Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20231.t1 | RHN48429.1 | 93.1 | 754 | 48 | 2 | 1 | 754 | 1 | 750 | 0.00E+00 | 1197.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20231.t1 | A0A396H574 | 93.1 | 754 | 48 | 2 | 1 | 754 | 1 | 750 | 0.0e+00 | 1197.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051914 | MS.gene20231 | 0.824253 | 8.92E-54 | -1.69E-46 |
| MS.gene052308 | MS.gene20231 | 0.836609 | 8.47E-57 | -1.69E-46 |
| MS.gene053173 | MS.gene20231 | 0.803299 | 3.73E-49 | -1.69E-46 |
| MS.gene053348 | MS.gene20231 | 0.843579 | 1.28E-58 | -1.69E-46 |
| MS.gene054551 | MS.gene20231 | 0.812895 | 3.37E-51 | -1.69E-46 |
| MS.gene054593 | MS.gene20231 | 0.832846 | 7.49E-56 | -1.69E-46 |
| MS.gene054633 | MS.gene20231 | 0.820479 | 6.71E-53 | -1.69E-46 |
| MS.gene055308 | MS.gene20231 | 0.816452 | 5.49E-52 | -1.69E-46 |
| MS.gene055578 | MS.gene20231 | 0.843653 | 1.23E-58 | -1.69E-46 |
| MS.gene056041 | MS.gene20231 | 0.840495 | 8.40E-58 | -1.69E-46 |
| MS.gene05640 | MS.gene20231 | 0.832092 | 1.15E-55 | -1.69E-46 |
| MS.gene056526 | MS.gene20231 | 0.801828 | 7.49E-49 | -1.69E-46 |
| MS.gene056528 | MS.gene20231 | 0.818255 | 2.16E-52 | -1.69E-46 |
| MS.gene057358 | MS.gene20231 | 0.807126 | 5.89E-50 | -1.69E-46 |
| MS.gene057359 | MS.gene20231 | 0.808915 | 2.45E-50 | -1.69E-46 |
| MS.gene058013 | MS.gene20231 | 0.805311 | 1.42E-49 | -1.69E-46 |
| MS.gene058128 | MS.gene20231 | 0.837196 | 5.99E-57 | -1.69E-46 |
| MS.gene058853 | MS.gene20231 | 0.819888 | 9.17E-53 | -1.69E-46 |
| MS.gene059553 | MS.gene20231 | 0.815195 | 1.05E-51 | -1.69E-46 |
| MS.gene060473 | MS.gene20231 | 0.829673 | 4.51E-55 | -1.69E-46 |
| MS.gene060565 | MS.gene20231 | 0.814527 | 1.47E-51 | -1.69E-46 |
| MS.gene06093 | MS.gene20231 | 0.813647 | 2.30E-51 | -1.69E-46 |
| MS.gene061099 | MS.gene20231 | 0.824181 | 9.27E-54 | -1.69E-46 |
| MS.gene061260 | MS.gene20231 | 0.823332 | 1.47E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20231.t1 | MTR_7g100700 | 96.154 | 754 | 24 | 3 | 1 | 754 | 1 | 749 | 0.0 | 1440 |
| MS.gene20231.t1 | MTR_1g066870 | 47.032 | 657 | 294 | 19 | 17 | 649 | 17 | 643 | 8.13e-106 | 337 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20231.t1 | AT3G53320 | 34.983 | 303 | 153 | 12 | 19 | 297 | 16 | 298 | 5.48e-25 | 110 |
| MS.gene20231.t1 | AT2G37070 | 40.602 | 133 | 64 | 5 | 19 | 144 | 18 | 142 | 9.92e-16 | 81.3 |
| MS.gene20231.t1 | AT2G37070 | 40.602 | 133 | 64 | 5 | 19 | 144 | 18 | 142 | 1.34e-15 | 80.9 |
Find 149 sgRNAs with CRISPR-Local
