AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene052566


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene052566.t1 MTR_4g091370 97.949 390 8 0 1 390 1 390 0.0 773
MS.gene052566.t1 MTR_4g090600 84.103 390 62 0 1 390 1 390 0.0 659
MS.gene052566.t1 MTR_3g093010 66.832 404 123 4 1 394 1 403 0.0 529
MS.gene052566.t1 MTR_5g041550 66.496 391 130 1 1 390 1 391 0.0 528
MS.gene052566.t1 MTR_0009s0370 63.517 381 138 1 11 390 9 389 7.56e-177 503
MS.gene052566.t1 MTR_5g082540 64.578 367 127 2 13 378 13 377 2.06e-173 494
MS.gene052566.t1 MTR_1g038630 63.852 379 134 2 1 378 1 377 6.76e-172 490
MS.gene052566.t1 MTR_3g023480 61.640 378 144 1 14 390 12 389 1.78e-171 489
MS.gene052566.t1 MTR_3g007910 61.042 403 116 5 1 394 1 371 3.92e-165 472
MS.gene052566.t1 MTR_1g038600 60.422 379 129 3 1 378 1 359 7.93e-156 449
MS.gene052566.t1 MTR_3g093060 62.099 343 128 1 50 390 1 343 3.79e-155 446
MS.gene052566.t1 MTR_5g006070 60.556 360 141 1 14 372 13 372 4.99e-153 442
MS.gene052566.t1 MTR_3g008160 55.025 398 178 1 1 397 1 398 2.17e-152 440
MS.gene052566.t1 MTR_1g104770 55.496 373 165 1 1 372 1 373 3.56e-149 432
MS.gene052566.t1 MTR_1g104750 53.763 372 172 0 1 372 1 372 3.11e-148 429
MS.gene052566.t1 MTR_1g104780 57.909 373 155 2 1 372 1 372 1.32e-146 426
MS.gene052566.t1 MTR_5g094760 56.349 378 159 3 1 374 1 376 1.28e-145 423
MS.gene052566.t1 MTR_7g091690 56.349 378 159 3 1 374 1 376 8.48e-145 421
MS.gene052566.t1 MTR_0204s0020 54.848 361 161 2 14 374 12 370 3.20e-142 414
MS.gene052566.t1 MTR_0204s0020 54.017 361 161 3 14 374 12 367 3.95e-138 403
MS.gene052566.t1 MTR_0204s0040 51.309 382 178 4 1 376 1 380 9.56e-137 400
MS.gene052566.t1 MTR_4g116790 51.344 372 179 2 3 374 7 376 3.11e-136 400
MS.gene052566.t1 MTR_4g116790 51.524 361 173 2 3 363 7 365 3.21e-136 395
MS.gene052566.t1 MTR_6g087040 53.704 378 170 3 1 374 1 377 3.36e-136 399
MS.gene052566.t1 MTR_6g088375 53.704 378 170 3 1 374 1 377 3.36e-136 399
MS.gene052566.t1 MTR_3g008170 52.577 388 182 2 12 397 12 399 2.59e-135 397
MS.gene052566.t1 MTR_4g116770 51.309 382 178 4 1 376 197 576 4.82e-134 400
MS.gene052566.t1 MTR_5g006070 60.185 324 128 1 50 372 1 324 1.80e-133 391
MS.gene052566.t1 MTR_3g074270 53.034 379 174 3 1 378 1 376 7.95e-133 390
MS.gene052566.t1 MTR_3g008160 54.728 349 157 1 50 397 1 349 6.84e-132 386
MS.gene052566.t1 MTR_8g102860 51.247 361 174 2 15 374 18 377 2.55e-127 377
MS.gene052566.t1 MTR_3g074380 52.571 350 161 4 17 364 20 366 4.21e-127 371
MS.gene052566.t1 MTR_3g074390 51.374 364 172 4 17 378 22 382 7.36e-127 375
MS.gene052566.t1 MTR_3g074410 50.649 385 177 6 1 378 1 379 4.62e-126 373
MS.gene052566.t1 MTR_8g102860 50.920 326 158 2 50 374 1 325 2.36e-111 334
MS.gene052566.t1 MTR_5g096000 66.848 184 41 3 1 184 1 164 2.48e-69 221
MS.gene052566.t1 MTR_3g074400 43.151 292 149 6 50 338 1 278 2.87e-69 224
MS.gene052566.t1 MTR_0064s0040 71.053 152 32 1 2 153 3 142 6.25e-69 214
MS.gene052566.t1 MTR_3g074370 46.561 189 99 2 192 378 22 210 2.90e-53 180
MS.gene052566.t1 MTR_3g074320 46.561 189 99 2 192 378 22 210 3.39e-53 180
MS.gene052566.t1 MTR_3g074340 46.561 189 99 2 192 378 22 210 3.58e-53 180
MS.gene052566.t1 MTR_1g038620 55.696 158 53 1 204 361 50 190 3.19e-51 170
MS.gene052566.t1 MTR_3g074310 56.604 159 61 2 1 152 1 158 9.25e-50 166
MS.gene052566.t1 MTR_3g074330 55.975 159 62 2 1 152 1 158 7.82e-49 164
MS.gene052566.t1 MTR_3g074360 55.975 159 62 2 1 152 1 158 7.82e-49 164
MS.gene052566.t1 MTR_2g048720 34.125 337 197 6 21 352 24 340 3.56e-47 169
MS.gene052566.t1 MTR_2g049020 31.563 339 206 5 21 352 24 343 5.30e-43 158
MS.gene052566.t1 MTR_7g082270 28.962 366 226 8 17 376 63 400 1.48e-41 152
MS.gene052566.t1 MTR_6g018790 29.661 354 209 8 11 352 87 412 2.01e-41 153
MS.gene052566.t1 MTR_7g005910 28.982 383 244 8 12 389 22 381 2.04e-41 152
MS.gene052566.t1 MTR_4g069500 27.424 361 224 5 27 369 34 374 2.40e-41 153
MS.gene052566.t1 MTR_7g082270 28.962 366 226 8 17 376 63 400 2.99e-41 152
MS.gene052566.t1 MTR_3g084110 29.508 366 230 8 21 381 26 368 1.60e-40 150
MS.gene052566.t1 MTR_6g088450 27.966 354 222 7 18 360 53 384 3.02e-40 150
MS.gene052566.t1 MTR_4g069500 29.492 295 190 3 93 369 30 324 7.38e-39 145
MS.gene052566.t1 MTR_8g077890 31.215 362 208 10 11 351 6 347 1.95e-38 144
MS.gene052566.t1 MTR_1g116660 28.418 373 242 8 21 389 33 384 2.01e-38 144
MS.gene052566.t1 MTR_2g026160 28.448 348 210 7 20 352 24 347 5.98e-38 144
MS.gene052566.t1 MTR_4g072030 27.838 370 220 7 22 369 26 370 9.63e-38 143
MS.gene052566.t1 MTR_1g116650 28.877 374 226 9 21 389 76 414 1.71e-37 142
MS.gene052566.t1 MTR_3g116240 26.190 378 239 6 12 369 17 374 2.34e-37 142
MS.gene052566.t1 MTR_5g075300 29.178 353 210 9 28 360 24 356 2.55e-36 139
MS.gene052566.t1 MTR_5g077580 29.630 378 191 10 21 352 24 372 2.54e-35 137
MS.gene052566.t1 MTR_2g013310 28.413 271 186 4 89 351 26 296 4.06e-33 129
MS.gene052566.t1 MTR_2g013310 25.664 339 222 7 22 351 52 369 6.77e-33 129
MS.gene052566.t1 MTR_7g113970 29.851 335 201 7 21 352 60 363 9.45e-33 127
MS.gene052566.t1 MTR_7g113970 29.851 335 201 7 21 352 60 363 1.46e-32 128
MS.gene052566.t1 MTR_8g103500 25.549 364 238 6 10 361 5 347 1.50e-32 128
MS.gene052566.t1 MTR_4g077740 29.565 345 212 8 31 360 53 381 2.27e-32 127
MS.gene052566.t1 MTR_7g446340 26.050 357 235 7 14 361 45 381 9.55e-32 126
MS.gene052566.t1 MTR_6g007340 26.050 357 235 7 14 361 45 381 9.55e-32 126
MS.gene052566.t1 MTR_1g022315 28.671 286 193 4 83 366 89 365 1.30e-31 125
MS.gene052566.t1 MTR_8g077300 29.060 351 214 9 22 368 38 357 3.13e-31 124
MS.gene052566.t1 MTR_1g022315 28.470 281 190 4 94 372 1 272 3.73e-31 122
MS.gene052566.t1 MTR_4g064820 28.729 362 226 7 23 367 96 442 7.19e-31 123
