Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69420.t1 | XP_013462202.1 | 97.4 | 421 | 11 | 0 | 1 | 421 | 1 | 421 | 5.10E-236 | 826.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69420.t1 | A0A072V314 | 97.4 | 421 | 11 | 0 | 1 | 421 | 1 | 421 | 3.7e-236 | 826.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049260 | MS.gene69420 | 0.817826 | 2.70E-52 | -1.69E-46 |
| MS.gene049758 | MS.gene69420 | 0.831221 | 1.89E-55 | -1.69E-46 |
| MS.gene050301 | MS.gene69420 | 0.804552 | 2.05E-49 | -1.69E-46 |
| MS.gene050438 | MS.gene69420 | 0.834773 | 2.47E-56 | -1.69E-46 |
| MS.gene050558 | MS.gene69420 | 0.823548 | 1.31E-53 | -1.69E-46 |
| MS.gene050560 | MS.gene69420 | 0.802804 | 4.72E-49 | -1.69E-46 |
| MS.gene051663 | MS.gene69420 | 0.807819 | 4.20E-50 | -1.69E-46 |
| MS.gene051860 | MS.gene69420 | 0.815626 | 8.39E-52 | -1.69E-46 |
| MS.gene052207 | MS.gene69420 | 0.849665 | 2.79E-60 | -1.69E-46 |
| MS.gene053836 | MS.gene69420 | 0.839363 | 1.66E-57 | -1.69E-46 |
| MS.gene054473 | MS.gene69420 | 0.816664 | 4.92E-52 | -1.69E-46 |
| MS.gene054942 | MS.gene69420 | 0.820956 | 5.22E-53 | -1.69E-46 |
| MS.gene055390 | MS.gene69420 | 0.819406 | 1.18E-52 | -1.69E-46 |
| MS.gene055422 | MS.gene69420 | 0.82291 | 1.84E-53 | -1.69E-46 |
| MS.gene056069 | MS.gene69420 | -0.805436 | 1.34E-49 | -1.69E-46 |
| MS.gene057121 | MS.gene69420 | 0.812179 | 4.83E-51 | -1.69E-46 |
| MS.gene057260 | MS.gene69420 | 0.809579 | 1.77E-50 | -1.69E-46 |
| MS.gene057469 | MS.gene69420 | 0.834315 | 3.22E-56 | -1.69E-46 |
| MS.gene05811 | MS.gene69420 | 0.81705 | 4.03E-52 | -1.69E-46 |
| MS.gene060476 | MS.gene69420 | 0.802837 | 4.64E-49 | -1.69E-46 |
| MS.gene060480 | MS.gene69420 | 0.800246 | 1.58E-48 | -1.69E-46 |
| MS.gene060559 | MS.gene69420 | 0.802123 | 6.51E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene69420 | MS.gene24186 | PPI |
| MS.gene69420 | MS.gene069406 | PPI |
| MS.gene36460 | MS.gene69420 | PPI |
| MS.gene63991 | MS.gene69420 | PPI |
| MS.gene69420 | MS.gene35128 | PPI |
| MS.gene69420 | MS.gene028330 | PPI |
| MS.gene24186 | MS.gene69420 | PPI |
| MS.gene69420 | MS.gene014442 | PPI |
| MS.gene69420 | MS.gene64194 | PPI |
| MS.gene42277 | MS.gene69420 | PPI |
| MS.gene27044 | MS.gene69420 | PPI |
| MS.gene023122 | MS.gene69420 | PPI |
| MS.gene69420 | MS.gene63991 | PPI |
