AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene08797

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene08797.t1 MTR_8g085300 98.178 439 5 1 1 436 1 439 0.0 894
MS.gene08797.t1 MTR_3g083840 71.101 436 118 2 1 436 1 428 0.0 638
MS.gene08797.t1 MTR_4g114580 53.039 362 149 3 90 440 110 461 1.91e-129 388
MS.gene08797.t1 MTR_8g085290 99.408 169 1 0 437 605 2 170 1.01e-117 347
MS.gene08797.t1 MTR_4g068180 25.946 370 205 8 71 427 116 429 9.16e-27 114
MS.gene08797.t1 MTR_2g099380 26.316 342 183 8 96 424 134 419 1.71e-24 107
MS.gene08797.t1 MTR_1g069705 29.054 296 162 10 106 387 68 329 4.52e-24 105
MS.gene08797.t1 MTR_4g115090 27.160 324 168 11 99 417 351 611 2.72e-21 98.6
MS.gene08797.t1 MTR_4g081110 27.682 289 176 9 104 379 54 322 1.27e-19 92.4
MS.gene08797.t1 MTR_2g083220 26.712 292 178 8 104 379 55 326 1.71e-17 85.9
MS.gene08797.t1 MTR_2g099380 26.923 260 118 8 96 340 134 336 6.06e-15 77.0
MS.gene08797.t1 MTR_2g099185 30.380 158 87 5 223 378 373 509 1.98e-14 76.6
MS.gene08797.t1 MTR_2g099185 30.380 158 87 5 223 378 378 514 2.13e-14 76.6
MS.gene08797.t1 MTR_2g099185 30.189 159 88 5 223 379 373 510 2.47e-14 76.6
MS.gene08797.t1 MTR_6g016590 29.268 205 122 8 220 421 129 313 2.33e-12 69.3
MS.gene08797.t1 MTR_1g007590 25.405 185 101 6 248 412 292 459 2.56e-12 69.7
MS.gene08797.t1 MTR_1g007590 25.405 185 101 6 248 412 387 554 3.75e-12 69.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene08797.t1 AT4G13730 67.453 424 108 4 39 436 28 447 0.0 598
MS.gene08797.t1 AT1G04830 63.087 447 150 3 1 436 1 443 0.0 586
MS.gene08797.t1 AT4G13730 66.038 424 103 5 39 436 28 436 0.0 578
MS.gene08797.t1 AT1G04830 62.557 438 149 3 1 427 1 434 0.0 570
MS.gene08797.t1 AT4G13730 65.067 375 101 4 39 387 28 398 1.32e-176 506
MS.gene08797.t1 AT1G04830 56.376 447 137 4 1 436 1 400 6.48e-171 492
MS.gene08797.t1 AT4G14147 92.857 168 12 0 438 605 2 169 1.86e-109 326
MS.gene08797.t1 AT4G14147 92.857 168 12 0 438 605 2 169 1.86e-109 326
MS.gene08797.t1 AT4G14147 80.000 175 27 2 438 605 2 175 2.53e-91 279
MS.gene08797.t1 AT2G30710 27.616 344 180 8 96 426 126 413 1.20e-26 113
MS.gene08797.t1 AT4G28550 28.620 297 182 9 101 394 57 326 8.29e-25 106
MS.gene08797.t1 AT4G28550 29.181 281 169 9 101 378 57 310 2.89e-24 104
MS.gene08797.t1 AT4G28550 29.078 282 170 9 101 379 57 311 8.70e-24 104
MS.gene08797.t1 AT2G20440 27.083 288 168 10 101 379 57 311 3.84e-23 101
MS.gene08797.t1 AT2G20440 27.083 288 168 10 101 379 57 311 1.23e-22 101
MS.gene08797.t1 AT2G20440 27.083 288 168 10 101 379 57 311 1.23e-22 101
MS.gene08797.t1 AT2G20440 30.588 170 100 4 217 386 51 202 3.12e-18 86.3
MS.gene08797.t1 AT4G27100 27.986 293 165 10 104 379 54 317 2.81e-17 85.1
MS.gene08797.t1 AT4G27100 27.986 293 165 10 104 379 54 317 2.97e-17 85.1
MS.gene08797.t1 AT5G54780 31.579 171 96 5 217 384 171 323 4.67e-16 81.3
MS.gene08797.t1 AT5G52580 26.000 200 127 6 220 417 456 636 1.18e-15 80.9
MS.gene08797.t1 AT5G52580 26.000 200 127 6 220 417 439 619 1.37e-15 80.9
MS.gene08797.t1 AT5G52580 26.000 200 127 6 220 417 445 625 1.46e-15 80.9
MS.gene08797.t1 AT3G59570 27.473 182 107 7 223 400 369 529 2.88e-14 76.6
MS.gene08797.t1 AT3G59570 27.473 182 107 7 223 400 369 529 3.11e-14 76.6
MS.gene08797.t1 AT3G59570 27.473 182 107 7 223 400 369 529 3.54e-14 76.3
MS.gene08797.t1 AT3G49350 29.197 137 78 5 248 382 332 451 4.75e-13 72.4