MS.gene052566.t1 MTR_7g113960 30.515 272 177 4 83 352 67 328 2.37e-30 120
MS.gene052566.t1 MTR_7g113960 30.515 272 177 4 83 352 67 328 3.87e-30 121
MS.gene052566.t1 MTR_8g077310 25.862 348 227 6 23 368 47 365 8.03e-29 116
MS.gene052566.t1 MTR_8g077310 25.575 348 228 6 23 368 47 365 1.10e-28 117
MS.gene052566.t1 MTR_5g019870 26.910 301 195 5 92 369 64 362 2.18e-28 116
MS.gene052566.t1 MTR_8g077310 27.798 277 189 4 94 368 1 268 1.54e-27 112
MS.gene052566.t1 MTR_2g026140 26.706 337 200 8 29 352 30 332 2.61e-27 114
MS.gene052566.t1 MTR_5g020270 27.338 278 191 4 83 358 90 358 8.44e-26 108
MS.gene052566.t1 MTR_3g080240 24.638 345 233 8 28 369 98 418 1.78e-25 108
MS.gene052566.t1 MTR_5g020270 27.341 267 183 4 94 358 1 258 2.83e-25 106
MS.gene052566.t1 MTR_7g094450 27.090 299 190 7 80 368 77 357 8.98e-24 103
MS.gene052566.t1 MTR_2g020710 27.899 276 178 7 82 350 88 349 1.13e-23 101
MS.gene052566.t1 MTR_2g020710 27.899 276 178 7 82 350 88 349 1.91e-23 101
MS.gene052566.t1 MTR_2g020710 27.899 276 178 7 82 350 88 349 2.31e-23 101
MS.gene052566.t1 MTR_2g020710 27.899 276 178 7 82 350 88 349 3.72e-23 101
MS.gene052566.t1 MTR_2g020710 28.102 274 176 7 84 350 1 260 5.60e-23 100
MS.gene052566.t1 MTR_7g094110 26.882 279 192 4 83 359 82 350 1.34e-21 96.7
MS.gene052566.t1 MTR_7g094110 26.882 279 192 4 83 359 82 350 1.44e-21 96.7
MS.gene052566.t1 MTR_4g118610 28.782 271 180 6 83 350 92 352 3.73e-21 95.1
MS.gene052566.t1 MTR_1g093115 69.841 63 18 1 161 222 1 63 3.82e-21 86.7
MS.gene052566.t1 MTR_6g087910 23.509 285 213 3 93 377 102 381 3.83e-21 95.5
MS.gene052566.t1 MTR_5g020270 25.641 273 185 4 83 344 90 355 6.20e-21 94.7
MS.gene052566.t1 MTR_4g118610 28.782 271 180 6 83 350 92 352 7.08e-21 94.7
MS.gene052566.t1 MTR_3g116060 31.088 193 123 4 74 259 31 220 1.78e-18 87.8
MS.gene052566.t1 MTR_4g013205 21.569 306 235 3 47 352 42 342 1.40e-17 84.7
MS.gene052566.t1 MTR_5g024740 26.383 235 151 5 23 255 4 218 4.00e-17 84.0
MS.gene052566.t1 MTR_5g044910 27.168 173 124 2 84 255 47 218 2.08e-16 81.6
MS.gene052566.t1 MTR_3g118530 32.353 170 113 2 91 259 54 222 3.01e-16 81.3
MS.gene052566.t1 MTR_3g118530 32.353 170 113 2 91 259 54 222 5.08e-16 80.5
MS.gene052566.t1 MTR_8g073100 26.446 242 142 6 23 255 4 218 1.22e-15 79.3
MS.gene052566.t1 MTR_4g069500 25.683 183 118 3 205 369 3 185 3.03e-15 76.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene052566.t1 AT1G11260 81.026 390 74 0 1 390 1 390 0.0 654
MS.gene052566.t1 AT4G21480 75.641 390 93 1 1 390 1 388 0.0 604
MS.gene052566.t1 AT5G23270 63.281 384 138 3 1 382 1 383 3.80e-169 483
MS.gene052566.t1 AT3G19940 63.342 371 132 2 19 386 21 390 3.43e-167 478
MS.gene052566.t1 AT3G19930 60.209 382 150 2 1 382 1 380 1.92e-165 474
MS.gene052566.t1 AT3G19930 60.209 382 150 2 1 382 1 380 1.92e-165 474
MS.gene052566.t1 AT1G50310 61.818 385 137 5 19 394 21 404 2.55e-165 474
MS.gene052566.t1 AT5G26340 58.556 374 152 2 1 372 1 373 9.34e-152 439
MS.gene052566.t1 AT4G02050 55.291 378 163 3 1 374 1 376 2.17e-139 407
MS.gene052566.t1 AT4G02050 55.291 378 163 3 1 374 1 376 2.17e-139 407
MS.gene052566.t1 AT5G26250 52.304 369 174 2 10 378 9 375 4.15e-136 399
MS.gene052566.t1 AT5G61520 55.432 359 152 3 17 369 18 374 3.87e-135 397
MS.gene052566.t1 AT1G77210 51.523 394 183 4 1 390 1 390 1.05e-133 393
MS.gene052566.t1 AT1G77210 51.523 394 183 4 1 390 1 390 1.05e-133 393
MS.gene052566.t1 AT3G05960 51.226 367 177 2 15 381 13 377 1.19e-131 387
MS.gene052566.t1 AT1G07340 51.323 378 180 3 1 377 1 375 6.14e-129 380
MS.gene052566.t1 AT1G34580 51.421 387 173 6 1 378 1 381 3.84e-127 376
MS.gene052566.t1 AT5G61520 54.434 327 141 3 49 369 2 326 3.76e-118 352
MS.gene052566.t1 AT1G34580 50.599 334 157 4 50 378 1 331 1.64e-109 329
MS.gene052566.t1 AT1G50310 60.714 252 89 5 152 394 11 261 1.56e-98 298
MS.gene052566.t1 AT1G77210 54.018 224 101 2 152 374 6 228 9.91e-75 236
MS.gene052566.t1 AT2G16130 30.151 398 227 10 12 385 14 384 1.84e-44 161
MS.gene052566.t1 AT2G16120 29.648 398 229 10 12 385 14 384 8.07e-44 159
MS.gene052566.t1 AT4G16480 31.653 357 215 6 20 366 24 361 1.63e-43 160
MS.gene052566.t1 AT4G16480 31.653 357 215 6 20 366 24 361 1.63e-43 160
MS.gene052566.t1 AT4G16480 31.653 357 215 6 20 366 24 361 1.63e-43 160
MS.gene052566.t1 AT1G30220 31.215 362 217 9 4 352 3 345 1.66e-43 160
MS.gene052566.t1 AT2G35740 30.641 359 216 7 21 367 24 361 2.64e-43 159
MS.gene052566.t1 AT5G16150 30.205 341 212 6 12 352 98 412 9.31e-43 157
MS.gene052566.t1 AT5G16150 30.205 341 212 6 12 352 98 412 9.31e-43 157
MS.gene052566.t1 AT5G16150 30.205 341 212 6 12 352 98 412 9.31e-43 157
MS.gene052566.t1 AT4G36670 30.518 367 216 8 14 361 8 354 7.27e-41 151
MS.gene052566.t1 AT3G18830 27.901 362 222 6 27 369 40 381 1.75e-39 148
MS.gene052566.t1 AT2G18480 30.000 360 209 10 37 374 36 374 2.15e-38 144
MS.gene052566.t1 AT2G43330 28.378 370 235 8 27 389 35 381 3.49e-34 133
MS.gene052566.t1 AT1G75220 31.746 315 188 6 75 372 66 370 4.78e-34 132
MS.gene052566.t1 AT1G19450 31.646 316 187 6 75 372 67 371 8.09e-33 129
MS.gene052566.t1 AT2G20780 26.879 346 227 5 22 361 54 379 1.15e-32 129
MS.gene052566.t1 AT5G59250 30.571 350 209 8 23 354 98 431 3.92e-32 127
MS.gene052566.t1 AT2G20780 29.286 280 192 3 88 361 42 321 7.35e-32 126
MS.gene052566.t1 AT3G05155 25.474 369 238 8 13 380 17 349 1.61e-31 125
MS.gene052566.t1 AT3G05155 25.513 341 221 7 13 352 17 325 2.20e-30 119
MS.gene052566.t1 AT5G17010 28.406 345 216 7 31 360 55 383 3.87e-30 121
MS.gene052566.t1 AT5G17010 28.406 345 216 7 31 360 55 383 3.87e-30 121
MS.gene052566.t1 AT5G17010 28.406 345 216 7 31 360 55 383 3.87e-30 121
MS.gene052566.t1 AT3G03090 28.324 346 215 9 31 360 55 383 6.23e-29 118
