Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064739.t1 | XP_013462202.1 | 97.4 | 421 | 11 | 0 | 1 | 421 | 1 | 421 | 5.10E-236 | 826.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064739.t1 | A0A072V314 | 97.4 | 421 | 11 | 0 | 1 | 421 | 1 | 421 | 3.7e-236 | 826.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049260 | MS.gene064739 | 0.810051 | 1.40E-50 | -1.69E-46 |
| MS.gene049758 | MS.gene064739 | 0.834719 | 2.55E-56 | -1.69E-46 |
| MS.gene050319 | MS.gene064739 | -0.804263 | 2.35E-49 | -1.69E-46 |
| MS.gene050438 | MS.gene064739 | 0.829194 | 5.90E-55 | -1.69E-46 |
| MS.gene050558 | MS.gene064739 | 0.815419 | 9.33E-52 | -1.69E-46 |
| MS.gene051663 | MS.gene064739 | 0.812705 | 3.71E-51 | -1.69E-46 |
| MS.gene051860 | MS.gene064739 | 0.813657 | 2.29E-51 | -1.69E-46 |
| MS.gene052207 | MS.gene064739 | 0.849074 | 4.08E-60 | -1.69E-46 |
| MS.gene053630 | MS.gene064739 | 0.805795 | 1.12E-49 | -1.69E-46 |
| MS.gene053836 | MS.gene064739 | 0.837498 | 5.02E-57 | -1.69E-46 |
| MS.gene054473 | MS.gene064739 | 0.81582 | 7.60E-52 | -1.69E-46 |
| MS.gene054942 | MS.gene064739 | 0.82182 | 3.30E-53 | -1.69E-46 |
| MS.gene055390 | MS.gene064739 | 0.820322 | 7.29E-53 | -1.69E-46 |
| MS.gene055422 | MS.gene064739 | 0.820259 | 7.54E-53 | -1.69E-46 |
| MS.gene056069 | MS.gene064739 | -0.807507 | 4.89E-50 | -1.69E-46 |
| MS.gene057121 | MS.gene064739 | 0.811924 | 5.49E-51 | -1.69E-46 |
| MS.gene057260 | MS.gene064739 | 0.811031 | 8.58E-51 | -1.69E-46 |
| MS.gene057469 | MS.gene064739 | 0.827033 | 1.96E-54 | -1.69E-46 |
| MS.gene05811 | MS.gene064739 | 0.81237 | 4.39E-51 | -1.69E-46 |
| MS.gene060559 | MS.gene064739 | 0.801552 | 8.53E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene064739 | MS.gene014442 | PPI |
| MS.gene064739 | MS.gene27044 | PPI |
| MS.gene064739 | MS.gene64194 | PPI |
| MS.gene064739 | MS.gene63991 | PPI |
| MS.gene064739 | MS.gene24186 | PPI |
| MS.gene42277 | MS.gene064739 | PPI |
| MS.gene064739 | MS.gene069406 | PPI |
| MS.gene27044 | MS.gene064739 | PPI |
| MS.gene064739 | MS.gene028330 | PPI |
| MS.gene023122 | MS.gene064739 | PPI |
| MS.gene064739 | MS.gene36460 | PPI |
| MS.gene064739 | MS.gene35128 | PPI |
| MS.gene064739 | MS.gene69420 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064739.t1 | MTR_3g113270 | 97.387 | 421 | 11 | 0 | 1 | 421 | 1 | 421 | 0.0 | 848 |
| MS.gene064739.t1 | MTR_1g024005 | 76.457 | 429 | 88 | 5 | 1 | 420 | 1 | 425 | 0.0 | 656 |
| MS.gene064739.t1 | MTR_3g071050 | 97.358 | 265 | 7 | 0 | 29 | 293 | 1 | 265 | 0.0 | 540 |
| MS.gene064739.t1 | MTR_3g070620 | 97.037 | 135 | 4 | 0 | 225 | 359 | 54 | 188 | 2.49e-91 | 274 |
| MS.gene064739.t1 | MTR_2g028590 | 40.053 | 377 | 208 | 8 | 56 | 419 | 92 | 463 | 5.20e-89 | 278 |
