Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069406.t1 | XP_013466170.1 | 97.7 | 426 | 9 | 1 | 1 | 425 | 1 | 426 | 2.80E-226 | 794.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069406.t1 | A0A072VF27 | 97.7 | 426 | 9 | 1 | 1 | 425 | 1 | 426 | 2.0e-226 | 794.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene053144 | MS.gene069406 | 0.836815 | 7.50E-57 | -1.69E-46 |
| MS.gene054584 | MS.gene069406 | 0.829263 | 5.68E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene69420 | MS.gene069406 | PPI |
| MS.gene24186 | MS.gene069406 | PPI |
| MS.gene014442 | MS.gene069406 | PPI |
| MS.gene35128 | MS.gene069406 | PPI |
| MS.gene42277 | MS.gene069406 | PPI |
| MS.gene27044 | MS.gene069406 | PPI |
| MS.gene064739 | MS.gene069406 | PPI |
| MS.gene64194 | MS.gene069406 | PPI |
| MS.gene023122 | MS.gene069406 | PPI |
| MS.gene36460 | MS.gene069406 | PPI |
| MS.gene069406 | MS.gene028330 | PPI |
| MS.gene63991 | MS.gene069406 | PPI |
| MS.gene069406 | MS.gene014442 | PPI |
| MS.gene069406 | MS.gene64194 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069406.t1 | MTR_1g024005 | 98.592 | 426 | 5 | 1 | 1 | 425 | 1 | 426 | 0.0 | 858 |
| MS.gene069406.t1 | MTR_3g113270 | 76.168 | 428 | 90 | 5 | 1 | 424 | 1 | 420 | 0.0 | 659 |
| MS.gene069406.t1 | MTR_3g071050 | 73.333 | 270 | 65 | 3 | 29 | 296 | 1 | 265 | 2.31e-140 | 402 |
| MS.gene069406.t1 | MTR_2g028610 | 37.383 | 428 | 231 | 8 | 30 | 423 | 34 | 458 | 2.44e-92 | 286 |
| MS.gene069406.t1 | MTR_2g028590 | 38.118 | 425 | 226 | 8 | 33 | 423 | 42 | 463 | 4.43e-92 | 286 |
| MS.gene069406.t1 | MTR_5g077710 | 44.127 | 315 | 162 | 7 | 119 | 424 | 76 | 385 | 1.08e-89 | 277 |
| MS.gene069406.t1 | MTR_8g028460 | 40.483 | 331 | 176 | 7 | 108 | 424 | 164 | 487 | 6.48e-80 | 255 |
| MS.gene069406.t1 | MTR_0010s0400 | 39.198 | 324 | 180 | 7 | 108 | 425 | 147 | 459 | 8.27e-78 | 249 |
| MS.gene069406.t1 | MTR_3g070620 | 76.471 | 136 | 29 | 2 | 227 | 360 | 54 | 188 | 2.63e-67 | 213 |
| MS.gene069406.t1 | MTR_4g094572 | 33.333 | 414 | 225 | 8 | 19 | 423 | 4 | 375 | 7.21e-65 | 213 |
| MS.gene069406.t1 | MTR_3g071100 | 68.293 | 41 | 12 | 1 | 207 | 247 | 24 | 63 | 1.03e-11 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069406.t1 | AT3G27230 | 72.941 | 425 | 100 | 4 | 1 | 425 | 1 | 410 | 0.0 | 632 |
| MS.gene069406.t1 | AT5G40830 | 69.718 | 426 | 114 | 5 | 1 | 424 | 1 | 413 | 0.0 | 612 |
| MS.gene069406.t1 | AT5G40830 | 69.718 | 426 | 114 | 5 | 1 | 424 | 1 | 413 | 0.0 | 612 |
| MS.gene069406.t1 | AT5G40830 | 63.380 | 426 | 101 | 5 | 1 | 424 | 1 | 373 | 0.0 | 541 |
| MS.gene069406.t1 | AT3G05390 | 32.969 | 458 | 241 | 12 | 23 | 425 | 16 | 462 | 1.01e-79 | 254 |
