AlfalfaGEDB | MS.gene072365

M. sativa cultivar XinJiangDaYe / MS.gene072365

KEGG: -
GO: GO:0003674 GO:0005488 GO:0005515 GO:0046983
PFAM: PF00010.29

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene072365.t1	XP_003625199.1	90.3	321	22	3	1	314	1	319	4.90E-151	543.9

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene072365.t1	Q66GR3	43.6	282	133	7	42	314	91	355	9.1e-37	155.6

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene072365.t1	G7KUF7	90.3	321	22	3	1	314	1	319	3.6e-151	543.9

TFs/TRs:

Gene ID	Type	Classification
MS.gene072365.t1	TF	bHLH

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049259	MS.gene072365	0.803333	3.66E-49	-1.69E-46
MS.gene050082	MS.gene072365	0.8026	5.20E-49	-1.69E-46
MS.gene051127	MS.gene072365	0.810419	1.16E-50	-1.69E-46
MS.gene051138	MS.gene072365	0.812571	3.96E-51	-1.69E-46
MS.gene051364	MS.gene072365	0.813037	3.13E-51	-1.69E-46
MS.gene051366	MS.gene072365	0.819434	1.16E-52	-1.69E-46
MS.gene051367	MS.gene072365	0.819627	1.05E-52	-1.69E-46
MS.gene051410	MS.gene072365	0.818655	1.75E-52	-1.69E-46
MS.gene051651	MS.gene072365	0.807676	4.50E-50	-1.69E-46
MS.gene053420	MS.gene072365	0.823297	1.49E-53	-1.69E-46
MS.gene055202	MS.gene072365	0.821445	4.02E-53	-1.69E-46
MS.gene055942	MS.gene072365	0.805906	1.06E-49	-1.69E-46
MS.gene056856	MS.gene072365	0.821355	4.22E-53	-1.69E-46
MS.gene057768	MS.gene072365	0.835097	2.05E-56	-1.69E-46
MS.gene058109	MS.gene072365	0.820356	7.16E-53	-1.69E-46
MS.gene058111	MS.gene072365	0.856313	3.50E-62	-1.69E-46
MS.gene058171	MS.gene072365	0.850776	1.36E-60	-1.69E-46
MS.gene058173	MS.gene072365	0.84863	5.42E-60	-1.69E-46
MS.gene058175	MS.gene072365	0.858336	8.84E-63	-1.69E-46
MS.gene059865	MS.gene072365	-0.802751	4.84E-49	-1.69E-46
MS.gene060595	MS.gene072365	0.805353	1.39E-49	-1.69E-46
MS.gene060823	MS.gene072365	0.808316	3.29E-50	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene072365.t1	MTR_7g092540	90.343	321	22	3	1	314	1	319	0.0	587
MS.gene072365.t1	MTR_7g092540	89.286	308	24	3	1	301	1	306	0.0	555
MS.gene072365.t1	MTR_1g052470	47.312	372	124	10	4	310	6	370	2.89e-85	261
MS.gene072365.t1	MTR_1g052470	42.587	317	110	10	4	255	6	315	1.77e-50	170
MS.gene072365.t1	MTR_4g065870	38.697	261	131	3	80	314	174	431	3.17e-49	169
MS.gene072365.t1	MTR_2g098310	42.164	268	104	9	82	314	157	408	5.54e-49	168
MS.gene072365.t1	MTR_2g098310	42.578	256	96	9	82	302	157	396	4.30e-45	158
MS.gene072365.t1	MTR_6g052280	84.706	85	13	0	197	281	13	97	2.75e-43	145
MS.gene072365.t1	MTR_4g065870	38.618	246	122	4	80	299	174	416	1.92e-42	151
MS.gene072365.t1	MTR_2g098310	36.964	303	105	10	82	314	157	443	7.34e-42	150
MS.gene072365.t1	MTR_3g028520	38.723	235	127	4	87	310	166	394	1.15e-40	146
MS.gene072365.t1	MTR_3g027650	38.723	235	127	4	87	310	166	394	1.15e-40	146
MS.gene072365.t1	MTR_3g027650	39.111	225	120	4	87	300	166	384	9.47e-37	136
MS.gene072365.t1	MTR_8g036235	35.099	302	140	5	49	310	103	388	2.69e-34	129
MS.gene072365.t1	MTR_4g033295	69.620	79	24	0	232	310	112	190	2.34e-33	122
MS.gene072365.t1	MTR_2g098310	39.316	234	91	9	82	280	157	374	6.51e-32	123
