Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24186.t1 | XP_013466170.1 | 98.1 | 426 | 8 | 0 | 1 | 426 | 1 | 426 | 4.80E-226 | 793.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24186.t1 | A0A072VF27 | 98.1 | 426 | 8 | 0 | 1 | 426 | 1 | 426 | 3.5e-226 | 793.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene69420 | MS.gene24186 | PPI |
| MS.gene24186 | MS.gene069406 | PPI |
| MS.gene42277 | MS.gene24186 | PPI |
| MS.gene27044 | MS.gene24186 | PPI |
| MS.gene064739 | MS.gene24186 | PPI |
| MS.gene24186 | MS.gene028330 | PPI |
| MS.gene24186 | MS.gene35128 | PPI |
| MS.gene023122 | MS.gene24186 | PPI |
| MS.gene24186 | MS.gene69420 | PPI |
| MS.gene63991 | MS.gene24186 | PPI |
| MS.gene36460 | MS.gene24186 | PPI |
| MS.gene24186 | MS.gene014442 | PPI |
| MS.gene24186 | MS.gene64194 | PPI |
| MS.gene24186 | MS.gene63991 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24186.t1 | MTR_1g024005 | 97.887 | 426 | 9 | 0 | 1 | 426 | 1 | 426 | 0.0 | 856 |
| MS.gene24186.t1 | MTR_3g113270 | 75.758 | 429 | 91 | 5 | 1 | 425 | 1 | 420 | 0.0 | 655 |
| MS.gene24186.t1 | MTR_3g071050 | 72.694 | 271 | 66 | 3 | 29 | 297 | 1 | 265 | 2.05e-139 | 400 |
| MS.gene24186.t1 | MTR_2g028590 | 44.720 | 322 | 169 | 5 | 109 | 424 | 145 | 463 | 1.42e-91 | 284 |
| MS.gene24186.t1 | MTR_2g028610 | 37.063 | 429 | 232 | 9 | 30 | 424 | 34 | 458 | 4.97e-91 | 283 |
| MS.gene24186.t1 | MTR_5g077710 | 43.810 | 315 | 163 | 7 | 120 | 425 | 76 | 385 | 3.05e-89 | 276 |
| MS.gene24186.t1 | MTR_8g028460 | 41.088 | 331 | 174 | 7 | 109 | 425 | 164 | 487 | 2.81e-80 | 256 |
| MS.gene24186.t1 | MTR_0010s0400 | 39.198 | 324 | 180 | 7 | 109 | 426 | 147 | 459 | 1.32e-77 | 248 |
| MS.gene24186.t1 | MTR_3g070620 | 76.471 | 136 | 29 | 2 | 228 | 361 | 54 | 188 | 2.48e-67 | 213 |
| MS.gene24186.t1 | MTR_4g094572 | 33.012 | 415 | 226 | 8 | 19 | 424 | 4 | 375 | 2.87e-64 | 211 |
| MS.gene24186.t1 | MTR_3g071100 | 68.293 | 41 | 12 | 1 | 208 | 248 | 24 | 63 | 1.09e-11 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24186.t1 | AT3G27230 | 72.300 | 426 | 102 | 3 | 1 | 426 | 1 | 410 | 0.0 | 629 |
| MS.gene24186.t1 | AT5G40830 | 69.393 | 428 | 113 | 6 | 1 | 425 | 1 | 413 | 0.0 | 607 |
| MS.gene24186.t1 | AT5G40830 | 69.393 | 428 | 113 | 6 | 1 | 425 | 1 | 413 | 0.0 | 607 |
| MS.gene24186.t1 | AT5G40830 | 63.084 | 428 | 100 | 6 | 1 | 425 | 1 | 373 | 0.0 | 537 |
| MS.gene24186.t1 | AT3G05390 | 32.969 | 458 | 242 | 11 | 23 | 426 | 16 | 462 | 2.15e-79 | 253 |