| MS.gene064739 | MS.gene69420 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69420.t1 | MTR_3g113270 | 97.387 | 421 | 11 | 0 | 1 | 421 | 1 | 421 | 0.0 | 848 |
| MS.gene69420.t1 | MTR_1g024005 | 76.457 | 429 | 88 | 5 | 1 | 420 | 1 | 425 | 0.0 | 656 |
| MS.gene69420.t1 | MTR_3g071050 | 97.358 | 265 | 7 | 0 | 29 | 293 | 1 | 265 | 0.0 | 540 |
| MS.gene69420.t1 | MTR_3g070620 | 97.037 | 135 | 4 | 0 | 225 | 359 | 54 | 188 | 2.49e-91 | 274 |
| MS.gene69420.t1 | MTR_2g028590 | 40.053 | 377 | 208 | 8 | 56 | 419 | 92 | 463 | 5.20e-89 | 278 |
| MS.gene69420.t1 | MTR_2g028610 | 37.123 | 431 | 224 | 11 | 30 | 419 | 34 | 458 | 9.37e-89 | 277 |
| MS.gene69420.t1 | MTR_5g077710 | 42.722 | 316 | 169 | 8 | 113 | 420 | 74 | 385 | 1.64e-86 | 269 |
| MS.gene69420.t1 | MTR_8g028460 | 40.785 | 331 | 175 | 7 | 104 | 420 | 164 | 487 | 4.02e-82 | 261 |
| MS.gene69420.t1 | MTR_0010s0400 | 41.667 | 324 | 172 | 9 | 104 | 421 | 147 | 459 | 6.35e-82 | 259 |
| MS.gene69420.t1 | MTR_4g094572 | 32.847 | 411 | 227 | 9 | 19 | 419 | 4 | 375 | 1.78e-62 | 206 |
| MS.gene69420.t1 | MTR_3g071100 | 100.000 | 41 | 0 | 0 | 204 | 244 | 23 | 63 | 1.49e-23 | 93.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69420.t1 | AT3G27230 | 70.071 | 421 | 115 | 6 | 1 | 421 | 1 | 410 | 0.0 | 599 |
| MS.gene69420.t1 | AT5G40830 | 68.483 | 422 | 124 | 4 | 1 | 421 | 1 | 414 | 0.0 | 595 |
| MS.gene69420.t1 | AT5G40830 | 68.483 | 422 | 124 | 4 | 1 | 421 | 1 | 414 | 0.0 | 595 |
| MS.gene69420.t1 | AT5G40830 | 62.796 | 422 | 108 | 5 | 1 | 421 | 1 | 374 | 0.0 | 530 |
| MS.gene69420.t1 | AT3G05390 | 40.741 | 324 | 175 | 8 | 104 | 421 | 150 | 462 | 7.27e-84 | 264 |
| MS.gene69420.t1 | AT4G01240 | 41.667 | 348 | 173 | 10 | 89 | 420 | 323 | 656 | 9.22e-80 | 259 |
| MS.gene69420.t1 | AT1G29790 | 33.835 | 399 | 232 | 7 | 24 | 419 | 7 | 376 | 2.61e-71 | 229 |
| MS.gene69420.t1 | AT1G29790 | 33.835 | 399 | 232 | 7 | 24 | 419 | 7 | 376 | 2.61e-71 | 229 |
Find 56 sgRNAs with CRISPR-Local
Find 80 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAGGTTTCCAAAGTGAATT+TGG | 0.174013 | 3.3:-93046884 | None:intergenic |
| CATTTCAGTGATTCCAGTTT+TGG | 0.201099 | 3.3:-93046666 | None:intergenic |
| CTGTTCTTCAGAAGCCTGTT+AGG | 0.201673 | 3.3:+93047536 | MS.gene69420:CDS |
| TTAGCAAAACACCTTCTTCT+AGG | 0.243776 | 3.3:-93046824 | None:intergenic |