Find 254 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTCGTCTAGCTCTGGGATTC+TGG | 0.097225 | 7.1:-7809684 | MS.gene20231:CDS |
| GGTAGCTGCACTAGCAATTT+TGG | 0.153480 | 7.1:+7809712 | None:intergenic |
| TTTCTTCTTGCGGAATTAAA+TGG | 0.190171 | 7.1:+7808301 | None:intergenic |
| TCCAATTACCACCAAAATTC+AGG | 0.233828 | 7.1:-7810286 | MS.gene20231:intron |
| TGACTGGCCAGGAGTTAATT+TGG | 0.237626 | 7.1:+7808396 | None:intergenic |
| GTGTTAATGTTTAGGGGTTT+TGG | 0.243930 | 7.1:-7809933 | MS.gene20231:intron |
| AACACTAAGCGATGCTCTTT+TGG | 0.247393 | 7.1:+7808636 | None:intergenic |
| ACAAACCTTTGCTTAATTCT+TGG | 0.254223 | 7.1:+7807066 | None:intergenic |
| TCAAGAAACAAAACTGAATC+TGG | 0.266121 | 7.1:-7808211 | MS.gene20231:CDS |
| CCAAAGATTGGTTTCTTTGA+TGG | 0.281624 | 7.1:-7807842 | MS.gene20231:CDS |
| CTTGCAGCTTTGCTTTGATT+TGG | 0.294963 | 7.1:+7807519 | None:intergenic |
| CCAGCTGTTGTGAGAGTAAT+CGG | 0.300895 | 7.1:-7808944 | MS.gene20231:CDS |
| TAAGTTGCTACCGGAAGATT+TGG | 0.323444 | 7.1:+7808345 | None:intergenic |
| AATGATTCATCAATATGATT+TGG | 0.323598 | 7.1:+7807437 | None:intergenic |
| CCAGCTCCTGCAAAACCTTC+AGG | 0.325778 | 7.1:-7807881 | MS.gene20231:CDS |
| TGAAACTGAAAGTGTTGATT+TGG | 0.331552 | 7.1:-7809789 | MS.gene20231:CDS |
| CCATACCATTGGATTTATCT+TGG | 0.343022 | 7.1:+7807129 | None:intergenic |
| TGTGAATCCATTTCGACCTT+AGG | 0.344717 | 7.1:-7809830 | MS.gene20231:CDS |
| GACAAGGCAAAACACATAAA+TGG | 0.346572 | 7.1:-7808592 | MS.gene20231:CDS |
| AGCGAAGCCCGATGGTGTTC+TGG | 0.355565 | 7.1:+7808234 | None:intergenic |
| TCGTCTAGCTCTGGGATTCT+GGG | 0.368045 | 7.1:-7809683 | MS.gene20231:CDS |
| CCCAGAGCTAGACGACATTC+TGG | 0.369940 | 7.1:+7809691 | None:intergenic |
| CAAAGATTGGTTTCTTTGAT+GGG | 0.372758 | 7.1:-7807841 | MS.gene20231:CDS |
| CACCCCTACCAGCATTGATA+TGG | 0.384562 | 7.1:-7807024 | MS.gene20231:CDS |
| AGCAACTTATCTGATAATAT+TGG | 0.387973 | 7.1:-7808331 | MS.gene20231:CDS |
| ACCAGAATGTCGTCTAGCTC+TGG | 0.390989 | 7.1:-7809692 | MS.gene20231:CDS |
| CGACTGCCTTCGCCAAAGAT+TGG | 0.391284 | 7.1:-7807854 | MS.gene20231:CDS |
| CCATCAAAGAAACCAATCTT+TGG | 0.394047 | 7.1:+7807842 | None:intergenic |
| GGGCAGGAGGCTCAGCAAAA+TGG | 0.394670 | 7.1:-7807953 | MS.gene20231:CDS |
| TATACATCCTCTTCAATCCT+TGG | 0.397018 | 7.1:+7809860 | None:intergenic |
| GCAAGAAGAAACGTTATTGC+TGG | 0.399942 | 7.1:-7808289 | MS.gene20231:CDS |
| GAATTTGCACTAGGCTTTGT+TGG | 0.406749 | 7.1:+7808670 | None:intergenic |
| ATCAACCAACTTACCTGTGC+TGG | 0.411015 | 7.1:-7806910 | MS.gene20231:CDS |
| TTGGATAATATTGTGGACTT+AGG | 0.412150 | 7.1:+7808415 | None:intergenic |