| MS.gene24186.t1 | AT4G01240 | 40.000 | 330 | 178 | 7 | 109 | 425 | 334 | 656 | 7.23e-75 | 246 |
| MS.gene24186.t1 | AT1G29790 | 33.416 | 404 | 232 | 9 | 24 | 424 | 7 | 376 | 1.85e-69 | 224 |
| MS.gene24186.t1 | AT1G29790 | 33.416 | 404 | 232 | 9 | 24 | 424 | 7 | 376 | 1.85e-69 | 224 |
Find 60 sgRNAs with CRISPR-Local
Find 81 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTCAGAAACTGATCTTAAA+AGG | 0.211099 | 1.2:-1337321 | MS.gene24186:CDS |
| TCAAACACATTGTCATAAAA+TGG | 0.248817 | 1.2:+1336847 | None:intergenic |
| AGAAACCAGTTAGGGGTTAA+AGG | 0.250275 | 1.2:-1336564 | None:intergenic |
| GGTTCAGTTTCACTGAAAAT+TGG | 0.255151 | 1.2:-1337822 | MS.gene24186:CDS |
| GGAGAGAAAGTTGATAGTTT+TGG | 0.265881 | 1.2:-1336625 | MS.gene24186:CDS |
| TTTGATATTGGTGGTGGTTC+AGG | 0.273729 | 1.2:-1337003 | MS.gene24186:CDS |
| CTAAAGGAAGTTGATGTCTT+TGG | 0.285958 | 1.2:+1337475 | None:intergenic |
| CTGGTGCTTGTCCTGATGAT+TGG | 0.293180 | 1.2:-1337350 | MS.gene24186:CDS |
| TGCGGGCCGGTGGTTTGTTT+TGG | 0.299687 | 1.2:-1336741 | MS.gene24186:CDS |
| CAAAGACATCAACTTCCTTT+AGG | 0.332526 | 1.2:-1337474 | MS.gene24186:CDS |
| TTTACTTGAGCTTAGATCAT+AGG | 0.343285 | 1.2:-1336873 | MS.gene24186:CDS |
| GCAGCAATGAATTCACTAAA+TGG | 0.344054 | 1.2:+1336913 | None:intergenic |
| GGAAATGGTGGAATTAGAAT+AGG | 0.346150 | 1.2:-1337027 | MS.gene24186:CDS |
| CTGTTCTTCAGAAACCAGTT+AGG | 0.347883 | 1.2:-1336573 | MS.gene24186:CDS |
| ACAAAGTTGATTGAAAGGTT+TGG | 0.356071 | 1.2:-1336673 | MS.gene24186:CDS |
| TTCAGCTCATTTGCAATGTT+GGG | 0.356522 | 1.2:+1337507 | None:intergenic |
| TTCATGAGTTACAAGGCTTC+TGG | 0.364603 | 1.2:-1337369 | MS.gene24186:CDS |
| CCTAACCTTTAACCCCTAAC+TGG | 0.366164 | 1.2:+1336559 | None:intergenic |
| ATTAGAATAGGGTTTGATAT+TGG | 0.369699 | 1.2:-1337015 | MS.gene24186:CDS |
| GAAATGGTGGAATTAGAATA+GGG | 0.380459 | 1.2:-1337026 | MS.gene24186:CDS |
| TTGGATATAAGAAATTGAAA+TGG | 0.387064 | 1.2:-1336654 | MS.gene24186:CDS |
| TTAGGCAAGGATTCAAGAAC+TGG | 0.392044 | 1.2:-1337456 | MS.gene24186:CDS |
| TTTCAGCTCATTTGCAATGT+TGG | 0.396349 | 1.2:+1337506 | None:intergenic |
| TGGATATAAGAAATTGAAAT+GGG | 0.396901 | 1.2:-1336653 | MS.gene24186:CDS |
| ACTGTTGTTGTTGGTGGTTG+TGG | 0.402189 | 1.2:+1337668 | None:intergenic |
| AGAGGCTTCCAAAGAGAAAC+AGG | 0.426242 | 1.2:+1337231 | None:intergenic |
| GTTTCTCTTTGGAAGCCTCT+TGG | 0.431268 | 1.2:-1337228 | MS.gene24186:CDS |
| AAGGTTACTGTTGTTGTTGG+TGG | 0.444379 | 1.2:+1337662 | None:intergenic |
| TAAGAAATTGAAATGGGTTG+TGG | 0.451047 | 1.2:-1336647 | MS.gene24186:CDS |