| MS.gene064739.t1 | MTR_2g028610 | 37.123 | 431 | 224 | 11 | 30 | 419 | 34 | 458 | 9.37e-89 | 277 |
| MS.gene064739.t1 | MTR_5g077710 | 42.722 | 316 | 169 | 8 | 113 | 420 | 74 | 385 | 1.64e-86 | 269 |
| MS.gene064739.t1 | MTR_8g028460 | 40.785 | 331 | 175 | 7 | 104 | 420 | 164 | 487 | 4.02e-82 | 261 |
| MS.gene064739.t1 | MTR_0010s0400 | 41.667 | 324 | 172 | 9 | 104 | 421 | 147 | 459 | 6.35e-82 | 259 |
| MS.gene064739.t1 | MTR_4g094572 | 32.847 | 411 | 227 | 9 | 19 | 419 | 4 | 375 | 1.78e-62 | 206 |
| MS.gene064739.t1 | MTR_3g071100 | 100.000 | 41 | 0 | 0 | 204 | 244 | 23 | 63 | 1.49e-23 | 93.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064739.t1 | AT3G27230 | 70.071 | 421 | 115 | 6 | 1 | 421 | 1 | 410 | 0.0 | 599 |
| MS.gene064739.t1 | AT5G40830 | 68.483 | 422 | 124 | 4 | 1 | 421 | 1 | 414 | 0.0 | 595 |
| MS.gene064739.t1 | AT5G40830 | 68.483 | 422 | 124 | 4 | 1 | 421 | 1 | 414 | 0.0 | 595 |
| MS.gene064739.t1 | AT5G40830 | 62.796 | 422 | 108 | 5 | 1 | 421 | 1 | 374 | 0.0 | 530 |
| MS.gene064739.t1 | AT3G05390 | 40.741 | 324 | 175 | 8 | 104 | 421 | 150 | 462 | 7.27e-84 | 264 |
| MS.gene064739.t1 | AT4G01240 | 41.667 | 348 | 173 | 10 | 89 | 420 | 323 | 656 | 9.22e-80 | 259 |
| MS.gene064739.t1 | AT1G29790 | 33.835 | 399 | 232 | 7 | 24 | 419 | 7 | 376 | 2.61e-71 | 229 |
| MS.gene064739.t1 | AT1G29790 | 33.835 | 399 | 232 | 7 | 24 | 419 | 7 | 376 | 2.61e-71 | 229 |
Find 56 sgRNAs with CRISPR-Local
Find 80 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAGGTTTCCAAAGTGAATT+TGG | 0.174013 | 3.4:-97694953 | None:intergenic |
| CATTTCAGTGATTCCAGTTT+TGG | 0.201099 | 3.4:-97694735 | None:intergenic |
| CTGTTCTTCAGAAGCCTGTT+AGG | 0.201673 | 3.4:+97695605 | MS.gene064739:CDS |
| TTAGCAAAACACCTTCTTCT+AGG | 0.243776 | 3.4:-97694893 | None:intergenic |
| TGCTAAATCTGTTTCTTCTA+AGG | 0.249692 | 3.4:+97694910 | MS.gene064739:CDS |
| GGTTCTGTTTCTTTGAAAAT+TGG | 0.270644 | 3.4:+97694371 | MS.gene064739:CDS |
| TTTGATATTGGAATTGGTTC+TGG | 0.272985 | 3.4:+97695178 | MS.gene064739:CDS |
| TCAAAGACATTATCATAAAA+AGG | 0.296087 | 3.4:-97695334 | None:intergenic |
| TTAGTAACAAGACTGTTAAT+TGG | 0.301382 | 3.4:+97694975 | MS.gene064739:CDS |
| TTATGATAATGTCTTTGATT+TGG | 0.302543 | 3.4:+97695339 | MS.gene064739:CDS |
| TAACCCTCATAAACTTCCTT+TGG | 0.314405 | 3.4:+97694703 | MS.gene064739:CDS |
| TTGGGTAAAGATTCCAAAAC+TGG | 0.315442 | 3.4:+97694722 | MS.gene064739:CDS |
| TGCGGGCTGGTGGTTTGTTT+TGG | 0.317509 | 3.4:+97695446 | MS.gene064739:CDS |
| TTAACAGTCTTGTTACTAAC+AGG | 0.318712 | 3.4:-97694971 | None:intergenic |
| TCACTTGTTTACACCCTAAC+AGG | 0.330154 | 3.4:-97695619 | None:intergenic |
| TTGGATACAGAAAATTGAAA+TGG | 0.350308 | 3.4:+97695533 | MS.gene064739:CDS |