MS.gene072365.t1	MTR_1g116790	51.220	123	57	2	193	314	221	341	1.85e-30	118
MS.gene072365.t1	MTR_4g033295	74.286	70	18	0	232	301	112	181	8.24e-30	112
MS.gene072365.t1	MTR_4g065870	34.529	223	117	4	80	276	174	393	4.74e-29	115
MS.gene072365.t1	MTR_3g027650	35.323	201	113	4	87	276	166	360	2.34e-23	99.0
MS.gene072365.t1	MTR_4g033295	84.444	45	7	0	232	276	112	156	1.22e-19	85.1
MS.gene072365.t1	MTR_2g098310	35.407	209	84	9	82	255	157	349	8.11e-18	83.2
MS.gene072365.t1	MTR_8g036235	31.047	277	135	5	49	285	103	363	1.78e-17	82.8
MS.gene072365.t1	MTR_1g017350	52.113	71	34	0	238	308	260	330	6.60e-16	78.2
MS.gene072365.t1	MTR_1g017350	52.113	71	34	0	238	308	260	330	6.67e-16	78.2
MS.gene072365.t1	MTR_1g017350	52.113	71	34	0	238	308	260	330	7.18e-16	78.2
MS.gene072365.t1	MTR_1g017350	52.113	71	34	0	238	308	260	330	7.46e-16	78.2
MS.gene072365.t1	MTR_4g131160	54.412	68	30	1	238	305	196	262	8.66e-16	77.8
MS.gene072365.t1	MTR_4g131160	54.412	68	30	1	238	305	199	265	8.78e-16	77.8
MS.gene072365.t1	MTR_1g080890	50.667	75	36	1	231	305	186	259	2.06e-15	76.3
MS.gene072365.t1	MTR_5g048860	50.000	74	37	0	238	311	365	438	3.82e-15	76.3
MS.gene072365.t1	MTR_3g498825	53.731	67	31	0	238	304	147	213	5.33e-15	74.7
MS.gene072365.t1	MTR_7g053410	48.649	74	38	0	238	311	317	390	9.03e-15	75.1
MS.gene072365.t1	MTR_7g053410	48.649	74	38	0	238	311	317	390	1.14e-14	74.7
MS.gene072365.t1	MTR_3g116770	50.000	74	37	0	238	311	191	264	1.99e-14	73.6
MS.gene072365.t1	MTR_3g116770	50.000	74	37	0	238	311	191	264	2.01e-14	73.6
MS.gene072365.t1	MTR_8g065740	50.725	69	34	0	238	306	305	373	3.77e-14	73.2
MS.gene072365.t1	MTR_8g012290	45.946	74	40	0	238	311	291	364	4.64e-14	72.8
MS.gene072365.t1	MTR_8g012290	45.946	74	40	0	238	311	291	364	4.74e-14	72.8
MS.gene072365.t1	MTR_8g099880	49.275	69	35	0	238	306	145	213	1.54e-13	70.5
MS.gene072365.t1	MTR_4g070320	45.679	81	42	1	231	311	138	216	1.72e-13	70.5
MS.gene072365.t1	MTR_8g062240	47.761	67	35	0	238	304	151	217	1.04e-12	67.8
MS.gene072365.t1	MTR_7g092510	41.892	74	43	0	238	311	173	246	1.71e-11	64.7
MS.gene072365.t1	MTR_5g037250	46.269	67	36	0	238	304	112	178	1.77e-11	63.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene072365.t1	AT2G42280	48.133	241	106	6	83	314	125	355	5.31e-48	164
MS.gene072365.t1	AT2G42280	48.458	227	98	6	83	300	125	341	1.01e-41	148
MS.gene072365.t1	AT1G51140	57.143	119	44	3	192	310	265	376	3.38e-38	139
MS.gene072365.t1	AT2G43140	58.095	105	43	1	207	310	102	206	1.81e-35	127
MS.gene072365.t1	AT2G43140	58.095	105	43	1	207	310	199	303	6.72e-35	129
MS.gene072365.t1	AT1G35460	61.176	85	33	0	230	314	173	257	3.44e-32	120
MS.gene072365.t1	AT1G05805	57.692	104	42	2	208	310	253	355	2.13e-31	120
MS.gene072365.t1	AT4G09180	59.341	91	35	1	224	314	172	260	5.06e-30	115
MS.gene072365.t1	AT1G35460	76.596	47	11	0	230	276	173	219	4.71e-18	82.0
MS.gene072365.t1	AT2G24260	51.282	78	37	1	228	305	25	101	3.21e-16	77.0
MS.gene072365.t1	AT5G58010	54.412	68	30	1	238	305	99	165	6.66e-16	77.0
MS.gene072365.t1	AT2G24260	51.282	78	37	1	228	305	128	204	7.68e-16	77.4
