Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070273.t1 | XP_003610071.2 | 96.6 | 739 | 24 | 1 | 1 | 739 | 1 | 738 | 0.00E+00 | 1351.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070273.t1 | Q93YU8 | 25.6 | 715 | 466 | 18 | 1 | 678 | 1 | 686 | 2.4e-27 | 125.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070273.t1 | G7JUC3 | 96.6 | 739 | 24 | 1 | 1 | 739 | 1 | 738 | 0.0e+00 | 1351.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049397 | MS.gene070273 | 0.80159 | 8.38E-49 | -1.69E-46 |
| MS.gene049989 | MS.gene070273 | 0.839156 | 1.87E-57 | -1.69E-46 |
| MS.gene050297 | MS.gene070273 | 0.823394 | 1.42E-53 | -1.69E-46 |
| MS.gene05054 | MS.gene070273 | 0.806103 | 9.68E-50 | -1.69E-46 |
| MS.gene051629 | MS.gene070273 | 0.802839 | 4.64E-49 | -1.69E-46 |
| MS.gene051816 | MS.gene070273 | 0.802893 | 4.52E-49 | -1.69E-46 |
| MS.gene051955 | MS.gene070273 | 0.86296 | 3.50E-64 | -1.69E-46 |
| MS.gene052308 | MS.gene070273 | 0.801705 | 7.94E-49 | -1.69E-46 |
| MS.gene052367 | MS.gene070273 | 0.835338 | 1.78E-56 | -1.69E-46 |
| MS.gene053348 | MS.gene070273 | 0.829452 | 5.11E-55 | -1.69E-46 |
| MS.gene053416 | MS.gene070273 | 0.804615 | 1.98E-49 | -1.69E-46 |
| MS.gene053417 | MS.gene070273 | 0.802179 | 6.34E-49 | -1.69E-46 |
| MS.gene05369 | MS.gene070273 | 0.802746 | 4.85E-49 | -1.69E-46 |
| MS.gene055308 | MS.gene070273 | 0.849871 | 2.45E-60 | -1.69E-46 |
| MS.gene055578 | MS.gene070273 | 0.842624 | 2.31E-58 | -1.69E-46 |
| MS.gene055579 | MS.gene070273 | 0.827013 | 1.98E-54 | -1.69E-46 |
| MS.gene055957 | MS.gene070273 | 0.840208 | 9.99E-58 | -1.69E-46 |
| MS.gene056041 | MS.gene070273 | 0.867323 | 1.49E-65 | -1.69E-46 |
| MS.gene056042 | MS.gene070273 | 0.821369 | 4.19E-53 | -1.69E-46 |
| MS.gene05640 | MS.gene070273 | 0.814962 | 1.18E-51 | -1.69E-46 |
| MS.gene056526 | MS.gene070273 | 0.810044 | 1.40E-50 | -1.69E-46 |
| MS.gene058196 | MS.gene070273 | 0.858147 | 1.01E-62 | -1.69E-46 |
| MS.gene058197 | MS.gene070273 | 0.836981 | 6.80E-57 | -1.69E-46 |
| MS.gene058198 | MS.gene070273 | 0.838448 | 2.86E-57 | -1.69E-46 |
| MS.gene058853 | MS.gene070273 | 0.825343 | 4.94E-54 | -1.69E-46 |
| MS.gene059300 | MS.gene070273 | 0.833916 | 4.05E-56 | -1.69E-46 |
| MS.gene060473 | MS.gene070273 | 0.869476 | 3.01E-66 | -1.69E-46 |
| MS.gene060565 | MS.gene070273 | 0.87191 | 4.77E-67 | -1.69E-46 |
| MS.gene06057 | MS.gene070273 | 0.825718 | 4.02E-54 | -1.69E-46 |
| MS.gene060825 | MS.gene070273 | 0.800675 | 1.29E-48 | -1.69E-46 |
| MS.gene06093 | MS.gene070273 | 0.800856 | 1.18E-48 | -1.69E-46 |
| MS.gene061099 | MS.gene070273 | 0.849467 | 3.17E-60 | -1.69E-46 |
| MS.gene061260 | MS.gene070273 | 0.864548 | 1.12E-64 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070273.t1 | MTR_4g127620 | 97.023 | 739 | 21 | 1 | 1 | 739 | 1 | 738 | 0.0 | 1494 |
| MS.gene070273.t1 | MTR_2g036920 | 63.296 | 534 | 153 | 9 | 238 | 734 | 365 | 892 | 0.0 | 596 |
| MS.gene070273.t1 | MTR_2g036920 | 52.924 | 342 | 108 | 9 | 1 | 293 | 1 | 338 | 1.57e-92 | 308 |
| MS.gene070273.t1 | MTR_2g036920 | 63.296 | 534 | 153 | 9 | 238 | 734 | 394 | 921 | 0.0 | 596 |
| MS.gene070273.t1 | MTR_2g036920 | 48.787 | 371 | 108 | 10 | 1 | 293 | 1 | 367 | 1.66e-87 | 295 |
| MS.gene070273.t1 | MTR_5g087740 | 29.173 | 713 | 402 | 22 | 1 | 660 | 1 | 663 | 2.56e-67 | 237 |
| MS.gene070273.t1 | MTR_3g078830 | 29.081 | 729 | 398 | 24 | 1 | 660 | 1 | 679 | 2.63e-62 | 223 |
| MS.gene070273.t1 | MTR_8g091250 | 35.813 | 363 | 192 | 7 | 330 | 660 | 262 | 615 | 9.91e-56 | 203 |
| MS.gene070273.t1 | MTR_8g091250 | 36.290 | 124 | 74 | 2 | 1 | 119 | 1 | 124 | 3.29e-11 | 67.4 |
| MS.gene070273.t1 | MTR_5g098980 | 30.686 | 554 | 324 | 19 | 174 | 720 | 233 | 733 | 1.85e-50 | 189 |
| MS.gene070273.t1 | MTR_3g088190 | 33.528 | 343 | 194 | 6 | 337 | 660 | 455 | 782 | 2.77e-49 | 187 |
| MS.gene070273.t1 | MTR_1g112850 | 34.104 | 346 | 196 | 9 | 338 | 663 | 276 | 609 | 9.08e-49 | 184 |
| MS.gene070273.t1 | MTR_3g096950 | 27.938 | 519 | 273 | 20 | 174 | 673 | 234 | 670 | 1.10e-36 | 148 |
| MS.gene070273.t1 | MTR_5g022530 | 28.779 | 344 | 223 | 7 | 327 | 663 | 195 | 523 | 6.53e-34 | 138 |
| MS.gene070273.t1 | MTR_3g115120 | 26.897 | 435 | 242 | 11 | 338 | 725 | 277 | 682 | 1.03e-33 | 138 |
| MS.gene070273.t1 | MTR_3g109450 | 28.875 | 329 | 211 | 8 | 338 | 660 | 277 | 588 | 3.13e-33 | 137 |
| MS.gene070273.t1 | MTR_2g102050 | 28.701 | 331 | 213 | 6 | 336 | 660 | 320 | 633 | 4.19e-33 | 137 |
| MS.gene070273.t1 | MTR_2g102050 | 54.545 | 55 | 25 | 0 | 1 | 55 | 1 | 55 | 2.76e-11 | 67.4 |
| MS.gene070273.t1 | MTR_4g012430 | 29.326 | 341 | 204 | 10 | 333 | 663 | 120 | 433 | 1.32e-29 | 124 |
| MS.gene070273.t1 | MTR_2g048360 | 25.281 | 356 | 224 | 8 | 324 | 665 | 196 | 523 | 4.86e-27 | 117 |
| MS.gene070273.t1 | MTR_8g006850 | 28.571 | 273 | 177 | 5 | 331 | 597 | 272 | 532 | 3.68e-24 | 108 |
| MS.gene070273.t1 | MTR_7g081705 | 34.483 | 174 | 107 | 2 | 424 | 597 | 492 | 658 | 5.86e-24 | 108 |
| MS.gene070273.t1 | MTR_1g107440 | 53.247 | 77 | 36 | 0 | 421 | 497 | 5 | 81 | 2.38e-22 | 93.2 |