Find 136 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGCTGACAGCCTTCATATT+TGG 0.129257 4.2:+12946915 MS.gene08797:CDS
GGAGGTTGGGGAGGTGAAAT+TGG 0.209496 4.2:-12942070 None:intergenic
CACAATGGTAATTTGTAATA+AGG 0.268352 4.2:-12951796 None:intergenic
CCAAGGGATGAATGAGTTAT+TGG 0.275612 4.2:+12944087 MS.gene08797:CDS
TGACTGTACACGAAACTTAT+TGG 0.277194 4.2:-12947592 None:intergenic
ATCCCCAATTCTATGCATTT+AGG 0.289787 4.2:+12946858 MS.gene08797:CDS
TGCTGACAGCCTTCATATTT+GGG 0.302632 4.2:+12946916 MS.gene08797:CDS
CAGGCTTTCTCCTCAGTACT+TGG 0.335499 4.2:-12950949 None:intergenic
TTCATTAAGGATAAGTCTTA+AGG 0.338456 4.2:+12949961 MS.gene08797:CDS
TCCACCTAAATGCATAGAAT+TGG 0.362457 4.2:-12946862 None:intergenic
CCACCTAAATGCATAGAATT+GGG 0.363506 4.2:-12946861 None:intergenic
CAAGGTGTGCCTGATTCTGC+TGG 0.370235 4.2:+12942368 MS.gene08797:CDS
GTGGTGGTGGTAGCCGCGGC+GGG 0.372911 4.2:-12942010 None:intergenic
AAACCTCTATCAATTCATTA+AGG 0.373068 4.2:+12949948 MS.gene08797:CDS
GATGGGAGGAGACGGAGGTT+GGG 0.375456 4.2:-12942083 None:intergenic
ACAGGATTTAGAAGGAGTTC+AGG 0.376974 4.2:-12949766 None:intergenic
ATGAGCATCCTTTGAGTCTT+GGG 0.382293 4.2:+12943227 MS.gene08797:CDS
GATTGTACCTGTGGACCCTC+TGG 0.387698 4.2:-12946956 None:intergenic
GAACGTATCCCAGCAGAATC+AGG 0.398899 4.2:-12942377 None:intergenic
GGTGGTGGTAGCCGCGGCGG+GGG 0.399551 4.2:-12942008 None:intergenic
ATGGGAGGAGACGGAGGTTG+GGG 0.399846 4.2:-12942082 None:intergenic
CCTTGGACATACTTTACTCC+TGG 0.415852 4.2:-12944070 None:intergenic
AATTGAATTCCTGAGTCAAT+AGG 0.428026 4.2:-12946892 None:intergenic
CGATGGGAGGAGACGGAGGT+TGG 0.428180 4.2:-12942084 None:intergenic
GAGAGAGCTGTTAAGCCAAT+CGG 0.429636 4.2:-12941960 None:intergenic
GATGAGCATCCTTTGAGTCT+TGG 0.430115 4.2:+12943226 MS.gene08797:CDS
GGAGGAGACGGAGGTTGGGG+AGG 0.432198 4.2:-12942079 None:intergenic
GGTGGTGGTGGTAGCCGCGG+CGG 0.442943 4.2:-12942011 None:intergenic
TATCCTTAATGAATTGATAG+AGG 0.443128 4.2:-12949951 None:intergenic
GAGCAAGGCCCTGTCACGTT+TGG 0.443402 4.2:-12943182 None:intergenic
CAACTAGACAATAGTGTTGT+GGG 0.444669 4.2:+12946210 MS.gene08797:CDS
GGATTCTTCGGTGGTGGTGG+TGG 0.445126 4.2:-12942032 None:intergenic
TCATATTGTGCAGGTGAAGC+AGG 0.446709 4.2:+12950859 MS.gene08797:intron
TAAATTACAGGATATCGATA+AGG 0.447676 4.2:+12952486 MS.gene08797:intron
TTCTTCGGTGGTGGTGGTGG+TGG 0.447749 4.2:-12942029 None:intergenic
ATGATGCCGCCAAACGTGAC+AGG 0.452162 4.2:+12943173 MS.gene08797:CDS
GAGGTTGGGGAGGTGAAATT+GGG 0.454258 4.2:-12942069 None:intergenic
TGGTGGTGGTAGCCGCGGCG+GGG 0.455632 4.2:-12942009 None:intergenic
CCAATAACTCATTCATCCCT+TGG 0.457394 4.2:-12944087 None:intergenic
TTCTGCAGGAGACTCTTCTC+CGG 0.461362 4.2:+12947451 MS.gene08797:intron
GGTGAAATTGGGCTGTGGAC+GGG 0.462866 4.2:-12942058 None:intergenic
ATCGAGTGTGTTGCGAATGC+AGG 0.464813 4.2:-12949496 None:intergenic
ATTCGCAAGCGCCTCCTAGC+GGG 0.468068 4.2:+12947498 MS.gene08797:CDS
GAGCAAATGGCTAATGTTTG+TGG 0.469058 4.2:-12947562 None:intergenic
AGGATGTACAACTCCACTAT+TGG 0.471200 4.2:+12943142 MS.gene08797:CDS
TATTGGCAACATAGAGCAAA+TGG 0.475487 4.2:-12947575 None:intergenic
CAAGGCCCTGTCACGTTTGG+CGG 0.478192 4.2:-12943179 None:intergenic
ATCATCAGCATCACCAATAG+TGG 0.481244 4.2:-12943155 None:intergenic
AGAGGATTCTTCGGTGGTGG+TGG 0.488706 4.2:-12942035 None:intergenic
TGATGGATATGCGGGAATTG+AGG 0.491397 4.2:+12942333 MS.gene08797:CDS