MS.gene072365.t1	AT4G30980	54.412	68	30	1	238	305	130	196	2.45e-15	75.5
MS.gene072365.t1	AT4G30980	54.412	68	30	1	238	305	178	244	3.31e-15	75.9
MS.gene072365.t1	AT1G10120	53.623	69	32	0	238	306	206	274	5.67e-15	75.1
MS.gene072365.t1	AT1G10120	53.623	69	32	0	238	306	206	274	5.67e-15	75.1
MS.gene072365.t1	AT4G34530	48.649	74	38	0	238	311	172	245	8.17e-15	74.3
MS.gene072365.t1	AT5G50915	53.731	67	31	0	238	304	136	202	1.23e-14	73.2
MS.gene072365.t1	AT5G50915	53.731	67	31	0	238	304	136	202	1.23e-14	73.2
MS.gene072365.t1	AT1G68920	49.296	71	36	0	238	308	302	372	1.43e-14	74.3
MS.gene072365.t1	AT1G68920	49.296	71	36	0	238	308	303	373	1.47e-14	74.3
MS.gene072365.t1	AT1G68920	49.296	71	36	0	238	308	303	373	1.47e-14	74.3
MS.gene072365.t1	AT1G68920	49.296	71	36	0	238	308	303	373	1.47e-14	74.3
MS.gene072365.t1	AT5G50915	53.731	67	31	0	238	304	136	202	1.49e-14	72.8
MS.gene072365.t1	AT5G50915	53.731	67	31	0	238	304	136	202	1.49e-14	72.8
MS.gene072365.t1	AT2G42280	40.110	182	90	6	83	255	125	296	2.78e-14	72.4
MS.gene072365.t1	AT3G07340	47.297	74	39	0	238	311	258	331	4.64e-14	72.8
MS.gene072365.t1	AT3G07340	47.297	74	39	0	238	311	258	331	4.96e-14	72.8
MS.gene072365.t1	AT1G26260	52.239	67	32	0	238	304	223	289	6.08e-14	72.4
MS.gene072365.t1	AT1G26260	52.239	67	32	0	238	304	223	289	6.08e-14	72.4
MS.gene072365.t1	AT1G26260	52.239	67	32	0	238	304	223	289	6.08e-14	72.4
MS.gene072365.t1	AT1G26260	52.239	67	32	0	238	304	223	289	6.08e-14	72.4
MS.gene072365.t1	AT1G26260	52.239	67	32	0	238	304	201	267	6.26e-14	72.0
MS.gene072365.t1	AT1G26260	52.239	67	32	0	238	304	172	238	6.61e-14	71.6
MS.gene072365.t1	AT1G25330	47.761	67	35	0	238	304	104	170	1.04e-13	69.7
MS.gene072365.t1	AT5G48560	49.254	67	34	0	238	304	301	367	3.54e-13	70.1
MS.gene072365.t1	AT5G48560	49.254	67	34	0	238	304	301	367	3.83e-13	70.1
MS.gene072365.t1	AT3G23690	45.946	74	40	0	238	311	191	264	4.60e-13	69.3
MS.gene072365.t1	AT4G36540	44.156	77	41	1	228	304	133	207	6.90e-13	68.6
MS.gene072365.t1	AT4G36540	44.156	77	41	1	228	304	133	207	7.53e-13	68.2
MS.gene072365.t1	AT1G18400	47.761	67	35	0	238	304	145	211	2.01e-12	66.2
MS.gene072365.t1	AT1G18400	47.761	67	35	0	238	304	145	211	3.21e-12	65.9
MS.gene072365.t1	AT1G59640	47.761	67	35	0	238	304	136	202	3.48e-12	65.9
MS.gene072365.t1	AT2G18300	46.377	69	37	0	238	306	185	253	3.68e-12	66.6
MS.gene072365.t1	AT2G18300	46.377	69	37	0	238	306	185	253	3.77e-12	66.6
MS.gene072365.t1	AT2G42300	43.243	74	42	0	238	311	185	258	3.99e-12	66.2
MS.gene072365.t1	AT3G57800	43.243	74	42	0	238	311	204	277	4.26e-12	66.6
MS.gene072365.t1	AT1G73830	44.776	67	37	0	238	304	147	213	4.71e-12	65.5
MS.gene072365.t1	AT2G18300	46.377	69	37	0	238	306	185	253	4.84e-12	66.2
MS.gene072365.t1	AT1G73830	44.776	67	37	0	238	304	147	213	5.13e-12	65.5
MS.gene072365.t1	AT2G42300	43.243	74	42	0	238	311	185	258	6.80e-12	65.1
MS.gene072365.t1	AT1G59640	47.761	67	35	0	238	304	136	202	1.22e-11	65.1
MS.gene072365.t1	AT5G62610	44.776	67	37	0	238	304	153	219	2.90e-11	63.5
MS.gene072365.t1	AT5G62610	44.776	67	37	0	238	304	153	219	2.90e-11	63.5