| TCTTTCGCAGATTGAACTTA+GGG | 0.413908 | 7.1:+7810079 | None:intergenic |
| TGGTGGTAATTGGAAGAAAC+GGG | 0.413945 | 7.1:+7810295 | None:intergenic |
| TACATCACTGTCGCATGAAA+TGG | 0.416230 | 7.1:-7807327 | MS.gene20231:CDS |
| TCTTTGACATCGTTGTTTAT+CGG | 0.416620 | 7.1:+7810370 | None:intergenic |
| TTGGTGGTAATTGGAAGAAA+CGG | 0.418940 | 7.1:+7810294 | None:intergenic |
| CTCTTTCGCAGATTGAACTT+AGG | 0.423818 | 7.1:+7810078 | None:intergenic |
| TCAGCAACTTCCAAATCTTC+CGG | 0.426512 | 7.1:-7808355 | MS.gene20231:CDS |
| ATCGCTCCCTAAGGTCGAAA+TGG | 0.427949 | 7.1:+7809823 | None:intergenic |
| CATCTGTTATTGAAGGTTCA+AGG | 0.431926 | 7.1:-7808447 | MS.gene20231:CDS |
| GTATAAATTCTCAGATTTCT+CGG | 0.431931 | 7.1:-7807994 | MS.gene20231:CDS |
| TTTGGAGGGTGATTTGTTTG+AGG | 0.435278 | 7.1:-7809771 | MS.gene20231:CDS |
| CCCTCCCGCCAGAACACCAT+CGG | 0.440512 | 7.1:-7808242 | MS.gene20231:CDS |
| GTGAATCCATTTCGACCTTA+GGG | 0.441776 | 7.1:-7809829 | MS.gene20231:CDS |
| CATCAATATGATTTGGATGT+GGG | 0.447348 | 7.1:+7807444 | None:intergenic |
| GAACTATCACACATGTGTTT+AGG | 0.449363 | 7.1:+7808079 | None:intergenic |
| AGCAATAACGTTTCTTCTTG+CGG | 0.458182 | 7.1:+7808291 | None:intergenic |
| AACACATGTGTGATAGTTCA+AGG | 0.461632 | 7.1:-7808075 | MS.gene20231:CDS |
| TTTGTAATGCTTTCCAGCAC+AGG | 0.466793 | 7.1:+7806897 | None:intergenic |
| ATCAACACTTTCAGTTTCAA+AGG | 0.467451 | 7.1:+7809793 | None:intergenic |
| TGAAGGCATCACCTGCTTCA+AGG | 0.467661 | 7.1:-7808973 | MS.gene20231:CDS |
| TGTGGTATTTGTGTAAAAGT+AGG | 0.484204 | 7.1:+7808899 | None:intergenic |
| CCCGATGGTGTTCTGGCGGG+AGG | 0.485779 | 7.1:+7808241 | None:intergenic |
| CTGGCGGGAGGGCGAGATGA+GGG | 0.488219 | 7.1:+7808253 | None:intergenic |
| TTGTCTTGGTTGATATTGAC+TGG | 0.491915 | 7.1:+7808380 | None:intergenic |
| ATTCGATAACTCCATACCAT+TGG | 0.498382 | 7.1:+7807118 | None:intergenic |
| GCTTTCCAGCACAGGTAAGT+TGG | 0.501226 | 7.1:+7806905 | None:intergenic |
| GAATTATCAGTCAAAGTGTA+AGG | 0.507200 | 7.1:-7807931 | MS.gene20231:CDS |
| ATCTGCGAAAGAGTTTAGCT+TGG | 0.507998 | 7.1:-7810068 | MS.gene20231:CDS |
| TCTGCGAAAGAGTTTAGCTT+GGG | 0.510391 | 7.1:-7810067 | MS.gene20231:CDS |
| TTCTTTGTTTCAGATGTCTG+AGG | 0.511993 | 7.1:+7810108 | None:intergenic |
| CCGCTAGTTCTGTTAGTGAC+TGG | 0.512313 | 7.1:-7808132 | MS.gene20231:CDS |
| CAAGAAACAAAACTGAATCT+GGG | 0.519601 | 7.1:-7808210 | MS.gene20231:CDS |
| TCATCAATATGATTTGGATG+TGG | 0.521364 | 7.1:+7807443 | None:intergenic |
| CCTCCCGCCAGAACACCATC+GGG | 0.521771 | 7.1:-7808241 | MS.gene20231:CDS |