| MS.gene069406.t1 | AT4G01240 | 39.697 | 330 | 179 | 7 | 108 | 424 | 334 | 656 | 9.02e-75 | 246 |
| MS.gene069406.t1 | AT1G29790 | 41.554 | 296 | 153 | 6 | 131 | 423 | 98 | 376 | 7.66e-70 | 226 |
| MS.gene069406.t1 | AT1G29790 | 41.554 | 296 | 153 | 6 | 131 | 423 | 98 | 376 | 7.66e-70 | 226 |
Find 64 sgRNAs with CRISPR-Local
Find 86 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTCAGAAACTGATCTTAAA+AGG | 0.211099 | 1.1:-1005374 | MS.gene069406:CDS |
| TCAAACACATTGTCATAAAA+TGG | 0.248817 | 1.1:+1004900 | None:intergenic |
| GGTTCAGTTTCACTGAAAAT+TGG | 0.255151 | 1.1:-1005872 | MS.gene069406:CDS |
| GGAGAGAAAGTTGATAGTTT+TGG | 0.265881 | 1.1:-1004678 | MS.gene069406:CDS |
| TTTGATATTGGTGGTGGTTC+AGG | 0.273729 | 1.1:-1005056 | MS.gene069406:CDS |
| CTAAAGGAAGTTGATGTCTT+TGG | 0.285958 | 1.1:+1005528 | None:intergenic |
| TGCGGGCCGGTGGTTTGTTT+TGG | 0.291218 | 1.1:-1004794 | MS.gene069406:CDS |
| CTGGTGCTTGTCCTGATGAT+TGG | 0.293180 | 1.1:-1005403 | MS.gene069406:CDS |
| CAAAGACATCAACTTCCTTT+AGG | 0.332526 | 1.1:-1005527 | MS.gene069406:CDS |
| TTTACTTGAGCTTAGATCAT+AGG | 0.343285 | 1.1:-1004926 | MS.gene069406:CDS |
| GCAGCAATGAATTCACTAAA+TGG | 0.344054 | 1.1:+1004966 | None:intergenic |
| GGAAATGGTGGAATTAGAAT+AGG | 0.346150 | 1.1:-1005080 | MS.gene069406:CDS |
| TTCAGCTCATTTGCAATGTT+GGG | 0.356522 | 1.1:+1005560 | None:intergenic |
| CCATTCTTCAGAAACCAGTT+AGG | 0.362161 | 1.1:-1004626 | MS.gene069406:CDS |
| TTCATGAGTTACAAGGCTTC+TGG | 0.364603 | 1.1:-1005422 | MS.gene069406:CDS |
| GTTACTGTTGTTGGTGGTTG+TGG | 0.369532 | 1.1:+1005718 | None:intergenic |
| ATTAGAATAGGGTTTGATAT+TGG | 0.369699 | 1.1:-1005068 | MS.gene069406:CDS |
| TCTAACCTTCAACCCCTAAC+TGG | 0.373706 | 1.1:+1004612 | None:intergenic |
| GAAATGGTGGAATTAGAATA+GGG | 0.380459 | 1.1:-1005079 | MS.gene069406:CDS |
| TTGGATATAAGAAATTGAAA+TGG | 0.387064 | 1.1:-1004707 | MS.gene069406:CDS |
| ACAAGGTTGATTGAAAGGTT+TGG | 0.388153 | 1.1:-1004726 | MS.gene069406:CDS |
| TTAGGCAAGGATTCAAGAAC+TGG | 0.392044 | 1.1:-1005509 | MS.gene069406:CDS |
| TTTCAGCTCATTTGCAATGT+TGG | 0.396349 | 1.1:+1005559 | None:intergenic |
| TGGATATAAGAAATTGAAAT+GGG | 0.396901 | 1.1:-1004706 | MS.gene069406:CDS |
| AAGATTAAGGTTACTGTTGT+TGG | 0.413130 | 1.1:+1005709 | None:intergenic |
| AGAGGCTTCCAAAGAGAAAC+AGG | 0.426242 | 1.1:+1005284 | None:intergenic |
| GTTTCTCTTTGGAAGCCTCT+TGG | 0.431268 | 1.1:-1005281 | MS.gene069406:CDS |
| CTCTAACAAGGTTGATTGAA+AGG | 0.444624 | 1.1:-1004731 | MS.gene069406:CDS |
| TAAGAAATTGAAATGGGTTG+TGG | 0.451047 | 1.1:-1004700 | MS.gene069406:CDS |
| CATTCTTCAGAAACCAGTTA+GGG | 0.456557 | 1.1:-1004625 | MS.gene069406:CDS |
| AGAAACCAGTTAGGGGTTGA+AGG | 0.456670 | 1.1:-1004617 | None:intergenic |
| AAGAAATTGAAATGGGTTGT+GGG | 0.464176 | 1.1:-1004699 | MS.gene069406:CDS |
| AGCATAGAGAGCAAAGAGAT+TGG | 0.472679 | 1.1:+1005769 | None:intergenic |
| AAGGAAGTTGATGTCTTTGG+AGG | 0.474654 | 1.1:+1005531 | None:intergenic |
| AAACACCTTCTTCTTGGTAA+AGG | 0.474985 | 1.1:+1005344 | None:intergenic |
| GTTCTTGAATCCTTGCCTAA+AGG | 0.475247 | 1.1:+1005512 | None:intergenic |
| TGCATCAACATTAAGAGTAT+TGG | 0.482891 | 1.1:+1004989 | None:intergenic |
| CTCAGAAACTGATCTTAAAA+GGG | 0.485828 | 1.1:-1005373 | MS.gene069406:CDS |
| TGGAGGAAAAGCTGAAAAGT+TGG | 0.486068 | 1.1:-1004847 | MS.gene069406:CDS |
| AGAATAGGGTTTGATATTGG+TGG | 0.487533 | 1.1:-1005065 | MS.gene069406:CDS |
| AAGAACTGGGATCACTGAAA+TGG | 0.496871 | 1.1:-1005495 | MS.gene069406:CDS |
| TGATCTAAGCTCAAGTAAAG+TGG | 0.497485 | 1.1:+1004930 | None:intergenic |
| CCTAACTGGTTTCTGAAGAA+TGG | 0.500091 | 1.1:+1004626 | None:intergenic |
| ATAGGGTTTGATATTGGTGG+TGG | 0.514507 | 1.1:-1005062 | MS.gene069406:CDS |
| TGAGCTACACTCCAATCATC+AGG | 0.519786 | 1.1:+1005392 | None:intergenic |
| GATTCATGCATCAAGTGCAT+TGG | 0.520145 | 1.1:-1004874 | MS.gene069406:CDS |
| TCAAAAGAAACTAGCCCAGA+TGG | 0.525921 | 1.1:-1005624 | MS.gene069406:CDS |
| GTTTCACTGAAAATTGGAGA+TGG | 0.532703 | 1.1:-1005866 | MS.gene069406:CDS |
| GTCACAGTTCATGAGTTACA+AGG | 0.534645 | 1.1:-1005429 | MS.gene069406:CDS |
| TTCCAAAGAGAAACAGGAAA+AGG | 0.536142 | 1.1:+1005290 | None:intergenic |
| ATTAAGGTTACTGTTGTTGG+TGG | 0.540761 | 1.1:+1005712 | None:intergenic |
| ACATCAACTTCCTTTAGGCA+AGG | 0.546386 | 1.1:-1005522 | MS.gene069406:CDS |
| TGTTGTTGGTGGTTGTGGTG+TGG | 0.552926 | 1.1:+1005723 | None:intergenic |
| AGTGAATTCATTGCTGCTAG+AGG | 0.555907 | 1.1:-1004960 | MS.gene069406:CDS |
| GCATCAAGTGCATTGGATGT+TGG | 0.560273 | 1.1:-1004867 | MS.gene069406:CDS |
| GTGAGCCTTTACCAAGAAGA+AGG | 0.569775 | 1.1:-1005349 | MS.gene069406:CDS |
| ACTGAAATGGTGTCATCAGT+TGG | 0.572185 | 1.1:-1005482 | MS.gene069406:CDS |
| TTAAAAGTGTTATTACCAAG+AGG | 0.586025 | 1.1:+1005266 | None:intergenic |
| TGAGAATCAGAGATTTGTGA+AGG | 0.606302 | 1.1:-1005147 | MS.gene069406:CDS |
| ATCAAGCCAAAACAAACCAC+CGG | 0.614460 | 1.1:+1004788 | None:intergenic |
| TCAAGTGCATTGGATGTTGG+AGG | 0.648963 | 1.1:-1004864 | MS.gene069406:CDS |
| TAGGCAAGGATTCAAGAACT+GGG | 0.665439 | 1.1:-1005508 | MS.gene069406:CDS |
| AGAAGAAACAAACTCTAACA+AGG | 0.679763 | 1.1:-1004743 | MS.gene069406:CDS |
| ATTCTTCAGAAACCAGTTAG+GGG | 0.694148 | 1.1:-1004624 | MS.gene069406:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAAGTAAAAATGATTTTT+TGG | - | chr1.1:1005372-1005391 | MS.gene069406:CDS | 10.0% |