Find 58 sgRNAs with CRISPR-Local

Find 107 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AAACGAAGCAACCTTGAATT+TGG	0.214893	7.4:+16151858	None:intergenic
TTGTCACCTTTATGATTAAA+AGG	0.243027	7.4:+16151747	None:intergenic
CTCAAGGAAGAAGGACTTCT+TGG	0.270896	7.4:+16150690	None:intergenic
CTTTATGATTAAAAGGATTA+TGG	0.272914	7.4:+16151754	None:intergenic
ATCTACCTTTAGAGAATTCA+TGG	0.283481	7.4:-16151778	MS.gene072365:CDS
AACATATTGAACAATCAAAT+TGG	0.290694	7.4:-16150720	MS.gene072365:CDS
ACCCTTTCGGCAAGGCTTCT+AGG	0.305032	7.4:+16150293	None:intergenic
CCGAGTTCTTCTTACCCTTT+CGG	0.326997	7.4:+16150280	None:intergenic
ATGCTGCTCGGAACAGAATC+TGG	0.330247	7.4:+16150344	None:intergenic
AATGTTTATTGTGGAGAATT+TGG	0.338878	7.4:-16150375	MS.gene072365:CDS
AATGAGGATGCTCAATATTA+TGG	0.342968	7.4:-16150588	MS.gene072365:CDS
ATTCTGACCTTATCAATGTT+TGG	0.345820	7.4:+16150221	None:intergenic
GAAGGTTGTGCTACAAATTC+TGG	0.353997	7.4:-16151813	MS.gene072365:CDS
AACAACAACATCATCTCCTT+TGG	0.393746	7.4:-16151597	MS.gene072365:CDS
TCCTAGAAGCCTTGCCGAAA+GGG	0.399735	7.4:-16150294	MS.gene072365:CDS
AACATCATCTCCTTTGGAAA+TGG	0.414195	7.4:-16151591	MS.gene072365:intron
CTCTTTGCTCTGATGCTGCT+CGG	0.438402	7.4:+16150332	None:intergenic
ACCACTCTGTCTTAAAAGAT+TGG	0.442108	7.4:+16151641	None:intergenic
AACAAAACCAACCAAATTCA+AGG	0.457834	7.4:-16151869	MS.gene072365:CDS
AAAGGAGATGATGTTGTTGT+TGG	0.459546	7.4:+16151599	None:intergenic
TCGGAACAGAATCTGGAAAC+TGG	0.461159	7.4:+16150351	None:intergenic
CATTTATGATTCTAATGACC+AGG	0.461256	7.4:-16150556	MS.gene072365:intron
GGTTGTTCCAAACATTGATA+AGG	0.462084	7.4:-16150228	MS.gene072365:intron
AGACAGAGTGGTTCCCATGC+TGG	0.479729	7.4:-16151630	MS.gene072365:CDS
AAAGGTGTTGAAAACTATGA+TGG	0.487777	7.4:-16150780	MS.gene072365:CDS
CACATCAGAAATGTTAGACT+TGG	0.499859	7.4:-16150102	MS.gene072365:CDS
AAGACACATGAATTCTCAGC+AGG	0.502231	7.4:-16151697	MS.gene072365:CDS
TTCTCAGCAGGGTTATAGAA+TGG	0.503073	7.4:-16151685	MS.gene072365:CDS
ATCATCAGAAATGTTTATTG+TGG	0.507405	7.4:-16150384	MS.gene072365:CDS
TTGATGTTACTCAGAACGTA+GGG	0.512000	7.4:-16150457	MS.gene072365:intron
GAAGCAACCTTGAATTTGGT+TGG	0.517186	7.4:+16151862	None:intergenic
GATAACATTCTCAAGGAAGA+AGG	0.538937	7.4:+16150681	None:intergenic
ATCCTAGAAGCCTTGCCGAA+AGG	0.543719	7.4:-16150295	MS.gene072365:CDS
ATGGTCCATGAATTCTCTAA+AGG	0.546307	7.4:+16151773	None:intergenic
AACTCTAAAACGAGGAGTGA+TGG	0.547308	7.4:-16150654	MS.gene072365:CDS
TTCTTCTTACCCTTTCGGCA+AGG	0.550067	7.4:+16150285	None:intergenic
TCAAGTTTCAAACAAGCTGA+AGG	0.555684	7.4:-16151831	MS.gene072365:CDS
CCGAAAGGGTAAGAAGAACT+CGG	0.565752	7.4:-16150280	MS.gene072365:CDS
CTCCTTGTCTTCGATCATCA+CGG	0.577461	7.4:+16150616	None:intergenic
AAAACGAGGAGTGATGGCAT+TGG	0.578334	7.4:-16150648	MS.gene072365:CDS
GCAGGGTATGAATCTATGAA+AGG	0.606763	7.4:-16150798	MS.gene072365:intron
TTTGATGTTACTCAGAACGT+AGG	0.607876	7.4:-16150458	MS.gene072365:intron
AAGGTGTTGAAAACTATGAT+GGG	0.612325	7.4:-16150779	MS.gene072365:CDS
GTTATGTGATAACATTCTCA+AGG	0.612399	7.4:+16150674	None:intergenic
TACTACAATACCATTTCCAA+AGG	0.613692	7.4:+16151581	None:intergenic
AGCAGCATCAGAGCAAAGAG+AGG	0.624459	7.4:-16150329	MS.gene072365:CDS
ACGAATGAGAAAATTGCAAG+AGG	0.630200	7.4:-16150249	MS.gene072365:CDS
TATAGAATGGATCAACACAA+AGG	0.657311	7.4:-16151672	MS.gene072365:CDS
AGCCGTGATGATCGAAGACA+AGG	0.662100	7.4:-16150618	MS.gene072365:CDS
GTTGGAGAAATGACCAGCAT+GGG	0.675608	7.4:+16151617	None:intergenic
TGTTGGAGAAATGACCAGCA+TGG	0.677077	7.4:+16151616	None:intergenic
CGTGATGATCGAAGACAAGG+AGG	0.691311	7.4:-16150615	MS.gene072365:CDS
AGACACATGAATTCTCAGCA+GGG	0.696388	7.4:-16151696	MS.gene072365:CDS
GATGGGGTGAATGACAGTGA+TGG	0.701721	7.4:-16150762	MS.gene072365:CDS
TGATGTTACTCAGAACGTAG+GGG	0.704763	7.4:-16150456	MS.gene072365:intron
AAGACAAGGAGGTAGCAATG+AGG	0.720936	7.4:-16150604	MS.gene072365:CDS
AGGTGTTGAAAACTATGATG+GGG	0.756832	7.4:-16150778	MS.gene072365:CDS
TATCACATAACTCTAAAACG+AGG	0.781502	7.4:-16150662	MS.gene072365:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	ATTAAAACATAACTTTTTTT+AGG	-	chr7.4:16150523-16150542	MS.gene072365:intron	10.0%
!!	AAAAAAGTTATTTATGTACA+AGG	-	chr7.4:16150764-16150783	MS.gene072365:CDS	15.0%
!!	AAAAACATAATTGTCTTAAA+AGG	+	chr7.4:16151638-16151657	None:intergenic	15.0%
!!	AAAAAGTTATTTATGTACAA+GGG	-	chr7.4:16150765-16150784	MS.gene072365:CDS	15.0%
!!	AAAACATAATTGTCTTAAAA+GGG	+	chr7.4:16151637-16151656	None:intergenic	15.0%
!!	ATTAAAATATATATTAGTGC+AGG	+	chr7.4:16151843-16151862	None:intergenic	15.0%
!!	GCTAAATCTAAAAAAAAAAT+GGG	-	chr7.4:16150557-16150576	MS.gene072365:CDS	15.0%
!!	TGCTAAATCTAAAAAAAAAA+TGG	-	chr7.4:16150556-16150575	MS.gene072365:intron	15.0%
!!	TTATCATTAAGAATAGAATT+CGG	-	chr7.4:16150598-16150617	MS.gene072365:CDS	15.0%
!!!	AGTTAAACATTGTTTAATTT+TGG	-	chr7.4:16151668-16151687	MS.gene072365:CDS	15.0%
!!	AAACATAATTGTCTTAAAAG+GGG	+	chr7.4:16151636-16151655	None:intergenic	20.0%
!!	AACAATTTCTGTCTAATTTA+TGG	-	chr7.4:16150818-16150837	MS.gene072365:intron	20.0%
!!	AACATATTGAACAATCAAAT+TGG	-	chr7.4:16151084-16151103	MS.gene072365:intron	20.0%
!!	AGATCTTCAAAAACAATTAA+AGG	-	chr7.4:16151741-16151760	MS.gene072365:CDS	20.0%
!!	CTTTATGATTAAAAGGATTA+TGG	+	chr7.4:16150053-16150072	None:intergenic	20.0%
!!!	ATTCTATTTTAAGAAAGTGT+AGG	+	chr7.4:16150356-16150375	None:intergenic	20.0%
!!!	ATTTAGTGTTAAATGACTTT+TGG	-	chr7.4:16150498-16150517	MS.gene072365:intron	20.0%
!!!	CATAATCCTTTTAATCATAA+AGG	-	chr7.4:16150051-16150070	MS.gene072365:intron	20.0%
!!!	TTCTATTTTAAGAAAGTGTA+GGG	+	chr7.4:16150355-16150374	None:intergenic	20.0%
!	AACATAATTGTCTTAAAAGG+GGG	+	chr7.4:16151635-16151654	None:intergenic	25.0%
!	AATGTTTATTGTGGAGAATT+TGG	-	chr7.4:16151429-16151448	MS.gene072365:intron	25.0%
!	ACTAAAATTGTATCTTGTGT+TGG	+	chr7.4:16150458-16150477	None:intergenic	25.0%
!	ATCATCAGAAATGTTTATTG+TGG	-	chr7.4:16151420-16151439	MS.gene072365:intron	25.0%
!	GCATATAAATGTAAATTGCA+GGG	-	chr7.4:16150989-16151008	MS.gene072365:intron	25.0%
!	TGCATATAAATGTAAATTGC+AGG	-	chr7.4:16150988-16151007	MS.gene072365:intron	25.0%
!	TGTATTTCATTGTAGTTACA+TGG	-	chr7.4:16150685-16150704	MS.gene072365:CDS	25.0%
!	TTGTCACCTTTATGATTAAA+AGG	+	chr7.4:16150060-16150079	None:intergenic	25.0%
!!	AACATTTCTGATGATTTTCT+TGG	+	chr7.4:16151415-16151434	None:intergenic	25.0%
!!	TTTCTTCTAGACAACTTTTT+AGG	-	chr7.4:16150301-16150320	MS.gene072365:CDS	25.0%
!!!	GCAATTTTTTGTGAATATAG+TGG	-	chr7.4:16150416-16150435	MS.gene072365:CDS	25.0%
	AACAAAACCAACCAAATTCA+AGG	-	chr7.4:16149935-16149954	MS.gene072365:intron	30.0%
	AAGTTAACCTGTTATATACC+TGG	+	chr7.4:16151269-16151288	None:intergenic	30.0%
	AAGTTATTTATGTACAAGGG+AGG	-	chr7.4:16150768-16150787	MS.gene072365:CDS	30.0%
	AATGAGGATGCTCAATATTA+TGG	-	chr7.4:16151216-16151235	MS.gene072365:intron	30.0%
	AATTGCGAATCAGCAAAATT+AGG	+	chr7.4:16151327-16151346	None:intergenic	30.0%