| TTGGTTGATATTGACTGGCC+AGG | 0.525155 | 7.1:+7808385 | None:intergenic |
| TCAAGAGCATCTGTTATTGA+AGG | 0.525511 | 7.1:-7808454 | MS.gene20231:CDS |
| AGTTAATTTGGATAATATTG+TGG | 0.526161 | 7.1:+7808408 | None:intergenic |
| GGCTTTGTTGGCACCTTCGA+CGG | 0.527206 | 7.1:+7808682 | None:intergenic |
| CCAAGATAAATCCAATGGTA+TGG | 0.527305 | 7.1:-7807129 | MS.gene20231:CDS |
| TAGGGGTGACACATTGATAC+GGG | 0.528043 | 7.1:+7807039 | None:intergenic |
| GCTGGTAGATTCCTTGAAGC+AGG | 0.530424 | 7.1:+7808962 | None:intergenic |
| ATCTGTTATTGAAGGTTCAA+GGG | 0.532151 | 7.1:-7808446 | MS.gene20231:CDS |
| GACTCCCTCCTTGTAGCGAC+AGG | 0.532486 | 7.1:+7808718 | None:intergenic |
| TCCACATATCATAAGCGAAA+AGG | 0.535480 | 7.1:-7808614 | MS.gene20231:CDS |
| GAACATAAATTCCAAGACTC+AGG | 0.536096 | 7.1:-7807201 | MS.gene20231:CDS |
| GCTAGAGTTACTATCAATGC+TGG | 0.539482 | 7.1:+7808051 | None:intergenic |
| TATTGAAGGTTCAAGGGGTA+CGG | 0.540244 | 7.1:-7808440 | MS.gene20231:CDS |
| ATCTATTTCAAAGCCGTCGA+AGG | 0.540506 | 7.1:-7808695 | MS.gene20231:CDS |
| CCAGAATGTCGTCTAGCTCT+GGG | 0.542743 | 7.1:-7809691 | MS.gene20231:CDS |
| AAGCCCGATGGTGTTCTGGC+GGG | 0.543148 | 7.1:+7808238 | None:intergenic |
| TATCGGAGAAGCGTCGGAGT+CGG | 0.545556 | 7.1:+7810387 | None:intergenic |
| TCTTTGGCGAAGGCAGTCGC+AGG | 0.546881 | 7.1:+7807858 | None:intergenic |
| CCGATTACTCTCACAACAGC+TGG | 0.547872 | 7.1:+7808944 | None:intergenic |
| AACTGAAAGTGTTGATTTGG+AGG | 0.547878 | 7.1:-7809786 | MS.gene20231:CDS |
| TCTGGCGGGAGGGCGAGATG+AGG | 0.548702 | 7.1:+7808252 | None:intergenic |
| TATAATTGAAGGTGTTGAGA+AGG | 0.549903 | 7.1:-7809891 | MS.gene20231:CDS |
| GTAGGGGTGACACATTGATA+CGG | 0.550011 | 7.1:+7807038 | None:intergenic |
| TGTTAGTGACTGGTCTTCAG+AGG | 0.550980 | 7.1:-7808122 | MS.gene20231:CDS |
| ACTGACCTGTGTCGATCACC+AGG | 0.551921 | 7.1:-7807279 | MS.gene20231:CDS |
| TGCCATATCAATGCTGGTAG+GGG | 0.552572 | 7.1:+7807022 | None:intergenic |
| ATATTATCCAAATTAACTCC+TGG | 0.553361 | 7.1:-7808403 | MS.gene20231:CDS |
| TCAGACACTAATGCAGATCA+AGG | 0.554880 | 7.1:-7808016 | MS.gene20231:CDS |
| TGATAGTAACTCTAGCAGAA+AGG | 0.557439 | 7.1:-7808044 | MS.gene20231:CDS |
| GAGTTAACTAGTATAATTGA+AGG | 0.559085 | 7.1:-7809902 | MS.gene20231:CDS |
| TTGCCATATCAATGCTGGTA+GGG | 0.559511 | 7.1:+7807021 | None:intergenic |
| GGTTAAACTATCGCTCCCTA+AGG | 0.567132 | 7.1:+7809814 | None:intergenic |
| ATTATCAGATAAGTTGCTAC+CGG | 0.571364 | 7.1:+7808336 | None:intergenic |
| TTTCTTGAAGCGAAGCCCGA+TGG | 0.578631 | 7.1:+7808226 | None:intergenic |
| CAGTCACTAACAGAACTAGC+GGG | 0.579052 | 7.1:+7808133 | None:intergenic |