TTTGGTTCAGTTGTCGAAGA+AGG 0.493660 4.2:+12942310 MS.gene08797:intron
TTCCACCGGATCGAGCGCTT+TGG 0.498866 4.2:+12942657 MS.gene08797:CDS
CGATGCTGCTATGTGCCTCC+AGG 0.499023 4.2:+12949515 MS.gene08797:CDS
AGGTGAAATTGGGCTGTGGA+CGG 0.501179 4.2:-12942059 None:intergenic
ATTGGCTTAACAGCTCTCTC+TGG 0.514874 4.2:+12941963 MS.gene08797:CDS
GGGGTCTTACAGGATTTAGA+AGG 0.520233 4.2:-12949774 None:intergenic
TCTGCAGGAGACTCTTCTCC+GGG 0.520583 4.2:+12947452 MS.gene08797:intron
AGAGAGCTGTTAAGCCAATC+GGG 0.522903 4.2:-12941959 None:intergenic
GGGAGAGGATTCTTCGGTGG+TGG 0.524785 4.2:-12942038 None:intergenic
AAGGAGGCACATCGTGGTCA+TGG 0.525068 4.2:-12942162 None:intergenic
TGTATGGAATCAGTTCTTCC+AGG 0.526492 4.2:+12943258 MS.gene08797:CDS
AATTGGGCTGTGGACGGGAG+AGG 0.526572 4.2:-12942053 None:intergenic
TGCTTACTTGAGTTCAACCT+CGG 0.530297 4.2:-12949652 None:intergenic
AAAGAGTGTCCCAAATATGA+AGG 0.535343 4.2:-12946925 None:intergenic
GATGAGTGCGCTTTACATCT+CGG 0.537521 4.2:-12943855 None:intergenic
GTGGACGGGAGAGGATTCTT+CGG 0.540862 4.2:-12942044 None:intergenic
ACTGAGGAGAAAGCCTGTGC+AGG 0.541973 4.2:+12950955 MS.gene08797:CDS
CCCAATTCTATGCATTTAGG+TGG 0.542027 4.2:+12946861 MS.gene08797:CDS
GATGACCAAAGCGCTCGATC+CGG 0.543453 4.2:-12942662 None:intergenic
TCAATTATCTGCTTAGGCGG+AGG 0.544656 4.2:-12942118 None:intergenic
CCAGGAGTAAAGTATGTCCA+AGG 0.545746 4.2:+12944070 MS.gene08797:CDS
GTCTTGGGAAGACCAGTGTA+TGG 0.548559 4.2:+12943242 MS.gene08797:CDS
CCTCAGTACTTGGAAAGCCT+CGG 0.551354 4.2:-12950939 None:intergenic
AATGGCTAATGTTTGTGGAC+GGG 0.557969 4.2:-12947557 None:intergenic
ATTGTACCTGTGGACCCTCT+GGG 0.559228 4.2:-12946955 None:intergenic
AGGTGACCCAGAGGGTCCAC+AGG 0.559474 4.2:+12946949 MS.gene08797:CDS
GAAGAAGGTGATGGATATGC+GGG 0.560352 4.2:+12942325 MS.gene08797:CDS
GAATCTTCAATTATCTGCTT+AGG 0.560421 4.2:-12942124 None:intergenic
GACCAAAGCGCTCGATCCGG+TGG 0.561984 4.2:-12942659 None:intergenic
CGGAGGATCTTGAACTACGA+TGG 0.565129 4.2:-12942101 None:intergenic
CAAGAGCTATAAACCTGCAC+AGG 0.570725 4.2:-12950968 None:intergenic
ACAACTAGACAATAGTGTTG+TGG 0.571818 4.2:+12946209 MS.gene08797:CDS
TGAAGAAGAAAGTTCCCGAT+TGG 0.572438 4.2:+12941945 MS.gene08797:CDS
CTGGGATACGTTCTACATTG+TGG 0.573104 4.2:+12942387 MS.gene08797:CDS
TAAATTTGCAAAATCTAACC+AGG 0.575295 4.2:+12943906 MS.gene08797:CDS
TTTGCTTGGATATCTTCCAC+CGG 0.578588 4.2:+12942643 MS.gene08797:CDS
TCAGTTGTCGAAGAAGGTGA+TGG 0.579146 4.2:+12942316 MS.gene08797:intron
ATTTAGAAGGAGTTCAGGAC+TGG 0.580884 4.2:-12949761 None:intergenic
TATTACAAATTACCATTGTG+AGG 0.581229 4.2:+12951799 MS.gene08797:CDS
CTGGTCTTCCCAAGACTCAA+AGG 0.582046 4.2:-12943235 None:intergenic
AAATGGCTAATGTTTGTGGA+CGG 0.587156 4.2:-12947558 None:intergenic
AAGGTGTGCCTGATTCTGCT+GGG 0.588507 4.2:+12942369 MS.gene08797:CDS
TGTCTTTCAACTTCTTGACA+AGG 0.592172 4.2:-12949621 None:intergenic
GGGGAGGTGAAATTGGGCTG+TGG 0.597013 4.2:-12942063 None:intergenic
TGATGCCGCCAAACGTGACA+GGG 0.597721 4.2:+12943174 MS.gene08797:CDS
CACCTAAATGCATAGAATTG+GGG 0.597939 4.2:-12946860 None:intergenic
TGAACTACGATGGGAGGAGA+CGG 0.599786 4.2:-12942091 None:intergenic
ATCGTGGTCATGGTGATCGT+CGG 0.601526 4.2:-12942152 None:intergenic
GATCACTCTCCTATTGACTC+AGG 0.601704 4.2:+12946883 MS.gene08797:CDS
AATTTCTGATCTAGAGAGCA+AGG 0.603350 4.2:-12943197 None:intergenic
CGAAGAAGGTGATGGATATG+CGG 0.604704 4.2:+12942324 MS.gene08797:CDS