| MS.gene070273.t1 | MTR_4g094688 | 41.837 | 98 | 54 | 1 | 422 | 519 | 923 | 1017 | 7.06e-13 | 72.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070273.t1 | AT4G30130 | 50.458 | 765 | 292 | 20 | 1 | 727 | 1 | 716 | 0.0 | 630 |
| MS.gene070273.t1 | AT4G30130 | 50.458 | 765 | 292 | 20 | 1 | 727 | 1 | 716 | 0.0 | 630 |
| MS.gene070273.t1 | AT2G19090 | 49.445 | 811 | 310 | 23 | 1 | 725 | 1 | 797 | 0.0 | 625 |
| MS.gene070273.t1 | AT4G30130 | 51.386 | 541 | 196 | 16 | 1 | 519 | 1 | 496 | 2.54e-141 | 426 |
| MS.gene070273.t1 | AT4G30130 | 51.386 | 541 | 196 | 16 | 1 | 519 | 1 | 496 | 2.54e-141 | 426 |
| MS.gene070273.t1 | AT2G27090 | 27.078 | 794 | 433 | 23 | 1 | 722 | 1 | 720 | 1.97e-64 | 228 |
| MS.gene070273.t1 | AT2G27090 | 27.078 | 794 | 433 | 23 | 1 | 722 | 1 | 720 | 1.97e-64 | 228 |
| MS.gene070273.t1 | AT2G17110 | 26.362 | 789 | 450 | 19 | 1 | 727 | 1 | 720 | 1.33e-60 | 218 |
| MS.gene070273.t1 | AT4G35240 | 30.835 | 587 | 332 | 16 | 104 | 659 | 193 | 736 | 2.58e-59 | 216 |
| MS.gene070273.t1 | AT4G35240 | 30.835 | 587 | 332 | 16 | 104 | 659 | 193 | 736 | 2.58e-59 | 216 |
| MS.gene070273.t1 | AT4G35240 | 30.730 | 589 | 334 | 16 | 102 | 659 | 191 | 736 | 2.59e-59 | 216 |
| MS.gene070273.t1 | AT4G35240 | 30.730 | 589 | 334 | 16 | 102 | 659 | 191 | 736 | 2.59e-59 | 216 |
| MS.gene070273.t1 | AT1G77500 | 29.887 | 619 | 347 | 20 | 176 | 738 | 256 | 843 | 1.30e-57 | 211 |
| MS.gene070273.t1 | AT1G21740 | 33.705 | 359 | 214 | 8 | 314 | 660 | 477 | 823 | 1.01e-51 | 194 |
| MS.gene070273.t1 | AT4G39790 | 32.222 | 450 | 222 | 11 | 330 | 739 | 245 | 651 | 3.34e-50 | 187 |
| MS.gene070273.t1 | AT1G20530 | 30.273 | 403 | 241 | 12 | 336 | 722 | 231 | 609 | 2.85e-38 | 151 |
| MS.gene070273.t1 | AT3G51290 | 30.084 | 359 | 212 | 11 | 327 | 670 | 191 | 525 | 1.23e-36 | 147 |
| MS.gene070273.t1 | AT3G51290 | 30.084 | 359 | 212 | 11 | 327 | 670 | 191 | 525 | 1.37e-36 | 147 |
| MS.gene070273.t1 | AT3G51290 | 29.248 | 359 | 209 | 12 | 327 | 670 | 191 | 519 | 3.30e-32 | 133 |
| MS.gene070273.t1 | AT1G52320 | 29.586 | 338 | 215 | 9 | 337 | 668 | 24 | 344 | 5.45e-32 | 130 |
| MS.gene070273.t1 | AT1G52320 | 29.586 | 338 | 215 | 9 | 337 | 668 | 24 | 344 | 5.45e-32 | 130 |
| MS.gene070273.t1 | AT1G52320 | 29.290 | 338 | 216 | 8 | 337 | 668 | 327 | 647 | 7.98e-32 | 133 |
| MS.gene070273.t1 | AT1G52320 | 29.290 | 338 | 216 | 8 | 337 | 668 | 350 | 670 | 1.12e-31 | 132 |
| MS.gene070273.t1 | AT1G52320 | 29.290 | 338 | 216 | 8 | 337 | 668 | 350 | 670 | 1.12e-31 | 132 |
| MS.gene070273.t1 | AT5G25590 | 28.788 | 330 | 212 | 6 | 337 | 660 | 330 | 642 | 4.32e-31 | 130 |
| MS.gene070273.t1 | AT5G25590 | 56.364 | 55 | 24 | 0 | 1 | 55 | 1 | 55 | 7.33e-11 | 66.2 |
| MS.gene070273.t1 | AT5G54480 | 26.586 | 331 | 192 | 9 | 352 | 670 | 336 | 627 | 3.93e-29 | 124 |
| MS.gene070273.t1 | AT3G60320 | 31.907 | 257 | 161 | 4 | 424 | 678 | 442 | 686 | 8.06e-28 | 120 |
| MS.gene070273.t1 | AT1G02110 | 29.755 | 326 | 196 | 8 | 334 | 649 | 268 | 570 | 1.05e-26 | 116 |
| MS.gene070273.t1 | AT2G34670 | 29.918 | 244 | 156 | 4 | 421 | 663 | 334 | 563 | 8.45e-21 | 97.8 |
| MS.gene070273.t1 | AT2G34670 | 28.926 | 242 | 157 | 4 | 421 | 661 | 334 | 561 | 5.90e-19 | 91.7 |
Find 159 sgRNAs with CRISPR-Local
Find 216 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATCGATTGCAATTTCTTTA+TGG | 0.119576 | 8.2:-5772781 | None:intergenic |
| GGAGGAGTTTACATCAATTT+TGG | 0.191505 | 8.2:-5772591 | None:intergenic |
| TCCCCTTCTAACGAACTTTC+AGG | 0.200168 | 8.2:+5772968 | MS.gene070273:CDS |
| CTTCTCAATGGGATTCCTTT+TGG | 0.207462 | 8.2:+5772378 | MS.gene070273:CDS |
| TTCAACCATGACTTCTTCTT+TGG | 0.230776 | 8.2:-5772612 | None:intergenic |
| GTCTCAACTCGAACCATTTC+GGG | 0.235236 | 8.2:-5772230 | None:intergenic |
| CATCCATTTCTTCCTGTTCC+AGG | 0.241920 | 8.2:-5772520 | None:intergenic |
| ACTTTCAAAGTTGTAGTATT+AGG | 0.290954 | 8.2:-5772149 | None:intergenic |
| GGATAAGTATTGAGCTTTCT+TGG | 0.292019 | 8.2:-5772948 | None:intergenic |
| TGTCTCAACTCGAACCATTT+CGG | 0.297245 | 8.2:-5772231 | None:intergenic |
| ATGTTTGCTTCTGTGTTTGA+TGG | 0.306022 | 8.2:-5774419 | None:intergenic |
| AAACCGAAGGCCGGCAAATA+TGG | 0.311425 | 8.2:+5772847 | MS.gene070273:CDS |
| ATTATTATACCTTGACTTCC+TGG | 0.317166 | 8.2:-5773404 | None:intergenic |
| TCTTAACTGTTGTGCATAGA+AGG | 0.324661 | 8.2:-5774802 | None:intergenic |
| TCTCCAACAACAATTGAGTT+TGG | 0.325353 | 8.2:+5772125 | MS.gene070273:CDS |
| ATCACTTCAGCCATATTTGC+CGG | 0.325423 | 8.2:-5772857 | None:intergenic |
| TGTTCAAGGCTACTTCCATT+AGG | 0.329746 | 8.2:-5772434 | None:intergenic |
| GGTTGGATCCAATGTGAATA+TGG | 0.334000 | 8.2:+5774848 | MS.gene070273:CDS |
| CTGAGGAACCATGATATAAA+AGG | 0.335201 | 8.2:+5773669 | MS.gene070273:CDS |
| TTTACATCGTTGGACTATTT+CGG | 0.335436 | 8.2:+5772407 | MS.gene070273:CDS |
| CCTCAATTCGGTTTCAAGAT+TGG | 0.336991 | 8.2:-5774535 | None:intergenic |
| AAATAGTCCAACGATGTAAA+AGG | 0.338971 | 8.2:-5772404 | None:intergenic |
| AGTTATGGAGGTTGCTGTTA+AGG | 0.351789 | 8.2:+5774902 | MS.gene070273:CDS |
| ATTTCTTCCTGTTCCAGGTC+TGG | 0.356927 | 8.2:-5772515 | None:intergenic |