| ATTAAGGTTACTGTTGTTGT+TGG | 0.452349 | 1.2:+1337659 | None:intergenic |
| AAGAAATTGAAATGGGTTGT+GGG | 0.464176 | 1.2:-1336646 | MS.gene24186:CDS |
| TGTTCTTCAGAAACCAGTTA+GGG | 0.468058 | 1.2:-1336572 | MS.gene24186:CDS |
| AAGGAAGTTGATGTCTTTGG+AGG | 0.474654 | 1.2:+1337478 | None:intergenic |
| AAACACCTTCTTCTTGGTAA+AGG | 0.474985 | 1.2:+1337291 | None:intergenic |
| GTTCTTGAATCCTTGCCTAA+AGG | 0.475247 | 1.2:+1337459 | None:intergenic |
| CTCTAACAAAGTTGATTGAA+AGG | 0.480902 | 1.2:-1336678 | MS.gene24186:CDS |
| CTCAGAAACTGATCTTAAAA+GGG | 0.485828 | 1.2:-1337320 | MS.gene24186:CDS |
| TGGAGGAAAAGCTGAAAAGT+TGG | 0.486068 | 1.2:-1336794 | MS.gene24186:CDS |
| AGAATAGGGTTTGATATTGG+TGG | 0.487533 | 1.2:-1337012 | MS.gene24186:CDS |
| AAGAACTGGGATCACTGAAA+TGG | 0.496871 | 1.2:-1337442 | MS.gene24186:CDS |
| TGATCTAAGCTCAAGTAAAG+TGG | 0.497485 | 1.2:+1336877 | None:intergenic |
| ATAGGGTTTGATATTGGTGG+TGG | 0.514507 | 1.2:-1337009 | MS.gene24186:CDS |
| TGAGCTACACTCCAATCATC+AGG | 0.519786 | 1.2:+1337339 | None:intergenic |
| GATTCATGCATCAAGTGCAT+TGG | 0.520145 | 1.2:-1336821 | MS.gene24186:CDS |
| TCAAAAGAAACTAGCCCAGA+TGG | 0.525921 | 1.2:-1337571 | MS.gene24186:CDS |
| GTTTCACTGAAAATTGGAGA+TGG | 0.532703 | 1.2:-1337816 | MS.gene24186:CDS |
| GTCACAGTTCATGAGTTACA+AGG | 0.534645 | 1.2:-1337376 | MS.gene24186:CDS |
| TTCCAAAGAGAAACAGGAAA+AGG | 0.536142 | 1.2:+1337237 | None:intergenic |
| ACATCAACTTCCTTTAGGCA+AGG | 0.546386 | 1.2:-1337469 | MS.gene24186:CDS |
| AGTGAATTCATTGCTGCTAG+AGG | 0.555907 | 1.2:-1336907 | MS.gene24186:CDS |
| GCATCAAGTGCATTGGATGT+TGG | 0.560273 | 1.2:-1336814 | MS.gene24186:CDS |
| GTGAGCCTTTACCAAGAAGA+AGG | 0.569775 | 1.2:-1337296 | MS.gene24186:CDS |
| ACTGAAATGGTGTCATCAGT+TGG | 0.572185 | 1.2:-1337429 | MS.gene24186:CDS |
| TTAAAAGTGTTATTACCAAG+AGG | 0.586025 | 1.2:+1337213 | None:intergenic |
| TGTTGTTGGTGGTTGTGGTG+TGG | 0.595503 | 1.2:+1337673 | None:intergenic |
| TGAGAATCAGAGATTTGTGA+AGG | 0.606302 | 1.2:-1337094 | MS.gene24186:CDS |
| ATCAAACCAAAACAAACCAC+CGG | 0.608513 | 1.2:+1336735 | None:intergenic |
| TCAAGTGCATTGGATGTTGG+AGG | 0.648963 | 1.2:-1336811 | MS.gene24186:CDS |
| TAGGCAAGGATTCAAGAACT+GGG | 0.665439 | 1.2:-1337455 | MS.gene24186:CDS |
| GTTCTTCAGAAACCAGTTAG+GGG | 0.683618 | 1.2:-1336571 | MS.gene24186:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAAGTAAAAATGATTTTT+TGG | - | chr1.2:1337322-1337341 | MS.gene24186:CDS | 10.0% |
| !! | TGGATATAAGAAATTGAAAT+GGG | - | chr1.2:1337739-1337758 | MS.gene24186:CDS | 20.0% |
| !! | TTGGATATAAGAAATTGAAA+TGG | - | chr1.2:1337738-1337757 | MS.gene24186:CDS | 20.0% |
| !!! | TTGGTAATAACACTTTTAAT+TGG | - | chr1.2:1337183-1337202 | MS.gene24186:CDS | 20.0% |
| !!! | TTGTGTTAATTGTTTTGATT+TGG | - | chr1.2:1337262-1337281 | MS.gene24186:CDS | 20.0% |
| ! | ATTAGAATAGGGTTTGATAT+TGG | - | chr1.2:1337377-1337396 | MS.gene24186:CDS | 25.0% |
| ! | TCAAAAACTGTTTCAAAATC+AGG | - | chr1.2:1337125-1337144 | MS.gene24186:CDS | 25.0% |
| ! | TCAAACACATTGTCATAAAA+TGG | + | chr1.2:1337548-1337567 | None:intergenic | 25.0% |
| !!! | AAGAGTTTTGAATGTTTGAA+AGG | - | chr1.2:1337221-1337240 | MS.gene24186:CDS | 25.0% |
| !!! | AATAACACTTTTAATTGGAG+TGG | - | chr1.2:1337188-1337207 | MS.gene24186:CDS | 25.0% |
| !!! | AATTGTTTTGATTTGGTTAG+TGG | - | chr1.2:1337269-1337288 | MS.gene24186:CDS | 25.0% |
| !!! | AGATGTTTTTGTGAAGATTA+AGG | + | chr1.2:1336752-1336771 | None:intergenic | 25.0% |
| !!! | TTAAAAGTGTTATTACCAAG+AGG | + | chr1.2:1337182-1337201 | None:intergenic | 25.0% |
| ATTAAGGTTACTGTTGTTGT+TGG | + | chr1.2:1336736-1336755 | None:intergenic | 30.0% | |
| CTCAGAAACTGATCTTAAAA+GGG | - | chr1.2:1337072-1337091 | MS.gene24186:CDS | 30.0% | |
| TTTACTTGAGCTTAGATCAT+AGG | - | chr1.2:1337519-1337538 | MS.gene24186:CDS | 30.0% | |
| TTTGAAAAACACCTTCTTCT+TGG | + | chr1.2:1337110-1337129 | None:intergenic | 30.0% | |
| ! | ACAAAGTTGATTGAAAGGTT+TGG | - | chr1.2:1337719-1337738 | MS.gene24186:CDS | 30.0% |
| ! | CTCTAACAAAGTTGATTGAA+AGG | - | chr1.2:1337714-1337733 | MS.gene24186:CDS | 30.0% |
| ! | GAAATGGTGGAATTAGAATA+GGG | - | chr1.2:1337366-1337385 | MS.gene24186:CDS | 30.0% |
| !! | AAGAAATTGAAATGGGTTGT+GGG | - | chr1.2:1337746-1337765 | MS.gene24186:CDS | 30.0% |
| !! | TAAGAAATTGAAATGGGTTG+TGG | - | chr1.2:1337745-1337764 | MS.gene24186:CDS | 30.0% |
| !!! | AAAGTTGATAGTTTTGGATC+AGG | - | chr1.2:1337773-1337792 | MS.gene24186:CDS | 30.0% |
| !!! | GATGTTTTAGCATTAGGAAA+TGG | - | chr1.2:1337350-1337369 | MS.gene24186:CDS | 30.0% |
| !!! | GTTGATGATGTTTTAGCATT+AGG | - | chr1.2:1337344-1337363 | MS.gene24186:CDS | 30.0% |
| AAACACCTTCTTCTTGGTAA+AGG | + | chr1.2:1337104-1337123 | None:intergenic | 35.0% | |
| AGAATAGGGTTTGATATTGG+TGG | - | chr1.2:1337380-1337399 | MS.gene24186:CDS | 35.0% | |
| ATCAAACCAAAACAAACCAC+CGG | + | chr1.2:1337660-1337679 | None:intergenic | 35.0% | |
| CAAAGACATCAACTTCCTTT+AGG | - | chr1.2:1336918-1336937 | MS.gene24186:CDS | 35.0% | |
| GCAGCAATGAATTCACTAAA+TGG | + | chr1.2:1337482-1337501 | None:intergenic | 35.0% | |
| GCTCAGAAACTGATCTTAAA+AGG | - | chr1.2:1337071-1337090 | MS.gene24186:CDS | 35.0% | |
| GGTTCAGTTTCACTGAAAAT+TGG | - | chr1.2:1336570-1336589 | MS.gene24186:CDS | 35.0% | |
| GTTTCACTGAAAATTGGAGA+TGG | - | chr1.2:1336576-1336595 | MS.gene24186:CDS | 35.0% | |
| TGAGAATCAGAGATTTGTGA+AGG | - | chr1.2:1337298-1337317 | MS.gene24186:CDS | 35.0% | |
| TGATCTAAGCTCAAGTAAAG+TGG | + | chr1.2:1337518-1337537 | None:intergenic | 35.0% | |
| TGTTCTTCAGAAACCAGTTA+GGG | - | chr1.2:1337820-1337839 | MS.gene24186:CDS | 35.0% | |
| TTCAGCTCATTTGCAATGTT+GGG | + | chr1.2:1336888-1336907 | None:intergenic | 35.0% | |
| TTCCAAAGAGAAACAGGAAA+AGG | + | chr1.2:1337158-1337177 | None:intergenic | 35.0% | |
| TTTCAGCTCATTTGCAATGT+TGG | + | chr1.2:1336889-1336908 | None:intergenic | 35.0% | |
| ! | GGAAATGGTGGAATTAGAAT+AGG | - | chr1.2:1337365-1337384 | MS.gene24186:CDS | 35.0% |
| ! | TTGATATCGATCGAGTTTTG+CGG | - | chr1.2:1337633-1337652 | MS.gene24186:CDS | 35.0% |
| !! | CTAAAGGAAGTTGATGTCTT+TGG | + | chr1.2:1336920-1336939 | None:intergenic | 35.0% |
| !! | GTTTTAGCATTAGGAAATGG+TGG | - | chr1.2:1337353-1337372 | MS.gene24186:CDS | 35.0% |
| !! | TTCCTTTTCCTGTTTCTCTT+TGG | - | chr1.2:1337153-1337172 | MS.gene24186:CDS | 35.0% |
| !!! | AAGAAGCTGTTTTTCCATCT+GGG | + | chr1.2:1336838-1336857 | None:intergenic | 35.0% |
| !!! | GGAGAGAAAGTTGATAGTTT+TGG | - | chr1.2:1337767-1337786 | MS.gene24186:CDS | 35.0% |
| !!! | TGTTTTGATTTGGTTAGTGG+TGG | - | chr1.2:1337272-1337291 | MS.gene24186:CDS | 35.0% |
| AAGAACTGGGATCACTGAAA+TGG | - | chr1.2:1336950-1336969 | MS.gene24186:CDS | 40.0% | |
| ACATCAACTTCCTTTAGGCA+AGG | - | chr1.2:1336923-1336942 | MS.gene24186:CDS | 40.0% | |
| AGTGAATTCATTGCTGCTAG+AGG | - | chr1.2:1337485-1337504 | MS.gene24186:CDS | 40.0% | |
| ATAGGGTTTGATATTGGTGG+TGG | - | chr1.2:1337383-1337402 | MS.gene24186:CDS | 40.0% | |
| CAGATGGAAAAACAGCTTCT+TGG | - | chr1.2:1336837-1336856 | MS.gene24186:CDS | 40.0% | |
| CTGTTCTTCAGAAACCAGTT+AGG | - | chr1.2:1337819-1337838 | MS.gene24186:CDS | 40.0% | |
| GATTCATGCATCAAGTGCAT+TGG | - | chr1.2:1337571-1337590 | MS.gene24186:CDS | 40.0% | |
| GTCACAGTTCATGAGTTACA+AGG | - | chr1.2:1337016-1337035 | MS.gene24186:CDS | 40.0% | |
| GTTCTTCAGAAACCAGTTAG+GGG | - | chr1.2:1337821-1337840 | MS.gene24186:CDS | 40.0% | |
| GTTCTTGAATCCTTGCCTAA+AGG | + | chr1.2:1336936-1336955 | None:intergenic | 40.0% | |
| TAGGCAAGGATTCAAGAACT+GGG | - | chr1.2:1336937-1336956 | MS.gene24186:CDS | 40.0% | |
| TCAAAAGAAACTAGCCCAGA+TGG | - | chr1.2:1336821-1336840 | MS.gene24186:CDS | 40.0% | |
| TGGAGGAAAAGCTGAAAAGT+TGG | - | chr1.2:1337598-1337617 | MS.gene24186:CDS | 40.0% | |
| TTAGGCAAGGATTCAAGAAC+TGG | - | chr1.2:1336936-1336955 | MS.gene24186:CDS | 40.0% | |
| TTCATGAGTTACAAGGCTTC+TGG | - | chr1.2:1337023-1337042 | MS.gene24186:CDS | 40.0% | |
| ! | AAGGTTACTGTTGTTGTTGG+TGG | + | chr1.2:1336733-1336752 | None:intergenic | 40.0% |
| ! | TGATATCGATCGAGTTTTGC+GGG | - | chr1.2:1337634-1337653 | MS.gene24186:CDS | 40.0% |
| !! | AAGGAAGTTGATGTCTTTGG+AGG | + | chr1.2:1336917-1336936 | None:intergenic | 40.0% |
| !! | ACTGAAATGGTGTCATCAGT+TGG | - | chr1.2:1336963-1336982 | MS.gene24186:CDS | 40.0% |
| !! | TTTGATATTGGTGGTGGTTC+AGG | - | chr1.2:1337389-1337408 | MS.gene24186:CDS | 40.0% |
| !!! | CAAGAAGCTGTTTTTCCATC+TGG | + | chr1.2:1336839-1336858 | None:intergenic | 40.0% |
| AGAGGCTTCCAAAGAGAAAC+AGG | + | chr1.2:1337164-1337183 | None:intergenic | 45.0% | |
| GCATCAAGTGCATTGGATGT+TGG | - | chr1.2:1337578-1337597 | MS.gene24186:CDS | 45.0% | |
| GTGAGCCTTTACCAAGAAGA+AGG | - | chr1.2:1337096-1337115 | MS.gene24186:CDS | 45.0% | |
| TCAAGTGCATTGGATGTTGG+AGG | - | chr1.2:1337581-1337600 | MS.gene24186:CDS | 45.0% | |
| TGAGCTACACTCCAATCATC+AGG | + | chr1.2:1337056-1337075 | None:intergenic | 45.0% | |
| ! | GTTTCTCTTTGGAAGCCTCT+TGG | - | chr1.2:1337164-1337183 | MS.gene24186:CDS | 45.0% |
| !! | ACTGTTGTTGTTGGTGGTTG+TGG | + | chr1.2:1336727-1336746 | None:intergenic | 45.0% |
| CTGGTGCTTGTCCTGATGAT+TGG | - | chr1.2:1337042-1337061 | MS.gene24186:CDS | 50.0% | |
| ! | GGTTGTGGTGTGGCTTTTTG+AGG | + | chr1.2:1336712-1336731 | None:intergenic | 50.0% |
| !! | TGTTGTTGGTGGTTGTGGTG+TGG | + | chr1.2:1336722-1336741 | None:intergenic | 50.0% |
| ! | ATCGATCGAGTTTTGCGGGC+CGG | - | chr1.2:1337638-1337657 | MS.gene24186:CDS | 55.0% |
| !!! | TGCGGGCCGGTGGTTTGTTT+TGG | - | chr1.2:1337651-1337670 | MS.gene24186:CDS | 60.0% |
| ! | GATCGAGTTTTGCGGGCCGG+TGG | - | chr1.2:1337641-1337660 | MS.gene24186:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 1336567 | 1337847 | 1336567 | ID=MS.gene24186 |
| chr1.2 | mRNA | 1336567 | 1337847 | 1336567 | ID=MS.gene24186.t1;Parent=MS.gene24186 |
| chr1.2 | exon | 1336567 | 1337847 | 1336567 | ID=MS.gene24186.t1.exon1;Parent=MS.gene24186.t1 |
| chr1.2 | CDS | 1336567 | 1337847 | 1336567 | ID=cds.MS.gene24186.t1;Parent=MS.gene24186.t1 |
| Gene Sequence |
| Protein sequence |