| GAAATTGTGGAATTTGCACT+AGG | 0.580738 | 7.1:+7808661 | None:intergenic |
| ACTGTCCTGGTGATCGACAC+AGG | 0.584353 | 7.1:+7807274 | None:intergenic |
| CCGATGGTGTTCTGGCGGGA+GGG | 0.584412 | 7.1:+7808242 | None:intergenic |
| GGCTTGCTAAAACATGGAGC+AGG | 0.585668 | 7.1:-7807557 | MS.gene20231:CDS |
| AAAGATTGGTTTCTTTGATG+GGG | 0.587295 | 7.1:-7807840 | MS.gene20231:intron |
| AAGTGTAAGGACTGCTTCTG+TGG | 0.593654 | 7.1:-7807918 | MS.gene20231:CDS |
| CAGCTGTTGTGAGAGTAATC+GGG | 0.596424 | 7.1:-7808943 | MS.gene20231:CDS |
| GCGGGAGGGCGAGATGAGGG+AGG | 0.596464 | 7.1:+7808256 | None:intergenic |
| CCACACTCTTCTGTGTCTCA+CGG | 0.596515 | 7.1:-7807578 | MS.gene20231:CDS |
| AAGAAACCAATCTTTGGCGA+AGG | 0.598647 | 7.1:+7807848 | None:intergenic |
| GAAGGCAGTCGCAGGCCTGA+AGG | 0.602125 | 7.1:+7807866 | None:intergenic |
| GATTGTTTGATCGAACAAGT+TGG | 0.602661 | 7.1:-7807230 | MS.gene20231:CDS |
| GGGATCGAGAAGAGAATCAT+CGG | 0.607587 | 7.1:+7810315 | None:intergenic |
| GTTGTTTATCGGAGAAGCGT+CGG | 0.613172 | 7.1:+7810381 | None:intergenic |
| AACATTACCAAGGATTGAAG+AGG | 0.617361 | 7.1:-7809867 | MS.gene20231:CDS |
| AGCTGCTAGAAAGGTTGGCG+TGG | 0.617848 | 7.1:-7809548 | MS.gene20231:CDS |
| TGGCGTGGTTCCTCGCAACA+AGG | 0.620806 | 7.1:-7809533 | MS.gene20231:intron |
| TGAAGTTGCCATATCAATGC+TGG | 0.621101 | 7.1:+7807016 | None:intergenic |
| AAAGCCTGTCGCTACAAGGA+GGG | 0.622729 | 7.1:-7808722 | MS.gene20231:intron |
| GAAGCCCGATGGTGTTCTGG+CGG | 0.624470 | 7.1:+7808237 | None:intergenic |
| AGCTTCCAAGATAAATCCAA+TGG | 0.625508 | 7.1:-7807134 | MS.gene20231:CDS |
| TGGTGATCGACACAGGTCAG+TGG | 0.625686 | 7.1:+7807281 | None:intergenic |
| ATGTAAGTTACCTTGTTGCG+AGG | 0.626684 | 7.1:+7809523 | None:intergenic |
| TCCTCAGTGCGCACTCCACG+TGG | 0.629069 | 7.1:-7807611 | MS.gene20231:CDS |
| TATCATAAGCGAAAAGGACA+AGG | 0.631796 | 7.1:-7808608 | MS.gene20231:CDS |
| CGTCTAGCTCTGGGATTCTG+GGG | 0.633762 | 7.1:-7809682 | MS.gene20231:CDS |
| TCAGTGCGCACTCCACGTGG+TGG | 0.638649 | 7.1:-7807608 | MS.gene20231:CDS |
| TCTGTTATTGAAGGTTCAAG+GGG | 0.639649 | 7.1:-7808445 | MS.gene20231:CDS |
| CCAGTCACTAACAGAACTAG+CGG | 0.641140 | 7.1:+7808132 | None:intergenic |
| GGAGCAGGAAGTTCAAGTGA+AGG | 0.642645 | 7.1:-7807542 | MS.gene20231:CDS |
| TGTGGTTGCGCTCCACCACG+TGG | 0.647882 | 7.1:+7807596 | None:intergenic |
| TCTCACGGCTTGCTAAAACA+TGG | 0.649356 | 7.1:-7807563 | MS.gene20231:CDS |
| TATCATGATAGACACTGTCC+TGG | 0.654242 | 7.1:+7807261 | None:intergenic |
| TTGATATGGCAACTTCAGCA+AGG | 0.657298 | 7.1:-7807010 | MS.gene20231:CDS |