| GACTATTTCGGTTACCCTAA+TGG | 0.364273 | 8.2:+5772419 | MS.gene070273:CDS |
| AGCTCTACTCACCCGTTGTT+TGG | 0.365593 | 8.2:+5774690 | MS.gene070273:CDS |
| TCCTACATTCACGCACTAAC+TGG | 0.370767 | 8.2:+5774600 | MS.gene070273:CDS |
| ATCTCAATCTTCAGGTCATA+TGG | 0.371693 | 8.2:+5772751 | MS.gene070273:CDS |
| GTATCAAAATCTCAATCTTC+AGG | 0.371875 | 8.2:+5772743 | MS.gene070273:CDS |
| GCTGAGCGTGCGAGCCTGTA+TGG | 0.385690 | 8.2:-5774510 | None:intergenic |
| GTTCAAGGCTACTTCCATTA+GGG | 0.385955 | 8.2:-5772433 | None:intergenic |
| CAGCCATATTTGCCGGCCTT+CGG | 0.400928 | 8.2:-5772850 | None:intergenic |
| AAATATGGCTGAAGTGATAA+AGG | 0.406334 | 8.2:+5772862 | MS.gene070273:CDS |
| TAGCCTTGAACATATTGTTA+TGG | 0.408133 | 8.2:+5772445 | MS.gene070273:CDS |
| TATTCTCCAGTGTACCAATA+TGG | 0.409306 | 8.2:+5772254 | MS.gene070273:CDS |
| GGCCTTTCCTCGACTGAAAT+CGG | 0.409761 | 8.2:-5772200 | None:intergenic |
| TGATGTCTCGGCATTGTTAG+AGG | 0.410848 | 8.2:+5772925 | MS.gene070273:CDS |
| AACCATGACTTCTTCTTTGG+AGG | 0.411358 | 8.2:-5772609 | None:intergenic |
| AAACCTGAAAGTTCGTTAGA+AGG | 0.412814 | 8.2:-5772971 | None:intergenic |
| CAGGAGAATTGAAACCTTGA+GGG | 0.413268 | 8.2:+5773785 | MS.gene070273:CDS |
| AAGCACCGCTGTTTCTTGTA+AGG | 0.413962 | 8.2:-5774745 | None:intergenic |
| ACTCAGTTGAAGCTATTTCC+AGG | 0.415086 | 8.2:+5773766 | MS.gene070273:CDS |
| TTCACCTCAGTCTTCTCAAT+GGG | 0.421196 | 8.2:+5772367 | MS.gene070273:CDS |
| GCCTTTGTGTTCAGTGGTCA+AGG | 0.423465 | 8.2:+5774712 | MS.gene070273:CDS |
| GGTGAAGCGGGAGGGATAAC+AGG | 0.425517 | 8.2:-5772350 | None:intergenic |
| CTCGAACCTTCCTCAGTCCT+CGG | 0.435717 | 8.2:-5772478 | None:intergenic |
| AGACCTGGAACAGGAAGAAA+TGG | 0.440144 | 8.2:+5772517 | MS.gene070273:CDS |
| AAGGCCTCCGTCACCCGAAA+TGG | 0.442461 | 8.2:+5772217 | MS.gene070273:CDS |
| AACAGTCAGGAACACGTGTT+CGG | 0.454457 | 8.2:+5773619 | MS.gene070273:intron |
| TAAGGTTGGAGAAGAAGTTA+TGG | 0.455241 | 8.2:+5774887 | MS.gene070273:CDS |
| CTTTGAAAGTGAATTATTTG+AGG | 0.455442 | 8.2:+5772162 | MS.gene070273:CDS |
| CCTCAAGGTTTCAATTCTCC+TGG | 0.457406 | 8.2:-5773784 | None:intergenic |
| CAATGAACTTGTTAAACAAT+GGG | 0.462956 | 8.2:+5774995 | MS.gene070273:CDS |
| CATCCATAACAATATGTTCA+AGG | 0.464818 | 8.2:-5772448 | None:intergenic |
| GTTTCGCCAGTTCCTCAATT+CGG | 0.465546 | 8.2:-5774547 | None:intergenic |
| TTGAAACCGAATTGAGGAAC+TGG | 0.469607 | 8.2:+5774541 | MS.gene070273:CDS |
| AACCTGAAAGTTCGTTAGAA+GGG | 0.470672 | 8.2:-5772970 | None:intergenic |
| GAACACAAAGGCCAAACAAC+GGG | 0.472307 | 8.2:-5774701 | None:intergenic |
| CTTGCAGCAATTCAAGAAGC+TGG | 0.472323 | 8.2:-5773824 | None:intergenic |
| TTGCTTATTCTCCGAATGAC+AGG | 0.474450 | 8.2:+5772327 | MS.gene070273:CDS |
| CATAGAACTCAGTTTGCAAA+TGG | 0.474598 | 8.2:+5771942 | MS.gene070273:CDS |
| GGGATAACAGGCCTGTCATT+CGG | 0.477334 | 8.2:-5772338 | None:intergenic |
| ATGGTGGAAGTTGCTAAGGT+TGG | 0.479385 | 8.2:+5774873 | MS.gene070273:CDS |
| CAATTCGGTTTCAAGATTGG+AGG | 0.479544 | 8.2:-5774532 | None:intergenic |
| TAACAATGCCGAGACATCAT+TGG | 0.485532 | 8.2:-5772921 | None:intergenic |
| GGTCCAAACTCAATTGTTGT+TGG | 0.486319 | 8.2:-5772128 | None:intergenic |
| CACCATTTCCATATTCACAT+TGG | 0.488738 | 8.2:-5774856 | None:intergenic |
| TGAAGATGTTGATAAACATA+AGG | 0.490879 | 8.2:+5772631 | MS.gene070273:CDS |
| AGGAAGGTTCGAGAAGAAGA+AGG | 0.490909 | 8.2:+5772488 | MS.gene070273:CDS |
| AGGGATACCAGACCTGGAAC+AGG | 0.500194 | 8.2:+5772508 | MS.gene070273:CDS |
| ATCCAATGTGAATATGGAAA+TGG | 0.501370 | 8.2:+5774854 | MS.gene070273:CDS |
| CTTCACCTCAGTCTTCTCAA+TGG | 0.501893 | 8.2:+5772366 | MS.gene070273:CDS |
| TGAGAAGACTGAGGTGAAGC+GGG | 0.502167 | 8.2:-5772362 | None:intergenic |
| AATGCCGGCTATAAGAATCT+TGG | 0.502528 | 8.2:-5774451 | None:intergenic |
| CATATTAACTTAGATGCATC+GGG | 0.502954 | 8.2:-5774651 | None:intergenic |
| TAAGGAGGAAGAGAAAGAGA+AGG | 0.504381 | 8.2:+5772649 | MS.gene070273:CDS |
| GGACTAGCTTTGTTCTTCGC+AGG | 0.505237 | 8.2:-5772071 | None:intergenic |
| CTAGCTTTGTTCTTCGCAGG+TGG | 0.510885 | 8.2:-5772068 | None:intergenic |
| AAGTTCATTGTATCCCTTAG+CGG | 0.512351 | 8.2:-5774982 | None:intergenic |
| ATATCAGACTCGAAAATCAA+TGG | 0.514821 | 8.2:+5772704 | MS.gene070273:CDS |
| CCAGGAGAATTGAAACCTTG+AGG | 0.523014 | 8.2:+5773784 | MS.gene070273:CDS |
| GCATATTAACTTAGATGCAT+CGG | 0.523698 | 8.2:-5774652 | None:intergenic |
| ACATTCACGCACTAACTGGC+TGG | 0.524842 | 8.2:+5774604 | MS.gene070273:CDS |
| TCCAGTGTACCAATATGGTA+TGG | 0.525140 | 8.2:+5772259 | MS.gene070273:CDS |
| TCTGCACAAAATACAACGGT+TGG | 0.528872 | 8.2:+5774831 | MS.gene070273:CDS |
| GGTTGGAGAAGAAGTTATGG+AGG | 0.530749 | 8.2:+5774890 | MS.gene070273:CDS |
| CGTCGATAACTGATCCATAC+AGG | 0.532942 | 8.2:+5774496 | MS.gene070273:CDS |
| GTCACCAGTCAACATTAGAC+AGG | 0.533014 | 8.2:+5773355 | MS.gene070273:CDS |
| GTTTGCTATTGACTCCGCTA+AGG | 0.535922 | 8.2:+5774968 | MS.gene070273:CDS |
| AACACACAATGTTCCTCTGA+TGG | 0.538021 | 8.2:-5773324 | None:intergenic |
| ATGGGAGAAGAAGCTCTACC+AGG | 0.538736 | 8.2:+5773386 | MS.gene070273:CDS |
| CCAATCTTGAAACCGAATTG+AGG | 0.541596 | 8.2:+5774535 | MS.gene070273:CDS |