| ATAGGATTTGATATTGGAAT+TGG | 0.350657 | 3.4:+97695172 | MS.gene064739:CDS |
| ATTAGAATAGGATTTGATAT+TGG | 0.361463 | 3.4:+97695166 | MS.gene064739:CDS |
| TATATGAATTACAAAGTGTT+TGG | 0.369620 | 3.4:+97694809 | MS.gene064739:CDS |
| TTGCATGCATTGCTTTGATT+TGG | 0.380204 | 3.4:+97695054 | MS.gene064739:CDS |
| AACCCTCATAAACTTCCTTT+GGG | 0.381617 | 3.4:+97694704 | MS.gene064739:CDS |
| CAAAGTGTTTGGAAATTGTC+AGG | 0.382386 | 3.4:+97694820 | MS.gene064739:CDS |
| TTGGAAATTGTCAGGATGAT+TGG | 0.389503 | 3.4:+97694828 | MS.gene064739:CDS |
| ACAAGGTTGATTGAAAGGTT+TGG | 0.397211 | 3.4:+97695514 | MS.gene064739:CDS |
| GGAAATGGTGGAATTAGAAT+AGG | 0.400305 | 3.4:+97695154 | MS.gene064739:CDS |
| CATTGCTTTGATTTGGTGAA+TGG | 0.407664 | 3.4:+97695061 | MS.gene064739:CDS |
| CAAAACTGGAATCACTGAAA+TGG | 0.411701 | 3.4:+97694736 | MS.gene064739:CDS |
| TTACCCAAAGGAAGTTTATG+AGG | 0.415254 | 3.4:-97694707 | None:intergenic |
| TGGATACAGAAAATTGAAAT+GGG | 0.423072 | 3.4:+97695534 | MS.gene064739:CDS |
| CAGAAAATTGAAATGGGTTG+TGG | 0.423087 | 3.4:+97695540 | MS.gene064739:CDS |
| TTCCAAAGTGAATTTGGAAA+AGG | 0.423351 | 3.4:-97694947 | None:intergenic |
| CATTGACAAGGTTGATTGAA+AGG | 0.426565 | 3.4:+97695509 | MS.gene064739:CDS |
| CTTGGTGAAGTTGTTCGGTT+TGG | 0.435606 | 3.4:-97694520 | None:intergenic |
| TGGTAAGAAACAAGAGAAGT+TGG | 0.449209 | 3.4:+97695393 | MS.gene064739:CDS |
| TGTTCTTCAGAAGCCTGTTA+GGG | 0.451195 | 3.4:+97695606 | MS.gene064739:CDS |
| AGAAAATTGAAATGGGTTGT+GGG | 0.464176 | 3.4:+97695541 | MS.gene064739:CDS |
| AATGGTAAGAAATTGAATAG+AGG | 0.470921 | 3.4:+97695031 | MS.gene064739:CDS |
| GTGTACTTGGTGAAGTTGTT+CGG | 0.472086 | 3.4:-97694525 | None:intergenic |
| TGATCCAAGCTTAAGAAAAG+AGG | 0.499670 | 3.4:-97695304 | None:intergenic |
| CACTGAAATGGTTTCATCTG+TGG | 0.507607 | 3.4:+97694748 | MS.gene064739:CDS |
| TGAATGGTTATGAGAATCAA+AGG | 0.511808 | 3.4:+97695077 | MS.gene064739:CDS |
| GCAGCTATAAATTCATTGAA+AGG | 0.519697 | 3.4:-97695268 | None:intergenic |
| GGTTCGTGCTACAAATACCT+TGG | 0.520674 | 3.4:+97695360 | MS.gene064739:CDS |
| AACAAGACTGTTAATTGGAG+TGG | 0.522922 | 3.4:+97694980 | MS.gene064739:CDS |
| GTTTCTTTGAAAATTGGTGA+TGG | 0.525785 | 3.4:+97694377 | MS.gene064739:CDS |
| AAACACCTTCTTCTAGGTAA+AGG | 0.526592 | 3.4:-97694887 | None:intergenic |
| GAAATGGGTTGTGGGAGAAA+AGG | 0.531934 | 3.4:+97695549 | MS.gene064739:CDS |
| GTGGGAGAAAAGGTTGATAG+TGG | 0.534948 | 3.4:+97695559 | MS.gene064739:CDS |
| AATGAATTTATAGCTGCAAG+AGG | 0.548634 | 3.4:+97695274 | MS.gene064739:CDS |
| ACTGAAATGGTTTCATCTGT+GGG | 0.553481 | 3.4:+97694749 | MS.gene064739:CDS |
| TACCCAAAGGAAGTTTATGA+GGG | 0.566733 | 3.4:-97694706 | None:intergenic |