	ACTAATCATGATTAACTGCA+TGG	+	chr7.4:16151815-16151834	None:intergenic	30.0%
	ATTCTGACCTTATCAATGTT+TGG	+	chr7.4:16151586-16151605	None:intergenic	30.0%
	CATTTATGATTCTAATGACC+AGG	-	chr7.4:16151248-16151267	MS.gene072365:intron	30.0%
	CTAATGTGATTCATATTGCT+AGG	+	chr7.4:16150942-16150961	None:intergenic	30.0%
	GATTCAAATCATGAGATAGT+AGG	-	chr7.4:16150857-16150876	MS.gene072365:intron	30.0%
	GTTATGTGATAACATTCTCA+AGG	+	chr7.4:16151133-16151152	None:intergenic	30.0%
	TAACTGCATGGAAATGAATA+GGG	+	chr7.4:16151803-16151822	None:intergenic	30.0%
	TACTACAATACCATTTCCAA+AGG	+	chr7.4:16150226-16150245	None:intergenic	30.0%
	TAGGAGACAAAATTGCATTT+AGG	+	chr7.4:16151308-16151327	None:intergenic	30.0%
	TATAGAATGGATCAACACAA+AGG	-	chr7.4:16150132-16150151	MS.gene072365:intron	30.0%
	TTAACTGCATGGAAATGAAT+AGG	+	chr7.4:16151804-16151823	None:intergenic	30.0%
!	ATCTACCTTTAGAGAATTCA+TGG	-	chr7.4:16150026-16150045	MS.gene072365:intron	30.0%
!	CTAGTTCAATGTTTCTTTTG+GGG	-	chr7.4:16150324-16150343	MS.gene072365:CDS	30.0%
!	GCTAGTTCAATGTTTCTTTT+GGG	-	chr7.4:16150323-16150342	MS.gene072365:CDS	30.0%
!	TAGTTCAATGTTTCTTTTGG+GGG	-	chr7.4:16150325-16150344	MS.gene072365:CDS	30.0%
!!	AAAGGTGTTGAAAACTATGA+TGG	-	chr7.4:16151024-16151043	MS.gene072365:intron	30.0%
!!	AAGGTGTTGAAAACTATGAT+GGG	-	chr7.4:16151025-16151044	MS.gene072365:intron	30.0%
!!	TATCACATAACTCTAAAACG+AGG	-	chr7.4:16151142-16151161	MS.gene072365:intron	30.0%
!!!	TTGAATTTGGTTGGTTTTGT+TGG	+	chr7.4:16149936-16149955	None:intergenic	30.0%
	AAACGAAGCAACCTTGAATT+TGG	+	chr7.4:16149949-16149968	None:intergenic	35.0%
	AAAGGAGATGATGTTGTTGT+TGG	+	chr7.4:16150208-16150227	None:intergenic	35.0%
	AAATGCTAAACAAGCATAGG+TGG	-	chr7.4:16150892-16150911	MS.gene072365:intron	35.0%
	AACAACAACATCATCTCCTT+TGG	-	chr7.4:16150207-16150226	MS.gene072365:intron	35.0%
	AACTGCATGGAAATGAATAG+GGG	+	chr7.4:16151802-16151821	None:intergenic	35.0%
	ACCACTCTGTCTTAAAAGAT+TGG	+	chr7.4:16150166-16150185	None:intergenic	35.0%
	ACGAATGAGAAAATTGCAAG+AGG	-	chr7.4:16151555-16151574	MS.gene072365:intron	35.0%
	ATGGTCCATGAATTCTCTAA+AGG	+	chr7.4:16150034-16150053	None:intergenic	35.0%
	CACAAATGCTAAACAAGCAT+AGG	-	chr7.4:16150889-16150908	MS.gene072365:intron	35.0%
	CACATCAGAAATGTTAGACT+TGG	-	chr7.4:16151702-16151721	MS.gene072365:CDS	35.0%
	CTAATGACCAGGTATATAAC+AGG	-	chr7.4:16151259-16151278	MS.gene072365:intron	35.0%
	CTAATTCTAACGCTATTCGT+TGG	+	chr7.4:16150659-16150678	None:intergenic	35.0%
	CTATGCTTGTTTAGCATTTG+TGG	+	chr7.4:16150891-16150910	None:intergenic	35.0%
	GATAACATTCTCAAGGAAGA+AGG	+	chr7.4:16151126-16151145	None:intergenic	35.0%
	GGTTGTTCCAAACATTGATA+AGG	-	chr7.4:16151576-16151595	MS.gene072365:intron	35.0%
	TCAAGTTTCAAACAAGCTGA+AGG	-	chr7.4:16149973-16149992	MS.gene072365:intron	35.0%
	TTGATGTTACTCAGAACGTA+GGG	-	chr7.4:16151347-16151366	MS.gene072365:intron	35.0%
	TTTGATGTTACTCAGAACGT+AGG	-	chr7.4:16151346-16151365	MS.gene072365:intron	35.0%
!	AACATCATCTCCTTTGGAAA+TGG	-	chr7.4:16150213-16150232	MS.gene072365:intron	35.0%
!!	AGGTGTTGAAAACTATGATG+GGG	-	chr7.4:16151026-16151045	MS.gene072365:intron	35.0%
!!	GGCTAGTTCAATGTTTCTTT+TGG	-	chr7.4:16150322-16150341	MS.gene072365:CDS	35.0%
!!!	ACCAATCTTTTAAGACAGAG+TGG	-	chr7.4:16150162-16150181	MS.gene072365:intron	35.0%
	AAGACACATGAATTCTCAGC+AGG	-	chr7.4:16150107-16150126	MS.gene072365:CDS	40.0%
	AGACACATGAATTCTCAGCA+GGG	-	chr7.4:16150108-16150127	MS.gene072365:CDS	40.0%