| ACAATGAACTTGTTAAACAA+TGG | 0.543788 | 8.2:+5774994 | MS.gene070273:CDS |
| TGAGTAGAGCTAGACCTTCG+AGG | 0.546467 | 8.2:-5774678 | None:intergenic |
| AAATTGACGCATTCATAGGC+GGG | 0.548064 | 8.2:-5772304 | None:intergenic |
| AGCTTCTTGAATTGCTGCAA+GGG | 0.552648 | 8.2:+5773826 | MS.gene070273:CDS |
| CAATGCAGCCAATGATGTCT+CGG | 0.552658 | 8.2:+5772913 | MS.gene070273:CDS |
| CTCCTCCAAAGAAGAAGTCA+TGG | 0.553434 | 8.2:+5772607 | MS.gene070273:CDS |
| GTGCAACTCTTCATCCCTCA+AGG | 0.556618 | 8.2:-5773799 | None:intergenic |
| GAAGCTCTACCAGGAAGTCA+AGG | 0.559948 | 8.2:+5773395 | MS.gene070273:CDS |
| CAGCTTCTTGAATTGCTGCA+AGG | 0.560120 | 8.2:+5773825 | MS.gene070273:CDS |
| GTGTACCAATATGGTATGGA+TGG | 0.560668 | 8.2:+5772263 | MS.gene070273:CDS |
| CATTAGACAGGTTATATGCA+TGG | 0.561365 | 8.2:+5773367 | MS.gene070273:CDS |
| CGATGTAAAAGGATTCCAAA+AGG | 0.564604 | 8.2:-5772393 | None:intergenic |
| TTTGCTATTGACTCCGCTAA+GGG | 0.566353 | 8.2:+5774969 | MS.gene070273:CDS |
| TCCATACCATATTGGTACAC+TGG | 0.567008 | 8.2:-5772260 | None:intergenic |
| ATAACCTGTCTAATGTTGAC+TGG | 0.569071 | 8.2:-5773359 | None:intergenic |
| GCCAGTTAGTGCGTGAATGT+AGG | 0.569376 | 8.2:-5774601 | None:intergenic |
| AATCGATACTGAAGAAGCTA+AGG | 0.570210 | 8.2:+5772796 | MS.gene070273:CDS |
| TTCGATATCGAAATGACTGC+AGG | 0.572417 | 8.2:-5772092 | None:intergenic |
| CAATGTGAATATGGAAATGG+TGG | 0.572421 | 8.2:+5774857 | MS.gene070273:CDS |
| AGAAGAAATGTCTGCAACTG+AGG | 0.574182 | 8.2:+5773652 | MS.gene070273:CDS |
| TGTTTATGTAAACCGAAGGC+CGG | 0.574887 | 8.2:+5772838 | MS.gene070273:CDS |
| ACCTGAAAGTTCGTTAGAAG+GGG | 0.575261 | 8.2:-5772969 | None:intergenic |
| GCTGTTAAGGTACTCTGTGG+TGG | 0.576480 | 8.2:+5774915 | MS.gene070273:CDS |
| TTGCAGCAATTCAAGAAGCT+GGG | 0.577105 | 8.2:-5773823 | None:intergenic |
| CACCGATTTCAGTCGAGGAA+AGG | 0.578232 | 8.2:+5772198 | MS.gene070273:CDS |
| GGAAATGGTGGAAGTTGCTA+AGG | 0.578471 | 8.2:+5774869 | MS.gene070273:CDS |
| ACTCGAACCATTTCGGGTGA+CGG | 0.580259 | 8.2:-5772224 | None:intergenic |
| ATTAGACAGGTTATATGCAT+GGG | 0.580876 | 8.2:+5773368 | MS.gene070273:CDS |
| AGTTAATATGCTCTCCTCGA+AGG | 0.586136 | 8.2:+5774664 | MS.gene070273:CDS |
| TTGAGAAGACTGAGGTGAAG+CGG | 0.590773 | 8.2:-5772363 | None:intergenic |
| TTACTGTTTATGTAAACCGA+AGG | 0.590995 | 8.2:+5772834 | MS.gene070273:CDS |
| GTCAAGTGCTATGAGCTCAA+TGG | 0.592133 | 8.2:+5774941 | MS.gene070273:CDS |
| GGAAGGTTCGAGAAGAAGAA+GGG | 0.594553 | 8.2:+5772489 | MS.gene070273:CDS |
| TGAGAACCGAGGACTGAGGA+AGG | 0.596815 | 8.2:+5772472 | MS.gene070273:CDS |
| AGATGTTGATAAACATAAGG+AGG | 0.598207 | 8.2:+5772634 | MS.gene070273:CDS |
| TCAAACACAGAAGCAAACAT+TGG | 0.599348 | 8.2:+5774422 | MS.gene070273:CDS |
| GAAATCGGTGGATTACCACT+TGG | 0.601145 | 8.2:-5772185 | None:intergenic |
| AAGGAGGAAGAGAAAGAGAA+GGG | 0.601204 | 8.2:+5772650 | MS.gene070273:CDS |
| TGTTTGGCCTTTGTGTTCAG+TGG | 0.601455 | 8.2:+5774706 | MS.gene070273:CDS |
| AATTGACGCATTCATAGGCG+GGG | 0.602603 | 8.2:-5772303 | None:intergenic |
| GTGAATTATTTGAGGCCAAG+TGG | 0.603881 | 8.2:+5772170 | MS.gene070273:CDS |
| AGGAGAGGAACCTTCGTCTG+TGG | 0.604715 | 8.2:+5773689 | MS.gene070273:CDS |
| AGCAAAGATGTGGAAAGTGA+TGG | 0.606900 | 8.2:+5774389 | MS.gene070273:CDS |
| AAGACTGAGGTGAAGCGGGA+GGG | 0.614600 | 8.2:-5772358 | None:intergenic |
| GAACCATGATATAAAAGGAG+AGG | 0.617114 | 8.2:+5773674 | MS.gene070273:CDS |
| GAAGCCAAGATTCTTATAGC+CGG | 0.625185 | 8.2:+5774447 | MS.gene070273:CDS |
| AAAATTGACGCATTCATAGG+CGG | 0.627932 | 8.2:-5772305 | None:intergenic |
| GAAGACTGAGGTGAAGCGGG+AGG | 0.628225 | 8.2:-5772359 | None:intergenic |
| AGAAGAAGGGATACCAGACC+TGG | 0.631503 | 8.2:+5772502 | MS.gene070273:CDS |
| GAAATGGATGATGAACAAGA+AGG | 0.633351 | 8.2:+5772533 | MS.gene070273:CDS |
| ACTACAGGCTAGCAAAGATG+TGG | 0.637551 | 8.2:+5774379 | MS.gene070273:intron |
| TAATCCACCGATTTCAGTCG+AGG | 0.639398 | 8.2:+5772193 | MS.gene070273:CDS |
| CTTTCCTCGACTGAAATCGG+TGG | 0.660282 | 8.2:-5772197 | None:intergenic |
| TGAACACAAAGGCCAAACAA+CGG | 0.660372 | 8.2:-5774702 | None:intergenic |
| GAAGCTAAGGAAGAAACACC+TGG | 0.678158 | 8.2:+5772809 | MS.gene070273:CDS |
| AGTTTATGATGATCCATCAG+AGG | 0.678961 | 8.2:+5773311 | MS.gene070273:CDS |
| CGAACCATTTCGGGTGACGG+AGG | 0.683013 | 8.2:-5772221 | None:intergenic |
| TTTACATAAACAGTAAAACC+AGG | 0.706181 | 8.2:-5772827 | None:intergenic |
| GAATCCCATTGAGAAGACTG+AGG | 0.719517 | 8.2:-5772371 | None:intergenic |
| GTTGCTGTTAAGGTACTCTG+TGG | 0.721032 | 8.2:+5774912 | MS.gene070273:CDS |
| GTTATGGATGATGAGAACCG+AGG | 0.728243 | 8.2:+5772461 | MS.gene070273:CDS |
| AGATGCCTTACAAGAAACAG+CGG | 0.730541 | 8.2:+5774740 | MS.gene070273:CDS |
| TCAGACTCGAAAATCAATGG+CGG | 0.731467 | 8.2:+5772707 | MS.gene070273:CDS |
| AGATTCTGCACAAAATACAA+CGG | 0.732120 | 8.2:+5774827 | MS.gene070273:CDS |
| ATGATGAGAACCGAGGACTG+AGG | 0.737190 | 8.2:+5772468 | MS.gene070273:CDS |
| GCCTTGACCACTGAACACAA+AGG | 0.740438 | 8.2:-5774713 | None:intergenic |