GCTTACTTGAGTTCAACCTC+GGG 0.605476 4.2:-12949651 None:intergenic
GAAAACATGATGAAGAGTTG+TGG 0.605842 4.2:+12946271 MS.gene08797:CDS
TTGAAGTGAAATCACCCGCT+AGG 0.608053 4.2:-12947512 None:intergenic
GGAGGATCTTGAACTACGAT+GGG 0.609089 4.2:-12942100 None:intergenic
GAACGCATCAGCTTCAGCAA+AGG 0.610521 4.2:-12946139 None:intergenic
ATGGTGAGAGACGTCGTAAG+CGG 0.612342 4.2:-12942185 None:intergenic
CTCAAAGGATGCTCATCATG+AGG 0.616214 4.2:-12943220 None:intergenic
CATTCGCAAGCGCCTCCTAG+CGG 0.617934 4.2:+12947497 MS.gene08797:CDS
CTAGCTAGTCAGAAATCACA+AGG 0.621456 4.2:+12943119 MS.gene08797:intron
TTAGCATTGCACAACACACC+CGG 0.621818 4.2:-12947470 None:intergenic
CATCTGAATTAGCTAAGAAG+AGG 0.622349 4.2:+12942681 MS.gene08797:CDS
GCTTCTGCATCTCCTCACAA+TGG 0.625355 4.2:-12951811 None:intergenic
TCAAAATGTCAGTGAACACA+CGG 0.627603 4.2:+12952521 MS.gene08797:CDS
TCTTCAATTATCTGCTTAGG+CGG 0.629345 4.2:-12942121 None:intergenic
TGAGAGACGTCGTAAGCGGA+AGG 0.629928 4.2:-12942181 None:intergenic
CCTCAGTCAATAATTGAGCA+TGG 0.630182 4.2:-12942204 None:intergenic
CAAAATGTCAGTGAACACAC+GGG 0.636754 4.2:+12952522 MS.gene08797:CDS
AAGTGAAATCACCCGCTAGG+AGG 0.642330 4.2:-12947509 None:intergenic
TTGAGGAGGATCTCATGTCA+AGG 0.643029 4.2:+12942350 MS.gene08797:CDS
TGGATATGCGGGAATTGAGG+AGG 0.644082 4.2:+12942336 MS.gene08797:CDS
CAGGAGTAAAGTATGTCCAA+GGG 0.651387 4.2:+12944071 MS.gene08797:CDS
GGATCTTGAACTACGATGGG+AGG 0.652054 4.2:-12942097 None:intergenic
CCGAGGCTTTCCAAGTACTG+AGG 0.654272 4.2:+12950939 MS.gene08797:CDS
GATACGTTCTACATTGTGGA+AGG 0.654463 4.2:+12942391 MS.gene08797:CDS
GACGGGAGAGGATTCTTCGG+TGG 0.655523 4.2:-12942041 None:intergenic
ACAGTACAAACAGTTCAAAG+AGG 0.670694 4.2:+12942706 MS.gene08797:CDS
CCATGCTCAATTATTGACTG+AGG 0.677781 4.2:+12942204 MS.gene08797:CDS
GAGACGTCGTAAGCGGAAGG+AGG 0.685988 4.2:-12942178 None:intergenic
ACTACGATGGGAGGAGACGG+AGG 0.699325 4.2:-12942088 None:intergenic
GAAGAACTGATTCCATACAC+TGG 0.704179 4.2:-12943254 None:intergenic
TGAAAGACATAACAAACCCG+AGG 0.704326 4.2:+12949635 MS.gene08797:CDS
AAAATGTCAGTGAACACACG+GGG 0.719917 4.2:+12952523 MS.gene08797:CDS
AAGCGGAAGGAGGCACATCG+TGG 0.724513 4.2:-12942168 None:intergenic
GCTAGTCAGAAATCACAAGG+AGG 0.771386 4.2:+12943122 MS.gene08797:intron
AAATGTCAGTGAACACACGG+GGG 0.802912 4.2:+12952524 MS.gene08797:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr4.2 gene 12941941 12952585 12941941 ID=MS.gene08797
chr4.2 mRNA 12941941 12952585 12941941 ID=MS.gene08797.t1;Parent=MS.gene08797
chr4.2 exon 12941941 12942225 12941941 ID=MS.gene08797.t1.exon1;Parent=MS.gene08797.t1
chr4.2 CDS 12941941 12942225 12941941 ID=cds.MS.gene08797.t1;Parent=MS.gene08797.t1
chr4.2 exon 12942320 12942412 12942320 ID=MS.gene08797.t1.exon2;Parent=MS.gene08797.t1
chr4.2 CDS 12942320 12942412 12942320 ID=cds.MS.gene08797.t1;Parent=MS.gene08797.t1
chr4.2 exon 12942641 12942745 12942641 ID=MS.gene08797.t1.exon3;Parent=MS.gene08797.t1
chr4.2 CDS 12942641 12942745 12942641 ID=cds.MS.gene08797.t1;Parent=MS.gene08797.t1
chr4.2 exon 12943127 12943279 12943127 ID=MS.gene08797.t1.exon4;Parent=MS.gene08797.t1
chr4.2 CDS 12943127 12943279 12943127 ID=cds.MS.gene08797.t1;Parent=MS.gene08797.t1
chr4.2 exon 12943829 12943927 12943829 ID=MS.gene08797.t1.exon5;Parent=MS.gene08797.t1
chr4.2 CDS 12943829 12943927 12943829 ID=cds.MS.gene08797.t1;Parent=MS.gene08797.t1