	GAAGCAACCTTGAATTTGGT+TGG	+	chr7.4:16149945-16149964	None:intergenic	40.0%
	GAAGGTTGTGCTACAAATTC+TGG	-	chr7.4:16149991-16150010	MS.gene072365:intron	40.0%
	GCAGGGTATGAATCTATGAA+AGG	-	chr7.4:16151006-16151025	MS.gene072365:intron	40.0%
	GTGAATATAGTGGTCAGCTA+AGG	-	chr7.4:16150426-16150445	MS.gene072365:CDS	40.0%
	TATAGTGGTCAGCTAAGGTT+TGG	-	chr7.4:16150431-16150450	MS.gene072365:CDS	40.0%
	TGATGTTACTCAGAACGTAG+GGG	-	chr7.4:16151348-16151367	MS.gene072365:intron	40.0%
	TTCTCAGCAGGGTTATAGAA+TGG	-	chr7.4:16150119-16150138	MS.gene072365:intron	40.0%
!!	AACTCTAAAACGAGGAGTGA+TGG	-	chr7.4:16151150-16151169	MS.gene072365:intron	40.0%
	AAAACGAGGAGTGATGGCAT+TGG	-	chr7.4:16151156-16151175	MS.gene072365:intron	45.0%
	AAGACAAGGAGGTAGCAATG+AGG	-	chr7.4:16151200-16151219	MS.gene072365:intron	45.0%
	CCGAAAGGGTAAGAAGAACT+CGG	-	chr7.4:16151524-16151543	MS.gene072365:intron	45.0%
	CCGAGTTCTTCTTACCCTTT+CGG	+	chr7.4:16151527-16151546	None:intergenic	45.0%
	CTCAAGGAAGAAGGACTTCT+TGG	+	chr7.4:16151117-16151136	None:intergenic	45.0%
	CTCCTTGTCTTCGATCATCA+CGG	+	chr7.4:16151191-16151210	None:intergenic	45.0%
	GTTGGAGAAATGACCAGCAT+GGG	+	chr7.4:16150190-16150209	None:intergenic	45.0%
	TCGGAACAGAATCTGGAAAC+TGG	+	chr7.4:16151456-16151475	None:intergenic	45.0%
	TGTTGGAGAAATGACCAGCA+TGG	+	chr7.4:16150191-16150210	None:intergenic	45.0%
	TTCTTCTTACCCTTTCGGCA+AGG	+	chr7.4:16151522-16151541	None:intergenic	45.0%
!!!	TTAACTTTTTTTTTTTTATT+AGG	-	chr7.4:16151282-16151301	MS.gene072365:intron	5.0%
	AGCAGCATCAGAGCAAAGAG+AGG	-	chr7.4:16151475-16151494	MS.gene072365:intron	50.0%
	AGCCGTGATGATCGAAGACA+AGG	-	chr7.4:16151186-16151205	MS.gene072365:intron	50.0%
	ATCCTAGAAGCCTTGCCGAA+AGG	-	chr7.4:16151509-16151528	MS.gene072365:intron	50.0%
	ATGCTGCTCGGAACAGAATC+TGG	+	chr7.4:16151463-16151482	None:intergenic	50.0%
	CGTGATGATCGAAGACAAGG+AGG	-	chr7.4:16151189-16151208	MS.gene072365:intron	50.0%
	CTCTTTGCTCTGATGCTGCT+CGG	+	chr7.4:16151475-16151494	None:intergenic	50.0%
	GATGGGGTGAATGACAGTGA+TGG	-	chr7.4:16151042-16151061	MS.gene072365:intron	50.0%
	TCCTAGAAGCCTTGCCGAAA+GGG	-	chr7.4:16151510-16151529	MS.gene072365:intron	50.0%
	ACCCTTTCGGCAAGGCTTCT+AGG	+	chr7.4:16151514-16151533	None:intergenic	55.0%
	AGACAGAGTGGTTCCCATGC+TGG	-	chr7.4:16150174-16150193	MS.gene072365:intron	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr7.4	gene	16149904	16151922	16149904	ID=MS.gene072365
chr7.4	mRNA	16149904	16151922	16149904	ID=MS.gene072365.t1;Parent=MS.gene072365
chr7.4	exon	16151592	16151922	16151592	ID=MS.gene072365.t1.exon1;Parent=MS.gene072365.t1
chr7.4	CDS	16151592	16151922	16151592	ID=cds.MS.gene072365.t1;Parent=MS.gene072365.t1
chr7.4	exon	16150557	16150816	16150557	ID=MS.gene072365.t1.exon2;Parent=MS.gene072365.t1
chr7.4	CDS	16150557	16150816	16150557	ID=cds.MS.gene072365.t1;Parent=MS.gene072365.t1
chr7.4	exon	16150229	16150465	16150229	ID=MS.gene072365.t1.exon3;Parent=MS.gene072365.t1
chr7.4	CDS	16150229	16150465	16150229	ID=cds.MS.gene072365.t1;Parent=MS.gene072365.t1
chr7.4	exon	16150064	16150132	16150064	ID=MS.gene072365.t1.exon4;Parent=MS.gene072365.t1
chr7.4	CDS	16150064	16150132	16150064	ID=cds.MS.gene072365.t1;Parent=MS.gene072365.t1
chr7.4	exon	16149904	16149951	16149904	ID=MS.gene072365.t1.exon5;Parent=MS.gene072365.t1
chr7.4	CDS	16149904	16149951	16149904	ID=cds.MS.gene072365.t1;Parent=MS.gene072365.t1