| GAAGTTGCAGCAAAATTGTG+AGG | 0.741434 | 8.2:+5775025 | MS.gene070273:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTCATACTATATTAATAAT+AGG | + | chr8.2:5773566-5773585 | MS.gene070273:intron | 10.0% |
| !!! | AAATTTGTTATAATTTTTGA+CGG | - | chr8.2:5773273-5773292 | None:intergenic | 10.0% |
| !!! | AAAATATACTGTGTTTTTAA+CGG | + | chr8.2:5774250-5774269 | MS.gene070273:intron | 15.0% |
| !!! | AACAAATTTTTCAAAAACTA+GGG | + | chr8.2:5773284-5773303 | MS.gene070273:CDS | 15.0% |
| !!! | AATTTGTTATAATTTTTGAC+GGG | - | chr8.2:5773272-5773291 | None:intergenic | 15.0% |
| !!! | TAACAAATTTTTCAAAAACT+AGG | + | chr8.2:5773283-5773302 | MS.gene070273:CDS | 15.0% |
| !!! | TGATTATTTTAAAGAAAATG+AGG | + | chr8.2:5772013-5772032 | MS.gene070273:CDS | 15.0% |
| !! | ATAAATTCAATTGTTGAAGT+TGG | - | chr8.2:5773483-5773502 | None:intergenic | 20.0% |
| !! | TAAGATATATCACACTATAT+TGG | + | chr8.2:5774308-5774327 | MS.gene070273:intron | 20.0% |
| !! | TAGAATACATAGCATTAATT+GGG | + | chr8.2:5774065-5774084 | MS.gene070273:intron | 20.0% |
| !! | TTAGAATACATAGCATTAAT+TGG | + | chr8.2:5774064-5774083 | MS.gene070273:intron | 20.0% |
| !!! | ATGGGTTAAAAATAACATAA+AGG | - | chr8.2:5773919-5773938 | None:intergenic | 20.0% |
| !!! | ATTTGTTATAATTTTTGACG+GGG | - | chr8.2:5773271-5773290 | None:intergenic | 20.0% |
| ! | AAATAGGTATATAACCTTCT+AGG | - | chr8.2:5774131-5774150 | None:intergenic | 25.0% |
| ! | AATAGGTATATAACCTTCTA+GGG | - | chr8.2:5774130-5774149 | None:intergenic | 25.0% |
| ! | ACTTTCAAAGTTGTAGTATT+AGG | - | chr8.2:5772152-5772171 | None:intergenic | 25.0% |
| ! | AGAATACATAGCATTAATTG+GGG | + | chr8.2:5774066-5774085 | MS.gene070273:intron | 25.0% |
| ! | TCGAAAAAGATTCATAAAAG+AGG | + | chr8.2:5771911-5771930 | MS.gene070273:CDS | 25.0% |
| ! | TTCTGATATATACAAACTAC+AGG | + | chr8.2:5774364-5774383 | MS.gene070273:intron | 25.0% |
| ! | TTTACATAAACAGTAAAACC+AGG | - | chr8.2:5772830-5772849 | None:intergenic | 25.0% |
| !! | ACGTTTTTAATATGAAGTGT+CGG | - | chr8.2:5773961-5773980 | None:intergenic | 25.0% |
| !! | AGAAGGTTATATACCTATTT+TGG | + | chr8.2:5774131-5774150 | MS.gene070273:intron | 25.0% |
| !! | CTTTGAAAGTGAATTATTTG+AGG | + | chr8.2:5772162-5772181 | MS.gene070273:CDS | 25.0% |
| !! | TATCGATTGCAATTTCTTTA+TGG | - | chr8.2:5772784-5772803 | None:intergenic | 25.0% |
| !! | TGAAGATGTTGATAAACATA+AGG | + | chr8.2:5772631-5772650 | MS.gene070273:CDS | 25.0% |
| !!! | ACAATGAACTTGTTAAACAA+TGG | + | chr8.2:5774994-5775013 | MS.gene070273:CDS | 25.0% |
| !!! | ATCAATTTTGGTTCTTTCTT+CGG | - | chr8.2:5772582-5772601 | None:intergenic | 25.0% |
| !!! | CAATGAACTTGTTAAACAAT+GGG | + | chr8.2:5774995-5775014 | MS.gene070273:CDS | 25.0% |
| !!! | TCTTGTTTCTGATTTTTACA+TGG | + | chr8.2:5774227-5774246 | MS.gene070273:intron | 25.0% |
| AAAAACCATCCATACCATAT+TGG | - | chr8.2:5772271-5772290 | None:intergenic | 30.0% | |
| AAATAGTCCAACGATGTAAA+AGG | - | chr8.2:5772407-5772426 | None:intergenic | 30.0% | |
| AAATATGGCTGAAGTGATAA+AGG | + | chr8.2:5772862-5772881 | MS.gene070273:CDS | 30.0% | |
| AGATTCTGCACAAAATACAA+CGG | + | chr8.2:5774827-5774846 | MS.gene070273:CDS | 30.0% | |
| AGTGTGTTAGAAATTTGAAG+GGG | - | chr8.2:5773887-5773906 | None:intergenic | 30.0% | |
| ATATCAGACTCGAAAATCAA+TGG | + | chr8.2:5772704-5772723 | MS.gene070273:CDS | 30.0% | |
| ATCCAATGTGAATATGGAAA+TGG | + | chr8.2:5774854-5774873 | MS.gene070273:CDS | 30.0% | |
| ATCTGACACATATTGGAATT+TGG | + | chr8.2:5773988-5774007 | MS.gene070273:intron | 30.0% | |
| ATTAGACAGGTTATATGCAT+GGG | + | chr8.2:5773368-5773387 | MS.gene070273:CDS | 30.0% | |
| ATTATTATACCTTGACTTCC+TGG | - | chr8.2:5773407-5773426 | None:intergenic | 30.0% | |
| CAGTGTGTTAGAAATTTGAA+GGG | - | chr8.2:5773888-5773907 | None:intergenic | 30.0% | |
| CATATTAACTTAGATGCATC+GGG | - | chr8.2:5774654-5774673 | None:intergenic | 30.0% | |
| CATCCATAACAATATGTTCA+AGG | - | chr8.2:5772451-5772470 | None:intergenic | 30.0% | |
| GATTTATACTCATCAGTTAG+AGG | - | chr8.2:5773442-5773461 | None:intergenic | 30.0% | |
| GCATATTAACTTAGATGCAT+CGG | - | chr8.2:5774655-5774674 | None:intergenic | 30.0% | |
| GTATCAAAATCTCAATCTTC+AGG | + | chr8.2:5772743-5772762 | MS.gene070273:CDS | 30.0% | |
| TTACTGTTTATGTAAACCGA+AGG | + | chr8.2:5772834-5772853 | MS.gene070273:CDS | 30.0% | |
| TTTACATCGTTGGACTATTT+CGG | + | chr8.2:5772407-5772426 | MS.gene070273:CDS | 30.0% | |
| ! | AGATGTTGATAAACATAAGG+AGG | + | chr8.2:5772634-5772653 | MS.gene070273:CDS | 30.0% |
| ! | GTATCTATTTGTGAGTTTTC+AGG | + | chr8.2:5773175-5773194 | MS.gene070273:intron | 30.0% |
| ! | TAGCCTTGAACATATTGTTA+TGG | + | chr8.2:5772445-5772464 | MS.gene070273:CDS | 30.0% |
| ! | TGATATTTTCTGCACAGTTT+CGG | - | chr8.2:5772690-5772709 | None:intergenic | 30.0% |
| !! | CACTATATTGGCTTGTAATT+AGG | + | chr8.2:5774320-5774339 | MS.gene070273:intron | 30.0% |
| !!! | TATGGTATGGATGGTTTTTT+TGG | + | chr8.2:5772272-5772291 | MS.gene070273:CDS | 30.0% |
| AAAATTGACGCATTCATAGG+CGG | - | chr8.2:5772308-5772327 | None:intergenic | 35.0% | |
| AAACCTGAAAGTTCGTTAGA+AGG | - | chr8.2:5772974-5772993 | None:intergenic | 35.0% | |
| AACCTGAAAGTTCGTTAGAA+GGG | - | chr8.2:5772973-5772992 | None:intergenic | 35.0% | |