| !! | TGGATATAAGAAATTGAAAT+GGG | - | chr1.1:1005789-1005808 | MS.gene069406:CDS | 20.0% |
| !! | TTGGATATAAGAAATTGAAA+TGG | - | chr1.1:1005788-1005807 | MS.gene069406:CDS | 20.0% |
| !!! | TTGGTAATAACACTTTTAAT+TGG | - | chr1.1:1005233-1005252 | MS.gene069406:CDS | 20.0% |
| !!! | TTGTGTTAATTGTTTTGATT+TGG | - | chr1.1:1005312-1005331 | MS.gene069406:CDS | 20.0% |
| ! | ATTAGAATAGGGTTTGATAT+TGG | - | chr1.1:1005427-1005446 | MS.gene069406:CDS | 25.0% |
| ! | TCAAAAACTGTTTCAAAATC+AGG | - | chr1.1:1005175-1005194 | MS.gene069406:CDS | 25.0% |
| ! | TCAAACACATTGTCATAAAA+TGG | + | chr1.1:1005598-1005617 | None:intergenic | 25.0% |
| !!! | AAGAGTTTTGAATGTTTGAA+AGG | - | chr1.1:1005271-1005290 | MS.gene069406:CDS | 25.0% |
| !!! | AATAACACTTTTAATTGGAG+TGG | - | chr1.1:1005238-1005257 | MS.gene069406:CDS | 25.0% |
| !!! | AATTGTTTTGATTTGGTTAG+TGG | - | chr1.1:1005319-1005338 | MS.gene069406:CDS | 25.0% |
| !!! | AGATGTTTTTGTGAAGATTA+AGG | + | chr1.1:1004802-1004821 | None:intergenic | 25.0% |
| !!! | TTAAAAGTGTTATTACCAAG+AGG | + | chr1.1:1005232-1005251 | None:intergenic | 25.0% |
| AAGATTAAGGTTACTGTTGT+TGG | + | chr1.1:1004789-1004808 | None:intergenic | 30.0% | |
| AGAAGAAACAAACTCTAACA+AGG | - | chr1.1:1005752-1005771 | MS.gene069406:CDS | 30.0% | |
| CTCAGAAACTGATCTTAAAA+GGG | - | chr1.1:1005122-1005141 | MS.gene069406:CDS | 30.0% | |
| TTTACTTGAGCTTAGATCAT+AGG | - | chr1.1:1005569-1005588 | MS.gene069406:CDS | 30.0% | |
| TTTGAAAAACACCTTCTTCT+TGG | + | chr1.1:1005160-1005179 | None:intergenic | 30.0% | |
| ! | GAAATGGTGGAATTAGAATA+GGG | - | chr1.1:1005416-1005435 | MS.gene069406:CDS | 30.0% |
| ! | TGCATCAACATTAAGAGTAT+TGG | + | chr1.1:1005509-1005528 | None:intergenic | 30.0% |
| !! | AAGAAATTGAAATGGGTTGT+GGG | - | chr1.1:1005796-1005815 | MS.gene069406:CDS | 30.0% |
| !! | TAAGAAATTGAAATGGGTTG+TGG | - | chr1.1:1005795-1005814 | MS.gene069406:CDS | 30.0% |
| !!! | AAAGTTGATAGTTTTGGATC+AGG | - | chr1.1:1005823-1005842 | MS.gene069406:CDS | 30.0% |
| !!! | GATGTTTTAGCATTAGGAAA+TGG | - | chr1.1:1005400-1005419 | MS.gene069406:CDS | 30.0% |
| !!! | GTTGATGATGTTTTAGCATT+AGG | - | chr1.1:1005394-1005413 | MS.gene069406:CDS | 30.0% |
| AAACACCTTCTTCTTGGTAA+AGG | + | chr1.1:1005154-1005173 | None:intergenic | 35.0% | |
| AGAATAGGGTTTGATATTGG+TGG | - | chr1.1:1005430-1005449 | MS.gene069406:CDS | 35.0% | |
| ATTAAGGTTACTGTTGTTGG+TGG | + | chr1.1:1004786-1004805 | None:intergenic | 35.0% | |
| ATTCTTCAGAAACCAGTTAG+GGG | - | chr1.1:1005871-1005890 | MS.gene069406:CDS | 35.0% | |
| CAAAGACATCAACTTCCTTT+AGG | - | chr1.1:1004968-1004987 | MS.gene069406:CDS | 35.0% | |
| CATTCTTCAGAAACCAGTTA+GGG | - | chr1.1:1005870-1005889 | MS.gene069406:CDS | 35.0% | |