Gene Sequence

>MS.gene072365

ATGGATTTGAATTCTCATTATCAACAACTCCAACAAAACCAACCAAATTCAAGGTTGCTTCGTTTTCGTTCAAGTTTCAAACAAGCTGAAGGTTGTGCTACAAATTCTGGTGAAACTTCTTCATCTACCTTTAGAGAATTCATGGACCATAATCCTTTTAATCATAAAGGTGACAACAACAACAACGAGTCTTCATTATCTCAAAGACACATGAATTCTCAGCAGGGTTATAGAATGGATCAACACAAAGGTTTTTATACCAATCTTTTAAGACAGAGTGGTTCCCATGCTGGTCATTTCTCCAACAACAACATCATCTCCTTTGGAAATGGTATTGTAGTACTTTTTCTATTTCTGTTTTTTGTCTTGATTTTGACTTTTTTGTTCAATGATTTAATTTCTTCTAGACAACTTTTTAGGCTAGTTCAATGTTTCTTTTGGGGGCTGTCCCTACACTTTCTTAAAATAGAATTTGAAATTATAATTAATATTTTGTGCTCAAGAAATAGAGTGCAATTTTTTGTGAATATAGTGGTCAGCTAAGGTTTGGTCCAACACAAGATACAATTTTAGTCATCGTAGAGAGACATTTGCATTTAGTGTTAAATGACTTTTGGAAATTAAAACATAACTTTTTTTAGGACAGACATGTTGCTAAATCTAAAAAAAAAATGGGAGCTAAATCAATTTTTTTTTATCATTAAGAATAGAATTCGGAATTTTGAGTTTACAACACTCACACATACTATGCACCAACGAATAGCGTTAGAATTAGATAGATTGTATTTCATTGTAGTTACATGGATATTCAACATAAATATATAACGTATACATAAGTTATTTATGTGTGTAACAAAAAAAAAAAAGTTATTTATGTACAAGGGAGGCATTTATGTCTAATTATTATTTTTTTTAACAATTTCTGTCTAATTTATGGTTGTTTATAATTTGCTGATTCAAATCATGAGATAGTAGGACTTAATTCCACAAATGCTAAACAAGCATAGGTGGATTCATTCTCTGAAGATTTATTTACCTAGCAATATGAATCACATTAGATTTTCACATTTTTAAACATTATTTATGCATATAAATGTAAATTGCAGGGTATGAATCTATGAAAGGTGTTGAAAACTATGATGGGGTGAATGACAGTGATGGTGAACTTACTCTATCTATGAACATATTGAACAATCAAATTGGCTTCTCACCAAGAAGTCCTTCTTCCTTGAGAATGTTATCACATAACTCTAAAACGAGGAGTGATGGCATTGGAACAACTAGCCGTGATGATCGAAGACAAGGAGGTAGCAATGAGGATGCTCAATATTATGGTCATAAATTCATTTATGATTCTAATGACCAGGTATATAACAGGTTAACTTTTTTTTTTTTATTAGGCCTAAATGCAATTTTGTCTCCTAATTTTGCTGATTCGCAATTTTGATGTTACTCAGAACGTAGGGGTACGAAATCAAGTTGATACACTATCACATCAGTTGAGTTTGCCAAGAAAATCATCAGAAATGTTTATTGTGGAGAATTTGGTCCAGTTTCCAGATTCTGTTCCGAGCAGCATCAGAGCAAAGAGAGGCTTTGCAACACATCCTAGAAGCCTTGCCGAAAGGGTAAGAAGAACTCGGATAAGTGAACGAATGAGAAAATTGCAAGAGGTTGTTCCAAACATTGATAAGGTCAGAATCATCATCACACAGTTGTTGATTTTTTCCCCCTTTTAAGACAATTATGTTTTTGTGTTTAGAAAGTTAAACATTGTTTAATTTTGGCAGCAAACTTGCACATCAGAAATGTTAGACTTGGCTGTAGAGTACATTAAAGATCTTCAAAAACAATTAAAGGTACTTAATTAAATTTATAAGTTAGTTAATTTTATTCCCCTATTCATTTCCATGCAGTTAATCATGATTAGTTCATGCCTGCACTAATATATATTTTAATTACTTTATGCAGACTATGAGTGCAAAAAGAGCTAAGTGCAGATGCAGAAACAAGAAATGA

Protein sequence

>MS.gene072365.t1

MDLNSHYQQLQQNQPNSRLLRFRSSFKQAEGCATNSGETSSSTFREFMDHNPFNHKGDNNNNESSLSQRHMNSQQGYRMDQHKGFYTNLLRQSGSHAGHFSNNNIISFGNGYESMKGVENYDGVNDSDGELTLSMNILNNQIGFSPRSPSSLRMLSHNSKTRSDGIGTTSRDDRRQGGSNEDAQYYGHKFIYDSNDQNVGVRNQVDTLSHQLSLPRKSSEMFIVENLVQFPDSVPSSIRAKRGFATHPRSLAERVRRTRISERMRKLQEVVPNIDKQTCTSEMLDLAVEYIKDLQKQLKTMSAKRAKCRCRNKK