| AAGAATGTGCAGTTTCGTTT+AGG | - | chr8.2:5774185-5774204 | None:intergenic | 35.0% | |
| AAGTTCATTGTATCCCTTAG+CGG | - | chr8.2:5774985-5775004 | None:intergenic | 35.0% | |
| AATCGATACTGAAGAAGCTA+AGG | + | chr8.2:5772796-5772815 | MS.gene070273:CDS | 35.0% | |
| AGTTTATGATGATCCATCAG+AGG | + | chr8.2:5773311-5773330 | MS.gene070273:CDS | 35.0% | |
| ATAACCTGTCTAATGTTGAC+TGG | - | chr8.2:5773362-5773381 | None:intergenic | 35.0% | |
| ATCTCAATCTTCAGGTCATA+TGG | + | chr8.2:5772751-5772770 | MS.gene070273:CDS | 35.0% | |
| ATGTTTGCTTCTGTGTTTGA+TGG | - | chr8.2:5774422-5774441 | None:intergenic | 35.0% | |
| CAAAAGTTCTGCACCAAAAT+AGG | - | chr8.2:5774147-5774166 | None:intergenic | 35.0% | |
| CAAGAACTTTGATGTTCGTT+TGG | + | chr8.2:5773099-5773118 | MS.gene070273:intron | 35.0% | |
| CAATGTGAATATGGAAATGG+TGG | + | chr8.2:5774857-5774876 | MS.gene070273:CDS | 35.0% | |
| CACCATTTCCATATTCACAT+TGG | - | chr8.2:5774859-5774878 | None:intergenic | 35.0% | |
| CAGTTTCGTTTAGGTAAGAA+GGG | - | chr8.2:5774176-5774195 | None:intergenic | 35.0% | |
| CATAGAACTCAGTTTGCAAA+TGG | + | chr8.2:5771942-5771961 | MS.gene070273:CDS | 35.0% | |
| CATTAGACAGGTTATATGCA+TGG | + | chr8.2:5773367-5773386 | MS.gene070273:CDS | 35.0% | |
| CGATGTAAAAGGATTCCAAA+AGG | - | chr8.2:5772396-5772415 | None:intergenic | 35.0% | |
| CTGAGGAACCATGATATAAA+AGG | + | chr8.2:5773669-5773688 | MS.gene070273:CDS | 35.0% | |
| CTTGAGTATCTGACACATAT+TGG | + | chr8.2:5773981-5774000 | MS.gene070273:intron | 35.0% | |
| GAAATGGATGATGAACAAGA+AGG | + | chr8.2:5772533-5772552 | MS.gene070273:CDS | 35.0% | |
| GAACCATGATATAAAAGGAG+AGG | + | chr8.2:5773674-5773693 | MS.gene070273:CDS | 35.0% | |
| GCAAAAATTGACGCATTCAT+AGG | - | chr8.2:5772311-5772330 | None:intergenic | 35.0% | |
| GCAGTGTGTTAGAAATTTGA+AGG | - | chr8.2:5773889-5773908 | None:intergenic | 35.0% | |
| GCTACATTGAGTGATGATAT+GGG | - | chr8.2:5773937-5773956 | None:intergenic | 35.0% | |
| TAAGGTTGGAGAAGAAGTTA+TGG | + | chr8.2:5774887-5774906 | MS.gene070273:CDS | 35.0% | |
| TATTCTCCAGTGTACCAATA+TGG | + | chr8.2:5772254-5772273 | MS.gene070273:CDS | 35.0% | |
| TCAAACACAGAAGCAAACAT+TGG | + | chr8.2:5774422-5774441 | MS.gene070273:CDS | 35.0% | |
| TCTCCAACAACAATTGAGTT+TGG | + | chr8.2:5772125-5772144 | MS.gene070273:CDS | 35.0% | |
| TCTTAACTGTTGTGCATAGA+AGG | - | chr8.2:5774805-5774824 | None:intergenic | 35.0% | |
| TGCTACATTGAGTGATGATA+TGG | - | chr8.2:5773938-5773957 | None:intergenic | 35.0% | |
| TTCAACCATGACTTCTTCTT+TGG | - | chr8.2:5772615-5772634 | None:intergenic | 35.0% | |
| TTCCTGACTGTTGAAAAAGA+AGG | - | chr8.2:5773611-5773630 | None:intergenic | 35.0% | |
| ! | GGAGGAGTTTACATCAATTT+TGG | - | chr8.2:5772594-5772613 | None:intergenic | 35.0% |
| ! | GTTCCTCTCCTTTTATATCA+TGG | - | chr8.2:5773680-5773699 | None:intergenic | 35.0% |
| ! | TTGGAATCCTTTTACATCGT+TGG | + | chr8.2:5772397-5772416 | MS.gene070273:CDS | 35.0% |
| !! | GGATAAGTATTGAGCTTTCT+TGG | - | chr8.2:5772951-5772970 | None:intergenic | 35.0% |
| !! | TAACCTTCTAGGGTACTTTA+TGG | - | chr8.2:5774120-5774139 | None:intergenic | 35.0% |
| !! | TTCTAACGAACTTTCAGGTT+TGG | + | chr8.2:5772973-5772992 | MS.gene070273:intron | 35.0% |
| !!! | GATTTTTTCGCAGCTGAATT+AGG | + | chr8.2:5774777-5774796 | MS.gene070273:CDS | 35.0% |
| AAATTGACGCATTCATAGGC+GGG | - | chr8.2:5772307-5772326 | None:intergenic | 40.0% | |
| AACACACAATGTTCCTCTGA+TGG | - | chr8.2:5773327-5773346 | None:intergenic | 40.0% | |
| AACCATGACTTCTTCTTTGG+AGG | - | chr8.2:5772612-5772631 | None:intergenic | 40.0% | |
| AAGGAGGAAGAGAAAGAGAA+GGG | + | chr8.2:5772650-5772669 | MS.gene070273:CDS | 40.0% | |
| ACCTGAAAGTTCGTTAGAAG+GGG | - | chr8.2:5772972-5772991 | None:intergenic | 40.0% | |
| AGAAGAAATGTCTGCAACTG+AGG | + | chr8.2:5773652-5773671 | MS.gene070273:CDS | 40.0% | |
| AGATACGAGTGAACGCAAAA+TGG | - | chr8.2:5773161-5773180 | None:intergenic | 40.0% | |
| AGATGCCTTACAAGAAACAG+CGG | + | chr8.2:5774740-5774759 | MS.gene070273:CDS | 40.0% | |
| AGCAAAGATGTGGAAAGTGA+TGG | + | chr8.2:5774389-5774408 | MS.gene070273:CDS | 40.0% | |
| AGCTTCTTGAATTGCTGCAA+GGG | + | chr8.2:5773826-5773845 | MS.gene070273:CDS | 40.0% | |
| AGTTAATATGCTCTCCTCGA+AGG | + | chr8.2:5774664-5774683 | MS.gene070273:CDS | 40.0% | |
| ATCACTTCAGCCATATTTGC+CGG | - | chr8.2:5772860-5772879 | None:intergenic | 40.0% | |
| CAATTCGGTTTCAAGATTGG+AGG | - | chr8.2:5774535-5774554 | None:intergenic | 40.0% | |
| CAGGAGAATTGAAACCTTGA+GGG | + | chr8.2:5773785-5773804 | MS.gene070273:CDS | 40.0% | |
| CCAATCTTGAAACCGAATTG+AGG | + | chr8.2:5774535-5774554 | MS.gene070273:CDS | 40.0% | |
| CCTCAATTCGGTTTCAAGAT+TGG | - | chr8.2:5774538-5774557 | None:intergenic | 40.0% | |
| GAAGCCAAGATTCTTATAGC+CGG | + | chr8.2:5774447-5774466 | MS.gene070273:CDS | 40.0% | |
| GAAGTTGCAGCAAAATTGTG+AGG | + | chr8.2:5775025-5775044 | MS.gene070273:CDS | 40.0% | |
| GACTATTTCGGTTACCCTAA+TGG | + | chr8.2:5772419-5772438 | MS.gene070273:CDS | 40.0% | |
| GCAGTTTCGTTTAGGTAAGA+AGG | - | chr8.2:5774177-5774196 | None:intergenic | 40.0% | |
| GGTCCAAACTCAATTGTTGT+TGG | - | chr8.2:5772131-5772150 | None:intergenic | 40.0% | |
| GGTTGGATCCAATGTGAATA+TGG | + | chr8.2:5774848-5774867 | MS.gene070273:CDS | 40.0% | |
| GTGTACCAATATGGTATGGA+TGG | + | chr8.2:5772263-5772282 | MS.gene070273:CDS | 40.0% | |
| GTTCAAGGCTACTTCCATTA+GGG | - | chr8.2:5772436-5772455 | None:intergenic | 40.0% | |
| TAACAATGCCGAGACATCAT+TGG | - | chr8.2:5772924-5772943 | None:intergenic | 40.0% | |
| TAAGGAGGAAGAGAAAGAGA+AGG | + | chr8.2:5772649-5772668 | MS.gene070273:CDS | 40.0% | |
| TCAGACTCGAAAATCAATGG+CGG | + | chr8.2:5772707-5772726 | MS.gene070273:CDS | 40.0% | |
| TCCAGTGTACCAATATGGTA+TGG | + | chr8.2:5772259-5772278 | MS.gene070273:CDS | 40.0% | |
| TCCATACCATATTGGTACAC+TGG | - | chr8.2:5772263-5772282 | None:intergenic | 40.0% | |
| TCTGCACAAAATACAACGGT+TGG | + | chr8.2:5774831-5774850 | MS.gene070273:CDS | 40.0% | |
| TGAACACAAAGGCCAAACAA+CGG | - | chr8.2:5774705-5774724 | None:intergenic | 40.0% | |
| TGTCTCAACTCGAACCATTT+CGG | - | chr8.2:5772234-5772253 | None:intergenic | 40.0% | |
| TGTTCAAGGCTACTTCCATT+AGG | - | chr8.2:5772437-5772456 | None:intergenic | 40.0% | |
| TGTTTATGTAAACCGAAGGC+CGG | + | chr8.2:5772838-5772857 | MS.gene070273:CDS | 40.0% | |
| TTCACCTCAGTCTTCTCAAT+GGG | + | chr8.2:5772367-5772386 | MS.gene070273:CDS | 40.0% | |
| TTCGATATCGAAATGACTGC+AGG | - | chr8.2:5772095-5772114 | None:intergenic | 40.0% | |
| TTGAAACCGAATTGAGGAAC+TGG | + | chr8.2:5774541-5774560 | MS.gene070273:CDS | 40.0% | |
| TTGCAGCAATTCAAGAAGCT+GGG | - | chr8.2:5773826-5773845 | None:intergenic | 40.0% | |
| TTGCTTATTCTCCGAATGAC+AGG | + | chr8.2:5772327-5772346 | MS.gene070273:CDS | 40.0% | |
| ! | AATGCCGGCTATAAGAATCT+TGG | - | chr8.2:5774454-5774473 | None:intergenic | 40.0% |
| ! | ACTCAGTTGAAGCTATTTCC+AGG | + | chr8.2:5773766-5773785 | MS.gene070273:CDS | 40.0% |
| ! | AGTTATGGAGGTTGCTGTTA+AGG | + | chr8.2:5774902-5774921 | MS.gene070273:CDS | 40.0% |
| ! | CAATTGTTGAAGTTGGTCTC+TGG | - | chr8.2:5773476-5773495 | None:intergenic | 40.0% |
| ! | CTTCTCAATGGGATTCCTTT+TGG | + | chr8.2:5772378-5772397 | MS.gene070273:CDS | 40.0% |
| ! | GTGAATTATTTGAGGCCAAG+TGG | + | chr8.2:5772170-5772189 | MS.gene070273:CDS | 40.0% |
| ! | TGTCCATAAAGTACCCTAGA+AGG | + | chr8.2:5774114-5774133 | MS.gene070273:intron | 40.0% |
| !! | TAACGAACTTTCAGGTTTGG+TGG | + | chr8.2:5772976-5772995 | MS.gene070273:intron | 40.0% |
| !! | TTTGCTATTGACTCCGCTAA+GGG | + | chr8.2:5774969-5774988 | MS.gene070273:CDS | 40.0% |
| !!! | CACCTTCTTTTTCAACAGTC+AGG | + | chr8.2:5773606-5773625 | MS.gene070273:intron | 40.0% |
| !!! | CTTGTTTTATCCACAGACGA+AGG | - | chr8.2:5773702-5773721 | None:intergenic | 40.0% |
| AACAGTCAGGAACACGTGTT+CGG | + | chr8.2:5773619-5773638 | MS.gene070273:intron | 45.0% | |
| AATTGACGCATTCATAGGCG+GGG | - | chr8.2:5772306-5772325 | None:intergenic | 45.0% | |
| ACTACAGGCTAGCAAAGATG+TGG | + | chr8.2:5774379-5774398 | MS.gene070273:intron | 45.0% | |
| AGACCTGGAACAGGAAGAAA+TGG | + | chr8.2:5772517-5772536 | MS.gene070273:CDS | 45.0% | |
| AGGAAGGTTCGAGAAGAAGA+AGG | + | chr8.2:5772488-5772507 | MS.gene070273:CDS | 45.0% | |
| ATTTCTTCCTGTTCCAGGTC+TGG | - | chr8.2:5772518-5772537 | None:intergenic | 45.0% | |
| CAATGCAGCCAATGATGTCT+CGG | + | chr8.2:5772913-5772932 | MS.gene070273:CDS | 45.0% | |
| CAGCTTCTTGAATTGCTGCA+AGG | + | chr8.2:5773825-5773844 | MS.gene070273:CDS | 45.0% | |
| CATCCATTTCTTCCTGTTCC+AGG | - | chr8.2:5772523-5772542 | None:intergenic | 45.0% | |
| CCAGGAGAATTGAAACCTTG+AGG | + | chr8.2:5773784-5773803 | MS.gene070273:CDS | 45.0% | |
| CCTCAAGGTTTCAATTCTCC+TGG | - | chr8.2:5773787-5773806 | None:intergenic | 45.0% | |
| CGTCGATAACTGATCCATAC+AGG | + | chr8.2:5774496-5774515 | MS.gene070273:CDS | 45.0% | |
| CTCCTCCAAAGAAGAAGTCA+TGG | + | chr8.2:5772607-5772626 | MS.gene070273:CDS | 45.0% | |
| CTTCACCTCAGTCTTCTCAA+TGG | + | chr8.2:5772366-5772385 | MS.gene070273:CDS | 45.0% | |
| CTTGCAGCAATTCAAGAAGC+TGG | - | chr8.2:5773827-5773846 | None:intergenic | 45.0% | |
| GAACACAAAGGCCAAACAAC+GGG | - | chr8.2:5774704-5774723 | None:intergenic | 45.0% | |
| GAAGCTAAGGAAGAAACACC+TGG | + | chr8.2:5772809-5772828 | MS.gene070273:CDS | 45.0% | |
| GAATCCCATTGAGAAGACTG+AGG | - | chr8.2:5772374-5772393 | None:intergenic | 45.0% | |
| GGAAGGTTCGAGAAGAAGAA+GGG | + | chr8.2:5772489-5772508 | MS.gene070273:CDS | 45.0% | |
| GGTTGGAGAAGAAGTTATGG+AGG | + | chr8.2:5774890-5774909 | MS.gene070273:CDS | 45.0% | |
| GTCAAGTGCTATGAGCTCAA+TGG | + | chr8.2:5774941-5774960 | MS.gene070273:CDS | 45.0% | |
| GTCACCAGTCAACATTAGAC+AGG | + | chr8.2:5773355-5773374 | MS.gene070273:CDS | 45.0% | |
| GTCTCAACTCGAACCATTTC+GGG | - | chr8.2:5772233-5772252 | None:intergenic | 45.0% | |
| GTTATGGATGATGAGAACCG+AGG | + | chr8.2:5772461-5772480 | MS.gene070273:CDS | 45.0% | |
| GTTTCGCCAGTTCCTCAATT+CGG | - | chr8.2:5774550-5774569 | None:intergenic | 45.0% | |
| TCCCCTTCTAACGAACTTTC+AGG | + | chr8.2:5772968-5772987 | MS.gene070273:CDS | 45.0% | |
| TCCTACATTCACGCACTAAC+TGG | + | chr8.2:5774600-5774619 | MS.gene070273:CDS | 45.0% | |
