None:intergenic 60.0%
TGGACCAACGAGAGTGACGG+CGG + chr5.3:32738770-32738789 None:intergenic 60.0%
!! AGTGGTTGTGGTGGTGGTGG+TGG + chr5.3:32738833-32738852 None:intergenic 60.0%
!! CCGGTGCCATCCACTCAGAA+AGG - chr5.3:32740575-32740594 MS.gene054708:CDS 60.0%
!! GGTGCCGTTGAGGAAGGTGT+TGG - chr5.3:32739824-32739843 MS.gene054708:CDS 60.0%
!! GTGGTGGTGGTGGTAGGGTT+AGG + chr5.3:32738820-32738839 None:intergenic 60.0%
!! TGGTGGTGGTGGTGGTGGTA+GGG + chr5.3:32738825-32738844 None:intergenic 60.0%
ATGGCCGCCGTCACTCTCGT+TGG - chr5.3:32738763-32738782 MS.gene054708:CDS 65.0%
CGGTACCACGAACACCACGG+AGG + chr5.3:32739086-32739105 None:intergenic 65.0%
CTGATACTCGGGGCCAGCGA+TGG + chr5.3:32740693-32740712 None:intergenic 65.0%
GAGAGACTCGAAGGCCACCC+CGG - chr5.3:32740556-32740575 MS.gene054708:CDS 65.0%
GCCAGCGATGGCAGCTTCCA+TGG + chr5.3:32740681-32740700 None:intergenic 65.0%
GCCATGGAAGCTGCCATCGC+TGG - chr5.3:32740677-32740696 MS.gene054708:CDS 65.0%
!! GGTTGTGGTGGTGGTGGTGG+TGG + chr5.3:32738830-32738849 None:intergenic 65.0%
!! GTGGTGGTGGTGGTGGTGGT+AGG + chr5.3:32738826-32738845 None:intergenic 65.0%
! CTGAGTGGATGGCACCGGGG+TGG + chr5.3:32740573-32740592 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr5.3 gene 32738763 32740733 32738763 ID=MS.gene054708
chr5.3 mRNA 32738763 32740733 32738763 ID=MS.gene054708.t1;Parent=MS.gene054708
chr5.3 exon 32738763 32740733 32738763 ID=MS.gene054708.t1.exon1;Parent=MS.gene054708.t1
chr5.3 CDS 32738763 32740733 32738763 ID=cds.MS.gene054708.t1;Parent=MS.gene054708.t1
Gene Sequence