| GCAGCAATGAATTCACTAAA+TGG | + | chr1.1:1005532-1005551 | None:intergenic | 35.0% | |
| GCTCAGAAACTGATCTTAAA+AGG | - | chr1.1:1005121-1005140 | MS.gene069406:CDS | 35.0% | |
| GGTTCAGTTTCACTGAAAAT+TGG | - | chr1.1:1004623-1004642 | MS.gene069406:CDS | 35.0% | |
| GTTTCACTGAAAATTGGAGA+TGG | - | chr1.1:1004629-1004648 | MS.gene069406:CDS | 35.0% | |
| TCTTCACAAAAACATCTCTC+TGG | - | chr1.1:1004805-1004824 | MS.gene069406:CDS | 35.0% | |
| TGAGAATCAGAGATTTGTGA+AGG | - | chr1.1:1005348-1005367 | MS.gene069406:CDS | 35.0% | |
| TGATCTAAGCTCAAGTAAAG+TGG | + | chr1.1:1005568-1005587 | None:intergenic | 35.0% | |
| TTCAGCTCATTTGCAATGTT+GGG | + | chr1.1:1004938-1004957 | None:intergenic | 35.0% | |
| TTCCAAAGAGAAACAGGAAA+AGG | + | chr1.1:1005208-1005227 | None:intergenic | 35.0% | |
| TTTCAGCTCATTTGCAATGT+TGG | + | chr1.1:1004939-1004958 | None:intergenic | 35.0% | |
| ! | ACAAGGTTGATTGAAAGGTT+TGG | - | chr1.1:1005769-1005788 | MS.gene069406:CDS | 35.0% |
| ! | CTCTAACAAGGTTGATTGAA+AGG | - | chr1.1:1005764-1005783 | MS.gene069406:CDS | 35.0% |
| ! | GGAAATGGTGGAATTAGAAT+AGG | - | chr1.1:1005415-1005434 | MS.gene069406:CDS | 35.0% |
| ! | TTGATATCGATCGAGTTTTG+CGG | - | chr1.1:1005683-1005702 | MS.gene069406:CDS | 35.0% |
| !! | CTAAAGGAAGTTGATGTCTT+TGG | + | chr1.1:1004970-1004989 | None:intergenic | 35.0% |
| !! | GTTTTAGCATTAGGAAATGG+TGG | - | chr1.1:1005403-1005422 | MS.gene069406:CDS | 35.0% |
| !! | TTCCTTTTCCTGTTTCTCTT+TGG | - | chr1.1:1005203-1005222 | MS.gene069406:CDS | 35.0% |
| !!! | AAGAAGCTGTTTTTCCATCT+GGG | + | chr1.1:1004888-1004907 | None:intergenic | 35.0% |
| !!! | GGAGAGAAAGTTGATAGTTT+TGG | - | chr1.1:1005817-1005836 | MS.gene069406:CDS | 35.0% |
| !!! | TGTTTTGATTTGGTTAGTGG+TGG | - | chr1.1:1005322-1005341 | MS.gene069406:CDS | 35.0% |
| AAGAACTGGGATCACTGAAA+TGG | - | chr1.1:1005000-1005019 | MS.gene069406:CDS | 40.0% | |
| ACATCAACTTCCTTTAGGCA+AGG | - | chr1.1:1004973-1004992 | MS.gene069406:CDS | 40.0% | |
| AGCATAGAGAGCAAAGAGAT+TGG | + | chr1.1:1004729-1004748 | None:intergenic | 40.0% | |
| AGTGAATTCATTGCTGCTAG+AGG | - | chr1.1:1005535-1005554 | MS.gene069406:CDS | 40.0% | |
| ATAGGGTTTGATATTGGTGG+TGG | - | chr1.1:1005433-1005452 | MS.gene069406:CDS | 40.0% | |
| ATCAAGCCAAAACAAACCAC+CGG | + | chr1.1:1005710-1005729 | None:intergenic | 40.0% | |
| CAGATGGAAAAACAGCTTCT+TGG | - | chr1.1:1004887-1004906 | MS.gene069406:CDS | 40.0% | |
| CCATTCTTCAGAAACCAGTT+AGG | - | chr1.1:1005869-1005888 | MS.gene069406:CDS | 40.0% | |
| GATTCATGCATCAAGTGCAT+TGG | - | chr1.1:1005621-1005640 | MS.gene069406:CDS | 40.0% | |
| GTCACAGTTCATGAGTTACA+AGG | - | chr1.1:1005066-1005085 | MS.gene069406:CDS | 40.0% | |
| GTTCTTGAATCCTTGCCTAA+AGG | + | chr1.1:1004986-1005005 | None:intergenic | 40.0% | |
| TAGGCAAGGATTCAAGAACT+GGG | - | chr1.1:1004987-1005006 | MS.gene069406:CDS | 40.0% | |
| TCAAAAGAAACTAGCCCAGA+TGG | - | chr1.1:1004871-1004890 | MS.gene069406:CDS | 40.0% | |
| TGGAGGAAAAGCTGAAAAGT+TGG | - | chr1.1:1005648-1005667 | MS.gene069406:CDS | 40.0% | |
| TTAGGCAAGGATTCAAGAAC+TGG | - | chr1.1:1004986-1005005 | MS.gene069406:CDS | 40.0% | |
| TTCATGAGTTACAAGGCTTC+TGG | - | chr1.1:1005073-1005092 | MS.gene069406:CDS | 40.0% | |
| ! | CCTAACTGGTTTCTGAAGAA+TGG | + | chr1.1:1005872-1005891 | None:intergenic | 40.0% |
| ! | TGATATCGATCGAGTTTTGC+GGG | - | chr1.1:1005684-1005703 | MS.gene069406:CDS | 40.0% |
| !! | AAGGAAGTTGATGTCTTTGG+AGG | + | chr1.1:1004967-1004986 | None:intergenic | 40.0% |
| !! | ACTGAAATGGTGTCATCAGT+TGG | - | chr1.1:1005013-1005032 | MS.gene069406:CDS | 40.0% |
| !! | TTTGATATTGGTGGTGGTTC+AGG | - | chr1.1:1005439-1005458 | MS.gene069406:CDS | 40.0% |
| !!! | CAAGAAGCTGTTTTTCCATC+TGG | + | chr1.1:1004889-1004908 | None:intergenic | 40.0% |
| AGAGGCTTCCAAAGAGAAAC+AGG | + | chr1.1:1005214-1005233 | None:intergenic | 45.0% | |
| GCATCAAGTGCATTGGATGT+TGG | - | chr1.1:1005628-1005647 | MS.gene069406:CDS | 45.0% | |
| GTGAGCCTTTACCAAGAAGA+AGG | - | chr1.1:1005146-1005165 | MS.gene069406:CDS | 45.0% | |
| TCAAGTGCATTGGATGTTGG+AGG | - | chr1.1:1005631-1005650 | MS.gene069406:CDS | 45.0% | |
| TGAGCTACACTCCAATCATC+AGG | + | chr1.1:1005106-1005125 | None:intergenic | 45.0% | |
| ! | GTTTCTCTTTGGAAGCCTCT+TGG | - | chr1.1:1005214-1005233 | MS.gene069406:CDS | 45.0% |
| !! | GTTACTGTTGTTGGTGGTTG+TGG | + | chr1.1:1004780-1004799 | None:intergenic | 45.0% |
| !!! | GGTTGTGGTGTGGTTTTTTG+AGG | + | chr1.1:1004765-1004784 | None:intergenic | 45.0% |
| CTGGTGCTTGTCCTGATGAT+TGG | - | chr1.1:1005092-1005111 | MS.gene069406:CDS | 50.0% | |
| !! | TGTTGTTGGTGGTTGTGGTG+TGG | + | chr1.1:1004775-1004794 | None:intergenic | 50.0% |
| ! | ATCGATCGAGTTTTGCGGGC+CGG | - | chr1.1:1005688-1005707 | MS.gene069406:CDS | 55.0% |
| !!! | TGCGGGCCGGTGGTTTGTTT+TGG | - | chr1.1:1005701-1005720 | MS.gene069406:CDS | 60.0% |
| ! | GATCGAGTTTTGCGGGCCGG+TGG | - | chr1.1:1005691-1005710 | MS.gene069406:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 1004620 | 1005897 | 1004620 | ID=MS.gene069406 |
| chr1.1 | mRNA | 1004620 | 1005897 | 1004620 | ID=MS.gene069406.t1;Parent=MS.gene069406 |
| chr1.1 | exon | 1004620 | 1005897 | 1004620 | ID=MS.gene069406.t1.exon1;Parent=MS.gene069406.t1 |
| chr1.1 | CDS | 1004620 | 1005897 | 1004620 | ID=cds.MS.gene069406.t1;Parent=MS.gene069406.t1 |
| Gene Sequence |
| Protein sequence |