| TGATGTCTCGGCATTGTTAG+AGG | + | chr8.2:5772925-5772944 | MS.gene070273:CDS | 45.0% | |
| TTGAGAAGACTGAGGTGAAG+CGG | - | chr8.2:5772366-5772385 | None:intergenic | 45.0% | |
| ! | ATGGTGGAAGTTGCTAAGGT+TGG | + | chr8.2:5774873-5774892 | MS.gene070273:CDS | 45.0% |
| ! | CGACGTAGAAGACTGTTTTC+TGG | - | chr8.2:5774481-5774500 | None:intergenic | 45.0% |
| ! | GGAAATGGTGGAAGTTGCTA+AGG | + | chr8.2:5774869-5774888 | MS.gene070273:CDS | 45.0% |
| ! | GTTGCTGTTAAGGTACTCTG+TGG | + | chr8.2:5774912-5774931 | MS.gene070273:CDS | 45.0% |
| ! | TGTTTGGCCTTTGTGTTCAG+TGG | + | chr8.2:5774706-5774725 | MS.gene070273:CDS | 45.0% |
| !! | AAGCACCGCTGTTTCTTGTA+AGG | - | chr8.2:5774748-5774767 | None:intergenic | 45.0% |
| !! | CTGTTTTCTGGCATCAATGC+CGG | - | chr8.2:5774469-5774488 | None:intergenic | 45.0% |
| !! | GAAATCGGTGGATTACCACT+TGG | - | chr8.2:5772188-5772207 | None:intergenic | 45.0% |
| !! | GGCGAAACACTTTTGAGTCA+TGG | + | chr8.2:5774562-5774581 | MS.gene070273:CDS | 45.0% |
| !! | GTTTGCTATTGACTCCGCTA+AGG | + | chr8.2:5774968-5774987 | MS.gene070273:CDS | 45.0% |
| !! | TAATCCACCGATTTCAGTCG+AGG | + | chr8.2:5772193-5772212 | MS.gene070273:CDS | 45.0% |
| AAACCGAAGGCCGGCAAATA+TGG | + | chr8.2:5772847-5772866 | MS.gene070273:CDS | 50.0% | |
| ACATTCACGCACTAACTGGC+TGG | + | chr8.2:5774604-5774623 | MS.gene070273:CDS | 50.0% | |
| AGAAGAAGGGATACCAGACC+TGG | + | chr8.2:5772502-5772521 | MS.gene070273:CDS | 50.0% | |
| AGCTCTACTCACCCGTTGTT+TGG | + | chr8.2:5774690-5774709 | MS.gene070273:CDS | 50.0% | |
| ATGATGAGAACCGAGGACTG+AGG | + | chr8.2:5772468-5772487 | MS.gene070273:CDS | 50.0% | |
| ATGGGAGAAGAAGCTCTACC+AGG | + | chr8.2:5773386-5773405 | MS.gene070273:CDS | 50.0% | |
| CTTTCCTCGACTGAAATCGG+TGG | - | chr8.2:5772200-5772219 | None:intergenic | 50.0% | |
| GAAGCTCTACCAGGAAGTCA+AGG | + | chr8.2:5773395-5773414 | MS.gene070273:CDS | 50.0% | |
| GACGAGCGAAAAAGAGCTAC+TGG | - | chr8.2:5773249-5773268 | None:intergenic | 50.0% | |
| GCCAGTTAGTGCGTGAATGT+AGG | - | chr8.2:5774604-5774623 | None:intergenic | 50.0% | |
| GCCTTGACCACTGAACACAA+AGG | - | chr8.2:5774716-5774735 | None:intergenic | 50.0% | |
| GCCTTTGTGTTCAGTGGTCA+AGG | + | chr8.2:5774712-5774731 | MS.gene070273:CDS | 50.0% | |
| GGCCTTTCCTCGACTGAAAT+CGG | - | chr8.2:5772203-5772222 | None:intergenic | 50.0% | |
| GGGATAACAGGCCTGTCATT+CGG | - | chr8.2:5772341-5772360 | None:intergenic | 50.0% | |
| GTGCAACTCTTCATCCCTCA+AGG | - | chr8.2:5773802-5773821 | None:intergenic | 50.0% | |
| TGAGAAGACTGAGGTGAAGC+GGG | - | chr8.2:5772365-5772384 | None:intergenic | 50.0% | |
| TGAGTAGAGCTAGACCTTCG+AGG | - | chr8.2:5774681-5774700 | None:intergenic | 50.0% | |
| ! | ACTCGAACCATTTCGGGTGA+CGG | - | chr8.2:5772227-5772246 | None:intergenic | 50.0% |
| ! | GCTGTTAAGGTACTCTGTGG+TGG | + | chr8.2:5774915-5774934 | MS.gene070273:CDS | 50.0% |
| !! | CACCGATTTCAGTCGAGGAA+AGG | + | chr8.2:5772198-5772217 | MS.gene070273:CDS | 50.0% |
| !! | CTAGCTTTGTTCTTCGCAGG+TGG | - | chr8.2:5772071-5772090 | None:intergenic | 50.0% |
| !! | GGACTAGCTTTGTTCTTCGC+AGG | - | chr8.2:5772074-5772093 | None:intergenic | 50.0% |
| AAGACTGAGGTGAAGCGGGA+GGG | - | chr8.2:5772361-5772380 | None:intergenic | 55.0% | |
| AGGAGAGGAACCTTCGTCTG+TGG | + | chr8.2:5773689-5773708 | MS.gene070273:CDS | 55.0% | |
| AGGGATACCAGACCTGGAAC+AGG | + | chr8.2:5772508-5772527 | MS.gene070273:CDS | 55.0% | |
| CAGCCATATTTGCCGGCCTT+CGG | - | chr8.2:5772853-5772872 | None:intergenic | 55.0% | |
| CTCGAACCTTCCTCAGTCCT+CGG | - | chr8.2:5772481-5772500 | None:intergenic | 55.0% | |
| TGAGAACCGAGGACTGAGGA+AGG | + | chr8.2:5772472-5772491 | MS.gene070273:CDS | 55.0% | |
| AAGGCCTCCGTCACCCGAAA+TGG | + | chr8.2:5772217-5772236 | MS.gene070273:CDS | 60.0% | |
| GAAGACTGAGGTGAAGCGGG+AGG | - | chr8.2:5772362-5772381 | None:intergenic | 60.0% | |
| GGTGAAGCGGGAGGGATAAC+AGG | - | chr8.2:5772353-5772372 | None:intergenic | 60.0% | |
| ! | CGAACCATTTCGGGTGACGG+AGG | - | chr8.2:5772224-5772243 | None:intergenic | 60.0% |
| GCTGAGCGTGCGAGCCTGTA+TGG | - | chr8.2:5774513-5774532 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 5771855 | 5775058 | 5771855 | ID=MS.gene070273 |
| chr8.2 | mRNA | 5771855 | 5775058 | 5771855 | ID=MS.gene070273.t1;Parent=MS.gene070273 |
| chr8.2 | exon | 5771855 | 5772989 | 5771855 | ID=MS.gene070273.t1.exon1;Parent=MS.gene070273.t1 |
| chr8.2 | CDS | 5771855 | 5772989 | 5771855 | ID=cds.MS.gene070273.t1;Parent=MS.gene070273.t1 |
| chr8.2 | exon | 5773229 | 5773416 | 5773229 | ID=MS.gene070273.t1.exon2;Parent=MS.gene070273.t1 |
| chr8.2 | CDS | 5773229 | 5773416 | 5773229 | ID=cds.MS.gene070273.t1;Parent=MS.gene070273.t1 |
| chr8.2 | exon | 5773624 | 5773847 | 5773624 | ID=MS.gene070273.t1.exon3;Parent=MS.gene070273.t1 |
| chr8.2 | CDS | 5773624 | 5773847 | 5773624 | ID=cds.MS.gene070273.t1;Parent=MS.gene070273.t1 |
| chr8.2 | exon | 5774386 | 5775058 | 5774386 | ID=MS.gene070273.t1.exon4;Parent=MS.gene070273.t1 |
| chr8.2 | CDS | 5774386 | 5775058 | 5774386 | ID=cds.MS.gene070273.t1;Parent=MS.gene070273.t1 |
| Gene Sequence |
| Protein sequence |