MS.gene052566.t1 AT1G05030 26.163 344 229 7 29 370 85 405 4.14e-28 116
MS.gene052566.t1 AT1G54730 28.221 326 202 6 29 352 38 333 5.61e-28 113
MS.gene052566.t1 AT1G54730 28.221 326 202 6 29 352 38 333 7.03e-28 114
MS.gene052566.t1 AT1G54730 28.221 326 202 6 29 352 38 333 1.11e-27 114
MS.gene052566.t1 AT3G05400 24.932 365 240 9 11 372 14 347 1.15e-27 114
MS.gene052566.t1 AT1G54730 28.221 326 202 6 29 352 38 333 1.20e-27 113
MS.gene052566.t1 AT1G54730 28.221 326 202 6 29 352 38 333 1.20e-27 113
MS.gene052566.t1 AT1G05030 27.018 285 202 5 88 370 73 353 9.10e-27 111
MS.gene052566.t1 AT1G08930 28.105 306 199 7 83 384 98 386 2.11e-26 110
MS.gene052566.t1 AT1G08930 28.105 306 199 7 83 384 98 386 2.11e-26 110
MS.gene052566.t1 AT5G27360 25.895 363 229 9 12 368 24 352 1.09e-25 108
MS.gene052566.t1 AT5G27360 26.171 363 228 9 12 368 24 352 1.13e-25 108
MS.gene052566.t1 AT5G27360 26.171 363 228 9 12 368 72 400 1.76e-25 108
MS.gene052566.t1 AT1G54730 26.752 314 200 6 29 340 38 323 2.01e-25 107
MS.gene052566.t1 AT3G05160 29.097 299 190 8 65 360 51 330 2.52e-25 107
MS.gene052566.t1 AT1G54730 26.752 314 200 6 29 340 38 323 2.60e-25 107
MS.gene052566.t1 AT3G05160 29.097 299 190 8 65 360 2 281 2.95e-25 106
MS.gene052566.t1 AT3G05160 29.097 299 190 8 65 360 2 281 2.95e-25 106
MS.gene052566.t1 AT2G48020 28.866 291 182 6 83 364 68 342 3.55e-25 106
MS.gene052566.t1 AT1G54730 26.752 314 200 6 29 340 38 323 4.16e-25 105
MS.gene052566.t1 AT2G48020 29.032 279 174 5 82 352 67 329 5.07e-25 105
MS.gene052566.t1 AT1G08900 27.046 281 193 4 83 361 65 335 5.83e-25 106
MS.gene052566.t1 AT5G27350 25.326 383 251 9 12 390 20 371 6.38e-25 106
MS.gene052566.t1 AT2G48020 28.767 292 183 6 82 364 67 342 6.46e-25 106
MS.gene052566.t1 AT2G48020 28.767 292 183 6 82 364 67 342 6.46e-25 106
MS.gene052566.t1 AT1G54730 27.393 303 191 5 29 329 38 313 7.57e-25 104
MS.gene052566.t1 AT1G54730 27.393 303 191 5 29 329 38 313 7.57e-25 104
MS.gene052566.t1 AT1G08900 26.950 282 194 4 83 362 23 294 8.09e-25 105
MS.gene052566.t1 AT1G08900 26.950 282 194 4 83 362 57 328 9.26e-25 105
MS.gene052566.t1 AT1G08900 27.046 281 193 4 83 361 65 335 9.87e-25 105
MS.gene052566.t1 AT1G08900 27.046 281 193 4 83 361 65 335 9.87e-25 105
MS.gene052566.t1 AT3G05165 27.181 298 197 6 65 360 60 339 1.12e-24 105
MS.gene052566.t1 AT3G05165 27.181 298 197 6 65 360 60 339 1.12e-24 105
MS.gene052566.t1 AT3G05165 27.181 298 197 6 65 360 60 339 1.12e-24 105
MS.gene052566.t1 AT3G05165 27.402 281 192 5 82 360 69 339 1.58e-24 105
MS.gene052566.t1 AT3G05165 27.402 281 192 5 82 360 69 339 1.58e-24 105
MS.gene052566.t1 AT5G18840 28.374 289 192 7 68 352 69 346 2.66e-24 104
MS.gene052566.t1 AT3G05165 27.492 331 201 9 65 386 60 360 4.51e-24 104
MS.gene052566.t1 AT1G08890 26.950 282 194 4 83 362 67 338 6.82e-24 103
MS.gene052566.t1 AT4G04760 29.930 284 182 6 83 360 71 343 1.63e-23 102
MS.gene052566.t1 AT4G04760 29.930 284 182 6 83 360 12 284 1.98e-23 101
MS.gene052566.t1 AT3G05400 23.562 365 225 9 11 372 14 327 3.18e-23 101
MS.gene052566.t1 AT4G04750 28.374 289 191 7 83 366 76 353 3.39e-23 101
MS.gene052566.t1 AT4G04750 28.374 289 191 7 83 366 76 353 3.39e-23 101
MS.gene052566.t1 AT1G67300 23.229 353 249 8 47 393 57 393 3.50e-23 100
MS.gene052566.t1 AT1G67300 23.229 353 249 8 47 393 57 393 3.50e-23 100
MS.gene052566.t1 AT4G04750 28.374 289 191 7 83 366 120 397 4.66e-23 101
MS.gene052566.t1 AT1G67300 23.229 353 249 8 47 393 57 393 6.98e-23 100
MS.gene052566.t1 AT1G67300 23.229 353 249 8 47 393 57 393 6.98e-23 100
MS.gene052566.t1 AT1G67300 23.229 353 249 8 47 393 57 393 9.86e-23 100
MS.gene052566.t1 AT1G67300 23.229 353 249 8 47 393 57 393 9.86e-23 100
MS.gene052566.t1 AT1G67300 23.796 353 248 9 47 393 57 394 1.71e-22 99.4
MS.gene052566.t1 AT5G27360 29.008 262 166 7 113 368 1 248 3.48e-22 97.4
MS.gene052566.t1 AT5G27360 29.008 262 166 7 113 368 1 248 3.48e-22 97.4
MS.gene052566.t1 AT4G04760 29.779 272 174 6 83 348 71 331 6.43e-22 97.8
MS.gene052566.t1 AT3G05150 27.815 302 178 9 73 360 70 345 6.75e-21 94.7
MS.gene052566.t1 AT3G05150 27.815 302 178 9 73 360 70 345 6.75e-21 94.7
MS.gene052566.t1 AT1G08920 25.818 275 186 7 83 352 72 333 8.83e-21 94.4
MS.gene052566.t1 AT3G05150 27.815 302 178 9 73 360 70 345 9.07e-21 94.4
MS.gene052566.t1 AT1G08920 25.818 275 186 7 83 352 72 333 9.08e-21 94.0
MS.gene052566.t1 AT1G08920 25.818 275 186 7 83 352 72 333 1.03e-20 94.0
MS.gene052566.t1 AT3G51490 26.778 239 153 5 23 259 4 222 3.36e-20 93.2
MS.gene052566.t1 AT3G51490 26.778 239 153 5 23 259 4 222 3.64e-20 93.2
MS.gene052566.t1 AT1G79820 25.862 290 201 7 90 375 107 386 7.87e-20 91.3
MS.gene052566.t1 AT5G17010 26.966 356 194 11 31 369 52 358 9.18e-20 91.3
MS.gene052566.t1 AT1G79820 25.517 290 202 7 90 375 107 386 1.70e-19 90.5
MS.gene052566.t1 AT1G79820 25.517 290 202 7 90 375 107 386 1.70e-19 90.5
MS.gene052566.t1 AT3G51490 30.588 170 116 2 91 259 4 172 4.54e-19 89.7
MS.gene052566.t1 AT3G20460 24.468 282 199 5 82 361 92 361 8.20e-17 82.4
MS.gene052566.t1 AT4G35300 31.176 170 115 2 91 259 54 222 1.60e-16 82.0
MS.gene052566.t1 AT4G35300 31.176 170 115 2 91 259 54 222 1.60e-16 82.0
MS.gene052566.t1 AT4G35300 31.176 170 115 2 91 259 54 222 1.60e-16 82.0
MS.gene052566.t1 AT4G35300 31.176 170 115 2 91 259 54 222 1.65e-16 82.0
MS.gene052566.t1 AT4G35300 31.176 170 115 2 91 259 54 222 1.65e-16 82.0
MS.gene052566.t1 AT4G35300 31.176 170 115 2 91 259 54 222 1.65e-16 82.0
MS.gene052566.t1 AT4G35300 31.176 170 115 2 91 259 54 222 1.65e-16 82.0
MS.gene052566.t1 AT4G35300 31.176 170 115 2 91 259 54 222 1.65e-16 82.0
MS.gene052566.t1 AT4G35300 31.176 170 115 2 91 259 54 222 1.65e-16 82.0
MS.gene052566.t1 AT4G35300 31.176 170 115 2 91 259 54 222 1.65e-16 82.0
MS.gene052566.t1 AT1G20840 30.366 191 124 3 77 259 31 220 1.48e-15 79.0
MS.gene052566.t1 AT1G20840 30.366 191 124 3 77 259 31 220 1.48e-15 79.0
MS.gene052566.t1 AT1G79360 22.383 277 189 7 87 348 118 383 3.23e-11 65.5
MS.gene052566.t1 AT1G79820 26.238 202 142 4 90 290 107 302 3.85e-11 65.1

Find 119 sgRNAs with CRISPR-Local

Find 201 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTTAATTCCATTGGGTTTA+AGG 0.113122 4.3:-22653216 MS.gene052566:CDS
GCTACTTGTGTCTCAATTTA+TGG 0.126446 4.3:-22653143 MS.gene052566:CDS
TCCCCATCCACCTTTGATTT+TGG 0.146670 4.3:+22653565 None:intergenic
GCCATGGGTGGTTTGATCTT+TGG 0.171803 4.3:-22655442 MS.gene052566:CDS
GGCTACGATATTGGAATTTC+AGG 0.195679 4.3:-22655421 MS.gene052566:intron
CGGTATCGGGTTTGCTAATC+AGG 0.241591 4.3:-22654985 MS.gene052566:intron
GAGCACCACCTTCAAGAAAA+AGG 0.248083 4.3:+22653096 None:intergenic
TTGATCTTTGGCTACGATAT+TGG 0.249040 4.3:-22655430 MS.gene052566:CDS
CTTGTCGGTGCTCTTATAAA+TGG 0.257332 4.3:-22655059 MS.gene052566:CDS
GTTTACATCGTCCTTGTATC+TGG 0.267511 4.3:-22655168 MS.gene052566:CDS
TATAGAGGAGCATTGAATAT+TGG 0.274205 4.3:-22653647 MS.gene052566:CDS
GACAAAAGGAGTGAGGTTTC+CGG 0.295840 4.3:+22655486 None:intergenic
ATAGAGGAGCATTGAATATT+GGG 0.299523 4.3:-22653646 MS.gene052566:CDS
GCTGCAATTGGTGCCAAGTT+TGG 0.313954 4.3:-22652937 MS.gene052566:CDS
CCATTCTTCCAACAATTTAC+CGG 0.328002 4.3:-22653272 MS.gene052566:CDS
CCACGTTCGATCATTGAGTT+AGG 0.339334 4.3:+22653467 None:intergenic
TCTTGCTTGGATTCGGTATC+GGG 0.343600 4.3:-22654998 MS.gene052566:CDS
CCTGTGCTATTTAATTCCAT+TGG 0.361798 4.3:-22653224 MS.gene052566:CDS
ATGGGGTCCACTTGGTTGGT+TGG 0.366998 4.3:-22652824 MS.gene052566:CDS
ACAAAAGGAGTGAGGTTTCC+GGG 0.368593 4.3:+22655487 None:intergenic
CGCAGGATTTGCTTGGTCAT+GGG 0.369280 4.3:-22652842 MS.gene052566:intron
ATGGTTTCGCTAATCACGTT+TGG 0.372925 4.3:-22655040 MS.gene052566:CDS
CTGTGCTATTTAATTCCATT+GGG 0.374419 4.3:-22653223 MS.gene052566:CDS
CCGACCAAACCTACGAGTTA+TGG 0.376402 4.3:+22655115 None:intergenic
CCAATTGTTATTATAAGTGC+TGG 0.385151 4.3:+22653512 None:intergenic
GCTGGTGGTGGAATTCCCTT+TGG 0.395386 4.3:-22655529 MS.gene052566:CDS
ATCGTGGGTCGGATCTTGCT+TGG 0.396454 4.3:-22655011 MS.gene052566:CDS
ATCTTGCTTGGATTCGGTAT+CGG 0.398394 4.3:-22654999 MS.gene052566:CDS
AATGCTCCTCTATATTTGTA+AGG 0.400089 4.3:+22653656 None:intergenic
ATATAGACCTCAGCTTACTA+TGG 0.404147 4.3:-22653306 MS.gene052566:CDS
ATCATTGAGTTAGGGGTGTC+AGG 0.405600 4.3:+22653476 None:intergenic
GGTGGTGGAATTCCCTTTGG+AGG 0.410734 4.3:-22655526 MS.gene052566:CDS
TCGCAGGATTTGCTTGGTCA+TGG 0.411963 4.3:-22652843 MS.gene052566:intron
CATTGATGCCGGTAAATTGT+TGG 0.413750 4.3:+22653264 None:intergenic
ACTACTATAGCATACCATTC+TGG 0.413767 4.3:+22652889 None:intergenic
GGCAGTACTGGTTTGTCGAT+TGG 0.417895 4.3:+22655216 None:intergenic
GTTTCCACTTGTTCCAAACT+TGG 0.421857 4.3:+22652924 None:intergenic
CCAGCACTTATAATAACAAT+TGG 0.425551 4.3:-22653512 MS.gene052566:CDS
GGTCGGATCTTGCTTGGATT+CGG 0.426902 4.3:-22655005 MS.gene052566:CDS
AAGCAACCAACGAGGACAAA+AGG 0.427983 4.3:+22655141 None:intergenic
TGGGGATGGAGATTGAGTTT+AGG 0.430290 4.3:-22653548 MS.gene052566:CDS
TTTCAATTATCAATTACAAT+TGG 0.439512 4.3:-22653623 MS.gene052566:CDS
TCCACCATAACTCGTAGGTT+TGG 0.442986 4.3:-22655119 MS.gene052566:CDS
GACTGTCGTATTGGCAGTAC+TGG 0.451173 4.3:+22655204 None:intergenic
GCCAAAATCAAAGGTGGATG+GGG 0.463053 4.3:-22653566 MS.gene052566:CDS
CCGGTAAATTGTTGGAAGAA+TGG 0.465015 4.3:+22653272 None:intergenic
GTTGCAGTAGCAGCTGCAAT+TGG 0.468331 4.3:-22652949 MS.gene052566:CDS
GTGGTGGAATTCCCTTTGGA+GGG 0.473891 4.3:-22655525 MS.gene052566:CDS
TGCCAAAATCAAAGGTGGAT+GGG 0.477589 4.3:-22653567 MS.gene052566:CDS
CACGTTCGATCATTGAGTTA+GGG 0.482418 4.3:+22653468 None:intergenic
GGTCATGGGGTCCACTTGGT+TGG 0.486132 4.3:-22652828 MS.gene052566:CDS
GGTGGAATTCCCTTTGGAGG+GGG 0.487711 4.3:-22655523 MS.gene052566:CDS
TACCATTCTGGTAAATTACC+AGG 0.488138 4.3:+22652901 None:intergenic
CTCTGCAACAAATTTCTCCA+AGG 0.489471 4.3:+22653332 None:intergenic
CAATGCAAGTTGAAAACCCT+TGG 0.489947 4.3:-22653349 MS.gene052566:CDS
TTGCCAAAATCAAAGGTGGA+TGG 0.491873 4.3:-22653568 MS.gene052566:CDS
GCTCAACTTAAGAGAATTCG+CGG 0.498698 4.3:-22653425 MS.gene052566:CDS
CAATTTATGGAGTTGATAAG+TGG 0.498954 4.3:-22653130 MS.gene052566:CDS
TTTACGTCGCAGGATTTGCT+TGG 0.499321 4.3:-22652849 MS.gene052566:intron
GCTTGGTCATGGGGTCCACT+TGG 0.501841 4.3:-22652832 MS.gene052566:CDS
ATTGAGTTTAGGTGGTGCTA+TGG 0.503380 4.3:-22653537 MS.gene052566:CDS
CTTGGAGAAATTTGTTGCAG+AGG 0.508868 4.3:-22653331 MS.gene052566:CDS
CTTATGTCGGCTGTCATCAC+CGG 0.509517 4.3:-22653182 MS.gene052566:CDS
TGCTCAAATGCTTATATGCC+AGG 0.509755 4.3:-22653078 MS.gene052566:intron
GCCATTGTACCTTTCTGAGA+TGG 0.510459 4.3:-22653681 MS.gene052566:CDS
GGCAGCAACGATGCATGTTA+TGG 0.510869 4.3:+22655462 None:intergenic
TCAATGTCTGACTGTCGTAT+TGG 0.514995 4.3:+22655195 None:intergenic
AGCAACCAACGAGGACAAAA+GGG 0.520524 4.3:+22655142 None:intergenic
ATGCATGTTATGGTGACAAA+AGG 0.524617 4.3:+22655472 None:intergenic
TTTCTTCAGGAACGGATCCA+TGG 0.525363 4.3:+22655274 None:intergenic
CAAAAGGGCAGCCAGATACA+AGG 0.532872 4.3:+22655157 None:intergenic
TCACGTTTGGATGTTGATCG+TGG 0.535910 4.3:-22655027 MS.gene052566:CDS
TGACCTTGTGGCAGCTAGTG+AGG 0.536556 4.3:-22653375 MS.gene052566:CDS
TCTGCAACAAATTTCTCCAA+GGG 0.537563 4.3:+22653333 None:intergenic
ATGGCTCCTTACAAATATAG+AGG 0.539000 4.3:-22653662 MS.gene052566:CDS
ATGGAGTTGATAAGTGGGGT+AGG 0.540447 4.3:-22653124 MS.gene052566:CDS
ACCCTGGTAATTTACCAGAA+TGG 0.542433 4.3:-22652903 MS.gene052566:intron
CAATTGTTATTATAAGTGCT+GGG 0.542655 4.3:+22653513 None:intergenic
AAACATAATAACATTGATGC+CGG 0.544983 4.3:+22653253 None:intergenic
AACATGCATCGTTGCTGCCA+TGG 0.550465 4.3:-22655458 MS.gene052566:CDS
GGACGATGCTTCACTTATGT+CGG 0.550876 4.3:-22653195 MS.gene052566:CDS
AAATCAAAGGTGGATGGGGA+TGG 0.555549 4.3:-22653562 MS.gene052566:CDS
CACGTTTGGATGTTGATCGT+GGG 0.561063 4.3:-22655026 MS.gene052566:CDS
AATTTATGGAGTTGATAAGT+GGG 0.562763 4.3:-22653129 MS.gene052566:CDS
CCAATGGAATTAAATAGCAC+AGG 0.563015 4.3:+22653224 None:intergenic
AATTACAATTGGTATACTTG+TGG 0.564613 4.3:-22653612 MS.gene052566:CDS
GCAGGATTTGCTTGGTCATG+GGG 0.565635 4.3:-22652841 MS.gene052566:intron
GGTGCCAAGTTTGGAACAAG+TGG 0.573526 4.3:-22652928 MS.gene052566:CDS
ATCAGGTGGTGTGACGTCCA+TGG 0.573765 4.3:-22655291 MS.gene052566:intron
TTGGAAGAATGGTATCAATA+CGG 0.578844 4.3:+22653283 None:intergenic
AAGTAATCCTCCGAAAAGCA+TGG 0.579735 4.3:+22655085 None:intergenic
ACATGCATCGTTGCTGCCAT+GGG 0.580412 4.3:-22655457 MS.gene052566:CDS
TTGAGTTAGGGGTGTCAGGA+AGG 0.581549 4.3:+22653480 None:intergenic
AGCATCGTCCTTAAACCCAA+TGG 0.582163 4.3:+22653208 None:intergenic
CCATAACTCGTAGGTTTGGT+CGG 0.590786 4.3:-22655115 MS.gene052566:CDS
TTTGGATGTTGATCGTGGGT+CGG 0.595486 4.3:-22655022 MS.gene052566:CDS
TGTAAGGAGCCATCTCAGAA+AGG 0.603077 4.3:+22653672 None:intergenic
GGATGGAGATTGAGTTTAGG+TGG 0.604126 4.3:-22653545 MS.gene052566:CDS
ACGTTCGATCATTGAGTTAG+GGG 0.605638 4.3:+22653469 None:intergenic
GCCAAAGATCAAACCACCCA+TGG 0.605713 4.3:+22655441 None:intergenic
TTGCTTCCACCATAACTCGT+AGG 0.608506 4.3:-22655124 MS.gene052566:CDS
ACCATTCTGGTAAATTACCA+GGG 0.609317 4.3:+22652902 None:intergenic
TGCATCGTTGCTGCCATGGG+TGG 0.611537 4.3:-22655454 MS.gene052566:CDS
TGGTGGAATTCCCTTTGGAG+GGG 0.616351 4.3:-22655524 MS.gene052566:CDS
ATCGAACGTGGTGATCGCGA+TGG 0.621882 4.3:-22653455 MS.gene052566:CDS
ACCAAACCTACGAGTTATGG+TGG 0.623338 4.3:+22655118 None:intergenic
TTTGGAACAAGTGGAAACCC+TGG 0.624639 4.3:-22652919 MS.gene052566:CDS
AGCAACAACATTAACAACAC+CGG 0.641199 4.3:+22653163 None:intergenic
GCCATCTCAGAAAGGTACAA+TGG 0.642129 4.3:+22653680 None:intergenic
AGGCCTCACTAGCTGCCACA+AGG 0.646580 4.3:+22653372 None:intergenic
CAAAAGGAGTGAGGTTTCCG+GGG 0.647117 4.3:+22655488 None:intergenic
ATTTATGGAGTTGATAAGTG+GGG 0.652519 4.3:-22653128 MS.gene052566:CDS
CATTTATAAGAGCACCGACA+AGG 0.656226 4.3:+22655060 None:intergenic
TTATGGTGACAAAAGGAGTG+AGG 0.657034 4.3:+22655479 None:intergenic
CTAGGAACCAACCAACCAAG+TGG 0.663373 4.3:+22652817 None:intergenic
TGAAGAGTTCAATGACCTTG+TGG 0.670947 4.3:-22653387 MS.gene052566:CDS
CCTAACTCAATGATCGAACG+TGG 0.682044 4.3:-22653467 MS.gene052566:CDS
AATACGGCCATAGTAAGCTG+AGG 0.697256 4.3:+22653299 None:intergenic
TATGGTGGAAGCAACCAACG+AGG 0.797691 4.3:+22655133 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATATTAATCATTCTTAAT+TGG - chr4.3:22654597-22654616 MS.gene052566:intron 10.0%
!! ATTAATATTTAATATCAAGT+GGG + chr4.3:22654587-22654606 None:intergenic 10.0%
!!! AAATATCTTTTTGTTTTTTT+GGG - chr4.3:22653434-22653453 MS.gene052566:CDS 10.0%
!!! TAAATATCTTTTTGTTTTTT+TGG - chr4.3:22653433-22653452 MS.gene052566:CDS 10.0%
!!! TAATTTTTCATTATTTTAGA+AGG + chr4.3:22653595-22653614 None:intergenic 10.0%
!!! TATTTTTAATTTTTTCTTCA+TGG - chr4.3:22653722-22653741 MS.gene052566:intron 10.0%
!! ATAAATTAATGTACACTAAA+AGG + chr4.3:22653529-22653548 None:intergenic 15.0%
!! GATTAATATTTAATATCAAG+TGG + chr4.3:22654588-22654607 None:intergenic 15.0%
!! TTGTTTAAAAAAAGATATGT+AGG + chr4.3:22654520-22654539 None:intergenic 15.0%
!! TTTCAATTATCAATTACAAT+TGG - chr4.3:22654726-22654745 MS.gene052566:intron 15.0%
!!! AAACTTTGTTGATATTTTTA+TGG - chr4.3:22652986-22653005 MS.gene052566:intron 15.0%
!!! ATAGTATTCTTCTATTTTTT+TGG + chr4.3:22653852-22653871 None:intergenic 15.0%
!!! ATGAGTATTTTCATTATTTA+CGG - chr4.3:22654005-22654024 MS.gene052566:intron 15.0%
!!! ATGCATTAAATTTTATGTAA+CGG + chr4.3:22653974-22653993 None:intergenic 15.0%
!!! CATGATTTTTTTAACTTTAT+TGG - chr4.3:22653752-22653771 MS.gene052566:intron 15.0%
!!! TGTATTTTTCAAAAAAATCA+TGG + chr4.3:22653694-22653713 None:intergenic 15.0%
!!! TGTTACTTATGTTTTTTTTT+TGG - chr4.3:22654627-22654646 MS.gene052566:intron 15.0%
!!! TTTTGTTTTTGTTATTGTTA+TGG + chr4.3:22653804-22653823 None:intergenic 15.0%
!!! TTTTTTTGGTTAAATTTTAC+AGG - chr4.3:22654641-22654660 MS.gene052566:intron 15.0%
!! AAAAAAGTAGTTCAATACAT+TGG + chr4.3:22654763-22654782 None:intergenic 20.0%
!! AAACAGAATAACGTAAATTA+TGG - chr4.3:22653470-22653489 MS.gene052566:CDS 20.0%
!! AACAGAATAACGTAAATTAT+GGG - chr4.3:22653471-22653490 MS.gene052566:CDS 20.0%
!!! TTTAACACAAATTGATAGTT+TGG - chr4.3:22654278-22654297 MS.gene052566:intron 20.0%
!!! TTTTTTTGGGTTTGTTTTAT+GGG - chr4.3:22653447-22653466 MS.gene052566:CDS 20.0%
! AAAAGAACGAGAGAAATTAA+AGG + chr4.3:22653393-22653412 None:intergenic 25.0%
! AAACATAATAACATTGATGC+CGG + chr4.3:22655099-22655118 None:intergenic 25.0%
! AATTACAATTGGTATACTTG+TGG - chr4.3:22654737-22654756 MS.gene052566:intron 25.0%
! ACCAAATTGTAACATTAAAG+TGG + chr4.3:22654084-22654103 None:intergenic 25.0%
! ACTGTAAAAAACGTTAATGA+AGG + chr4.3:22653553-22653572 None:intergenic 25.0%
! ATAATAGATTAGTGGAAGAA+TGG + chr4.3:22654306-22654325 None:intergenic 25.0%
! ATACAACACAGACAAATTAA+AGG + chr4.3:22653654-22653673 None:intergenic 25.0%
! ATATCACATGGAAAGAAAAT+AGG + chr4.3:22654350-22654369 None:intergenic 25.0%
! ATTTAATTCCATTGGGTTTA+AGG - chr4.3:22655133-22655152 MS.gene052566:CDS 25.0%
! GAAAAATTTGGCAAAAGATT+TGG + chr4.3:22654224-22654243 None:intergenic 25.0%
! GTGAGATATATTATATCACA+TGG + chr4.3:22654362-22654381 None:intergenic 25.0%
! TATCACATGGAAAGAAAATA+GGG + chr4.3:22654349-22654368 None:intergenic 25.0%
! TCCACTTTAATGTTACAATT+TGG - chr4.3:22654080-22654099 MS.gene052566:intron 25.0%
! TCTATGTATGATAGTATTCT+CGG - chr4.3:22654133-22654152 MS.gene052566:intron 25.0%
! TGGTAGTAATAATAGATTAG+TGG + chr4.3:22654314-22654333 None:intergenic 25.0%
! TGTTAGTGAAGAGAAAAATT+TGG + chr4.3:22654236-22654255 None:intergenic 25.0%
!! CAATTGTTATTATAAGTGCT+GGG + chr4.3:22654839-22654858 None:intergenic 25.0%
!!! AACGTTTGTTTTTTGTTGAA+TGG - chr4.3:22653029-22653048 MS.gene052566:intron 25.0%
!!! AATTTATGGAGTTGATAAGT+GGG - chr4.3:22655220-22655239 MS.gene052566:CDS 25.0%
!!! ACGTTTGTTTTTTGTTGAAT+GGG - chr4.3:22653030-22653049 MS.gene052566:intron 25.0%
!!! GTTTTTTTGGGTTTGTTTTA+TGG - chr4.3:22653446-22653465 MS.gene052566:CDS 25.0%
!!! TACTTTTTTGCCAAAATCAA+AGG - chr4.3:22654774-22654793 MS.gene052566:intron 25.0%
!!! TATTTTTGAATGCAAAGACT+TGG + chr4.3:22654416-22654435 None:intergenic 25.0%
!!! TGAGTCAGTATACTTTTTTT+TGG + chr4.3:22653941-22653960 None:intergenic 25.0%
AAAAAAGATATGTAGGACCA+CGG + chr4.3:22654513-22654532 None:intergenic 30.0%
AAATAGGGACACAATAATTG+TGG + chr4.3:22654334-22654353 None:intergenic 30.0%
AATGCTCCTCTATATTTGTA+AGG + chr4.3:22654696-22654715 None:intergenic 30.0%
CCAATTTGAAGAGTTTCAAA+AGG + chr4.3:22654174-22654193 None:intergenic 30.0%
CCAGCACTTATAATAACAAT+TGG - chr4.3:22654837-22654856 MS.gene052566:intron 30.0%
GGAAAAAATTTCTTCAGGAA+CGG + chr4.3:22653086-22653105 None:intergenic 30.0%
TCAACTTGTAACGTCTATAT+TGG + chr4.3:22654483-22654502 None:intergenic 30.0%
TCTTCAAATTGGACTTTGTT+TGG - chr4.3:22654182-22654201 MS.gene052566:intron 30.0%
TTGGAAGAATGGTATCAATA+CGG + chr4.3:22655069-22655088 None:intergenic 30.0%
! CAATATGCATTGATGTGTAT+AGG - chr4.3:22655378-22655397 MS.gene052566:intron 30.0%
! CCAATTGTTATTATAAGTGC+TGG + chr4.3:22654840-22654859 None:intergenic 30.0%
!! ATAGAGGAGCATTGAATATT+GGG - chr4.3:22654703-22654722 MS.gene052566:intron 30.0%
!! ATTTATGGAGTTGATAAGTG+GGG - chr4.3:22655221-22655240 MS.gene052566:CDS 30.0%
!! CAATTTATGGAGTTGATAAG+TGG - chr4.3:22655219-22655238 MS.gene052566:CDS 30.0%
!! CTGTGCTATTTAATTCCATT+GGG - chr4.3:22655126-22655145 MS.gene052566:CDS 30.0%
!! TATAGAGGAGCATTGAATAT+TGG - chr4.3:22654702-22654721 MS.gene052566:intron 30.0%
!!! CCTTTTGAAACTCTTCAAAT+TGG - chr4.3:22654171-22654190 MS.gene052566:intron 30.0%
!!! CGTTTGTTTTTTGTTGAATG+GGG - chr4.3:22653031-22653050 MS.gene052566:intron 30.0%
!!! GTTCCTGAAGAAATTTTTTC+CGG - chr4.3:22653085-22653104 MS.gene052566:CDS 30.0%
!!! TTTTTTGCCAAAATCAAAGG+TGG - chr4.3:22654777-22654796 MS.gene052566:intron 30.0%
AAAAAGATATGTAGGACCAC+GGG + chr4.3:22654512-22654531 None:intergenic 35.0%
ACCATTCTGGTAAATTACCA+GGG + chr4.3:22655450-22655469 None:intergenic 35.0%
ACTAACATGCTTGAATGTGA+TGG - chr4.3:22654249-22654268 MS.gene052566:intron 35.0%
ACTACTATAGCATACCATTC+TGG + chr4.3:22655463-22655482 None:intergenic 35.0%
ACTTGGAAAATTATGCAAGC+TGG + chr4.3:22654399-22654418 None:intergenic 35.0%
AGCAACAACATTAACAACAC+CGG + chr4.3:22655189-22655208 None:intergenic 35.0%
ATATAGACCTCAGCTTACTA+TGG - chr4.3:22655043-22655062 MS.gene052566:CDS 35.0%
ATCAAAGTTAAGACGTTACC+TGG + chr4.3:22655292-22655311 None:intergenic 35.0%
ATGCATGTTATGGTGACAAA+AGG + chr4.3:22652880-22652899 None:intergenic 35.0%
ATGGCTCCTTACAAATATAG+AGG - chr4.3:22654687-22654706 MS.gene052566:intron 35.0%
CCAATGGAATTAAATAGCAC+AGG + chr4.3:22655128-22655147 None:intergenic 35.0%
CCATTCTTCCAACAATTTAC+CGG - chr4.3:22655077-22655096 MS.gene052566:CDS 35.0%
GCTACTTGTGTCTCAATTTA+TGG - chr4.3:22655206-22655225 MS.gene052566:CDS 35.0%
TACCATTCTGGTAAATTACC+AGG + chr4.3:22655451-22655470 None:intergenic 35.0%
TCTGCAACAAATTTCTCCAA+GGG + chr4.3:22655019-22655038 None:intergenic 35.0%
TTGATCTTTGGCTACGATAT+TGG - chr4.3:22652919-22652938 MS.gene052566:CDS 35.0%
! AATTGGACTTTGTTTGGTTG+CGG - chr4.3:22654188-22654207 MS.gene052566:intron 35.0%
!! CCTGTGCTATTTAATTCCAT+TGG - chr4.3:22655125-22655144 MS.gene052566:CDS 35.0%
AAGTAATCCTCCGAAAAGCA+TGG + chr4.3:22653267-22653286 None:intergenic 40.0%
ACCCTGGTAATTTACCAGAA+TGG - chr4.3:22655446-22655465 MS.gene052566:CDS 40.0%
ACGTTCGATCATTGAGTTAG+GGG + chr4.3:22654883-22654902 None:intergenic 40.0%
AGCACCACCTTCAAGAAAAA+GGG + chr4.3:22655255-22655274 None:intergenic 40.0%
ATGGTTTCGCTAATCACGTT+TGG - chr4.3:22653309-22653328 MS.gene052566:CDS 40.0%
CACGTTCGATCATTGAGTTA+GGG + chr4.3:22654884-22654903 None:intergenic 40.0%
CATTGATGCCGGTAAATTGT+TGG + chr4.3:22655088-22655107 None:intergenic 40.0%
CCGGTAAATTGTTGGAAGAA+TGG + chr4.3:22655080-22655099 None:intergenic 40.0%
CTCTGCAACAAATTTCTCCA+AGG + chr4.3:22655020-22655039 None:intergenic 40.0%
GAAAATTATGCAAGCTGGTG+TGG + chr4.3:22654394-22654413 None:intergenic 40.0%
GCTCAACTTAAGAGAATTCG+CGG - chr4.3:22654924-22654943 MS.gene052566:intron 40.0%
GGCTACGATATTGGAATTTC+AGG - chr4.3:22652928-22652947 MS.gene052566:CDS 40.0%
GTTTACATCGTCCTTGTATC+TGG - chr4.3:22653181-22653200 MS.gene052566:CDS 40.0%
GTTTCCACTTGTTCCAAACT+TGG + chr4.3:22655428-22655447 None:intergenic 40.0%
TCAATGTCTGACTGTCGTAT+TGG + chr4.3:22653157-22653176 None:intergenic 40.0%
TGAAGAGTTCAATGACCTTG+TGG - chr4.3:22654962-22654981 MS.gene052566:intron 40.0%
TGCCAAAATCAAAGGTGGAT+GGG - chr4.3:22654782-22654801 MS.gene052566:intron 40.0%
TGCTCAAATGCTTATATGCC+AGG - chr4.3:22655271-22655290 MS.gene052566:CDS 40.0%
TTATGGTGACAAAAGGAGTG+AGG + chr4.3:22652873-22652892 None:intergenic 40.0%
TTCATTTGCATTTACGTCGC+AGG - chr4.3:22655490-22655509 MS.gene052566:CDS 40.0%
TTGCCAAAATCAAAGGTGGA+TGG - chr4.3:22654781-22654800 MS.gene052566:intron 40.0%
TTGTTGAATGGGGTTTGATC+AGG - chr4.3:22653041-22653060 MS.gene052566:intron 40.0%
TTTGTTTGGTTGCGGTGTAA+AGG - chr4.3:22654196-22654215 MS.gene052566:intron 40.0%
! AAACTTTCCATGCTTTTCGG+AGG - chr4.3:22653257-22653276 MS.gene052566:CDS 40.0%
! AGGGTTTTCAACTTGCATTG+AGG + chr4.3:22655000-22655019 None:intergenic 40.0%
! ATCTTGCTTGGATTCGGTAT+CGG - chr4.3:22653350-22653369 MS.gene052566:CDS 40.0%
! ATTGAGTTTAGGTGGTGCTA+TGG - chr4.3:22654812-22654831 MS.gene052566:intron 40.0%
! ATTGGTCCTCGTTCTTTTTC+CGG + chr4.3:22653118-22653137 None:intergenic 40.0%
! CAATGCAAGTTGAAAACCCT+TGG - chr4.3:22655000-22655019 MS.gene052566:CDS 40.0%
! CGGAAACTTTCCATGCTTTT+CGG - chr4.3:22653254-22653273 MS.gene052566:CDS 40.0%
! CTTGTCGGTGCTCTTATAAA+TGG - chr4.3:22653290-22653309 MS.gene052566:CDS 40.0%
!! CATTTATAAGAGCACCGACA+AGG + chr4.3:22653292-22653311 None:intergenic 40.0%
!! CTTGGAGAAATTTGTTGCAG+AGG - chr4.3:22655018-22655037 MS.gene052566:CDS 40.0%
!! GGAGGATTACTTTTCCTTGT+CGG - chr4.3:22653275-22653294 MS.gene052566:CDS 40.0%
!!! CCTGAAGAAATTTTTTCCGG+CGG - chr4.3:22653088-22653107 MS.gene052566:CDS 40.0%
AAATCAAAGGTGGATGGGGA+TGG - chr4.3:22654787-22654806 MS.gene052566:intron 45.0%
AAGCAACCAACGAGGACAAA+AGG + chr4.3:22653211-22653230 None:intergenic 45.0%
AATACGGCCATAGTAAGCTG+AGG + chr4.3:22655053-22655072 None:intergenic 45.0%
ACAAAAGGAGTGAGGTTTCC+GGG + chr4.3:22652865-22652884 None:intergenic 45.0%
ACCAAACCTACGAGTTATGG+TGG + chr4.3:22653234-22653253 None:intergenic 45.0%
AGCAACCAACGAGGACAAAA+GGG + chr4.3:22653210-22653229 None:intergenic 45.0%
AGCATCGTCCTTAAACCCAA+TGG + chr4.3:22655144-22655163 None:intergenic 45.0%
CACGTTTGGATGTTGATCGT+GGG - chr4.3:22653323-22653342 MS.gene052566:CDS 45.0%
CCACGTTCGATCATTGAGTT+AGG + chr4.3:22654885-22654904 None:intergenic 45.0%
CCGCCGGAAAAAATTTCTTC+AGG + chr4.3:22653091-22653110 None:intergenic 45.0%
CCTAACTCAATGATCGAACG+TGG - chr4.3:22654882-22654901 MS.gene052566:intron 45.0%
GACAAAAGGAGTGAGGTTTC+CGG + chr4.3:22652866-22652885 None:intergenic 45.0%
GAGCACCACCTTCAAGAAAA+AGG + chr4.3:22655256-22655275 None:intergenic 45.0%
GCCAAAATCAAAGGTGGATG+GGG - chr4.3:22654783-22654802 MS.gene052566:intron 45.0%
GGACGATGCTTCACTTATGT+CGG - chr4.3:22655154-22655173 MS.gene052566:CDS 45.0%
GGATGGAGATTGAGTTTAGG+TGG - chr4.3:22654804-22654823 MS.gene052566:intron 45.0%
TCACGTTTGGATGTTGATCG+TGG - chr4.3:22653322-22653341 MS.gene052566:CDS 45.0%
TCCACCATAACTCGTAGGTT+TGG - chr4.3:22653230-22653249 MS.gene052566:CDS 45.0%
TGGGGATGGAGATTGAGTTT+AGG - chr4.3:22654801-22654820 MS.gene052566:intron 45.0%
TGTAAGGAGCCATCTCAGAA+AGG + chr4.3:22654680-22654699 None:intergenic 45.0%
TTGAATGGGGTTTGATCAGG+TGG - chr4.3:22653044-22653063 MS.gene052566:intron 45.0%
TTGCTTCCACCATAACTCGT+AGG - chr4.3:22653225-22653244 MS.gene052566:CDS 45.0%
TTTCTTCAGGAACGGATCCA+TGG + chr4.3:22653078-22653097 None:intergenic 45.0%
TTTGGATGTTGATCGTGGGT+CGG - chr4.3:22653327-22653346 MS.gene052566:CDS 45.0%
! AGAGCCCTTTTTCTTGAAGG+TGG - chr4.3:22655248-22655267 MS.gene052566:CDS 45.0%
! AGGAGAGCCCTTTTTCTTGA+AGG - chr4.3:22655245-22655264 MS.gene052566:CDS 45.0%
! CCATAACTCGTAGGTTTGGT+CGG - chr4.3:22653234-22653253 MS.gene052566:CDS 45.0%
! GCCATCTCAGAAAGGTACAA+TGG + chr4.3:22654672-22654691 None:intergenic 45.0%
! GCCATTGTACCTTTCTGAGA+TGG - chr4.3:22654668-22654687 MS.gene052566:intron 45.0%
! TACAAGTTGAGAAGAACCCG+TGG - chr4.3:22654493-22654512 MS.gene052566:intron 45.0%
! TCTTGCTTGGATTCGGTATC+GGG - chr4.3:22653351-22653370 MS.gene052566:CDS 45.0%
! TTTACGTCGCAGGATTTGCT+TGG - chr4.3:22655500-22655519 MS.gene052566:CDS 45.0%
! TTTGGAACAAGTGGAAACCC+TGG - chr4.3:22655430-22655449 MS.gene052566:CDS 45.0%
!! ATCATTGAGTTAGGGGTGTC+AGG + chr4.3:22654876-22654895 None:intergenic 45.0%
!! ATGGAGTTGATAAGTGGGGT+AGG - chr4.3:22655225-22655244 MS.gene052566:CDS 45.0%
!! TCCCCATCCACCTTTGATTT+TGG + chr4.3:22654787-22654806 None:intergenic 45.0%
!!! AATTTTTTCCGGCGGTGTAC+CGG - chr4.3:22653096-22653115 MS.gene052566:CDS 45.0%
!! AAAAAATTAAAAATAATTCA+AGG + chr4.3:22653717-22653736 None:intergenic 5.0%
AACATGCATCGTTGCTGCCA+TGG - chr4.3:22652891-22652910 MS.gene052566:intron 50.0%
ACATGCATCGTTGCTGCCAT+GGG - chr4.3:22652892-22652911 MS.gene052566:intron 50.0%
CAAAAGGAGTGAGGTTTCCG+GGG + chr4.3:22652864-22652883 None:intergenic 50.0%
CAAAAGGGCAGCCAGATACA+AGG + chr4.3:22653195-22653214 None:intergenic 50.0%
CCGACCAAACCTACGAGTTA+TGG + chr4.3:22653237-22653256 None:intergenic 50.0%
CTAGGAACCAACCAACCAAG+TGG + chr4.3:22655535-22655554 None:intergenic 50.0%
GCCAAAGATCAAACCACCCA+TGG + chr4.3:22652911-22652930 None:intergenic 50.0%
GCCATGGGTGGTTTGATCTT+TGG - chr4.3:22652907-22652926 MS.gene052566:CDS 50.0%
GGCAGCAACGATGCATGTTA+TGG + chr4.3:22652890-22652909 None:intergenic 50.0%
GGTCGGATCTTGCTTGGATT+CGG - chr4.3:22653344-22653363 MS.gene052566:CDS 50.0%
GGTGTACCGGAAAAAGAACG+AGG - chr4.3:22653109-22653128 MS.gene052566:CDS 50.0%
GTTGCAGTAGCAGCTGCAAT+TGG - chr4.3:22655400-22655419 MS.gene052566:intron 50.0%
TCTTTGTCACCCCCTCCAAA+GGG + chr4.3:22652838-22652857 None:intergenic 50.0%
! CGCAGGATTTGCTTGGTCAT+GGG - chr4.3:22655507-22655526 MS.gene052566:CDS 50.0%
! CTTATGTCGGCTGTCATCAC+CGG - chr4.3:22655167-22655186 MS.gene052566:CDS 50.0%
! GACTGTCGTATTGGCAGTAC+TGG + chr4.3:22653148-22653167 None:intergenic 50.0%
! GCAGGATTTGCTTGGTCATG+GGG - chr4.3:22655508-22655527 MS.gene052566:CDS 50.0%
! GGTGCCAAGTTTGGAACAAG+TGG - chr4.3:22655421-22655440 MS.gene052566:intron 50.0%
! GTGGTGGAATTCCCTTTGGA+GGG - chr4.3:22652824-22652843 MS.gene052566:CDS 50.0%
! TATGGTGGAAGCAACCAACG+AGG + chr4.3:22653219-22653238 None:intergenic 50.0%
! TCGCAGGATTTGCTTGGTCA+TGG - chr4.3:22655506-22655525 MS.gene052566:CDS 50.0%
! TGGTGGAATTCCCTTTGGAG+GGG - chr4.3:22652825-22652844 MS.gene052566:CDS 50.0%
! TTCTTTTTCCGGTACACCGC+CGG + chr4.3:22653107-22653126 None:intergenic 50.0%
!! CGGTATCGGGTTTGCTAATC+AGG - chr4.3:22653364-22653383 MS.gene052566:CDS 50.0%
!! GCTGCAATTGGTGCCAAGTT+TGG - chr4.3:22655412-22655431 MS.gene052566:intron 50.0%
!! GGCAGTACTGGTTTGTCGAT+TGG + chr4.3:22653136-22653155 None:intergenic 50.0%
!! TTGAGTTAGGGGTGTCAGGA+AGG + chr4.3:22654872-22654891 None:intergenic 50.0%
ATCAGGTGGTGTGACGTCCA+TGG - chr4.3:22653058-22653077 MS.gene052566:intron 55.0%
ATCGAACGTGGTGATCGCGA+TGG - chr4.3:22654894-22654913 MS.gene052566:intron 55.0%
ATCGTGGGTCGGATCTTGCT+TGG - chr4.3:22653338-22653357 MS.gene052566:CDS 55.0%
ATGGGGTCCACTTGGTTGGT+TGG - chr4.3:22655525-22655544 MS.gene052566:CDS 55.0%
CTCTTTGTCACCCCCTCCAA+AGG + chr4.3:22652839-22652858 None:intergenic 55.0%
TGACCTTGTGGCAGCTAGTG+AGG - chr4.3:22654974-22654993 MS.gene052566:intron 55.0%
! GGTGGAATTCCCTTTGGAGG+GGG - chr4.3:22652826-22652845 MS.gene052566:CDS 55.0%
!! GCTGGTGGTGGAATTCCCTT+TGG - chr4.3:22652820-22652839 MS.gene052566:CDS 55.0%
!! GGTGGTGGAATTCCCTTTGG+AGG - chr4.3:22652823-22652842 MS.gene052566:CDS 55.0%
AGGCCTCACTAGCTGCCACA+AGG + chr4.3:22654980-22654999 None:intergenic 60.0%
GCTTGGTCATGGGGTCCACT+TGG - chr4.3:22655517-22655536 MS.gene052566:CDS 60.0%
GGTCATGGGGTCCACTTGGT+TGG - chr4.3:22655521-22655540 MS.gene052566:CDS 60.0%
TGCATCGTTGCTGCCATGGG+TGG - chr4.3:22652895-22652914 MS.gene052566:intron 60.0%
! GGCTGCCCTTTTGTCCTCGT+TGG - chr4.3:22653202-22653221 MS.gene052566:CDS 60.0%
!! GGGGGTGACAAAGAGTACCC+CGG - chr4.3:22652844-22652863 MS.gene052566:intron 60.0%


Chromosome Type Strat End Strand Name
chr4.3 gene 22652817 22655554 22652817 ID=MS.gene052566
chr4.3 mRNA 22652817 22655554 22652817 ID=MS.gene052566.t1;Parent=MS.gene052566
chr4.3 exon 22655422 22655554 22655422 ID=MS.gene052566.t1.exon1;Parent=MS.gene052566.t1
chr4.3 CDS 22655422 22655554 22655422 ID=cds.MS.gene052566.t1;Parent=MS.gene052566.t1
chr4.3 exon 22654986 22655308 22654986 ID=MS.gene052566.t1.exon2;Parent=MS.gene052566.t1
chr4.3 CDS 22654986 22655308 22654986 ID=cds.MS.gene052566.t1;Parent=MS.gene052566.t1
chr4.3 exon 22653079 22653708 22653079 ID=MS.gene052566.t1.exon3;Parent=MS.gene052566.t1
chr4.3 CDS 22653079 22653708 22653079 ID=cds.MS.gene052566.t1;Parent=MS.gene052566.t1
chr4.3 exon 22652904 22652971 22652904 ID=MS.gene052566.t1.exon4;Parent=MS.gene052566.t1
chr4.3 CDS 22652904 22652971 22652904 ID=cds.MS.gene052566.t1;Parent=MS.gene052566.t1
chr4.3 exon 22652817 22652859 22652817 ID=MS.gene052566.t1.exon5;Parent=MS.gene052566.t1
chr4.3 CDS 22652817 22652859 22652817 ID=cds.MS.gene052566.t1;Parent=MS.gene052566.t1
Gene Sequence

>MS.gene052566

ATGGCTGGTGGTGGAATTCCCTTTGGAGGGGGTGACAAAGAGTACCCCGGAAACCTCACTCCTTTTGTCACCATAACATGCATCGTTGCTGCCATGGGTGGTTTGATCTTTGGCTACGATATTGGAATTTCAGGTATATAGATTCATAACAAAAAAAAAAAATCATATAAAACTTTGTTGATATTTTTATGGTATGATCTTTTTCAGTGTTTAACGTTTGTTTTTTGTTGAATGGGGTTTGATCAGGTGGTGTGACGTCCATGGATCCGTTCCTGAAGAAATTTTTTCCGGCGGTGTACCGGAAAAAGAACGAGGACCAATCGACAAACCAGTACTGCCAATACGACAGTCAGACATTGACGATGTTTACATCGTCCTTGTATCTGGCTGCCCTTTTGTCCTCGTTGGTTGCTTCCACCATAACTCGTAGGTTTGGTCGGAAACTTTCCATGCTTTTCGGAGGATTACTTTTCCTTGTCGGTGCTCTTATAAATGGTTTCGCTAATCACGTTTGGATGTTGATCGTGGGTCGGATCTTGCTTGGATTCGGTATCGGGTTTGCTAATCAGGTATCCTTTAATTTCTCTCGTTCTTTTATTTTTCTTTTTTAATTTTGTAAATATCTTTTTGTTTTTTTGGGTTTGTTTTATGGGAAACAGAATAACGTAAATTATGGGTTGTGTTTAATATTATCTGATTTATTAACTCACCTTTTAGTGTACATTAATTTATTCCTTCATTAACGTTTTTTACAGTACTTTTTTAAAATAATAATCCTTCTAAAATAATGAAAAATTACGTCTTTGTCAAAAATATGAAAAGTATGTTTGTTGTCCTTTAATTTGTCTGTGTTGTATTGTCTTATTTTGATTATCCATGATTTTTTTGAAAAATACACCTTGAATTATTTTTAATTTTTTCTTCATGGTTGTTTGCATGATTTTTTTAACTTTATTGGATATGATATATAGTATATTTAGTGTACCATAACAATAACAAAAACAAAATCTTACATACTGTAGTTTGTGATCACCAAAAAAATAGAAGAATACTATAATTTGTTTTATTTTAGTTTGATTGATATTAAAAGCTTTCAGATAAAGTATACTGACTCATTTGTACCAAAAAAAAGTATACTGACTCATAGTAGTAAGCCGTTACATAAAATTTAATGCATTAATTGAAATAATGAGTATTTTCATTATTTACGGAAGTGATTGTGACGTAATGAATATAAATGAGCAAACACAAATTTTGAATTTTTCCACTTTAATGTTACAATTTGGTATGATCTACTCTACTATTCTATTTTCTACTCTATGTATGATAGTATTCTCGGTTGATATTGACTTTGCCTTTTGAAACTCTTCAAATTGGACTTTGTTTGGTTGCGGTGTAAAGGAACCAAATCTTTTGCCAAATTTTTCTCTTCACTAACATGCTTGAATGTGATGGCTTGATTTTAACACAAATTGATAGTTTGGCACCATTCTTCCACTAATCTATTATTACTACCACAATTATTGTGTCCCTATTTTCTTTCCATGTGATATAATATATCTCACTTCGTATTTCCACACCAGCTTGCATAATTTTCCAAGTCTTTGCATTCAAAAATACTATAATATAAAAAAAAAACATAAAATAATGTTTCTGATTCAAACCAATATAGACGTTACAAGTTGAGAAGAACCCGTGGTCCTACATATCTTTTTTTAAACAAAGTTCTATGATAATAACTCGTTTACTTGACATTGTTTATATGATCCCACTTGATATTAAATATTAATCATTCTTAATTGGTTTAATTTGTTACTTATGTTTTTTTTTTGGTTAAATTTTACAGGCTGTGCCATTGTACCTTTCTGAGATGGCTCCTTACAAATATAGAGGAGCATTGAATATTGGGTTTCAATTATCAATTACAATTGGTATACTTGTGGCCAATGTATTGAACTACTTTTTTGCCAAAATCAAAGGTGGATGGGGATGGAGATTGAGTTTAGGTGGTGCTATGGTCCCAGCACTTATAATAACAATTGGATCACTAGTCCTTCCTGACACCCCTAACTCAATGATCGAACGTGGTGATCGCGATGGAGCTAAAGCTCAACTTAAGAGAATTCGCGGTATTGAAGATGTTGATGAAGAGTTCAATGACCTTGTGGCAGCTAGTGAGGCCTCAATGCAAGTTGAAAACCCTTGGAGAAATTTGTTGCAGAGGAAATATAGACCTCAGCTTACTATGGCCGTATTGATACCATTCTTCCAACAATTTACCGGCATCAATGTTATTATGTTTTATGCACCTGTGCTATTTAATTCCATTGGGTTTAAGGACGATGCTTCACTTATGTCGGCTGTCATCACCGGTGTTGTTAATGTTGTTGCTACTTGTGTCTCAATTTATGGAGTTGATAAGTGGGGTAGGAGAGCCCTTTTTCTTGAAGGTGGTGCTCAAATGCTTATATGCCAGGTAACGTCTTAACTTTGATATGAATAATATTGTTTGTGTATATTAATTTTGTTACATTCATTTGATATGATTTGTTTAATTAATTCAATATGCATTGATGTGTATAGGTTGCAGTAGCAGCTGCAATTGGTGCCAAGTTTGGAACAAGTGGAAACCCTGGTAATTTACCAGAATGGTATGCTATAGTAGTTGTGCTCTTCATTTGCATTTACGTCGCAGGATTTGCTTGGTCATGGGGTCCACTTGGTTGGTTGGTTCCTAG

Protein sequence

>MS.gene052566.t1

MAGGGIPFGGGDKEYPGNLTPFVTITCIVAAMGGLIFGYDIGISGGVTSMDPFLKKFFPAVYRKKNEDQSTNQYCQYDSQTLTMFTSSLYLAALLSSLVASTITRRFGRKLSMLFGGLLFLVGALINGFANHVWMLIVGRILLGFGIGFANQAVPLYLSEMAPYKYRGALNIGFQLSITIGILVANVLNYFFAKIKGGWGWRLSLGGAMVPALIITIGSLVLPDTPNSMIERGDRDGAKAQLKRIRGIEDVDEEFNDLVAASEASMQVENPWRNLLQRKYRPQLTMAVLIPFFQQFTGINVIMFYAPVLFNSIGFKDDASLMSAVITGVVNVVATCVSIYGVDKWGRRALFLEGGAQMLICQVAVAAAIGAKFGTSGNPGNLPEWICLVMGSTWLVGS