| TGCTAAATCTGTTTCTTCTA+AGG | 0.249692 | 3.3:+93046841 | MS.gene69420:CDS |
| GGTTCTGTTTCTTTGAAAAT+TGG | 0.270644 | 3.3:+93046302 | MS.gene69420:CDS |
| TTTGATATTGGAATTGGTTC+TGG | 0.272985 | 3.3:+93047109 | MS.gene69420:CDS |
| TCAAAGACATTATCATAAAA+AGG | 0.296087 | 3.3:-93047265 | None:intergenic |
| TTAGTAACAAGACTGTTAAT+TGG | 0.301382 | 3.3:+93046906 | MS.gene69420:CDS |
| TTATGATAATGTCTTTGATT+TGG | 0.302543 | 3.3:+93047270 | MS.gene69420:CDS |
| TAACCCTCATAAACTTCCTT+TGG | 0.314405 | 3.3:+93046634 | MS.gene69420:CDS |
| TTGGGTAAAGATTCCAAAAC+TGG | 0.315442 | 3.3:+93046653 | MS.gene69420:CDS |
| TGCGGGCTGGTGGTTTGTTT+TGG | 0.317509 | 3.3:+93047377 | MS.gene69420:CDS |
| TTAACAGTCTTGTTACTAAC+AGG | 0.318712 | 3.3:-93046902 | None:intergenic |
| TCACTTGTTTACACCCTAAC+AGG | 0.330154 | 3.3:-93047550 | None:intergenic |
| TTGGATACAGAAAATTGAAA+TGG | 0.350308 | 3.3:+93047464 | MS.gene69420:CDS |
| ATAGGATTTGATATTGGAAT+TGG | 0.350657 | 3.3:+93047103 | MS.gene69420:CDS |
| ATTAGAATAGGATTTGATAT+TGG | 0.361463 | 3.3:+93047097 | MS.gene69420:CDS |
| TATATGAATTACAAAGTGTT+TGG | 0.369620 | 3.3:+93046740 | MS.gene69420:CDS |
| TTGCATGCATTGCTTTGATT+TGG | 0.380204 | 3.3:+93046985 | MS.gene69420:CDS |
| AACCCTCATAAACTTCCTTT+GGG | 0.381617 | 3.3:+93046635 | MS.gene69420:CDS |
| CAAAGTGTTTGGAAATTGTC+AGG | 0.382386 | 3.3:+93046751 | MS.gene69420:CDS |
| TTGGAAATTGTCAGGATGAT+TGG | 0.389503 | 3.3:+93046759 | MS.gene69420:CDS |
| ACAAGGTTGATTGAAAGGTT+TGG | 0.397211 | 3.3:+93047445 | MS.gene69420:CDS |
| GGAAATGGTGGAATTAGAAT+AGG | 0.400305 | 3.3:+93047085 | MS.gene69420:CDS |
| CATTGCTTTGATTTGGTGAA+TGG | 0.407664 | 3.3:+93046992 | MS.gene69420:CDS |
| CAAAACTGGAATCACTGAAA+TGG | 0.411701 | 3.3:+93046667 | MS.gene69420:CDS |
| TTACCCAAAGGAAGTTTATG+AGG | 0.415254 | 3.3:-93046638 | None:intergenic |
| TGGATACAGAAAATTGAAAT+GGG | 0.423072 | 3.3:+93047465 | MS.gene69420:CDS |
| CAGAAAATTGAAATGGGTTG+TGG | 0.423087 | 3.3:+93047471 | MS.gene69420:CDS |
| TTCCAAAGTGAATTTGGAAA+AGG | 0.423351 | 3.3:-93046878 | None:intergenic |
| CATTGACAAGGTTGATTGAA+AGG | 0.426565 | 3.3:+93047440 | MS.gene69420:CDS |
| CTTGGTGAAGTTGTTCGGTT+TGG | 0.435606 | 3.3:-93046451 | None:intergenic |
| TGGTAAGAAACAAGAGAAGT+TGG | 0.449209 | 3.3:+93047324 | MS.gene69420:CDS |
| TGTTCTTCAGAAGCCTGTTA+GGG | 0.451195 | 3.3:+93047537 | MS.gene69420:CDS |
| AGAAAATTGAAATGGGTTGT+GGG | 0.464176 | 3.3:+93047472 | MS.gene69420:CDS |
| AATGGTAAGAAATTGAATAG+AGG | 0.470921 | 3.3:+93046962 | MS.gene69420:CDS |
| GTGTACTTGGTGAAGTTGTT+CGG | 0.472086 | 3.3:-93046456 | None:intergenic |
| TGATCCAAGCTTAAGAAAAG+AGG | 0.499670 | 3.3:-93047235 | None:intergenic |
| CACTGAAATGGTTTCATCTG+TGG | 0.507607 | 3.3:+93046679 | MS.gene69420:CDS |
| TGAATGGTTATGAGAATCAA+AGG | 0.511808 | 3.3:+93047008 | MS.gene69420:CDS |
| GCAGCTATAAATTCATTGAA+AGG | 0.519697 | 3.3:-93047199 | None:intergenic |
| GGTTCGTGCTACAAATACCT+TGG | 0.520674 | 3.3:+93047291 | MS.gene69420:CDS |
| AACAAGACTGTTAATTGGAG+TGG | 0.522922 | 3.3:+93046911 | MS.gene69420:CDS |
| GTTTCTTTGAAAATTGGTGA+TGG | 0.525785 | 3.3:+93046308 | MS.gene69420:CDS |
| AAACACCTTCTTCTAGGTAA+AGG | 0.526592 | 3.3:-93046818 | None:intergenic |
| GAAATGGGTTGTGGGAGAAA+AGG | 0.531934 | 3.3:+93047480 | MS.gene69420:CDS |
| GTGGGAGAAAAGGTTGATAG+TGG | 0.534948 | 3.3:+93047490 | MS.gene69420:CDS |
| AATGAATTTATAGCTGCAAG+AGG | 0.548634 | 3.3:+93047205 | MS.gene69420:CDS |
| ACTGAAATGGTTTCATCTGT+GGG | 0.553481 | 3.3:+93046680 | MS.gene69420:CDS |
| TACCCAAAGGAAGTTTATGA+GGG | 0.566733 | 3.3:-93046637 | None:intergenic |
| GTGAGCCTTTACCTAGAAGA+AGG | 0.567293 | 3.3:+93046813 | MS.gene69420:CDS |
| TTGCTGCTGTAATGGCTGAA+AGG | 0.580054 | 3.3:+93047137 | MS.gene69420:CDS |
| AGAAGAAAATTTCATTGACA+AGG | 0.582193 | 3.3:+93047428 | MS.gene69420:CDS |
| CTTACCAACATCATCATCCA+AGG | 0.591615 | 3.3:-93047308 | None:intergenic |
| AATACCTTGGATGATGATGT+TGG | 0.652086 | 3.3:+93047304 | MS.gene69420:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAGAATAGGATTTGATAT+TGG | + | chr3.3:93047097-93047116 | MS.gene69420:CDS | 20.0% |
| !! | TCAAAGACATTATCATAAAA+AGG | - | chr3.3:93047268-93047287 | None:intergenic | 20.0% |
| !!! | TATATGAATTACAAAGTGTT+TGG | + | chr3.3:93046740-93046759 | MS.gene69420:CDS | 20.0% |
| !!! | TTATGATAATGTCTTTGATT+TGG | + | chr3.3:93047270-93047289 | MS.gene69420:CDS | 20.0% |
| ! | AATGGTAAGAAATTGAATAG+AGG | + | chr3.3:93046962-93046981 | MS.gene69420:CDS | 25.0% |
| ! | AGAAGAAAATTTCATTGACA+AGG | + | chr3.3:93047428-93047447 | MS.gene69420:CDS | 25.0% |
| ! | ATAGGATTTGATATTGGAAT+TGG | + | chr3.3:93047103-93047122 | MS.gene69420:CDS | 25.0% |
| ! | TGGATACAGAAAATTGAAAT+GGG | + | chr3.3:93047465-93047484 | MS.gene69420:CDS | 25.0% |
| ! | TTAGTAACAAGACTGTTAAT+TGG | + | chr3.3:93046906-93046925 | MS.gene69420:CDS | 25.0% |
| ! | TTGGATACAGAAAATTGAAA+TGG | + | chr3.3:93047464-93047483 | MS.gene69420:CDS | 25.0% |
| !!! | AAAAAGATTGGTAGTGATAA+CGG | - | chr3.3:93046396-93046415 | None:intergenic | 25.0% |
| !!! | AAGAATTTTGAGTGTTTGAA+TGG | + | chr3.3:93046944-93046963 | MS.gene69420:CDS | 25.0% |
| !!! | CTCAGAAATTGATTTTGAAA+GGG | + | chr3.3:93046789-93046808 | MS.gene69420:CDS | 25.0% |
| AATGAATTTATAGCTGCAAG+AGG | + | chr3.3:93047205-93047224 | MS.gene69420:CDS | 30.0% | |
| AGCATAAAGAGCAAAAAGAT+TGG | - | chr3.3:93046408-93046427 | None:intergenic | 30.0% | |
| GCAGCTATAAATTCATTGAA+AGG | - | chr3.3:93047202-93047221 | None:intergenic | 30.0% | |
| TGAATGGTTATGAGAATCAA+AGG | + | chr3.3:93047008-93047027 | MS.gene69420:CDS | 30.0% | |
| TTCCAAAGTGAATTTGGAAA+AGG | - | chr3.3:93046881-93046900 | None:intergenic | 30.0% | |
| ! | ATCCTTTTCCAAATTCACTT+TGG | + | chr3.3:93046876-93046895 | MS.gene69420:CDS | 30.0% |
| ! | GGTTCTGTTTCTTTGAAAAT+TGG | + | chr3.3:93046302-93046321 | MS.gene69420:CDS | 30.0% |
| ! | GTTTCTTTGAAAATTGGTGA+TGG | + | chr3.3:93046308-93046327 | MS.gene69420:CDS | 30.0% |
| ! | TGCTAAATCTGTTTCTTCTA+AGG | + | chr3.3:93046841-93046860 | MS.gene69420:CDS | 30.0% |
| ! | TTAAGCTCTTTTGCAATGTT+GGG | - | chr3.3:93046605-93046624 | None:intergenic | 30.0% |
| ! | TTTAAGCTCTTTTGCAATGT+TGG | - | chr3.3:93046606-93046625 | None:intergenic | 30.0% |
| ! | TTTGATATTGGAATTGGTTC+TGG | + | chr3.3:93047109-93047128 | MS.gene69420:CDS | 30.0% |
| ! | TTTTCCTCTTTTCTTAAGCT+TGG | + | chr3.3:93047231-93047250 | MS.gene69420:CDS | 30.0% |
| ! | TTTTCTTAAGCTTGGATCAT+AGG | + | chr3.3:93047239-93047258 | MS.gene69420:CDS | 30.0% |
| !! | AGAAAATTGAAATGGGTTGT+GGG | + | chr3.3:93047472-93047491 | MS.gene69420:CDS | 30.0% |
| !! | GCTCAGAAATTGATTTTGAA+AGG | + | chr3.3:93046788-93046807 | MS.gene69420:CDS | 30.0% |
| !! | TTAACAGTCTTGTTACTAAC+AGG | - | chr3.3:93046905-93046924 | None:intergenic | 30.0% |
| !! | TTTTCTTGCTGATGATGTTT+TGG | + | chr3.3:93047057-93047076 | MS.gene69420:CDS | 30.0% |
| !!! | AAGAAGCTGTTTTTCTATCT+GGG | - | chr3.3:93046555-93046574 | None:intergenic | 30.0% |
| AAACACCTTCTTCTAGGTAA+AGG | - | chr3.3:93046821-93046840 | None:intergenic | 35.0% | |
| AACAAGACTGTTAATTGGAG+TGG | + | chr3.3:93046911-93046930 | MS.gene69420:CDS | 35.0% | |
| AACCCTCATAAACTTCCTTT+GGG | + | chr3.3:93046635-93046654 | MS.gene69420:CDS | 35.0% | |
| ACAGGTTTCCAAAGTGAATT+TGG | - | chr3.3:93046887-93046906 | None:intergenic | 35.0% | |
| ACTGAAATGGTTTCATCTGT+GGG | + | chr3.3:93046680-93046699 | MS.gene69420:CDS | 35.0% | |
| CAAAACTGGAATCACTGAAA+TGG | + | chr3.3:93046667-93046686 | MS.gene69420:CDS | 35.0% | |
| CAGATAGAAAAACAGCTTCT+TGG | + | chr3.3:93046554-93046573 | MS.gene69420:CDS | 35.0% | |
| TAACCCTCATAAACTTCCTT+TGG | + | chr3.3:93046634-93046653 | MS.gene69420:CDS | 35.0% | |
| TACCCAAAGGAAGTTTATGA+GGG | - | chr3.3:93046640-93046659 | None:intergenic | 35.0% | |
| TGATCCAAGCTTAAGAAAAG+AGG | - | chr3.3:93047238-93047257 | None:intergenic | 35.0% | |
| TGGTAAGAAACAAGAGAAGT+TGG | + | chr3.3:93047324-93047343 | MS.gene69420:CDS | 35.0% | |
| TTACCCAAAGGAAGTTTATG+AGG | - | chr3.3:93046641-93046660 | None:intergenic | 35.0% | |
| TTAGCAAAACACCTTCTTCT+AGG | - | chr3.3:93046827-93046846 | None:intergenic | 35.0% | |
| TTGCATGCATTGCTTTGATT+TGG | + | chr3.3:93046985-93047004 | MS.gene69420:CDS | 35.0% | |
| TTGGAAATTGTCAGGATGAT+TGG | + | chr3.3:93046759-93046778 | MS.gene69420:CDS | 35.0% | |
| TTGGGTAAAGATTCCAAAAC+TGG | + | chr3.3:93046653-93046672 | MS.gene69420:CDS | 35.0% | |
| ! | AATACCTTGGATGATGATGT+TGG | + | chr3.3:93047304-93047323 | MS.gene69420:CDS | 35.0% |
| ! | ACAAGGTTGATTGAAAGGTT+TGG | + | chr3.3:93047445-93047464 | MS.gene69420:CDS | 35.0% |
| ! | CAAAGTGTTTGGAAATTGTC+AGG | + | chr3.3:93046751-93046770 | MS.gene69420:CDS | 35.0% |
| ! | CATTGACAAGGTTGATTGAA+AGG | + | chr3.3:93047440-93047459 | MS.gene69420:CDS | 35.0% |
| ! | CATTTCAGTGATTCCAGTTT+TGG | - | chr3.3:93046669-93046688 | None:intergenic | 35.0% |
| ! | GAGAGAAGTTTTTGTGTACT+TGG | - | chr3.3:93046472-93046491 | None:intergenic | 35.0% |
| ! | GGAAATGGTGGAATTAGAAT+AGG | + | chr3.3:93047085-93047104 | MS.gene69420:CDS | 35.0% |
| !! | CAGAAAATTGAAATGGGTTG+TGG | + | chr3.3:93047471-93047490 | MS.gene69420:CDS | 35.0% |
| !! | CATTGCTTTGATTTGGTGAA+TGG | + | chr3.3:93046992-93047011 | MS.gene69420:CDS | 35.0% |
| !!! | CAAGAAGCTGTTTTTCTATC+TGG | - | chr3.3:93046556-93046575 | None:intergenic | 35.0% |
| !!! | GATGTTTTGGCATTAGGAAA+TGG | + | chr3.3:93047070-93047089 | MS.gene69420:CDS | 35.0% |
| !!! | GTTTTGGAATCTTTACCCAA+AGG | - | chr3.3:93046653-93046672 | None:intergenic | 35.0% |
| CACTGAAATGGTTTCATCTG+TGG | + | chr3.3:93046679-93046698 | MS.gene69420:CDS | 40.0% | |
| CTTACCAACATCATCATCCA+AGG | - | chr3.3:93047311-93047330 | None:intergenic | 40.0% | |
| TGTTCTTCAGAAGCCTGTTA+GGG | + | chr3.3:93047537-93047556 | MS.gene69420:CDS | 40.0% | |
| ! | GTGTACTTGGTGAAGTTGTT+CGG | - | chr3.3:93046459-93046478 | None:intergenic | 40.0% |
| ! | TCGACATCGATCGAATTTTG+CGG | + | chr3.3:93047359-93047378 | MS.gene69420:CDS | 40.0% |
| ! | TGGATCTTTTGCTGCTGTAA+TGG | + | chr3.3:93047129-93047148 | MS.gene69420:CDS | 40.0% |
| !! | GTTTTGGCATTAGGAAATGG+TGG | + | chr3.3:93047073-93047092 | MS.gene69420:CDS | 40.0% |
| !!! | GCTGATGATGTTTTGGCATT+AGG | + | chr3.3:93047064-93047083 | MS.gene69420:CDS | 40.0% |
| !!! | TGTTCGGTTTGGCTGTTTTT+TGG | - | chr3.3:93046443-93046462 | None:intergenic | 40.0% |
| CTGTTCTTCAGAAGCCTGTT+AGG | + | chr3.3:93047536-93047555 | MS.gene69420:CDS | 45.0% | |
| CTTGGTGAAGTTGTTCGGTT+TGG | - | chr3.3:93046454-93046473 | None:intergenic | 45.0% | |
| GGTTCGTGCTACAAATACCT+TGG | + | chr3.3:93047291-93047310 | MS.gene69420:CDS | 45.0% | |
| GTGAGCCTTTACCTAGAAGA+AGG | + | chr3.3:93046813-93046832 | MS.gene69420:CDS | 45.0% | |
| TTGCTGCTGTAATGGCTGAA+AGG | + | chr3.3:93047137-93047156 | MS.gene69420:CDS | 45.0% | |
| ! | CGACATCGATCGAATTTTGC+GGG | + | chr3.3:93047360-93047379 | MS.gene69420:CDS | 45.0% |
| !! | GAAATGGGTTGTGGGAGAAA+AGG | + | chr3.3:93047480-93047499 | MS.gene69420:CDS | 45.0% |
| !! | GTGGGAGAAAAGGTTGATAG+TGG | + | chr3.3:93047490-93047509 | MS.gene69420:CDS | 45.0% |
| ! | ATCGATCGAATTTTGCGGGC+TGG | + | chr3.3:93047364-93047383 | MS.gene69420:CDS | 50.0% |
| !!! | GATCGAATTTTGCGGGCTGG+TGG | + | chr3.3:93047367-93047386 | MS.gene69420:CDS | 55.0% |
| !!! | TGCGGGCTGGTGGTTTGTTT+TGG | + | chr3.3:93047377-93047396 | MS.gene69420:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 93046299 | 93047564 | 93046299 | ID=MS.gene69420 |
| chr3.3 | mRNA | 93046299 | 93047564 | 93046299 | ID=MS.gene69420.t1;Parent=MS.gene69420 |
| chr3.3 | exon | 93046299 | 93047564 | 93046299 | ID=MS.gene69420.t1.exon1;Parent=MS.gene69420.t1 |
| chr3.3 | CDS | 93046299 | 93047564 | 93046299 | ID=cds.MS.gene69420.t1;Parent=MS.gene69420.t1 |
| Gene Sequence |
| Protein sequence |
