Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069033.t1 | RHN46508.1 | 97.7 | 603 | 14 | 0 | 1 | 603 | 1 | 603 | 0.00E+00 | 1199.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069033.t1 | Q9FFT4 | 84.1 | 609 | 89 | 3 | 1 | 603 | 1 | 607 | 2.6e-306 | 1052.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069033.t1 | A0A396H177 | 97.7 | 603 | 14 | 0 | 1 | 603 | 1 | 603 | 0.0e+00 | 1199.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene05234 | MS.gene069033 | 0.806055 | 9.91E-50 | -1.69E-46 |
| MS.gene053421 | MS.gene069033 | 0.818125 | 2.31E-52 | -1.69E-46 |
| MS.gene054003 | MS.gene069033 | -0.801789 | 7.63E-49 | -1.69E-46 |
| MS.gene056387 | MS.gene069033 | -0.818124 | 2.31E-52 | -1.69E-46 |
| MS.gene058157 | MS.gene069033 | -0.807694 | 4.46E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene069033 | MS.gene33522 | PPI |
| MS.gene069033 | MS.gene064505 | PPI |
| MS.gene069033 | MS.gene81956 | PPI |
| MS.gene069033 | MS.gene81954 | PPI |
| MS.gene069033 | MS.gene013678 | PPI |
| MS.gene069033 | MS.gene02651 | PPI |
| MS.gene069033 | MS.gene013671 | PPI |
| MS.gene069033 | MS.gene02488 | PPI |
| MS.gene069033 | MS.gene02655 | PPI |
| MS.gene069033 | MS.gene26127 | PPI |
| MS.gene069033 | MS.gene81957 | PPI |
| MS.gene069033 | MS.gene017382 | PPI |
| MS.gene069033 | MS.gene02654 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069033.t1 | MTR_7g069540 | 92.066 | 605 | 46 | 2 | 1 | 603 | 1 | 605 | 0.0 | 1139 |
| MS.gene069033.t1 | MTR_7g069500 | 91.874 | 603 | 21 | 2 | 1 | 603 | 1 | 575 | 0.0 | 1114 |
| MS.gene069033.t1 | MTR_4g017200 | 85.832 | 607 | 82 | 3 | 1 | 603 | 1 | 607 | 0.0 | 1072 |
| MS.gene069033.t1 | MTR_5g046610 | 85.502 | 607 | 84 | 3 | 1 | 603 | 1 | 607 | 0.0 | 1069 |
| MS.gene069033.t1 | MTR_2g015560 | 81.250 | 576 | 104 | 1 | 28 | 603 | 11 | 582 | 0.0 | 987 |
| MS.gene069033.t1 | MTR_2g009330 | 68.528 | 591 | 180 | 1 | 10 | 600 | 25 | 609 | 0.0 | 876 |
| MS.gene069033.t1 | MTR_5g046620 | 50.622 | 241 | 42 | 5 | 233 | 472 | 1 | 165 | 8.34e-65 | 210 |
| MS.gene069033.t1 | MTR_3g099190 | 24.070 | 511 | 338 | 18 | 47 | 531 | 84 | 570 | 8.65e-17 | 84.3 |
| MS.gene069033.t1 | MTR_1g011530 | 46.667 | 75 | 37 | 1 | 349 | 423 | 31 | 102 | 3.01e-16 | 75.1 |
| MS.gene069033.t1 | MTR_2g027220 | 23.248 | 585 | 365 | 21 | 26 | 558 | 38 | 590 | 8.90e-14 | 74.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069033.t1 | AT4G33070 | 84.893 | 609 | 84 | 2 | 1 | 603 | 1 | 607 | 0.0 | 1071 |
| MS.gene069033.t1 | AT5G54960 | 84.072 | 609 | 89 | 3 | 1 | 603 | 1 | 607 | 0.0 | 1069 |
| MS.gene069033.t1 | AT5G01320 | 83.444 | 604 | 98 | 2 | 1 | 603 | 1 | 603 | 0.0 | 1056 |
| MS.gene069033.t1 | AT5G01330 | 82.550 | 596 | 100 | 1 | 8 | 603 | 1 | 592 | 0.0 | 1028 |
| MS.gene069033.t1 | AT5G17380 | 24.351 | 501 | 309 | 18 | 47 | 509 | 18 | 486 | 6.66e-18 | 87.8 |
Find 158 sgRNAs with CRISPR-Local
Find 244 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATTGGTGATGGAAGCTTTC+AGG | 0.099113 | 7.2:-34044924 | MS.gene069033:intron |
| GGACCCAATTCTAATGATTA+TGG | 0.232316 | 7.2:-34047336 | MS.gene069033:CDS |
| TACTTGGGAGCGAGTGAAAA+AGG | 0.254142 | 7.2:+34046185 | None:intergenic |
| CCCATTTCATTGGAACCTAT+TGG | 0.257000 | 7.2:-34045564 | MS.gene069033:CDS |
| CCATTTCATTGGAACCTATT+GGG | 0.261332 | 7.2:-34045563 | MS.gene069033:CDS |
| AAACATAAGCTATCTTTCTT+TGG | 0.266263 | 7.2:+34044480 | None:intergenic |
| TCTGAAGTTTACTGAGGATT+TGG | 0.266713 | 7.2:+34044372 | None:intergenic |
| TGTATCCTCCGTTGTTTATC+AGG | 0.267154 | 7.2:+34044749 | None:intergenic |
| CTGAAGTTTACTGAGGATTT+GGG | 0.267884 | 7.2:+34044373 | None:intergenic |
| TTAACTCTCAAAGGTTCTTT+TGG | 0.273563 | 7.2:+34045247 | None:intergenic |
| GATCGGGTTGTGGTTGCTAA+TGG | 0.314935 | 7.2:-34045400 | MS.gene069033:CDS |
| CCCAATAGGTTCCAATGAAA+TGG | 0.339643 | 7.2:+34045563 | None:intergenic |
| GCTTTCGCCACCCTCAGTTT+AGG | 0.339876 | 7.2:+34045676 | None:intergenic |
| GTGCTGTTACGTTCACTGTT+GGG | 0.343698 | 7.2:-34047428 | MS.gene069033:CDS |
| CAAATGCAATATGGTTCAAT+TGG | 0.346194 | 7.2:-34045010 | MS.gene069033:CDS |
| AGGATTCTTCATCATACTAT+TGG | 0.352361 | 7.2:-34047306 | MS.gene069033:CDS |
| GTTGCTAATGGACCTGCATT+TGG | 0.356868 | 7.2:-34045388 | MS.gene069033:CDS |
| AACAAAATGTCCACAATGTT+AGG | 0.362479 | 7.2:-34047753 | None:intergenic |
| AGTCCCATAATCATTAGAAT+TGG | 0.362617 | 7.2:+34047332 | None:intergenic |
| CAAGCAATCACTCGCTTCTC+GGG | 0.364950 | 7.2:+34044947 | None:intergenic |
| TATGAGTTTCAAATGCAATA+TGG | 0.365373 | 7.2:-34045019 | MS.gene069033:CDS |
| ATGAAATGGGGATGGTGCTC+AGG | 0.369145 | 7.2:+34045577 | None:intergenic |
| CATGAAACGACGTCGTTGTT+TGG | 0.370477 | 7.2:+34047708 | None:intergenic |
| GACGCTTCGCAAGTGCCTTT+AGG | 0.385948 | 7.2:+34045344 | None:intergenic |
| CAGTTCTTGATAACATTGTA+TGG | 0.391023 | 7.2:+34044700 | None:intergenic |
| TTGCCGCTTATTTGTATTGT+TGG | 0.393601 | 7.2:-34047360 | MS.gene069033:CDS |
| GAGCACCATCCCCATTTCAT+TGG | 0.394834 | 7.2:-34045574 | MS.gene069033:CDS |
| GCAAGCAATCACTCGCTTCT+CGG | 0.396937 | 7.2:+34044946 | None:intergenic |
| GAAGCAATTGCCACAGCAAC+AGG | 0.397655 | 7.2:-34044504 | MS.gene069033:CDS |
| CTAATGATTATGGGACTAGT+AGG | 0.404499 | 7.2:-34047326 | MS.gene069033:CDS |
| CCAATAGGTTCCAATGAAAT+GGG | 0.405441 | 7.2:+34045564 | None:intergenic |
| CAGCCAATACTTATATAAAC+AGG | 0.405748 | 7.2:+34046254 | None:intergenic |
| ACCGACGTCTTCTCCGTTCC+CGG | 0.411535 | 7.2:-34047579 | MS.gene069033:CDS |
| TTTAATGACTACAGCTCTGT+TGG | 0.425890 | 7.2:-34045469 | MS.gene069033:CDS |
| CAGGAGGCGATCGCGGTGGC+TGG | 0.435574 | 7.2:+34047654 | None:intergenic |
| GACCCAATTCTAATGATTAT+GGG | 0.436897 | 7.2:-34047335 | MS.gene069033:CDS |
| CGTACTCACAGCACCCCAAT+AGG | 0.437203 | 7.2:+34045549 | None:intergenic |
| CATACAATGTTATCAAGAAC+TGG | 0.450936 | 7.2:-34044699 | MS.gene069033:CDS |
| CTCAACTCCTGACTAAAATC+AGG | 0.453988 | 7.2:+34047279 | None:intergenic |
| TGCTGTTACGTTCACTGTTG+GGG | 0.454152 | 7.2:-34047427 | MS.gene069033:CDS |
| AGGCGATCGCGGTGGCTGGT+TGG | 0.460812 | 7.2:+34047658 | None:intergenic |
| AAGCCTGTTTATATAAGTAT+TGG | 0.461417 | 7.2:-34046257 | MS.gene069033:CDS |
| GTTGTTTATCAGGAAGATGA+TGG | 0.461963 | 7.2:+34044759 | None:intergenic |
| GTCCCATAATCATTAGAATT+GGG | 0.462038 | 7.2:+34047333 | None:intergenic |
| ATCAAAATGCATCCAAATGC+AGG | 0.464273 | 7.2:+34045376 | None:intergenic |
| CATTGAAGTGATTGTTCACA+AGG | 0.466013 | 7.2:-34044457 | MS.gene069033:CDS |
| CGACCATCTCATCAATGAAC+CGG | 0.471214 | 7.2:-34047535 | MS.gene069033:CDS |
| CATTTCATTGGAACCTATTG+GGG | 0.472154 | 7.2:-34045562 | MS.gene069033:CDS |
| CAATCATTGTGCAGCCCGAT+CGG | 0.474852 | 7.2:-34045417 | MS.gene069033:CDS |
| TGGTCTGTTGGTGCAACTCT+TGG | 0.476946 | 7.2:-34044986 | MS.gene069033:CDS |
| CCGTGATGCCATCAGCTAAA+GGG | 0.477384 | 7.2:-34045606 | MS.gene069033:CDS |
| CTAGTCGGCGTGCGAGGTGG+CGG | 0.480523 | 7.2:+34047616 | None:intergenic |
| TGTGCTGTTACGTTCACTGT+TGG | 0.481861 | 7.2:-34047429 | MS.gene069033:CDS |
| TTAGGACCACCTACTAGTAC+AGG | 0.482399 | 7.2:+34045694 | None:intergenic |
| TTTGATGAAGGATTTCCTAA+AGG | 0.483996 | 7.2:-34045359 | MS.gene069033:CDS |
| CCGCTTATTTGTATTGTTGG+TGG | 0.484728 | 7.2:-34047357 | MS.gene069033:CDS |
| TTGAAATTGCCTGAGGGATG+TGG | 0.486372 | 7.2:-34045136 | MS.gene069033:CDS |
| TGCAATATGGTTCAATTGGA+TGG | 0.486831 | 7.2:-34045006 | MS.gene069033:CDS |
| TTAATGACTACAGCTCTGTT+GGG | 0.491232 | 7.2:-34045468 | MS.gene069033:CDS |
| ACAACATCTGTTGTATATGT+TGG | 0.492054 | 7.2:+34045215 | None:intergenic |
| GACAGGATCACGACTGAAAG+TGG | 0.492188 | 7.2:+34046208 | None:intergenic |
| AATCATTGTGCAGCCCGATC+GGG | 0.492725 | 7.2:-34045416 | MS.gene069033:CDS |
| AGTGTTCTTAATGCTATAGC+TGG | 0.494975 | 7.2:-34047399 | MS.gene069033:CDS |
| GCCGTGATGCCATCAGCTAA+AGG | 0.496857 | 7.2:-34045607 | MS.gene069033:CDS |
| ACAGCTGTGATTGCTGAGAC+AGG | 0.499666 | 7.2:-34045184 | MS.gene069033:CDS |
| AGCTGTGATTGCTGAGACAG+GGG | 0.505266 | 7.2:-34045182 | MS.gene069033:CDS |
| CTATTGGGGTGCTGTGAGTA+CGG | 0.505817 | 7.2:-34045548 | MS.gene069033:CDS |
| GCAGTAAAACCTGTACTAGT+AGG | 0.506078 | 7.2:-34045703 | MS.gene069033:CDS |
| ATTGAGGTTGAAATTCATGA+TGG | 0.507826 | 7.2:-34044724 | MS.gene069033:CDS |
| AGACGTCGGTGACGCCGACT+TGG | 0.509266 | 7.2:+34047592 | None:intergenic |
| AGTATTGGCTGTAACTTGCC+TGG | 0.509795 | 7.2:-34046242 | MS.gene069033:CDS |
| CATAGGATATTTGTCCCAGA+TGG | 0.511574 | 7.2:-34045289 | MS.gene069033:CDS |
| TGCTGTAACGAGCTGAATGC+TGG | 0.511832 | 7.2:-34047495 | MS.gene069033:CDS |
| GCTATTGGCAGCAGAAACTC+TGG | 0.513104 | 7.2:+34044401 | None:intergenic |
| TGTGCAGCCCGATCGGGTTG+TGG | 0.514001 | 7.2:-34045410 | MS.gene069033:CDS |
| GGTTCAATTGGATGGTCTGT+TGG | 0.514958 | 7.2:-34044998 | MS.gene069033:CDS |
| TTAGCAACCACAACCCGATC+GGG | 0.517431 | 7.2:+34045403 | None:intergenic |
| ATTGAGTAACCACATGGGGT+TGG | 0.524127 | 7.2:-34045764 | MS.gene069033:CDS |
| AACATAACATTAACTCTCAA+AGG | 0.524430 | 7.2:+34045238 | None:intergenic |
| ATAGGCTGTGGTGAATAACT+TGG | 0.524960 | 7.2:-34046333 | MS.gene069033:intron |
| TTGCTGAGACAGGGGACTCA+TGG | 0.524993 | 7.2:-34045174 | MS.gene069033:CDS |
| GAGTGTGAGGTTGAAGTCGC+CGG | 0.527382 | 7.2:+34047560 | None:intergenic |
| AACACTTACCCACATCCCTC+AGG | 0.537513 | 7.2:+34045127 | None:intergenic |
| GCGGCCGAGTGTAGCGTCGC+AGG | 0.540411 | 7.2:+34047635 | None:intergenic |
| TTTCTTTGGTCCTGTTGCTG+TGG | 0.540855 | 7.2:+34044494 | None:intergenic |
| CATCTGGGACAAATATCCTA+TGG | 0.541696 | 7.2:+34045290 | None:intergenic |
| GCTCCGGTTCATTGATGAGA+TGG | 0.543638 | 7.2:+34047532 | None:intergenic |
| TATGCTCGGTCACGTGGTGT+CGG | 0.546337 | 7.2:-34047456 | MS.gene069033:CDS |
| AAGCAAAGAGCTGCTTGAGT+GGG | 0.547778 | 7.2:-34044427 | MS.gene069033:CDS |
| CAAGCAAAGAGCTGCTTGAG+TGG | 0.547979 | 7.2:-34044428 | MS.gene069033:CDS |
| GTGATTGCTTGCATTGGTGA+TGG | 0.552907 | 7.2:-34044935 | MS.gene069033:CDS |
| GCCTCCTGCGACGCTACACT+CGG | 0.559561 | 7.2:-34047639 | MS.gene069033:CDS |
| ACTTCTTCTCAAGAAAGAGA+AGG | 0.560019 | 7.2:-34045440 | MS.gene069033:CDS |
| TGCTTTACAGGTAACTGCAC+AGG | 0.560389 | 7.2:-34044815 | MS.gene069033:intron |
| TGAAGTTTACTGAGGATTTG+GGG | 0.560721 | 7.2:+34044374 | None:intergenic |
| GAGGTTGAAGTCGCCGGGAA+CGG | 0.560917 | 7.2:+34047566 | None:intergenic |
| GCTGATGCATACTTGTTCGC+AGG | 0.563251 | 7.2:-34045499 | MS.gene069033:CDS |
| AGTGTGAGGTTGAAGTCGCC+GGG | 0.566328 | 7.2:+34047561 | None:intergenic |
| TGAAATGGGGATGGTGCTCA+GGG | 0.568384 | 7.2:+34045578 | None:intergenic |
| ATTAGCAACCACAACCCGAT+CGG | 0.569214 | 7.2:+34045402 | None:intergenic |
| GCCGAGTGTAGCGTCGCAGG+AGG | 0.570351 | 7.2:+34047638 | None:intergenic |
| GGGACCATCCCTTTAGCTGA+TGG | 0.572399 | 7.2:+34045598 | None:intergenic |
| CCCTTTAGCTGATGGCATCA+CGG | 0.575591 | 7.2:+34045606 | None:intergenic |
| CTGCTTATGAAAATTACCAT+AGG | 0.576792 | 7.2:-34045306 | MS.gene069033:CDS |
| GATGCAATTCACAATGGTGA+AGG | 0.582372 | 7.2:-34044658 | MS.gene069033:CDS |
| GACGGTTATGCTCGGTCACG+TGG | 0.584252 | 7.2:-34047462 | MS.gene069033:CDS |
| CAGCTGTGATTGCTGAGACA+GGG | 0.585307 | 7.2:-34045183 | MS.gene069033:CDS |
| GTCGAACTAGCTGATGCAAG+TGG | 0.587023 | 7.2:-34045640 | MS.gene069033:CDS |
| AAGCGAGTGATTGCTTGCAT+TGG | 0.587132 | 7.2:-34044941 | MS.gene069033:CDS |
| TCACGACTGAAAGTGGGATG+AGG | 0.587384 | 7.2:+34046215 | None:intergenic |
| ATCAAGAACTGGAATTACAC+TGG | 0.587582 | 7.2:-34044688 | MS.gene069033:CDS |
| ATCTAAAGATCCTAACATTG+TGG | 0.588263 | 7.2:+34047743 | None:intergenic |
| CTTGGACTAGTCGGCGTGCG+AGG | 0.589598 | 7.2:+34047610 | None:intergenic |
| ATGCGGCTGACGGTTATGCT+CGG | 0.592533 | 7.2:-34047470 | MS.gene069033:CDS |
| AAAGTGGGATGAGGAATACC+AGG | 0.593405 | 7.2:+34046224 | None:intergenic |
| CAACCGATGAGGTTCAGCTC+CGG | 0.593930 | 7.2:+34047516 | None:intergenic |
| GAACCGGAGCTGAACCTCAT+CGG | 0.594651 | 7.2:-34047519 | MS.gene069033:CDS |
| CGAGCTGAATGCTGGTTATG+CGG | 0.602693 | 7.2:-34047487 | MS.gene069033:CDS |
| ACAATGGTGAAGGAAAATGT+TGG | 0.606866 | 7.2:-34044648 | MS.gene069033:CDS |
| GGACTAGTCGGCGTGCGAGG+TGG | 0.609593 | 7.2:+34047613 | None:intergenic |
| AATGCTGGTTATGCGGCTGA+CGG | 0.614053 | 7.2:-34047480 | MS.gene069033:CDS |
| GAAGTTTACTGAGGATTTGG+GGG | 0.615619 | 7.2:+34044375 | None:intergenic |
| AGCAAAGAGCTGCTTGAGTG+GGG | 0.619453 | 7.2:-34044426 | MS.gene069033:CDS |
| AGCGTCGCAGGAGGCGATCG+CGG | 0.619577 | 7.2:+34047647 | None:intergenic |
| AGGAAAATGTTGGACAACCA+AGG | 0.622216 | 7.2:-34044638 | MS.gene069033:intron |
| GTTCATTGATGAGATGGTCG+AGG | 0.622662 | 7.2:+34047538 | None:intergenic |
| AGGTTCCAATGAAATGGGGA+TGG | 0.624719 | 7.2:+34045569 | None:intergenic |
| CAACGGAGGATACACAATTG+AGG | 0.625719 | 7.2:-34044740 | MS.gene069033:CDS |
| AGTAGGTGGTCCTAAACTGA+GGG | 0.628023 | 7.2:-34045686 | MS.gene069033:CDS |
| GCTGTTACGTTCACTGTTGG+GGG | 0.628851 | 7.2:-34047426 | MS.gene069033:CDS |
| TTAGATTGAGTAACCACATG+GGG | 0.635921 | 7.2:-34045768 | MS.gene069033:intron |
| TGAAATTGCCTGAGGGATGT+GGG | 0.642606 | 7.2:-34045135 | MS.gene069033:intron |
| TGACGCCGACTTGGACTAGT+CGG | 0.644497 | 7.2:+34047601 | None:intergenic |
| CTGCTGCTTCCAACCCCATG+TGG | 0.646622 | 7.2:+34045755 | None:intergenic |
| TGCATCAGCTAGTTCGACAA+AGG | 0.650364 | 7.2:+34045645 | None:intergenic |
| TAGTAGGTGGTCCTAAACTG+AGG | 0.652385 | 7.2:-34045687 | MS.gene069033:CDS |
| ACAGGATCACGACTGAAAGT+GGG | 0.654306 | 7.2:+34046209 | None:intergenic |
| CTGTTACGTTCACTGTTGGG+GGG | 0.655184 | 7.2:-34047425 | MS.gene069033:CDS |
| AAGCAATCACTCGCTTCTCG+GGG | 0.655548 | 7.2:+34044948 | None:intergenic |
| TGAGATGGTCGAGGAGTGTG+AGG | 0.655926 | 7.2:+34047547 | None:intergenic |
| AGGTGGTCCTAAACTGAGGG+TGG | 0.656562 | 7.2:-34045683 | MS.gene069033:CDS |
| CCACCAACAATACAAATAAG+CGG | 0.658046 | 7.2:+34047357 | None:intergenic |
| GATGCCATCAGCTAAAGGGA+TGG | 0.659243 | 7.2:-34045602 | MS.gene069033:CDS |
| GGGGTTGGAAGCAGCAGTTG+AGG | 0.663030 | 7.2:-34045749 | MS.gene069033:CDS |
| ATCATCTTCCTGATAAACAA+CGG | 0.665526 | 7.2:-34044757 | MS.gene069033:CDS |
| GGTGGCTGGTTGGATCGAAG+AGG | 0.667849 | 7.2:+34047668 | None:intergenic |
| GTCGCAGGAGGCGATCGCGG+TGG | 0.669288 | 7.2:+34047650 | None:intergenic |
| ACCGACTCTGAAGTTTACTG+AGG | 0.674817 | 7.2:+34044366 | None:intergenic |
| GCACGCCGACTAGTCCAAGT+CGG | 0.675934 | 7.2:-34047606 | MS.gene069033:CDS |
| GTAAAACCTGTACTAGTAGG+TGG | 0.676238 | 7.2:-34045700 | MS.gene069033:CDS |
| TTGATTGATGCAATTCACAA+TGG | 0.677426 | 7.2:-34044664 | MS.gene069033:CDS |
| CAATAGGTTCCAATGAAATG+GGG | 0.678646 | 7.2:+34045565 | None:intergenic |
| TTTAGATTGAGTAACCACAT+GGG | 0.682397 | 7.2:-34045769 | MS.gene069033:intron |
| GCTCGTTACAGCAACCGATG+AGG | 0.687230 | 7.2:+34047505 | None:intergenic |
| AGGATGTATCGACAATGCTG+AGG | 0.697986 | 7.2:-34044795 | MS.gene069033:CDS |
| ATCTTCCTGATAAACAACGG+AGG | 0.706663 | 7.2:-34044754 | MS.gene069033:CDS |
| GTATCGACAATGCTGAGGTG+TGG | 0.717609 | 7.2:-34044790 | MS.gene069033:CDS |
| GCCGGGAACGGAGAAGACGT+CGG | 0.741181 | 7.2:+34047578 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATCATGGTAATTTAAGT+GGG | - | chr7.2:34045668-34045687 | MS.gene069033:CDS | 20.0% |
| !! | TAAAACATGTAATGTATGTT+TGG | + | chr7.2:34045588-34045607 | None:intergenic | 20.0% |
| !! | TAAAATCATGGTAATTTAAG+TGG | - | chr7.2:34045667-34045686 | MS.gene069033:CDS | 20.0% |
| !!! | AAAATTGTAGTAATTTTAGC+TGG | - | chr7.2:34045333-34045352 | MS.gene069033:CDS | 20.0% |
| !!! | ACTTAAATTACCATGATTTT+AGG | + | chr7.2:34045668-34045687 | None:intergenic | 20.0% |
| !!! | ATTTGTCATTTTTTGGTTTT+TGG | - | chr7.2:34044915-34044934 | MS.gene069033:intron | 20.0% |
| !!! | GCTAAAATTACTACAATTTT+AGG | + | chr7.2:34045333-34045352 | None:intergenic | 20.0% |
| !!! | TACATTACATGTTTTAATTG+AGG | - | chr7.2:34045592-34045611 | MS.gene069033:CDS | 20.0% |
| !!! | TTGCTAAATTTGTCATTTTT+TGG | - | chr7.2:34044908-34044927 | MS.gene069033:intron | 20.0% |
| !!! | TTTGTCATTTTTTGGTTTTT+GGG | - | chr7.2:34044916-34044935 | MS.gene069033:intron | 20.0% |
| ! | AAAAGAATTAACTGCAAGTT+TGG | - | chr7.2:34046146-34046165 | MS.gene069033:intron | 25.0% |
| ! | AAACATAAGCTATCTTTCTT+TGG | + | chr7.2:34047650-34047669 | None:intergenic | 25.0% |
| ! | AAATAGAGAAAGACTTACTT+GGG | + | chr7.2:34045960-34045979 | None:intergenic | 25.0% |
| ! | AACATAACATTAACTCTCAA+AGG | + | chr7.2:34046892-34046911 | None:intergenic | 25.0% |
| ! | AAGCCTGTTTATATAAGTAT+TGG | - | chr7.2:34045870-34045889 | MS.gene069033:intron | 25.0% |
| ! | AAGTTTGATAGAATCACATT+GGG | + | chr7.2:34046239-34046258 | None:intergenic | 25.0% |
| ! | TAAGTTTGATAGAATCACAT+TGG | + | chr7.2:34046240-34046259 | None:intergenic | 25.0% |
| ! | TATGAGTTTCAAATGCAATA+TGG | - | chr7.2:34047108-34047127 | MS.gene069033:intron | 25.0% |
| ! | TCATCAACATTTCCAATAAT+CGG | + | chr7.2:34046310-34046329 | None:intergenic | 25.0% |
| ! | TTCAAATCATACAAAGAATC+TGG | - | chr7.2:34046027-34046046 | MS.gene069033:intron | 25.0% |
| !! | AGTTGTTGTAAAGTAAGTTT+TGG | - | chr7.2:34045741-34045760 | MS.gene069033:CDS | 25.0% |
| !!! | AGGCTAGTTTTTGTTAAAAT+CGG | - | chr7.2:34046208-34046227 | MS.gene069033:CDS | 25.0% |
| !!! | TTGTGGTTTGATTTGATAAT+AGG | - | chr7.2:34045776-34045795 | MS.gene069033:intron | 25.0% |
| !!! | TTTTTGCTTTTGCAAAATCA+TGG | - | chr7.2:34045176-34045195 | MS.gene069033:CDS | 25.0% |
| ACAACATCTGTTGTATATGT+TGG | + | chr7.2:34046915-34046934 | None:intergenic | 30.0% | |
| ACATTTGGCTGTTGTAAAAT+GGG | - | chr7.2:34045392-34045411 | MS.gene069033:CDS | 30.0% | |
| AGAGCTGTAGTCATTAAAAA+TGG | + | chr7.2:34046656-34046675 | None:intergenic | 30.0% | |
| AGGATTCTTCATCATACTAT+TGG | - | chr7.2:34044821-34044840 | MS.gene069033:intron | 30.0% | |
| AGTCCCATAATCATTAGAAT+TGG | + | chr7.2:34044798-34044817 | None:intergenic | 30.0% | |
| ATCATCTTCCTGATAAACAA+CGG | - | chr7.2:34047370-34047389 | MS.gene069033:CDS | 30.0% | |
| ATCTAAAGATCCTAACATTG+TGG | + | chr7.2:34044387-34044406 | None:intergenic | 30.0% | |
| ATTGAGGTTGAAATTCATGA+TGG | - | chr7.2:34047403-34047422 | MS.gene069033:CDS | 30.0% | |
| CAAAAATTGAAATTGCCTGA+GGG | - | chr7.2:34046985-34047004 | MS.gene069033:intron | 30.0% | |
| CAAATGCAATATGGTTCAAT+TGG | - | chr7.2:34047117-34047136 | MS.gene069033:intron | 30.0% | |
| CAGCCAATACTTATATAAAC+AGG | + | chr7.2:34045876-34045895 | None:intergenic | 30.0% | |
| CAGCTCTTATATTCTTGTTA+TGG | + | chr7.2:34047556-34047575 | None:intergenic | 30.0% | |
| CATACAATGTTATCAAGAAC+TGG | - | chr7.2:34047428-34047447 | MS.gene069033:CDS | 30.0% | |
| CATACACTACATGTTTGAAT+TGG | - | chr7.2:34045242-34045261 | MS.gene069033:CDS | 30.0% | |
| CTGCTTATGAAAATTACCAT+AGG | - | chr7.2:34046821-34046840 | MS.gene069033:intron | 30.0% | |
| GAAATAGAGAAAGACTTACT+TGG | + | chr7.2:34045961-34045980 | None:intergenic | 30.0% | |
| GACCCAATTCTAATGATTAT+GGG | - | chr7.2:34044792-34044811 | MS.gene069033:CDS | 30.0% | |
| GAGCTGTAGTCATTAAAAAT+GGG | + | chr7.2:34046655-34046674 | None:intergenic | 30.0% | |
| GTCCCATAATCATTAGAATT+GGG | + | chr7.2:34044797-34044816 | None:intergenic | 30.0% | |
| GTTTATTGTGTTTGTGAAGT+TGG | - | chr7.2:34044972-34044991 | MS.gene069033:CDS | 30.0% | |
| TAAGTTAACAAGTGCATTTC+TGG | + | chr7.2:34046270-34046289 | None:intergenic | 30.0% | |
| TACATTTGGCTGTTGTAAAA+TGG | - | chr7.2:34045391-34045410 | MS.gene069033:CDS | 30.0% | |
| TCAAAAATTGAAATTGCCTG+AGG | - | chr7.2:34046984-34047003 | MS.gene069033:intron | 30.0% | |
| TCAAACATGTAGTGTATGTT+TGG | + | chr7.2:34045240-34045259 | None:intergenic | 30.0% | |
| TGTACATTGTCCTAAAATCA+TGG | - | chr7.2:34045655-34045674 | MS.gene069033:CDS | 30.0% | |
| TGTGATTCTATCAAACTTAC+TGG | - | chr7.2:34046241-34046260 | MS.gene069033:CDS | 30.0% | |
| TTAACTTATGTGTGAAGAAG+AGG | - | chr7.2:34046282-34046301 | MS.gene069033:CDS | 30.0% | |
| TTGATTGATGCAATTCACAA+TGG | - | chr7.2:34047463-34047482 | MS.gene069033:CDS | 30.0% | |
| TTTAGATTGAGTAACCACAT+GGG | - | chr7.2:34046358-34046377 | MS.gene069033:intron | 30.0% | |
| TTTGATGAAGGATTTCCTAA+AGG | - | chr7.2:34046768-34046787 | MS.gene069033:intron | 30.0% | |
| ! | ACTGATAAAATCTTGTTTGC+AGG | - | chr7.2:34047085-34047104 | MS.gene069033:intron | 30.0% |
| ! | ACTGTGATTTTGCAAAATCA+TGG | - | chr7.2:34045528-34045547 | MS.gene069033:CDS | 30.0% |
| ! | ATGATTTTGCAAAATCACAG+TGG | + | chr7.2:34045529-34045548 | None:intergenic | 30.0% |
| ! | CAGTTCTTGATAACATTGTA+TGG | + | chr7.2:34047430-34047449 | None:intergenic | 30.0% |
| ! | CATCGTATTTAAAGCAAGTT+TGG | + | chr7.2:34046080-34046099 | None:intergenic | 30.0% |
| ! | CTTGTTATGGAAGAAATTTG+AGG | + | chr7.2:34047543-34047562 | None:intergenic | 30.0% |
| ! | GATACATAGTGACTTTTGTT+TGG | - | chr7.2:34045446-34045465 | MS.gene069033:CDS | 30.0% |
| ! | TTAACTCTCAAAGGTTCTTT+TGG | + | chr7.2:34046883-34046902 | None:intergenic | 30.0% |
| ! | TTTTAGATTGAGTAACCACA+TGG | - | chr7.2:34046357-34046376 | MS.gene069033:intron | 30.0% |
| !! | ATTTGGATGCATTTTGATGA+AGG | - | chr7.2:34046756-34046775 | MS.gene069033:intron | 30.0% |
| !! | TTTGATTTGATAATAGGCTG+TGG | - | chr7.2:34045782-34045801 | MS.gene069033:intron | 30.0% |
| !!! | GCTAGTTTTTGTTAAAATCG+GGG | - | chr7.2:34046210-34046229 | MS.gene069033:CDS | 30.0% |
| !!! | GGCTAGTTTTTGTTAAAATC+GGG | - | chr7.2:34046209-34046228 | MS.gene069033:CDS | 30.0% |
| !!! | TTTGGTGATTGTTTTGATTG+TGG | - | chr7.2:34045759-34045778 | MS.gene069033:CDS | 30.0% |
| !!! | TTTTGGGTTGATTTGTTTGA+TGG | - | chr7.2:34044932-34044951 | MS.gene069033:CDS | 30.0% |
| ACAATGGTGAAGGAAAATGT+TGG | - | chr7.2:34047479-34047498 | MS.gene069033:CDS | 35.0% | |
| ACTACATGTTTGAATTGGAG+TGG | - | chr7.2:34045247-34045266 | MS.gene069033:CDS | 35.0% | |
| ACTTCTTCTCAAGAAAGAGA+AGG | - | chr7.2:34046687-34046706 | MS.gene069033:intron | 35.0% | |
| AGAATTAACTGCAAGTTTGG+TGG | - | chr7.2:34046149-34046168 | MS.gene069033:intron | 35.0% | |
| AGGGTTTGTCAGAATTATAG+TGG | - | chr7.2:34045477-34045496 | MS.gene069033:CDS | 35.0% | |
| AGTGTTCTTAATGCTATAGC+TGG | - | chr7.2:34044728-34044747 | MS.gene069033:CDS | 35.0% | |
| ATCAAAATGCATCCAAATGC+AGG | + | chr7.2:34046754-34046773 | None:intergenic | 35.0% | |
| ATCAAAGACACGCTAATTAC+TGG | + | chr7.2:34046000-34046019 | None:intergenic | 35.0% | |
| ATCAAGAACTGGAATTACAC+TGG | - | chr7.2:34047439-34047458 | MS.gene069033:CDS | 35.0% | |
| CAAAATCATGGTAAGCACTA+TGG | - | chr7.2:34045540-34045559 | MS.gene069033:CDS | 35.0% | |
| CAATAGGTTCCAATGAAATG+GGG | + | chr7.2:34046565-34046584 | None:intergenic | 35.0% | |
| CAGTGAGTTTGACAAAATCA+TGG | + | chr7.2:34045212-34045231 | None:intergenic | 35.0% | |
| CATTGAAGTGATTGTTCACA+AGG | - | chr7.2:34047670-34047689 | MS.gene069033:CDS | 35.0% | |
| CATTTCATTGGAACCTATTG+GGG | - | chr7.2:34046565-34046584 | MS.gene069033:intron | 35.0% | |
| CATTTGGCTGTTGTAAAATG+GGG | - | chr7.2:34045393-34045412 | MS.gene069033:CDS | 35.0% | |
| CCAATAGGTTCCAATGAAAT+GGG | + | chr7.2:34046566-34046585 | None:intergenic | 35.0% | |
| CCACCAACAATACAAATAAG+CGG | + | chr7.2:34044773-34044792 | None:intergenic | 35.0% | |
| CCATTTCATTGGAACCTATT+GGG | - | chr7.2:34046564-34046583 | MS.gene069033:intron | 35.0% | |
| CTACATGTTTGAATTGGAGT+GGG | - | chr7.2:34045248-34045267 | MS.gene069033:CDS | 35.0% | |
| CTTTCTCCTAAATGCTTTAC+AGG | - | chr7.2:34047300-34047319 | MS.gene069033:CDS | 35.0% | |
| GGACCCAATTCTAATGATTA+TGG | - | chr7.2:34044791-34044810 | MS.gene069033:CDS | 35.0% | |
| GGATCACTAGTAAGTTTAAC+AGG | + | chr7.2:34045705-34045724 | None:intergenic | 35.0% | |
| GTTGTTTATCAGGAAGATGA+TGG | + | chr7.2:34047371-34047390 | None:intergenic | 35.0% | |
| TGAGATTGTTGAAGCTTCAA+AGG | - | chr7.2:34046188-34046207 | MS.gene069033:CDS | 35.0% | |
| TGCAATATGGTTCAATTGGA+TGG | - | chr7.2:34047121-34047140 | MS.gene069033:intron | 35.0% | |
| TTAATGACTACAGCTCTGTT+GGG | - | chr7.2:34046659-34046678 | MS.gene069033:intron | 35.0% | |
| TTAGATTGAGTAACCACATG+GGG | - | chr7.2:34046359-34046378 | MS.gene069033:intron | 35.0% | |
| TTGAAGCTTCAACAATCTCA+CGG | + | chr7.2:34046188-34046207 | None:intergenic | 35.0% | |
| TTTAATGACTACAGCTCTGT+TGG | - | chr7.2:34046658-34046677 | MS.gene069033:intron | 35.0% | |
| ! | ACTTCAAAGGTTTTCCATCT+GGG | + | chr7.2:34046855-34046874 | None:intergenic | 35.0% |
| ! | AGTTTTTGTTAAAATCGGGG+TGG | - | chr7.2:34046213-34046232 | MS.gene069033:CDS | 35.0% |
| ! | CAGTTACCTGTAAAGCATTT+AGG | + | chr7.2:34047309-34047328 | None:intergenic | 35.0% |
| ! | CTAATGATTATGGGACTAGT+AGG | - | chr7.2:34044801-34044820 | MS.gene069033:CDS | 35.0% |
| ! | CTGTAAAGCATTTAGGAGAA+AGG | + | chr7.2:34047302-34047321 | None:intergenic | 35.0% |
| ! | TAGCTTTTACCAAATCACAG+CGG | + | chr7.2:34045143-34045162 | None:intergenic | 35.0% |
| ! | TTCATGCATGCTTCATTTTC+AGG | - | chr7.2:34047577-34047596 | MS.gene069033:CDS | 35.0% |
| ! | TTGCCGCTTATTTGTATTGT+TGG | - | chr7.2:34044767-34044786 | MS.gene069033:CDS | 35.0% |
| !! | ACTTTTGTTTGGTATCACAG+AGG | - | chr7.2:34045457-34045476 | MS.gene069033:CDS | 35.0% |
| !! | CTTTTGTTTGGTATCACAGA+GGG | - | chr7.2:34045458-34045477 | MS.gene069033:CDS | 35.0% |
| !! | TCAGACTGTTACTTGTTTTC+AGG | - | chr7.2:34044877-34044896 | MS.gene069033:intron | 35.0% |
| !!! | TTACTTGTTTTCAGGTTCGT+TGG | - | chr7.2:34044885-34044904 | MS.gene069033:intron | 35.0% |
| !!! | TTTTCAGGTATTCTGTGAAG+AGG | - | chr7.2:34047592-34047611 | MS.gene069033:CDS | 35.0% |
| AATTACTGGAAAGTGGGATG+AGG | + | chr7.2:34045986-34046005 | None:intergenic | 40.0% | |
| ACACGCTAATTACTGGAAAG+TGG | + | chr7.2:34045993-34046012 | None:intergenic | 40.0% | |
| AGGAAAATGTTGGACAACCA+AGG | - | chr7.2:34047489-34047508 | MS.gene069033:CDS | 40.0% | |
| ATAGGCTGTGGTGAATAACT+TGG | - | chr7.2:34045794-34045813 | MS.gene069033:intron | 40.0% | |
| ATCTTCCTGATAAACAACGG+AGG | - | chr7.2:34047373-34047392 | MS.gene069033:CDS | 40.0% | |
| CAACTAAGTGCATGCATGTT+TGG | + | chr7.2:34045726-34045745 | None:intergenic | 40.0% | |
| CACGCTAATTACTGGAAAGT+GGG | + | chr7.2:34045992-34046011 | None:intergenic | 40.0% | |
| CAGCCAAATGTATGCATGTT+TGG | + | chr7.2:34045383-34045402 | None:intergenic | 40.0% | |
| CAGTGAGTTTGTCAGAATCA+CGG | - | chr7.2:34045021-34045040 | MS.gene069033:CDS | 40.0% | |
| CATAGGATATTTGTCCCAGA+TGG | - | chr7.2:34046838-34046857 | MS.gene069033:intron | 40.0% | |
| CCCAATAGGTTCCAATGAAA+TGG | + | chr7.2:34046567-34046586 | None:intergenic | 40.0% | |
| CCCATTTCATTGGAACCTAT+TGG | - | chr7.2:34046563-34046582 | MS.gene069033:intron | 40.0% | |
| CCGCTTATTTGTATTGTTGG+TGG | - | chr7.2:34044770-34044789 | MS.gene069033:CDS | 40.0% | |
| CTCAACTCCTGACTAAAATC+AGG | + | chr7.2:34044851-34044870 | None:intergenic | 40.0% | |
| GAAGAAGAGGAACCGATTAT+TGG | - | chr7.2:34046295-34046314 | MS.gene069033:CDS | 40.0% | |
| GATGCAATTCACAATGGTGA+AGG | - | chr7.2:34047469-34047488 | MS.gene069033:CDS | 40.0% | |
| GCAGTAAAACCTGTACTAGT+AGG | - | chr7.2:34046424-34046443 | MS.gene069033:intron | 40.0% | |
| GGTCCAAACATGCATACATT+TGG | - | chr7.2:34045377-34045396 | MS.gene069033:CDS | 40.0% | |
| GTAAAACCTGTACTAGTAGG+TGG | - | chr7.2:34046427-34046446 | MS.gene069033:intron | 40.0% | |
| TAATTTAAGTGGGCGCATTG+TGG | - | chr7.2:34045678-34045697 | MS.gene069033:CDS | 40.0% | |
| TACACTGTCAAACTCACTAG+TGG | - | chr7.2:34045356-34045375 | MS.gene069033:CDS | 40.0% | |
| TGTATCCTCCGTTGTTTATC+AGG | + | chr7.2:34047381-34047400 | None:intergenic | 40.0% | |
| ! | CATCTGGGACAAATATCCTA+TGG | + | chr7.2:34046840-34046859 | None:intergenic | 40.0% |
| ! | GACTTCAAAGGTTTTCCATC+TGG | + | chr7.2:34046856-34046875 | None:intergenic | 40.0% |
| !! | CTGATTTTAGTCAGGAGTTG+AGG | - | chr7.2:34044849-34044868 | MS.gene069033:intron | 40.0% |
| !! | TCTTTTGGTGCAGACTTCAA+AGG | + | chr7.2:34046868-34046887 | None:intergenic | 40.0% |
| !! | TGGTGTTCCTGATTTTAGTC+AGG | - | chr7.2:34044841-34044860 | MS.gene069033:intron | 40.0% |
| AAAGTGGGATGAGGAATACC+AGG | + | chr7.2:34045906-34045925 | None:intergenic | 45.0% | |
| AAGCAAAGAGCTGCTTGAGT+GGG | - | chr7.2:34047700-34047719 | MS.gene069033:CDS | 45.0% | |
| AAGCGAGTGATTGCTTGCAT+TGG | - | chr7.2:34047186-34047205 | MS.gene069033:intron | 45.0% | |
| ACAGGATCACGACTGAAAGT+GGG | + | chr7.2:34045921-34045940 | None:intergenic | 45.0% | |
| ACTTGGGAGCGAGTGAAAAA+GGG | + | chr7.2:34045944-34045963 | None:intergenic | 45.0% | |
| AGGTTCCAATGAAATGGGGA+TGG | + | chr7.2:34046561-34046580 | None:intergenic | 45.0% | |
| AGTAGGTGGTCCTAAACTGA+GGG | - | chr7.2:34046441-34046460 | MS.gene069033:intron | 45.0% | |
| ATTAGCAACCACAACCCGAT+CGG | + | chr7.2:34046728-34046747 | None:intergenic | 45.0% | |
| ATTGAGTAACCACATGGGGT+TGG | - | chr7.2:34046363-34046382 | MS.gene069033:intron | 45.0% | |
| CAACGGAGGATACACAATTG+AGG | - | chr7.2:34047387-34047406 | MS.gene069033:CDS | 45.0% | |
| CAATGTCAAGTGACTCACCT+TGG | + | chr7.2:34047509-34047528 | None:intergenic | 45.0% | |
| CATGAAACGACGTCGTTGTT+TGG | + | chr7.2:34044422-34044441 | None:intergenic | 45.0% | |
| CGACCATCTCATCAATGAAC+CGG | - | chr7.2:34044592-34044611 | MS.gene069033:intron | 45.0% | |
| GGTTCAATTGGATGGTCTGT+TGG | - | chr7.2:34047129-34047148 | MS.gene069033:intron | 45.0% | |
| GTTCATTGATGAGATGGTCG+AGG | + | chr7.2:34044592-34044611 | None:intergenic | 45.0% | |
| TACTTGGGAGCGAGTGAAAA+AGG | + | chr7.2:34045945-34045964 | None:intergenic | 45.0% | |
| TAGTAGGTGGTCCTAAACTG+AGG | - | chr7.2:34046440-34046459 | MS.gene069033:intron | 45.0% | |
| TGAAATTGCCTGAGGGATGT+GGG | - | chr7.2:34046992-34047011 | MS.gene069033:intron | 45.0% | |
| TGCATCAGCTAGTTCGACAA+AGG | + | chr7.2:34046485-34046504 | None:intergenic | 45.0% | |
| TGCTGTTACGTTCACTGTTG+GGG | - | chr7.2:34044700-34044719 | MS.gene069033:CDS | 45.0% | |
| TGCTTTACAGGTAACTGCAC+AGG | - | chr7.2:34047312-34047331 | MS.gene069033:CDS | 45.0% | |
| TTAGGACCACCTACTAGTAC+AGG | + | chr7.2:34046436-34046455 | None:intergenic | 45.0% | |
| TTGAAATTGCCTGAGGGATG+TGG | - | chr7.2:34046991-34047010 | MS.gene069033:intron | 45.0% | |
| TTTCTTTGGTCCTGTTGCTG+TGG | + | chr7.2:34047636-34047655 | None:intergenic | 45.0% | |
| ! | AGGATGTATCGACAATGCTG+AGG | - | chr7.2:34047332-34047351 | MS.gene069033:CDS | 45.0% |
| ! | CAAGTTTGGTGGAATCATGG+TGG | - | chr7.2:34046160-34046179 | MS.gene069033:intron | 45.0% |
| ! | CTGCAAGTTTGGTGGAATCA+TGG | - | chr7.2:34046157-34046176 | MS.gene069033:intron | 45.0% |
| ! | GTGATTGCTTGCATTGGTGA+TGG | - | chr7.2:34047192-34047211 | MS.gene069033:intron | 45.0% |
| ! | GTGCTGTTACGTTCACTGTT+GGG | - | chr7.2:34044699-34044718 | MS.gene069033:CDS | 45.0% |
| ! | GTTGCTAATGGACCTGCATT+TGG | - | chr7.2:34046739-34046758 | MS.gene069033:intron | 45.0% |
| ! | TGTGCTGTTACGTTCACTGT+TGG | - | chr7.2:34044698-34044717 | MS.gene069033:CDS | 45.0% |
| !! | AGTATTGGCTGTAACTTGCC+TGG | - | chr7.2:34045885-34045904 | MS.gene069033:intron | 45.0% |
| !! | CATTGGTGATGGAAGCTTTC+AGG | - | chr7.2:34047203-34047222 | MS.gene069033:intron | 45.0% |
| AACACTTACCCACATCCCTC+AGG | + | chr7.2:34047003-34047022 | None:intergenic | 50.0% | |
| AAGCAATCACTCGCTTCTCG+GGG | + | chr7.2:34047182-34047201 | None:intergenic | 50.0% | |
| AATCATTGTGCAGCCCGATC+GGG | - | chr7.2:34046711-34046730 | MS.gene069033:intron | 50.0% | |
| ACAGCTGTGATTGCTGAGAC+AGG | - | chr7.2:34046943-34046962 | MS.gene069033:intron | 50.0% | |
| AGCAAAGAGCTGCTTGAGTG+GGG | - | chr7.2:34047701-34047720 | MS.gene069033:CDS | 50.0% | |
| AGCTGTGATTGCTGAGACAG+GGG | - | chr7.2:34046945-34046964 | MS.gene069033:intron | 50.0% | |
| ATGAAATGGGGATGGTGCTC+AGG | + | chr7.2:34046553-34046572 | None:intergenic | 50.0% | |
| CAAGCAAAGAGCTGCTTGAG+TGG | - | chr7.2:34047699-34047718 | MS.gene069033:CDS | 50.0% | |
| CAAGCAATCACTCGCTTCTC+GGG | + | chr7.2:34047183-34047202 | None:intergenic | 50.0% | |
| CAATCATTGTGCAGCCCGAT+CGG | - | chr7.2:34046710-34046729 | MS.gene069033:intron | 50.0% | |
| CAGCTGTGATTGCTGAGACA+GGG | - | chr7.2:34046944-34046963 | MS.gene069033:intron | 50.0% | |
| CCCTTTAGCTGATGGCATCA+CGG | + | chr7.2:34046524-34046543 | None:intergenic | 50.0% | |
| CCGTGATGCCATCAGCTAAA+GGG | - | chr7.2:34046521-34046540 | MS.gene069033:intron | 50.0% | |
| CTGTTACGTTCACTGTTGGG+GGG | - | chr7.2:34044702-34044721 | MS.gene069033:CDS | 50.0% | |
| GAAGCAATTGCCACAGCAAC+AGG | - | chr7.2:34047623-34047642 | MS.gene069033:CDS | 50.0% | |
| GACAGGATCACGACTGAAAG+TGG | + | chr7.2:34045922-34045941 | None:intergenic | 50.0% | |
| GAGCACCATCCCCATTTCAT+TGG | - | chr7.2:34046553-34046572 | MS.gene069033:intron | 50.0% | |
| GATGCCATCAGCTAAAGGGA+TGG | - | chr7.2:34046525-34046544 | MS.gene069033:intron | 50.0% | |
| GCAAGCAATCACTCGCTTCT+CGG | + | chr7.2:34047184-34047203 | None:intergenic | 50.0% | |
| GCTATTGGCAGCAGAAACTC+TGG | + | chr7.2:34047729-34047748 | None:intergenic | 50.0% | |
| GCTCCGGTTCATTGATGAGA+TGG | + | chr7.2:34044598-34044617 | None:intergenic | 50.0% | |
| GCTGATGCATACTTGTTCGC+AGG | - | chr7.2:34046628-34046647 | MS.gene069033:intron | 50.0% | |
| GCTGTTACGTTCACTGTTGG+GGG | - | chr7.2:34044701-34044720 | MS.gene069033:CDS | 50.0% | |
| GTCGAACTAGCTGATGCAAG+TGG | - | chr7.2:34046487-34046506 | MS.gene069033:intron | 50.0% | |
| GTGACTTTGCCGCTGTGATT+TGG | - | chr7.2:34045131-34045150 | MS.gene069033:intron | 50.0% | |
| TCACGACTGAAAGTGGGATG+AGG | + | chr7.2:34045915-34045934 | None:intergenic | 50.0% | |
| TGAAATGGGGATGGTGCTCA+GGG | + | chr7.2:34046552-34046571 | None:intergenic | 50.0% | |
| TGCTGTAACGAGCTGAATGC+TGG | - | chr7.2:34044632-34044651 | MS.gene069033:intron | 50.0% | |
| TGGTCTGTTGGTGCAACTCT+TGG | - | chr7.2:34047141-34047160 | MS.gene069033:intron | 50.0% | |
| TTAGCAACCACAACCCGATC+GGG | + | chr7.2:34046727-34046746 | None:intergenic | 50.0% | |
| ! | AATGCTGGTTATGCGGCTGA+CGG | - | chr7.2:34044647-34044666 | MS.gene069033:CDS | 50.0% |
| ! | CGAGCTGAATGCTGGTTATG+CGG | - | chr7.2:34044640-34044659 | MS.gene069033:CDS | 50.0% |
| ! | GATCGGGTTGTGGTTGCTAA+TGG | - | chr7.2:34046727-34046746 | MS.gene069033:intron | 50.0% |
| ! | GTATCGACAATGCTGAGGTG+TGG | - | chr7.2:34047337-34047356 | MS.gene069033:CDS | 50.0% |
| !! | CTATTGGGGTGCTGTGAGTA+CGG | - | chr7.2:34046579-34046598 | MS.gene069033:intron | 50.0% |
| AGGATTTGGGGGACGGCTAT+TGG | + | chr7.2:34047744-34047763 | None:intergenic | 55.0% | |
| AGGTGGTCCTAAACTGAGGG+TGG | - | chr7.2:34046444-34046463 | MS.gene069033:intron | 55.0% | |
| AGTGTGAGGTTGAAGTCGCC+GGG | + | chr7.2:34044569-34044588 | None:intergenic | 55.0% | |
| ATGCGGCTGACGGTTATGCT+CGG | - | chr7.2:34044657-34044676 | MS.gene069033:CDS | 55.0% | |
| CAACCGATGAGGTTCAGCTC+CGG | + | chr7.2:34044614-34044633 | None:intergenic | 55.0% | |
| CGTACTCACAGCACCCCAAT+AGG | + | chr7.2:34046581-34046600 | None:intergenic | 55.0% | |
| GAACCGGAGCTGAACCTCAT+CGG | - | chr7.2:34044608-34044627 | MS.gene069033:intron | 55.0% | |
| GACGCTTCGCAAGTGCCTTT+AGG | + | chr7.2:34046786-34046805 | None:intergenic | 55.0% | |
| GAGTGTGAGGTTGAAGTCGC+CGG | + | chr7.2:34044570-34044589 | None:intergenic | 55.0% | |
| GCCGTGATGCCATCAGCTAA+AGG | - | chr7.2:34046520-34046539 | MS.gene069033:intron | 55.0% | |
| GCTCGTTACAGCAACCGATG+AGG | + | chr7.2:34044625-34044644 | None:intergenic | 55.0% | |
| GCTTTCGCCACCCTCAGTTT+AGG | + | chr7.2:34046454-34046473 | None:intergenic | 55.0% | |
| GGAGCGAGTGAAAAAGGGAC+AGG | + | chr7.2:34045939-34045958 | None:intergenic | 55.0% | |
| GGGACCATCCCTTTAGCTGA+TGG | + | chr7.2:34046532-34046551 | None:intergenic | 55.0% | |
| TATGCTCGGTCACGTGGTGT+CGG | - | chr7.2:34044671-34044690 | MS.gene069033:CDS | 55.0% | |
| TTGCTGAGACAGGGGACTCA+TGG | - | chr7.2:34046953-34046972 | MS.gene069033:intron | 55.0% | |
| ! | TGAGATGGTCGAGGAGTGTG+AGG | + | chr7.2:34044583-34044602 | None:intergenic | 55.0% |
| !! | TGACGCCGACTTGGACTAGT+CGG | + | chr7.2:34044529-34044548 | None:intergenic | 55.0% |
| ACCGACGTCTTCTCCGTTCC+CGG | - | chr7.2:34044548-34044567 | MS.gene069033:intron | 60.0% | |
| GACGGTTATGCTCGGTCACG+TGG | - | chr7.2:34044665-34044684 | MS.gene069033:CDS | 60.0% | |
| GAGGTTGAAGTCGCCGGGAA+CGG | + | chr7.2:34044564-34044583 | None:intergenic | 60.0% | |
| GGGGTTGGAAGCAGCAGTTG+AGG | - | chr7.2:34046378-34046397 | MS.gene069033:intron | 60.0% | |
| ! | CTGCTGCTTCCAACCCCATG+TGG | + | chr7.2:34046375-34046394 | None:intergenic | 60.0% |
| ! | GCACGCCGACTAGTCCAAGT+CGG | - | chr7.2:34044521-34044540 | MS.gene069033:CDS | 60.0% |
| ! | GGTGGCTGGTTGGATCGAAG+AGG | + | chr7.2:34044462-34044481 | None:intergenic | 60.0% |
| GCCGGGAACGGAGAAGACGT+CGG | + | chr7.2:34044552-34044571 | None:intergenic | 65.0% | |
| GCCTCCTGCGACGCTACACT+CGG | - | chr7.2:34044488-34044507 | MS.gene069033:CDS | 65.0% | |
| ! | AGACGTCGGTGACGCCGACT+TGG | + | chr7.2:34044538-34044557 | None:intergenic | 65.0% |
| ! | TGTGCAGCCCGATCGGGTTG+TGG | - | chr7.2:34046717-34046736 | MS.gene069033:intron | 65.0% |
| !! | CTTGGACTAGTCGGCGTGCG+AGG | + | chr7.2:34044520-34044539 | None:intergenic | 65.0% |
| AGCGTCGCAGGAGGCGATCG+CGG | + | chr7.2:34044483-34044502 | None:intergenic | 70.0% | |
| AGGCGATCGCGGTGGCTGGT+TGG | + | chr7.2:34044472-34044491 | None:intergenic | 70.0% | |
| CTAGTCGGCGTGCGAGGTGG+CGG | + | chr7.2:34044514-34044533 | None:intergenic | 70.0% | |
| GCCGAGTGTAGCGTCGCAGG+AGG | + | chr7.2:34044492-34044511 | None:intergenic | 70.0% | |
| !! | GGACTAGTCGGCGTGCGAGG+TGG | + | chr7.2:34044517-34044536 | None:intergenic | 70.0% |
| CAGGAGGCGATCGCGGTGGC+TGG | + | chr7.2:34044476-34044495 | None:intergenic | 75.0% | |
| GCGGCCGAGTGTAGCGTCGC+AGG | + | chr7.2:34044495-34044514 | None:intergenic | 75.0% | |
| GTCGCAGGAGGCGATCGCGG+TGG | + | chr7.2:34044480-34044499 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 34044380 | 34047769 | 34044380 | ID=MS.gene069033 |
| chr7.2 | mRNA | 34044380 | 34047769 | 34044380 | ID=MS.gene069033.t1;Parent=MS.gene069033 |
| chr7.2 | exon | 34047251 | 34047769 | 34047251 | ID=MS.gene069033.t1.exon1;Parent=MS.gene069033.t1 |
| chr7.2 | CDS | 34047251 | 34047769 | 34047251 | ID=cds.MS.gene069033.t1;Parent=MS.gene069033.t1 |
| chr7.2 | exon | 34046188 | 34046351 | 34046188 | ID=MS.gene069033.t1.exon2;Parent=MS.gene069033.t1 |
| chr7.2 | CDS | 34046188 | 34046351 | 34046188 | ID=cds.MS.gene069033.t1;Parent=MS.gene069033.t1 |
| chr7.2 | exon | 34045136 | 34045786 | 34045136 | ID=MS.gene069033.t1.exon3;Parent=MS.gene069033.t1 |
| chr7.2 | CDS | 34045136 | 34045786 | 34045136 | ID=cds.MS.gene069033.t1;Parent=MS.gene069033.t1 |
| chr7.2 | exon | 34044925 | 34045042 | 34044925 | ID=MS.gene069033.t1.exon4;Parent=MS.gene069033.t1 |
| chr7.2 | CDS | 34044925 | 34045042 | 34044925 | ID=cds.MS.gene069033.t1;Parent=MS.gene069033.t1 |
| chr7.2 | exon | 34044639 | 34044827 | 34044639 | ID=MS.gene069033.t1.exon5;Parent=MS.gene069033.t1 |
| chr7.2 | CDS | 34044639 | 34044827 | 34044639 | ID=cds.MS.gene069033.t1;Parent=MS.gene069033.t1 |
| chr7.2 | exon | 34044380 | 34044550 | 34044380 | ID=MS.gene069033.t1.exon6;Parent=MS.gene069033.t1 |
| chr7.2 | CDS | 34044380 | 34044550 | 34044380 | ID=cds.MS.gene069033.t1;Parent=MS.gene069033.t1 |
| Gene Sequence |
| Protein sequence |