>MS.gene054708

ATGGCCGCCGTCACTCTCGTTGGTCCACCTGAGATCTACACTCTACAATCAAACCCTAACCCTACCACCACCACCACCACCACAACCACTAACGATGTCTTCGTCGATCAAATGGTAGCCAACTTCAATTCTTTTGCTAGAAACCGAAACCCACCGATGGGGTTGACTGAAAACATGTCACCAACGTTTCTCTCCACTGGTAACCCTTGTCTCGATTTCTTCTTCCATGTTGTTCCTGATACTCCTTCTGAGACACTCGTCGAGAGGCTCAAACTAGCTTGGTCACACAACTCACTCACCGCCCTCAAACTCGTCTGTAACCTCCGTGGTGTTCGTGGTACCGGCAAGTCCAACAAAGAAGGCTTCTATGCTGCCGCTCTATGGTTTCATGAAAATCACCCTAAAACCCTAGCTACCAATGTTCCTTCACTCGCTAACTTTGGCTACTTCAAAGATCTCCCTGAGATCCTCTATCGTCTTCTCGAAGGTTCTGAAGTTCGCAAAACGCAGAAAGAAGAGTGGATGGAAAGGAAATCTGGATCCAAAAGGAAATCTTCATCTTCATCAACCCCTTTTTTAAGGAGAGGAATAAACAAAAAACAACGACACCACCACAACAAGAACTACAACAACAAGGACGTCAAGGATAACAAAGGGTGGAAGGGTACTGAGAAAGACTCCATCGTGACTAAAGAGGTGGCAACGAGAGTTAAGGCTCAGAAGGAAACTGCTCATGCTTTGAAGGAAGAGAAGAGGATTGCCTTGGCTAAAAAGCTTGTTGATCGTTACACTACTGATCCCAATTTCAAGTTTCTTCATGATTGTATCTCTGATCATTTTGCTGATTGTTTGAAGAAGGATCTCGAGTTTTTGAAATCTGGGTCGCCCACAAAAATCAGTCTTGCTGCTAAATGGTGCCCTTCCGTTGACTCTTCCTTTGATCGGTCAACGCTGTTATGTGAGACCATTGCCAAGAGGATCTTCCCTCGGGAGGAATATGAAGGTGTGGAGGAGGCGCATTATGCTTATAGGGTTCGTGATCGTTTGAGGAAAGATGTGTTGGTGCCGTTGAGGAAGGTGTTGGAGTTGCCTGAGGTGTTTATTGGTGCTAATCAATGGGGTTTGATTCCTTACAATAGGGTTGCTTCTGTGGCCATGAAGTTTTATAAGGAGAAGTTTTTGAAGCATGATAAGGAGAGGTTTGAGAAGTACTTGGAGGATGTGAAGGCAGGGAAGACTACTATTGCTGCTGGTGCTTTGCTTCCTCACGAGATTATAGAGTCTTTGCGTGATGGAGATGGTGAAGTGGCTGAGTTGCAGTGGAAGAGAATCGTTGATGATTTGCTCAAGAAGGGAAAGATGAGGAATTGTCTTGCTGTGTGTGATGTGTCTGGGAGTATGCATGGGACCCCTATGGAGGTGTGTGTAGCATTGGGGTTGTTGGTGTCTGAATTGAACGAGGAACCATGGAAAGGGAAGGTTATTACTTTCAGCAGGAAGCCTCAGCTTCATGTGATTGAGGGGGATGATCTGAAGTCCAAGACAAAGTTTGTGAGGAACATGGATTGGGGGATGAACACTGATTTCCAGAAGGTGTTTGATCGCATATTGGATGTGGCTGTCAATGGGAATCTCAAGGAGGATCAGATGATTAAGAGGATCTTTGTCTTTAGTGACATGGAGTTTGATCAAGCGTCTGCAAACTCTTGGGAGACCGATTACCAAGCAATCACTAGGAAGTATAGAAAGAAAGGGTATGGTTCTGCTGTGCCTCAGATAGTTTTTTGGAATCTGAGAGACTCGAAGGCCACCCCGGTGCCATCCACTCAGAAAGGAGTGGCACTGGTAAGTGGTTTTTCGAAGAATCTGCTGACATTGTTCTTGGATAATGAAGGTGATATAAGCCCTGTAGAAGCCATGGAAGCTGCCATCGCTGGCCCCGAGTATCAGAAACTAGTTGTGCTGGATTGA

Protein sequence

>MS.gene054708.t1

MAAVTLVGPPEIYTLQSNPNPTTTTTTTTTNDVFVDQMVANFNSFARNRNPPMGLTENMSPTFLSTGNPCLDFFFHVVPDTPSETLVERLKLAWSHNSLTALKLVCNLRGVRGTGKSNKEGFYAAALWFHENHPKTLATNVPSLANFGYFKDLPEILYRLLEGSEVRKTQKEEWMERKSGSKRKSSSSSTPFLRRGINKKQRHHHNKNYNNKDVKDNKGWKGTEKDSIVTKEVATRVKAQKETAHALKEEKRIALAKKLVDRYTTDPNFKFLHDCISDHFADCLKKDLEFLKSGSPTKISLAAKWCPSVDSSFDRSTLLCETIAKRIFPREEYEGVEEAHYAYRVRDRLRKDVLVPLRKVLELPEVFIGANQWGLIPYNRVASVAMKFYKEKFLKHDKERFEKYLEDVKAGKTTIAAGALLPHEIIESLRDGDGEVAELQWKRIVDDLLKKGKMRNCLAVCDVSGSMHGTPMEVCVALGLLVSELNEEPWKGKVITFSRKPQLHVIEGDDLKSKTKFVRNMDWGMNTDFQKVFDRILDVAVNGNLKEDQMIKRIFVFSDMEFDQASANSWETDYQAITRKYRKKGYGSAVPQIVFWNLRDSKATPVPSTQKGVALVSGFSKNLLTLFLDNEGDISPVEAMEAAIAGPEYQKLVVLD