chr4.2 exon 12944028 12944156 12944028 ID=MS.gene08797.t1.exon6;Parent=MS.gene08797.t1
chr4.2 CDS 12944028 12944156 12944028 ID=cds.MS.gene08797.t1;Parent=MS.gene08797.t1
chr4.2 exon 12946138 12946317 12946138 ID=MS.gene08797.t1.exon7;Parent=MS.gene08797.t1
chr4.2 CDS 12946138 12946317 12946138 ID=cds.MS.gene08797.t1;Parent=MS.gene08797.t1
chr4.2 exon 12946854 12946970 12946854 ID=MS.gene08797.t1.exon8;Parent=MS.gene08797.t1
chr4.2 CDS 12946854 12946970 12946854 ID=cds.MS.gene08797.t1;Parent=MS.gene08797.t1
chr4.2 exon 12947459 12947605 12947459 ID=MS.gene08797.t1.exon9;Parent=MS.gene08797.t1
chr4.2 CDS 12947459 12947605 12947459 ID=cds.MS.gene08797.t1;Parent=MS.gene08797.t1
chr4.2 exon 12949468 12949536 12949468 ID=MS.gene08797.t1.exon10;Parent=MS.gene08797.t1
chr4.2 CDS 12949468 12949536 12949468 ID=cds.MS.gene08797.t1;Parent=MS.gene08797.t1
chr4.2 exon 12949615 12949667 12949615 ID=MS.gene08797.t1.exon11;Parent=MS.gene08797.t1
chr4.2 CDS 12949615 12949667 12949615 ID=cds.MS.gene08797.t1;Parent=MS.gene08797.t1
chr4.2 exon 12949759 12949786 12949759 ID=MS.gene08797.t1.exon12;Parent=MS.gene08797.t1
chr4.2 CDS 12949759 12949786 12949759 ID=cds.MS.gene08797.t1;Parent=MS.gene08797.t1
chr4.2 exon 12949908 12949982 12949908 ID=MS.gene08797.t1.exon13;Parent=MS.gene08797.t1
chr4.2 CDS 12949908 12949982 12949908 ID=cds.MS.gene08797.t1;Parent=MS.gene08797.t1
chr4.2 exon 12950872 12950976 12950872 ID=MS.gene08797.t1.exon14;Parent=MS.gene08797.t1
chr4.2 CDS 12950872 12950976 12950872 ID=cds.MS.gene08797.t1;Parent=MS.gene08797.t1
chr4.2 exon 12951779 12951868 12951779 ID=MS.gene08797.t1.exon15;Parent=MS.gene08797.t1
chr4.2 CDS 12951779 12951868 12951779 ID=cds.MS.gene08797.t1;Parent=MS.gene08797.t1
chr4.2 exon 12952496 12952585 12952496 ID=MS.gene08797.t1.exon16;Parent=MS.gene08797.t1
chr4.2 CDS 12952496 12952585 12952496 ID=cds.MS.gene08797.t1;Parent=MS.gene08797.t1
Gene Sequence

>MS.gene08797

ATGATGAAGAAGAAAGTTCCCGATTGGCTTAACAGCTCTCTCTGGTCAGCACCCACTGTTCCTCACTCCCCCGCCGCGGCTACCACCACCACCACCACCACCACCGAAGAATCCTCTCCCGTCCACAGCCCAATTTCACCTCCCCAACCTCCGTCTCCTCCCATCGTAGTTCAAGATCCTCCGCCTAAGCAGATAATTGAAGATTCGCGATCCGACGATCACCATGACCACGATGTGCCTCCTTCCGCTTACGACGTCTCTCACCATGCTCAATTATTGACTGAGGTAGTTCCACTTTAACAACTGATTCAACGTATTTGTTTATTATGGTGTTTGTGAGTTTTGATTTTTGGAATGGTTTGTTTTTGTTTTGGTTCAGTTGTCGAAGAAGGTGATGGATATGCGGGAATTGAGGAGGATCTCATGTCAAGGTGTGCCTGATTCTGCTGGGATACGTTCTACATTGTGGAAGGTGTTATTGCTATTTCTCTTTCAAACTGTTTTCTCATTGATATTAGTTATGATTATTGATGTCTTGTTTTTCGCGGCAAAGAATGGAAATGCAGTGATGGAAGTGCATTGATGATTCCCAAATAGGGGATTTAGTTAGTATAGACTATATGTTCTTTTTTGTTATGGAAAGAAGCAAGTGAAATTATAGAAAAGTATTATCGCAACTTACGCTTATTGATGTTTGCAGCTTTTGCTTGGATATCTTCCACCGGATCGAGCGCTTTGGTCATCTGAATTAGCTAAGAAGAGGTCACAGTACAAACAGTTCAAAGAGGAGATTCTAATGAATCCTGTAAGTCAACTGCTTAGGAACAAAGTTGTGTAATGTTATCATCTCAGATTATGGGGTGGAGGGGTGTTTTGAATGATTCTTTAATCGTGAGTTGTTGGTAGGTTGTACTAAAATCTGTAGAATCAAATTACATTTCTTTGCACATCATCTCCAATCTCTATTGGTTCTTACATCAAACTACTGGCTAGGGGAAGAGAGATAATTCTAAGGAGTATATTATCAAATTAATTTTTAAATATGATCTGATTTTACTGTTTTTTCTGTTACATTGGTGGATTACATGTTTGTCCAAGTGCAATCTTTGTTGACTTGGTGATTTTTAATGCATGTTGTTCTATTTGCTTTATCTTTTTGGCTCTGAATGTTTCTGTCGCTAGCTAGTCAGAAATCACAAGGAGGATGTACAACTCCACTATTGGTGATGCTGATGATGCCGCCAAACGTGACAGGGCCTTGCTCTCTAGATCAGAAATTCCTCATGATGAGCATCCTTTGAGTCTTGGGAAGACCAGTGTATGGAATCAGTTCTTCCAGGTACTATGCAAATGAATCTGTTTTCGTTAGACATTTGAATATTTCTATATGAAGTCACTGATCATGCATGGACTATCAACTTTGTTGTATATATAATCGATGAACGACACATCAATGCATGATACTTATCACACGTTACTTAAATTGATCCATTAATCTCTAGACTTTTTAATGCTTACTATATCACAAGTATATTAATTTGATCCTAATGTACTACTCCCTCCGTTTCAAAATGAGTGTCGCTTTAGGTGTTTACACACATATTAAGAAATGCAATGATTAAAAGAAAGAGAATGGTTATTTTACCAAATTATCCTTATTAACTATTGGTTAGTTTTAAAAGTAATACTTTGGAAGTAGTGTGCAGAGTATTAATTGGAGGGTACAATTGAAAAGAAAAAGTTATTATTGCATTGGAAACTGAAAGTGACATTCATTTTGAAACAAATTTTTTTGGCTAAAGCGACACTCATTTTGAAACGGAGGGAGTATAATGCTTTGGTATGCAAAGGCTGTTGTGATGTAAACGATCCTCATTGCATTCTGTAGGATACGGAAATCATAGATCAGATTGACCGAGATGTAAAGCGCACTCATCCTGATATGCATTTTTTCTCTGGTGATTCTAAATTTGCAAAATCTAACCAGGTTATTCCTTTATTTTTGTGGAAATTGGTATAGTCTCTCTATAATTCAAGTCTTTTCCAGCATGAACTTATTGGTTTTTTATTTTTGCTGACATTTTCAGGAGGCTTTAAAGAACATATTAATTATTTTTGCGAAGTTAAATCCAGGAGTAAAGTATGTCCAAGGGATGAATGAGTTATTGGCACCTCTATTCTATGTGTTCAAAAATGACCCAGACGAAGAAAATGCAGTGAGTATATTATATATTTTTGACTTGTAATCTCTTAGTTCTCAGTTTATAATCCATCATTGAGAAGAATATTACATATAACCCTGATGTTTTGTTAACCCCTTTTTGTAATGTCTTGTTAACCTCTTTTTGTAATCCATGCTTTGCTAAGTCCACCTGTAGTCTCCTTTACATTTAATTAATTATATTTTTGTTGTGTAAAATCTTATTAATTTATATTACATATTTTCCTAGGAACCTTTAACAATAATTTGTGTAACATTGATTTTGAAAATTCTGTTTAAAAAGTGCTTACCCGTGATAATCAGAAGCACCATATGCATACCTGTAATTCTTTACCTTTTCCACGCATAGAATTTCATGTTTTCTGTTTCCTCATTCCACTGGTTTATATTTCCAAGTGTATGCATAAATTAAAGGGGAAGCCATAATGGGGGTAGAGATGACAAATCAAAATTTAGGTGTGATCAGTATAAAGATATCATTAATTCCAATCTATAAGAACAAAGGGGATATACAACATTGCGCGAATTATAGGGGAATTAAGCTAATGAGTCATACCATGAAGTTATGGGAAAGGGTGATTGAGCGAAGACTAAGAAAAGAGACTCACGTTACGTACGGATAACCAATTTGGTTTTGTGCCTGGGAGGTCGACTATGGAAGCGATCTACTTACTTTGACGCGTGATGGAGCGACGGATAAAAAAGACTTACACTTAGTTTTCATTGATTTGGAGAAGGCGTATGATAGAGTACCTAGAGAGATTTTGTGGAAAGCCCTGGAGAGGAAAAGGGTGAGGATTGCCTATATTAGAGCTATCCAGGATAGGTATGAGGGAGCTTCGACTAGTGTGAGGACGCAAGATGGGGATACCGTAGATTTTCCCATAACAATAGGACTGCACCAAGGGTCAACCCTAAGTCCTTATCTTTTTACTTTAGTTTTGGATGTACTGACGGAACACATCCAAGAGTTAGCACAAAGATGTATGCTTTTTGCAGATGATGTAGTCTTGCTTGGTGAGTCGAGGGAGGAGTTAAATGGGAGGCTAGAGACCTGGAGGCAAGCCTTAGAAGCGTATGGCTTCTGCCTGAGTAGAAGCAAGACGGAGTATATGGAATGTAACTTCAGCAAAAGGAGAAGTGGGTCTACCTTGGAGGTGAAAGTTAGAGACCATATCATCCCCCAAGTTACACGGTTTAAATATCTTGGGTCCATAGTACAAAATGACGGAGAAATAGAAGCTGATGTACATCATCGTATTCAAACTGTGGTTGAAATGGAGAAGAGCCTCAGGTGTTTTGTGCGATAAGAAAGTACCACTTAAGCTGAAAGGAAAGTTCTATCAGACAACAACAGTCAGACCGGACGGAGTGTTGGGCGGTTAAGAGCCAACACGAGAGTAAAGTAAGTGTAGCGGAGATGAGGATGTTGTGATGGATGAGTGGTAAGACTAGACAGGATAGGATTAGGAATGACACCATTAGAGAGAGAGTGGGGTAGCACCTATAGTAGAAAAGTTGGTAGAAAATAGGCTTAGATGGTTTGGACATGTAGAGAGAAGACCCGTAGATGCCGTTGTAAGAAGAGTAGATCAAATGGAGGAGAGTCAGGTTAAAAGAGGTAGAGGAAGACCTAAAAAAACCATTCGAGAAACCATTAGAAAAGATTTAGAGGTCAATGAGTTGGATCCAAATATGGTTTTTGATAGAACACTATGGCGTCATTTGATCCATGTAGCCGACCCCACTTAGTGGGATAAGGCTTGGTTGTTGTTGTTGTTGTTGTATCAGTATAAAGGTAGCATTGCTCACGGGAATTTAGACAAGATATCTTGCTGTGATGTATGATCACGGGAAGGGAATGTGAAGAAAAAATTATTGTTAGTAATAAGGAGTCATGTATGATTATGGTGCATTTTATGTTCTCTTTTATTATTGGTTTATTGTGCTTAACAGCTCCCTATTACAATATGCAGGCCTTTGCTGAAGCTGATGCGTTCTTTTGTTTTGTTGAGCTATTGAGTGGGTTGCGAGATAACTTTGTTCAACAACTAGACAATAGTGTTGTGGGAATCCGTTCAACTATTACAAAATTGTCACAGCTTTTAAGAAAACATGATGAAGAGTTGTGGCGTCATCTTGAGATCACTTCCAAAGTAAGTGTTTTTAATATATTGTTACAGTTTTGCTTTTAGTTTACATCACTTCCAAAGTAAGAGTTTTTAATATATTGTTACAGTTTCGCTTTTAGTTTACATTTGGACATATATTGAGTAGGCTGTGCATCTATTTTAAATTATTATATATAGTATTTGATATTACAGTTGGCTAATTATTTTTTTGTTCGCACATTGTGGTATATACTGTTATGCAATTGATTGTGGTGTTTGTGCACTACTGTGTTCTATTAAATTTGTTAAATAAACTAACATGGAATATACAAAAATGCGGGCTCTTTCCTGCTTCATTGCTTTGATGATATTACTTCCTGTGTTAGAATTGTTATTTTGACTTTTAGTTTTTGTCTGTTAATACCTTTTTATGTTTATCCATCAATTAAGCAACAGGGAGGGGGTAATTAGTCTGTTTACAATTTTGTTTGCATACTTGCCAAATTATTCAACCATGTATTTGCTATTGGCTATTAAACAGTGTTTCAGTAATGGCTCACTTTTCTTCTTTTGAATGTCAGATCAATCCCCAATTCTATGCATTTAGGTGGATCACTCTCCTATTGACTCAGGAATTCAATTTTGCTGACAGCCTTCATATTTGGGACACTCTTTTAGGTGACCCAGAGGGTCCACAGGTACAATCTTGTTCCGATTTACTTTGTAAATAATTGATTGGCATGTAGCATTTCAGTAATGGCTCATGTTTCTTTGATGGAAATAATAAGTTAGATTGGATTTGAAGTTGCGAAGTTACTTTTAGTGTCAATTTGCTCATACTGGTGTTGATTTTTCATTAGTGTTTCACTTTGCATTGCTACTCTTATTCCACTTTAGAGGATCCCGATTGTGAAGAAAAGATGGAAGATATGGCCATATTATCGGGACATTAGAACACGTTTTTTTTTTCCCTCCTTATTTTCTTTTGTGCATGTGAGCGTGTTTCGTAAGTCTCCAGTTTTTAGTGACTATTGTTTGCTACTTGAAATTCCTGTTGCTTCTTAAACTGTATATAGAACTGGTGAGTGGTGATGGTAGATCGGGAAGTTAATGAGTTTGGGTAATGTATGTATCTTTTTTGTTCTTAAAAGAACTTAAATTGGGAAACTGACACAATGTTCTGCAGGAGACTCTTCTCCGGGTGTGTTGTGCAATGCTAATTCTCATTCGCAAGCGCCTCCTAGCGGGTGATTTCACTTCAAATCTCAAGCTGCTACAAAATTACCCGTCCACAAACATTAGCCATTTGCTCTATGTTGCCAATAAGTTTCGTGTACAGTCAGTCTAAGGGTTCTCGTTCCCCGCATTTTGCTTTTGTATCTCTAATTTAGTGTTTGAAATCCAATGTTTGTAAATGACTCTAAATTTGAGGCTGCAGCAACTATTTATTTTTCTCGTGCCTGATGAAACATGCGTATAATATTCACATCTCCCCAATCTTCAAAGAATAATAGTTTGTTTAGACATTGGATCAAATTGTGATGTGAAATTATCAAGTAAGTTATATTGGAGTATAGCTATTACGTAGCACACTATTTTGAAGTTATGATACTAGTTAGAGACCCGGGGGTAAGTTCTCGTGAGCTTAGCTCAGTTGGTATGGACATTACATAATATATGGAAGGTCCGGGGTTCAAACTCTGGCCACCACCAAAAAAAAGAGACCCGGGGTAAATTTTACTGATTTTGTTTGTATATTTTATTTTAAATACATAAGTAAAAATTAGTCAATTTGAATAATATAAAAAGATAAATGATATTTGTACAACCATTTATTGAGAACTCTCTCATATTCATACTATGTTCTTATTTTTTTTTCTCTATTGTTTTTGCTAATGAAAAAAAAAGTTGTTACAAAAATTGTTTCAAATGGTTGTTTAAATATCATTAATCTATTCATAAATATACCAAACTCATCTGCTTGAAATTTCTTTATCTCTTTGATGAAATTATTCTTAATAGTTTACCGTGTTGCACCTTCTGGTTGCCGTCGAAAAAATAGTTGTTGATTGGCATACTAATTTTGTTGCATATGCATAAAATCCTTTGTGTATAATGCATTAGTTTTTGGGAAATAAATTTTGTTTTTGAGTGAAAATAGTGTTCACTATTTTATACTACAATGAATAATTTGTATCTATGTAATTGTAACGTCTTTTTTTTTTTGTTACAATTATAACGTCTTTTTTAGTTCTATAAGTTTCTTTTTATTTGGATTAATCACTGTAACACTTAAAAACTGTTGTTTTCAGGCTCTGATGTCATACATGACACACTATAATAATGCCATATTGGGAAATAAGACGACATTAGAGTTGAAAATTAAGAGTCCCTGTGAACATAGTTTAGTTGGCATGATCATGCATTATTATATTCACCTTGAAAAAGGTAAATTCTAGCCACCGTTTTGCTTGGAATTATTTTTTTAAAATCAAGAAATAAGAAAACTTATATGAATTAGTCTAAAATGATATTTTAATCTACTTTTTATTTTACGGTCATGTTAACTTGAGCCCTAATGGCACATGTTAAGGAAGTCAAAATGAACAATTTTACATTGAAAAACACGATGATTTAACTTTTAAAAGTTGACTACACGATTTTTAATACGTATATTTTTATAATAAGTTCCTTAATATATGTCATTGAGGGCACAAGTTAACATTTGCCTTTATCTTAATATAAATTTTTGACTAGCTATTTTTTTTGTTTAAAAAAAATGTAAAAAATGATTTTTGTCATTGTGATGAATAATATATAAAGTGGGTAAGAATCCCGTGAGCTTAGCTCAGTTGGTATGGATATTACATATTATATGCAGAAGTCGGGGTTCGAACCTCGAACACTCAACTTCTCCGCAATTAAATTGTACCAGCTGACAAAAAAAAATAAAAATAAAGCGGGCAAGACAGAAAAGTGTAGTAGCAGGTGAGATTCATTGATTGATTCGGATCCCTTTTTCCTTTCTATATTTGATTTGATTCATTCACTCGCTTAAACCGTACTTCAACTTGTAATTCGTCAGATTCAGACCCAAAGCAATGGTGCGATACACACTGAATCTTCTTCTTCTTCTTCATCATCGCAATTTTCCATCTTTTCAATTCATTCTATTCTCTGTGTGTTTGATTTCAGGGTAGCACAACATTACGCTTATACTTAACCTGCATTCGCAACACACTCGATGCTGCTATGTGCCTCCAGGTTCACTAGCTCACACCATTTTCTATATTCATTCATTTTGTTTCCGATCGATCATCAATCATATTTTCGTAATTGCAGAATTTTCCTTGTCAAGAAGTTGAAAGACATAACAAACCCGAGGTTGAACTCAAGTAAGCATTTTCTCACTTACTCCGATTTATGTTAAGATTTTCACCTAACTAACTTAATTGAATTGACGTTCCTTTTTTCTTTTATTTGCAGGACCAGTCCTGAACTCCTTCTAAATCCTGTAAGACCCCCATCTTATATCATATTTACATATAATCCTATCTAAATGATGTATGCTTTAAAGAAATTATTTATTGTTGCATCAATGCTTCATTGAAAATTGTGTGCTGCTGCTGTTATAGGTTTTGATATGCCGGAACGAGGCTGAAAAATGCTTAATAGAAACCTCTATCAATTCATTAAGGATAAGTCTTAAGGTAAACCTTTTTTCTTCTTTTTTGTCATATGAAATTATTTCTAATCTCAAATTCGTCTCTGCCCTTGTTCATATCATGTATTATTCATTATAGTCTCACTAAATAGGTCTCTGCAAGTGGCATGTGGCACTAGTCCAAAGATACCCTTAAGGGGTTTCAACATCGTACCTTTCTTTTTAGGATTAGGAGTTAGGACTACTGATCTTAGAAATGTTATTAGGTAAGACCTATATACATGGGATGCAACTGTTGAAATGGGTTTTGTAATGTTTTGCCAGAAAAGTGCGTCTATATTCTATGTAACGGTTAGTTACATTCAGCCCCTTTTTTCTTCACTAGAATTGTTTTTTTTTAATAGCACCATCATTATTACTATGATATATTTGATAGGAACTGAGTCTGTTGGCAGATATATGTGTCTAGTACAATCAGTTTTCAGAGGTCTTCTTAGATGGCGTGTTGAAATCTATCAAGTTATATCCTTTAGTTAAATAAATTCAGATTTGTGAATTTAGATGATAACAGCGCTAATGGTTCATTGATCATACTGGGGTTGAATTATGGTAGAAGAGTTTTTAATATAAGTTTTAGTGATTTAGTAAATTATATAATATTTTGGATACATTCATCCTTTCTTGATGTTTGTTGCATTCTCTCCCAATACAAGAGCATCTTTAAGGCGCCAAAGTAGCAATAAATTGGCTACAAATCTTGTGCTTCAATTAACTTGTGGTGATAATTCATAATTTAATTCTATTAGCAGATAAGCAAGCTATATCAAAATTAGAATATGTTAGCAACCATCAGATTTACAGACGAATTGCTAATATTCATTGTTATTTGTCCCTAATTCCTTATTCTTATTTTATTTTTAATTCATATTGTGCAGGTGAAGCAGGCTGATGAACTTGAAAACATATTGACGAAAAAATTTCTTAGATTTTTGTCAATGAGAGCCGAGGCTTTCCAAGTACTGAGGAGAAAGCCTGTGCAGGTTTATAGCTCTTGTTTCCTTTTAAATTTAACTACGGTGTCTGGCGATAATTTTTCGATCAAATAAATTAATGTTTAGATATTGGTGATAGGTAAAATAACGGTGCAGGGCAGAGGGATAACTTTGTATGAAGTTTCATTGAATCTAGAGAGTAAAAATATTTGTCGAGTTTGCCTCAGATATTGCATGTTTCCGTGATTGTATATGGAATTAATACCTCCTTGTTATTGCCAAGCATAGGCCTACATACAACATACTCTATTACTATCAAGTCTTGTCTTGTTCATCCTCTAATTCCTAGTTAACCTTAGATTGAAAAGGTGATAGAAAATCATCTTCACACACAATACACTTAGACAGGTGAGGTGAGGAAGTGTCGACTTACAAATAATCCTCATATTTAATTTATTTTCCCCTTCTACTTTAGCACCATTATATATACATATGAGTGTCTTTAGAGTAATGGTTCAGGAATCACTGAATATAGAGTTTTTTATTGATCAATTTTCTGTGTAGTTGGTTGTGCTGTGTGTGGGAGTTCATTCTACAAAGCCTCAGTTTCCTTATAGTAACATTCAAAGAATTGTGGCATTGACATTAAATGCTACATTTTTTTTTATAAAATCATTCACTTTTGATTCCTTAACAAGTTCACTTAGTAGTAGTGGTTCATATTTGTTTTTCTAAATTCACTGTGGTGGATTATTTGCCTTGCTAACAATGTTACGATTCTTGCTGGACAATCGTTAATGCAGGACATAGCAAATCAGAAAGTCATATTTTTTGTTATTTCTCTTGGCAGGGATATGATATTAGCTTCCTTATTACAAATTACCATTGTGAGGAGATGCAGAAGCAAAAACTCATAGATTTTATAGTGCAATTCATGGAGGTAAGAATTTATTGACCCTATAACTTATTTTGCATTTCATTTTGTGGCTTGTACTGATATTGATTGAAATCTATGTGACATTTTCTGAAATGATATCGGAAGTCCAACCTTTAAAATGTCAATTACCTGAATGCTGCAAATAATTTAATGATATCAAAACTTGTACCATTTAGAAAACATTACATACTACCATAAAACAAAACAAAAAGAACAACATTTTGATATTCTTTTATTAGGCTGTAACAATATGTTTCAATTCTCAAGGGCGGTATGGTGCACTAGGGGCTTGCTTACTGCTTTTCCATTAACATACTTGTAGTTGGTACTTGGTACAGTACACACTTATTGTAGAGGCATGTCTGCTATACTTGTGTTGAATCAAAATATTTACTGATTACTGATGTAAACTTCCCAAAAAATGATAATATGAATTAGAGCAAGATGATGTTTTCTGTTGCCTACTTTTGCTGTAGCCTTTCTGAGATGTAAAGTGTTTACTCTCATTGATCCATTGCATGTTTCCTTTGTGCAAAGACTTGTCAATACTTTTTCTTCTTTTTCTACCATTACTGTAATTCTTCTGCTTTGTTGGCATCTACTAGCATACTAACGACTTTTAAATTACAGGATATCGATAAGGAGATAAGCGAGCTCAAAATGTCAGTGAACACACGGGGGAGGCTTGTGGCTACAGAGTTTCTGAAGCAGTTTATCTGA
Protein sequence

>MS.gene08797.t1

MMKKKVPDWLNSSLWSAPTVPHSPAAATTTTTTTTEESSPVHSPISPPQPPSPPIVVQDPPPKQIIEDSRSDDHHDHDVPPSAYDVSHHAQLLTELSKKVMDMRELRRISCQGVPDSAGIRSTLWKLLLGYLPPDRALWSSELAKKRSQYKQFKEEILMNPSEITRRMYNSTIGDADDAAKRDRALLSRSEIPHDEHPLSLGKTSVWNQFFQDTEIIDQIDRDVKRTHPDMHFFSGDSKFAKSNQEALKNILIIFAKLNPGVKYVQGMNELLAPLFYVFKNDPDEENAAFAEADAFFCFVELLSGLRDNFVQQLDNSVVGIRSTITKLSQLLRKHDEELWRHLEITSKINPQFYAFRWITLLLTQEFNFADSLHIWDTLLGDPEGPQETLLRVCCAMLILIRKRLLAGDFTSNLKLLQNYPSTNISHLLYVANKFRGSTTLRLYLTCIRNTLDAAMCLQNFPCQEVERHNKPEVELKTSPELLLNPVLICRNEAEKCLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPVQGYDISFLITNYHCEEMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQFI