Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42277.t1 | XP_013462202.1 | 96.9 | 421 | 13 | 0 | 1 | 421 | 1 | 421 | 9.60E-235 | 822.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42277.t1 | A0A072V314 | 96.9 | 421 | 13 | 0 | 1 | 421 | 1 | 421 | 6.9e-235 | 822.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049758 | MS.gene42277 | 0.82538 | 4.84E-54 | -1.69E-46 |
| MS.gene050438 | MS.gene42277 | 0.815266 | 1.01E-51 | -1.69E-46 |
| MS.gene052207 | MS.gene42277 | 0.829028 | 6.47E-55 | -1.69E-46 |
| MS.gene053836 | MS.gene42277 | 0.825501 | 4.53E-54 | -1.69E-46 |
| MS.gene054473 | MS.gene42277 | 0.8111 | 8.29E-51 | -1.69E-46 |
| MS.gene055390 | MS.gene42277 | 0.806036 | 1.00E-49 | -1.69E-46 |
| MS.gene055422 | MS.gene42277 | 0.815899 | 7.30E-52 | -1.69E-46 |
| MS.gene057260 | MS.gene42277 | 0.800348 | 1.50E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene42277 | MS.gene63991 | PPI |
| MS.gene42277 | MS.gene24186 | PPI |
| MS.gene42277 | MS.gene069406 | PPI |
| MS.gene42277 | MS.gene064739 | PPI |
| MS.gene42277 | MS.gene028330 | PPI |
| MS.gene42277 | MS.gene36460 | PPI |
| MS.gene42277 | MS.gene35128 | PPI |
| MS.gene42277 | MS.gene69420 | PPI |
| MS.gene42277 | MS.gene023122 | PPI |
| MS.gene42277 | MS.gene014442 | PPI |
| MS.gene42277 | MS.gene27044 | PPI |
| MS.gene42277 | MS.gene64194 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42277.t1 | MTR_3g113270 | 96.912 | 421 | 13 | 0 | 1 | 421 | 1 | 421 | 0.0 | 843 |
| MS.gene42277.t1 | MTR_1g024005 | 76.457 | 429 | 88 | 5 | 1 | 420 | 1 | 425 | 0.0 | 654 |
| MS.gene42277.t1 | MTR_3g071050 | 96.604 | 265 | 9 | 0 | 29 | 293 | 1 | 265 | 0.0 | 535 |
| MS.gene42277.t1 | MTR_3g070620 | 97.037 | 135 | 4 | 0 | 225 | 359 | 54 | 188 | 2.80e-91 | 274 |
| MS.gene42277.t1 | MTR_2g028590 | 40.053 | 377 | 208 | 8 | 56 | 419 | 92 | 463 | 1.38e-88 | 276 |
| MS.gene42277.t1 | MTR_2g028610 | 37.123 | 431 | 224 | 11 | 30 | 419 | 34 | 458 | 2.75e-88 | 276 |
| MS.gene42277.t1 | MTR_5g077710 | 42.405 | 316 | 170 | 8 | 113 | 420 | 74 | 385 | 6.39e-86 | 267 |
| MS.gene42277.t1 | MTR_8g028460 | 40.785 | 331 | 175 | 7 | 104 | 420 | 164 | 487 | 8.51e-82 | 260 |
| MS.gene42277.t1 | MTR_0010s0400 | 41.667 | 324 | 172 | 9 | 104 | 421 | 147 | 459 | 1.50e-81 | 258 |
| MS.gene42277.t1 | MTR_4g094572 | 32.847 | 411 | 227 | 9 | 19 | 419 | 4 | 375 | 2.70e-62 | 206 |
| MS.gene42277.t1 | MTR_3g071100 | 97.500 | 40 | 1 | 0 | 205 | 244 | 24 | 63 | 8.16e-22 | 89.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42277.t1 | AT5G40830 | 68.483 | 422 | 124 | 4 | 1 | 421 | 1 | 414 | 0.0 | 595 |
| MS.gene42277.t1 | AT5G40830 | 68.483 | 422 | 124 | 4 | 1 | 421 | 1 | 414 | 0.0 | 595 |
| MS.gene42277.t1 | AT3G27230 | 69.596 | 421 | 117 | 6 | 1 | 421 | 1 | 410 | 0.0 | 594 |
| MS.gene42277.t1 | AT5G40830 | 63.033 | 422 | 107 | 5 | 1 | 421 | 1 | 374 | 0.0 | 532 |
| MS.gene42277.t1 | AT3G05390 | 40.741 | 324 | 175 | 8 | 104 | 421 | 150 | 462 | 1.89e-83 | 263 |
| MS.gene42277.t1 | AT4G01240 | 41.667 | 348 | 173 | 10 | 89 | 420 | 323 | 656 | 2.17e-79 | 258 |
| MS.gene42277.t1 | AT1G29790 | 33.584 | 399 | 233 | 7 | 24 | 419 | 7 | 376 | 5.47e-71 | 228 |
| MS.gene42277.t1 | AT1G29790 | 33.584 | 399 | 233 | 7 | 24 | 419 | 7 | 376 | 5.47e-71 | 228 |
Find 57 sgRNAs with CRISPR-Local
Find 81 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAGGTTTCCAAAGTGAATT+TGG | 0.170193 | 3.2:-90075875 | None:intergenic |
| CATTTCAGTGATTCCAGTTT+TGG | 0.201099 | 3.2:-90075657 | None:intergenic |
| CTGTTCTTCAGAAGCCTGTT+AGG | 0.201673 | 3.2:+90076527 | MS.gene42277:CDS |
| TTAGCAAAACACCTTCTTCT+AGG | 0.243776 | 3.2:-90075815 | None:intergenic |
| TGCTAAATCTGTTTCTTCTA+AGG | 0.249692 | 3.2:+90075832 | MS.gene42277:CDS |
| GGTTCTGTTTCTTTGAAAAT+TGG | 0.270644 | 3.2:+90075293 | MS.gene42277:CDS |
| TTTGATATTGGAATTGGTTC+TGG | 0.272985 | 3.2:+90076100 | MS.gene42277:CDS |
| TCAAAGACATTATCATAAAA+AGG | 0.296087 | 3.2:-90076256 | None:intergenic |
| TTATGATAATGTCTTTGATT+TGG | 0.302543 | 3.2:+90076261 | MS.gene42277:CDS |
| TAACCCTCATAAACTTCCTT+TGG | 0.314405 | 3.2:+90075625 | MS.gene42277:CDS |
| TTGGGTAAAGATTCCAAAAC+TGG | 0.315442 | 3.2:+90075644 | MS.gene42277:CDS |
| TGCGGGCTGGTGGTTTGTTT+TGG | 0.317509 | 3.2:+90076368 | MS.gene42277:CDS |
| TCACTTGTTTACACCCTAAC+AGG | 0.330154 | 3.2:-90076541 | None:intergenic |
| TTGGATACAGAAAATTGAAA+TGG | 0.350308 | 3.2:+90076455 | MS.gene42277:CDS |
| ATAGGATTTGATATTGGAAT+TGG | 0.350657 | 3.2:+90076094 | MS.gene42277:CDS |
| ATTAGAATAGGATTTGATAT+TGG | 0.361463 | 3.2:+90076088 | MS.gene42277:CDS |
| TATATGAATTACAAAGTGTT+TGG | 0.369620 | 3.2:+90075731 | MS.gene42277:CDS |
| TTGGTAACAAGACTGTTAAT+TGG | 0.379100 | 3.2:+90075897 | MS.gene42277:CDS |
| TTGCATGCATTGCTTTGATT+TGG | 0.380204 | 3.2:+90075976 | MS.gene42277:CDS |
| AACCCTCATAAACTTCCTTT+GGG | 0.381617 | 3.2:+90075626 | MS.gene42277:CDS |
| CAAAGTGTTTGGAAATTGTC+AGG | 0.382386 | 3.2:+90075742 | MS.gene42277:CDS |
| TTGGAAATTGTCAGGATGAT+TGG | 0.389503 | 3.2:+90075750 | MS.gene42277:CDS |
| ACAAGGTTGATTGAAAGGTT+TGG | 0.397211 | 3.2:+90076436 | MS.gene42277:CDS |
| GGAAATGGTGGAATTAGAAT+AGG | 0.400305 | 3.2:+90076076 | MS.gene42277:CDS |
| CATTGCTTTGATTTGGTGAA+TGG | 0.407664 | 3.2:+90075983 | MS.gene42277:CDS |
| CAAAACTGGAATCACTGAAA+TGG | 0.411701 | 3.2:+90075658 | MS.gene42277:CDS |
| TTACCCAAAGGAAGTTTATG+AGG | 0.415254 | 3.2:-90075629 | None:intergenic |
| TGGATACAGAAAATTGAAAT+GGG | 0.423072 | 3.2:+90076456 | MS.gene42277:CDS |
| CAGAAAATTGAAATGGGTTG+TGG | 0.423087 | 3.2:+90076462 | MS.gene42277:CDS |
| TTCCAAAGTGAATTTGGAAA+AGG | 0.423351 | 3.2:-90075869 | None:intergenic |
| CATTGACAAGGTTGATTGAA+AGG | 0.426565 | 3.2:+90076431 | MS.gene42277:CDS |
| CTTGGTGAAGTTGTTCGGTT+TGG | 0.435606 | 3.2:-90075442 | None:intergenic |
| TTAACAGTCTTGTTACCAAC+AGG | 0.440808 | 3.2:-90075893 | None:intergenic |
| TGGTAAGAAACAAGAGAAGT+TGG | 0.449209 | 3.2:+90076315 | MS.gene42277:CDS |
| TGTTCTTCAGAAGCCTGTTA+GGG | 0.451195 | 3.2:+90076528 | MS.gene42277:CDS |
| AGAAAATTGAAATGGGTTGT+GGG | 0.464176 | 3.2:+90076463 | MS.gene42277:CDS |
| GTGTACTTGGTGAAGTTGTT+CGG | 0.472086 | 3.2:-90075447 | None:intergenic |
| TGATCCAAGCTTAAGAAAAG+AGG | 0.499670 | 3.2:-90076226 | None:intergenic |
| CACTGAAATGGTTTCATCTG+TGG | 0.507607 | 3.2:+90075670 | MS.gene42277:CDS |
| TGAATGGTTATGAGAATCAA+AGG | 0.511808 | 3.2:+90075999 | MS.gene42277:CDS |
| GCAGCTATAAATTCATTGAA+AGG | 0.519697 | 3.2:-90076190 | None:intergenic |
| GGTTCGTGCTACAAATACCT+TGG | 0.520674 | 3.2:+90076282 | MS.gene42277:CDS |
| AACAAGACTGTTAATTGGAG+TGG | 0.522922 | 3.2:+90075902 | MS.gene42277:CDS |
| AATTCACTTTGGAAACCTGT+TGG | 0.524197 | 3.2:+90075878 | MS.gene42277:CDS |
| GTTTCTTTGAAAATTGGTGA+TGG | 0.525785 | 3.2:+90075299 | MS.gene42277:CDS |
| AAACACCTTCTTCTAGGTAA+AGG | 0.526592 | 3.2:-90075809 | None:intergenic |
| GAAATGGGTTGTGGGAGAAA+AGG | 0.531934 | 3.2:+90076471 | MS.gene42277:CDS |
| GTGGGAGAAAAGGTTGATAG+TGG | 0.534948 | 3.2:+90076481 | MS.gene42277:CDS |
| AATGTTAAGAAATTGAATAG+AGG | 0.538968 | 3.2:+90075953 | MS.gene42277:CDS |
| AATGAATTTATAGCTGCAAG+AGG | 0.548634 | 3.2:+90076196 | MS.gene42277:CDS |
| ACTGAAATGGTTTCATCTGT+GGG | 0.553481 | 3.2:+90075671 | MS.gene42277:CDS |
| TACCCAAAGGAAGTTTATGA+GGG | 0.566733 | 3.2:-90075628 | None:intergenic |
| GTGAGCCTTTACCTAGAAGA+AGG | 0.567293 | 3.2:+90075804 | MS.gene42277:CDS |
| TTGCTGCTGTAATGGCTGAA+AGG | 0.580054 | 3.2:+90076128 | MS.gene42277:CDS |
| AGAAGAAAATTTCATTGACA+AGG | 0.582193 | 3.2:+90076419 | MS.gene42277:CDS |
| CTTACCAACATCATCATCCA+AGG | 0.591615 | 3.2:-90076299 | None:intergenic |
| AATACCTTGGATGATGATGT+TGG | 0.652086 | 3.2:+90076295 | MS.gene42277:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATGTTAAGAAATTGAATAG+AGG | + | chr3.2:90075953-90075972 | MS.gene42277:CDS | 20.0% |
| !! | ATTAGAATAGGATTTGATAT+TGG | + | chr3.2:90076088-90076107 | MS.gene42277:CDS | 20.0% |
| !! | TCAAAGACATTATCATAAAA+AGG | - | chr3.2:90076259-90076278 | None:intergenic | 20.0% |
| !!! | TATATGAATTACAAAGTGTT+TGG | + | chr3.2:90075731-90075750 | MS.gene42277:CDS | 20.0% |
| !!! | TTATGATAATGTCTTTGATT+TGG | + | chr3.2:90076261-90076280 | MS.gene42277:CDS | 20.0% |
| ! | AGAAGAAAATTTCATTGACA+AGG | + | chr3.2:90076419-90076438 | MS.gene42277:CDS | 25.0% |
| ! | ATAGGATTTGATATTGGAAT+TGG | + | chr3.2:90076094-90076113 | MS.gene42277:CDS | 25.0% |
| ! | TGGATACAGAAAATTGAAAT+GGG | + | chr3.2:90076456-90076475 | MS.gene42277:CDS | 25.0% |
| ! | TTGGATACAGAAAATTGAAA+TGG | + | chr3.2:90076455-90076474 | MS.gene42277:CDS | 25.0% |
| !! | AAAAAGATTGGTTGTGATAA+CGG | - | chr3.2:90075387-90075406 | None:intergenic | 25.0% |
| !!! | CTCAGAAATTGATTTTGAAA+GGG | + | chr3.2:90075780-90075799 | MS.gene42277:CDS | 25.0% |
| AATGAATTTATAGCTGCAAG+AGG | + | chr3.2:90076196-90076215 | MS.gene42277:CDS | 30.0% | |
| AGCATAAAGAGCAAAAAGAT+TGG | - | chr3.2:90075399-90075418 | None:intergenic | 30.0% | |
| GCAGCTATAAATTCATTGAA+AGG | - | chr3.2:90076193-90076212 | None:intergenic | 30.0% | |
| TGAATGGTTATGAGAATCAA+AGG | + | chr3.2:90075999-90076018 | MS.gene42277:CDS | 30.0% | |
| TTCCAAAGTGAATTTGGAAA+AGG | - | chr3.2:90075872-90075891 | None:intergenic | 30.0% | |
| ! | ATCCTTTTCCAAATTCACTT+TGG | + | chr3.2:90075867-90075886 | MS.gene42277:CDS | 30.0% |
| ! | GGTTCTGTTTCTTTGAAAAT+TGG | + | chr3.2:90075293-90075312 | MS.gene42277:CDS | 30.0% |
| ! | GTTTCTTTGAAAATTGGTGA+TGG | + | chr3.2:90075299-90075318 | MS.gene42277:CDS | 30.0% |
| ! | TGCTAAATCTGTTTCTTCTA+AGG | + | chr3.2:90075832-90075851 | MS.gene42277:CDS | 30.0% |
| ! | TTAAGCTCTTTTGCAATGTT+GGG | - | chr3.2:90075596-90075615 | None:intergenic | 30.0% |
| ! | TTGGTAACAAGACTGTTAAT+TGG | + | chr3.2:90075897-90075916 | MS.gene42277:CDS | 30.0% |
| ! | TTTAAGCTCTTTTGCAATGT+TGG | - | chr3.2:90075597-90075616 | None:intergenic | 30.0% |
| ! | TTTGATATTGGAATTGGTTC+TGG | + | chr3.2:90076100-90076119 | MS.gene42277:CDS | 30.0% |
| ! | TTTTCCTCTTTTCTTAAGCT+TGG | + | chr3.2:90076222-90076241 | MS.gene42277:CDS | 30.0% |
| ! | TTTTCTTAAGCTTGGATCAT+AGG | + | chr3.2:90076230-90076249 | MS.gene42277:CDS | 30.0% |
| !! | AGAAAATTGAAATGGGTTGT+GGG | + | chr3.2:90076463-90076482 | MS.gene42277:CDS | 30.0% |
| !! | GCTCAGAAATTGATTTTGAA+AGG | + | chr3.2:90075779-90075798 | MS.gene42277:CDS | 30.0% |
| !! | TTTTCTTGCTGATGATGTTT+TGG | + | chr3.2:90076048-90076067 | MS.gene42277:CDS | 30.0% |
| !!! | AAGAAGCTGTTTTTCTATCT+GGG | - | chr3.2:90075546-90075565 | None:intergenic | 30.0% |
| AAACACCTTCTTCTAGGTAA+AGG | - | chr3.2:90075812-90075831 | None:intergenic | 35.0% | |
| AACAAGACTGTTAATTGGAG+TGG | + | chr3.2:90075902-90075921 | MS.gene42277:CDS | 35.0% | |
| AACCCTCATAAACTTCCTTT+GGG | + | chr3.2:90075626-90075645 | MS.gene42277:CDS | 35.0% | |
| ACAGGTTTCCAAAGTGAATT+TGG | - | chr3.2:90075878-90075897 | None:intergenic | 35.0% | |
| ACTGAAATGGTTTCATCTGT+GGG | + | chr3.2:90075671-90075690 | MS.gene42277:CDS | 35.0% | |
| CAAAACTGGAATCACTGAAA+TGG | + | chr3.2:90075658-90075677 | MS.gene42277:CDS | 35.0% | |
| CAGATAGAAAAACAGCTTCT+TGG | + | chr3.2:90075545-90075564 | MS.gene42277:CDS | 35.0% | |
| TAACCCTCATAAACTTCCTT+TGG | + | chr3.2:90075625-90075644 | MS.gene42277:CDS | 35.0% | |
| TACCCAAAGGAAGTTTATGA+GGG | - | chr3.2:90075631-90075650 | None:intergenic | 35.0% | |
| TGATCCAAGCTTAAGAAAAG+AGG | - | chr3.2:90076229-90076248 | None:intergenic | 35.0% | |
| TGGTAAGAAACAAGAGAAGT+TGG | + | chr3.2:90076315-90076334 | MS.gene42277:CDS | 35.0% | |
| TTACCCAAAGGAAGTTTATG+AGG | - | chr3.2:90075632-90075651 | None:intergenic | 35.0% | |
| TTAGCAAAACACCTTCTTCT+AGG | - | chr3.2:90075818-90075837 | None:intergenic | 35.0% | |
| TTGCATGCATTGCTTTGATT+TGG | + | chr3.2:90075976-90075995 | MS.gene42277:CDS | 35.0% | |
| TTGGAAATTGTCAGGATGAT+TGG | + | chr3.2:90075750-90075769 | MS.gene42277:CDS | 35.0% | |
| TTGGGTAAAGATTCCAAAAC+TGG | + | chr3.2:90075644-90075663 | MS.gene42277:CDS | 35.0% | |
| ! | AATACCTTGGATGATGATGT+TGG | + | chr3.2:90076295-90076314 | MS.gene42277:CDS | 35.0% |
| ! | AATTCACTTTGGAAACCTGT+TGG | + | chr3.2:90075878-90075897 | MS.gene42277:CDS | 35.0% |
| ! | ACAAGGTTGATTGAAAGGTT+TGG | + | chr3.2:90076436-90076455 | MS.gene42277:CDS | 35.0% |
| ! | CAAAGTGTTTGGAAATTGTC+AGG | + | chr3.2:90075742-90075761 | MS.gene42277:CDS | 35.0% |
| ! | CATTGACAAGGTTGATTGAA+AGG | + | chr3.2:90076431-90076450 | MS.gene42277:CDS | 35.0% |
| ! | CATTTCAGTGATTCCAGTTT+TGG | - | chr3.2:90075660-90075679 | None:intergenic | 35.0% |
| ! | GAGAGAAGTTTTTGTGTACT+TGG | - | chr3.2:90075463-90075482 | None:intergenic | 35.0% |
| ! | GGAAATGGTGGAATTAGAAT+AGG | + | chr3.2:90076076-90076095 | MS.gene42277:CDS | 35.0% |
| !! | CAGAAAATTGAAATGGGTTG+TGG | + | chr3.2:90076462-90076481 | MS.gene42277:CDS | 35.0% |
| !! | CATTGCTTTGATTTGGTGAA+TGG | + | chr3.2:90075983-90076002 | MS.gene42277:CDS | 35.0% |
| !! | TTAACAGTCTTGTTACCAAC+AGG | - | chr3.2:90075896-90075915 | None:intergenic | 35.0% |
| !!! | CAAGAAGCTGTTTTTCTATC+TGG | - | chr3.2:90075547-90075566 | None:intergenic | 35.0% |
| !!! | GATGTTTTGGCATTAGGAAA+TGG | + | chr3.2:90076061-90076080 | MS.gene42277:CDS | 35.0% |
| !!! | GTTTTGGAATCTTTACCCAA+AGG | - | chr3.2:90075644-90075663 | None:intergenic | 35.0% |
| CACTGAAATGGTTTCATCTG+TGG | + | chr3.2:90075670-90075689 | MS.gene42277:CDS | 40.0% | |
| CTTACCAACATCATCATCCA+AGG | - | chr3.2:90076302-90076321 | None:intergenic | 40.0% | |
| TGTTCTTCAGAAGCCTGTTA+GGG | + | chr3.2:90076528-90076547 | MS.gene42277:CDS | 40.0% | |
| ! | GTGTACTTGGTGAAGTTGTT+CGG | - | chr3.2:90075450-90075469 | None:intergenic | 40.0% |
| ! | TCGACATCGATCGAATTTTG+CGG | + | chr3.2:90076350-90076369 | MS.gene42277:CDS | 40.0% |
| ! | TGGATCTTTTGCTGCTGTAA+TGG | + | chr3.2:90076120-90076139 | MS.gene42277:CDS | 40.0% |
| !! | GTTTTGGCATTAGGAAATGG+TGG | + | chr3.2:90076064-90076083 | MS.gene42277:CDS | 40.0% |
| !!! | GCTGATGATGTTTTGGCATT+AGG | + | chr3.2:90076055-90076074 | MS.gene42277:CDS | 40.0% |
| !!! | GGGCTAGTTTCTTTTGAGAT+TGG | - | chr3.2:90075526-90075545 | None:intergenic | 40.0% |
| !!! | TGTTCGGTTTGGCTGTTTTT+TGG | - | chr3.2:90075434-90075453 | None:intergenic | 40.0% |
| CTGTTCTTCAGAAGCCTGTT+AGG | + | chr3.2:90076527-90076546 | MS.gene42277:CDS | 45.0% | |
| CTTGGTGAAGTTGTTCGGTT+TGG | - | chr3.2:90075445-90075464 | None:intergenic | 45.0% | |
| GGTTCGTGCTACAAATACCT+TGG | + | chr3.2:90076282-90076301 | MS.gene42277:CDS | 45.0% | |
| GTGAGCCTTTACCTAGAAGA+AGG | + | chr3.2:90075804-90075823 | MS.gene42277:CDS | 45.0% | |
| TTGCTGCTGTAATGGCTGAA+AGG | + | chr3.2:90076128-90076147 | MS.gene42277:CDS | 45.0% | |
| ! | CGACATCGATCGAATTTTGC+GGG | + | chr3.2:90076351-90076370 | MS.gene42277:CDS | 45.0% |
| !! | GAAATGGGTTGTGGGAGAAA+AGG | + | chr3.2:90076471-90076490 | MS.gene42277:CDS | 45.0% |
| !! | GTGGGAGAAAAGGTTGATAG+TGG | + | chr3.2:90076481-90076500 | MS.gene42277:CDS | 45.0% |
| ! | ATCGATCGAATTTTGCGGGC+TGG | + | chr3.2:90076355-90076374 | MS.gene42277:CDS | 50.0% |
| !!! | GATCGAATTTTGCGGGCTGG+TGG | + | chr3.2:90076358-90076377 | MS.gene42277:CDS | 55.0% |
| !!! | TGCGGGCTGGTGGTTTGTTT+TGG | + | chr3.2:90076368-90076387 | MS.gene42277:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 90075290 | 90076555 | 90075290 | ID=MS.gene42277 |
| chr3.2 | mRNA | 90075290 | 90076555 | 90075290 | ID=MS.gene42277.t1;Parent=MS.gene42277 |
| chr3.2 | exon | 90075290 | 90076555 | 90075290 | ID=MS.gene42277.t1.exon1;Parent=MS.gene42277.t1 |
| chr3.2 | CDS | 90075290 | 90076555 | 90075290 | ID=cds.MS.gene42277.t1;Parent=MS.gene42277.t1 |
| Gene Sequence |
| Protein sequence |