| GTGAGCCTTTACCTAGAAGA+AGG | 0.567293 | 3.4:+97694882 | MS.gene064739:CDS |
| TTGCTGCTGTAATGGCTGAA+AGG | 0.580054 | 3.4:+97695206 | MS.gene064739:CDS |
| AGAAGAAAATTTCATTGACA+AGG | 0.582193 | 3.4:+97695497 | MS.gene064739:CDS |
| CTTACCAACATCATCATCCA+AGG | 0.591615 | 3.4:-97695377 | None:intergenic |
| AATACCTTGGATGATGATGT+TGG | 0.652086 | 3.4:+97695373 | MS.gene064739:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAGAATAGGATTTGATAT+TGG | + | chr3.4:97695166-97695185 | MS.gene064739:CDS | 20.0% |
| !! | TCAAAGACATTATCATAAAA+AGG | - | chr3.4:97695337-97695356 | None:intergenic | 20.0% |
| !!! | TATATGAATTACAAAGTGTT+TGG | + | chr3.4:97694809-97694828 | MS.gene064739:CDS | 20.0% |
| !!! | TTATGATAATGTCTTTGATT+TGG | + | chr3.4:97695339-97695358 | MS.gene064739:CDS | 20.0% |
| ! | AATGGTAAGAAATTGAATAG+AGG | + | chr3.4:97695031-97695050 | MS.gene064739:CDS | 25.0% |
| ! | AGAAGAAAATTTCATTGACA+AGG | + | chr3.4:97695497-97695516 | MS.gene064739:CDS | 25.0% |
| ! | ATAGGATTTGATATTGGAAT+TGG | + | chr3.4:97695172-97695191 | MS.gene064739:CDS | 25.0% |
| ! | TGGATACAGAAAATTGAAAT+GGG | + | chr3.4:97695534-97695553 | MS.gene064739:CDS | 25.0% |
| ! | TTAGTAACAAGACTGTTAAT+TGG | + | chr3.4:97694975-97694994 | MS.gene064739:CDS | 25.0% |
| ! | TTGGATACAGAAAATTGAAA+TGG | + | chr3.4:97695533-97695552 | MS.gene064739:CDS | 25.0% |
| !! | AAAAAGATTGGTTGTGATAA+CGG | - | chr3.4:97694465-97694484 | None:intergenic | 25.0% |
| !!! | AAGAATTTTGAGTGTTTGAA+TGG | + | chr3.4:97695013-97695032 | MS.gene064739:CDS | 25.0% |
| !!! | CTCAGAAATTGATTTTGAAA+GGG | + | chr3.4:97694858-97694877 | MS.gene064739:CDS | 25.0% |
| AATGAATTTATAGCTGCAAG+AGG | + | chr3.4:97695274-97695293 | MS.gene064739:CDS | 30.0% | |
| AGCATAAAGAGCAAAAAGAT+TGG | - | chr3.4:97694477-97694496 | None:intergenic | 30.0% | |
| GCAGCTATAAATTCATTGAA+AGG | - | chr3.4:97695271-97695290 | None:intergenic | 30.0% | |
| TGAATGGTTATGAGAATCAA+AGG | + | chr3.4:97695077-97695096 | MS.gene064739:CDS | 30.0% | |
| TTCCAAAGTGAATTTGGAAA+AGG | - | chr3.4:97694950-97694969 | None:intergenic | 30.0% | |
| ! | ATCCTTTTCCAAATTCACTT+TGG | + | chr3.4:97694945-97694964 | MS.gene064739:CDS | 30.0% |
| ! | GGTTCTGTTTCTTTGAAAAT+TGG | + | chr3.4:97694371-97694390 | MS.gene064739:CDS | 30.0% |
| ! | GTTTCTTTGAAAATTGGTGA+TGG | + | chr3.4:97694377-97694396 | MS.gene064739:CDS | 30.0% |
| ! | TGCTAAATCTGTTTCTTCTA+AGG | + | chr3.4:97694910-97694929 | MS.gene064739:CDS | 30.0% |
| ! | TTAAGCTCTTTTGCAATGTT+GGG | - | chr3.4:97694674-97694693 | None:intergenic | 30.0% |
| ! | TTTAAGCTCTTTTGCAATGT+TGG | - | chr3.4:97694675-97694694 | None:intergenic | 30.0% |
| ! | TTTGATATTGGAATTGGTTC+TGG | + | chr3.4:97695178-97695197 | MS.gene064739:CDS | 30.0% |
| ! | TTTTCCTCTTTTCTTAAGCT+TGG | + | chr3.4:97695300-97695319 | MS.gene064739:CDS | 30.0% |
| ! | TTTTCTTAAGCTTGGATCAT+AGG | + | chr3.4:97695308-97695327 | MS.gene064739:CDS | 30.0% |
| !! | AGAAAATTGAAATGGGTTGT+GGG | + | chr3.4:97695541-97695560 | MS.gene064739:CDS | 30.0% |
| !! | GCTCAGAAATTGATTTTGAA+AGG | + | chr3.4:97694857-97694876 | MS.gene064739:CDS | 30.0% |
| !! | TTAACAGTCTTGTTACTAAC+AGG | - | chr3.4:97694974-97694993 | None:intergenic | 30.0% |
| !! | TTTTCTTGCTGATGATGTTT+TGG | + | chr3.4:97695126-97695145 | MS.gene064739:CDS | 30.0% |
| !!! | AAGAAGCTGTTTTTCTATCT+GGG | - | chr3.4:97694624-97694643 | None:intergenic | 30.0% |
| AAACACCTTCTTCTAGGTAA+AGG | - | chr3.4:97694890-97694909 | None:intergenic | 35.0% | |
| AACAAGACTGTTAATTGGAG+TGG | + | chr3.4:97694980-97694999 | MS.gene064739:CDS | 35.0% | |
| AACCCTCATAAACTTCCTTT+GGG | + | chr3.4:97694704-97694723 | MS.gene064739:CDS | 35.0% | |
| ACAGGTTTCCAAAGTGAATT+TGG | - | chr3.4:97694956-97694975 | None:intergenic | 35.0% | |
| ACTGAAATGGTTTCATCTGT+GGG | + | chr3.4:97694749-97694768 | MS.gene064739:CDS | 35.0% | |
| CAAAACTGGAATCACTGAAA+TGG | + | chr3.4:97694736-97694755 | MS.gene064739:CDS | 35.0% | |
| CAGATAGAAAAACAGCTTCT+TGG | + | chr3.4:97694623-97694642 | MS.gene064739:CDS | 35.0% | |
| TAACCCTCATAAACTTCCTT+TGG | + | chr3.4:97694703-97694722 | MS.gene064739:CDS | 35.0% | |
| TACCCAAAGGAAGTTTATGA+GGG | - | chr3.4:97694709-97694728 | None:intergenic | 35.0% | |
| TGATCCAAGCTTAAGAAAAG+AGG | - | chr3.4:97695307-97695326 | None:intergenic | 35.0% | |
| TGGTAAGAAACAAGAGAAGT+TGG | + | chr3.4:97695393-97695412 | MS.gene064739:CDS | 35.0% | |
| TTACCCAAAGGAAGTTTATG+AGG | - | chr3.4:97694710-97694729 | None:intergenic | 35.0% | |
| TTAGCAAAACACCTTCTTCT+AGG | - | chr3.4:97694896-97694915 | None:intergenic | 35.0% | |
| TTGCATGCATTGCTTTGATT+TGG | + | chr3.4:97695054-97695073 | MS.gene064739:CDS | 35.0% | |
| TTGGAAATTGTCAGGATGAT+TGG | + | chr3.4:97694828-97694847 | MS.gene064739:CDS | 35.0% | |
| TTGGGTAAAGATTCCAAAAC+TGG | + | chr3.4:97694722-97694741 | MS.gene064739:CDS | 35.0% | |
| ! | AATACCTTGGATGATGATGT+TGG | + | chr3.4:97695373-97695392 | MS.gene064739:CDS | 35.0% |
| ! | ACAAGGTTGATTGAAAGGTT+TGG | + | chr3.4:97695514-97695533 | MS.gene064739:CDS | 35.0% |
| ! | CAAAGTGTTTGGAAATTGTC+AGG | + | chr3.4:97694820-97694839 | MS.gene064739:CDS | 35.0% |
| ! | CATTGACAAGGTTGATTGAA+AGG | + | chr3.4:97695509-97695528 | MS.gene064739:CDS | 35.0% |
| ! | CATTTCAGTGATTCCAGTTT+TGG | - | chr3.4:97694738-97694757 | None:intergenic | 35.0% |
| ! | GAGAGAAGTTTTTGTGTACT+TGG | - | chr3.4:97694541-97694560 | None:intergenic | 35.0% |
| ! | GGAAATGGTGGAATTAGAAT+AGG | + | chr3.4:97695154-97695173 | MS.gene064739:CDS | 35.0% |
| !! | CAGAAAATTGAAATGGGTTG+TGG | + | chr3.4:97695540-97695559 | MS.gene064739:CDS | 35.0% |
| !! | CATTGCTTTGATTTGGTGAA+TGG | + | chr3.4:97695061-97695080 | MS.gene064739:CDS | 35.0% |
| !!! | CAAGAAGCTGTTTTTCTATC+TGG | - | chr3.4:97694625-97694644 | None:intergenic | 35.0% |
| !!! | GATGTTTTGGCATTAGGAAA+TGG | + | chr3.4:97695139-97695158 | MS.gene064739:CDS | 35.0% |
| !!! | GTTTTGGAATCTTTACCCAA+AGG | - | chr3.4:97694722-97694741 | None:intergenic | 35.0% |
| CACTGAAATGGTTTCATCTG+TGG | + | chr3.4:97694748-97694767 | MS.gene064739:CDS | 40.0% | |
| CTTACCAACATCATCATCCA+AGG | - | chr3.4:97695380-97695399 | None:intergenic | 40.0% | |
| TGTTCTTCAGAAGCCTGTTA+GGG | + | chr3.4:97695606-97695625 | MS.gene064739:CDS | 40.0% | |
| ! | GTGTACTTGGTGAAGTTGTT+CGG | - | chr3.4:97694528-97694547 | None:intergenic | 40.0% |
| ! | TCGACATCGATCGAATTTTG+CGG | + | chr3.4:97695428-97695447 | MS.gene064739:CDS | 40.0% |
| ! | TGGATCTTTTGCTGCTGTAA+TGG | + | chr3.4:97695198-97695217 | MS.gene064739:CDS | 40.0% |
| !! | GTTTTGGCATTAGGAAATGG+TGG | + | chr3.4:97695142-97695161 | MS.gene064739:CDS | 40.0% |
| !!! | GCTGATGATGTTTTGGCATT+AGG | + | chr3.4:97695133-97695152 | MS.gene064739:CDS | 40.0% |
| !!! | TGTTCGGTTTGGCTGTTTTT+TGG | - | chr3.4:97694512-97694531 | None:intergenic | 40.0% |
| CTGTTCTTCAGAAGCCTGTT+AGG | + | chr3.4:97695605-97695624 | MS.gene064739:CDS | 45.0% | |
| CTTGGTGAAGTTGTTCGGTT+TGG | - | chr3.4:97694523-97694542 | None:intergenic | 45.0% | |
| GGTTCGTGCTACAAATACCT+TGG | + | chr3.4:97695360-97695379 | MS.gene064739:CDS | 45.0% | |
| GTGAGCCTTTACCTAGAAGA+AGG | + | chr3.4:97694882-97694901 | MS.gene064739:CDS | 45.0% | |
| TTGCTGCTGTAATGGCTGAA+AGG | + | chr3.4:97695206-97695225 | MS.gene064739:CDS | 45.0% | |
| ! | CGACATCGATCGAATTTTGC+GGG | + | chr3.4:97695429-97695448 | MS.gene064739:CDS | 45.0% |
| !! | GAAATGGGTTGTGGGAGAAA+AGG | + | chr3.4:97695549-97695568 | MS.gene064739:CDS | 45.0% |
| !! | GTGGGAGAAAAGGTTGATAG+TGG | + | chr3.4:97695559-97695578 | MS.gene064739:CDS | 45.0% |
| ! | ATCGATCGAATTTTGCGGGC+TGG | + | chr3.4:97695433-97695452 | MS.gene064739:CDS | 50.0% |
| !!! | GATCGAATTTTGCGGGCTGG+TGG | + | chr3.4:97695436-97695455 | MS.gene064739:CDS | 55.0% |
| !!! | TGCGGGCTGGTGGTTTGTTT+TGG | + | chr3.4:97695446-97695465 | MS.gene064739:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 97694368 | 97695633 | 97694368 | ID=MS.gene064739 |
| chr3.4 | mRNA | 97694368 | 97695633 | 97694368 | ID=MS.gene064739.t1;Parent=MS.gene064739 |
| chr3.4 | exon | 97694368 | 97695633 | 97694368 | ID=MS.gene064739.t1.exon1;Parent=MS.gene064739.t1 |
| chr3.4 | CDS | 97694368 | 97695633 | 97694368 | ID=cds.MS.gene064739.t1;Parent=MS.gene064739.t1 |
| Gene Sequence |
| Protein sequence |