| GTTGCCATATCAATGCTGGT+AGG | 0.660587 | 7.1:+7807020 | None:intergenic |
| ACTGAAAGTGTTGATTTGGA+GGG | 0.665976 | 7.1:-7809785 | MS.gene20231:CDS |
| AGTCACTAACAGAACTAGCG+GGG | 0.666195 | 7.1:+7808134 | None:intergenic |
| AAAAGCCTGTCGCTACAAGG+AGG | 0.670329 | 7.1:-7808723 | MS.gene20231:intron |
| AAGACTCAGGAAAAGATCAA+CGG | 0.677530 | 7.1:-7807188 | MS.gene20231:CDS |
| CCGTGAGACACAGAAGAGTG+TGG | 0.683825 | 7.1:+7807578 | None:intergenic |
| TTGAGAAGGAAACATTACCA+AGG | 0.691255 | 7.1:-7809877 | MS.gene20231:CDS |
| GTCACTAACAGAACTAGCGG+GGG | 0.703043 | 7.1:+7808135 | None:intergenic |
| TATGGAGTTATCGAATCACA+AGG | 0.703342 | 7.1:-7807111 | MS.gene20231:CDS |
| AAGGCAAAACACATAAATGG+CGG | 0.718948 | 7.1:-7808589 | MS.gene20231:intron |
| AGGGGTGACACATTGATACG+GGG | 0.749012 | 7.1:+7807040 | None:intergenic |
| ACCACGTGGAGTGCGCACTG+AGG | 0.755457 | 7.1:+7807610 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAGAAATGAAAAATT+AGG | + | chr7.1:7807030-7807049 | None:intergenic | 10.0% |
| !!! | TTGATTTATTTATTTTCTAT+TGG | - | chr7.1:7807323-7807342 | MS.gene20231:CDS | 10.0% |
| !!! | TTTTTCAATTTCTTAAAAAT+AGG | - | chr7.1:7807279-7807298 | MS.gene20231:CDS | 10.0% |
| !!! | ATTTTTATCGTTTATCAAAA+TGG | + | chr7.1:7808253-7808272 | None:intergenic | 15.0% |
| !!! | TCTTCAAATTTTTTTGAATT+CGG | + | chr7.1:7807116-7807135 | None:intergenic | 15.0% |
| !! | AATGATTCATCAATATGATT+TGG | + | chr7.1:7809844-7809863 | None:intergenic | 20.0% |
| !! | ATATGTGATTCTATTAACTA+TGG | - | chr7.1:7809597-7809616 | MS.gene20231:intron | 20.0% |
| !! | TAAAGAGATGAAGATTAAAT+TGG | + | chr7.1:7809636-7809655 | None:intergenic | 20.0% |
| !!! | AGTTAATTTGGATAATATTG+TGG | + | chr7.1:7808873-7808892 | None:intergenic | 20.0% |
| !!! | ATCGTAAATGAAATTTTAAG+TGG | - | chr7.1:7808484-7808503 | MS.gene20231:intron | 20.0% |
| !!! | CAACAAAAATACTATAGTTT+TGG | + | chr7.1:7807862-7807881 | None:intergenic | 20.0% |
| ! | AAAAACCAAGAATTAAGCAA+AGG | - | chr7.1:7810207-7810226 | MS.gene20231:intron | 25.0% |
| ! | AAATTTACTACAACTCAGAA+AGG | + | chr7.1:7808776-7808795 | None:intergenic | 25.0% |
| ! | AAGTTTCATTCAGATTCAAT+TGG | + | chr7.1:7807063-7807082 | None:intergenic | 25.0% |
| ! | AATCGTAAGTTAGTATAACT+AGG | + | chr7.1:7808440-7808459 | None:intergenic | 25.0% |
| ! | AATTTGTATCATTATGACCT+TGG | - | chr7.1:7809528-7809547 | MS.gene20231:intron | 25.0% |
| ! | AGCAACTTATCTGATAATAT+TGG | - | chr7.1:7808947-7808966 | MS.gene20231:CDS | 25.0% |
| ! | ATAATGCTTATTCAAAACTG+AGG | - | chr7.1:7807651-7807670 | MS.gene20231:intron | 25.0% |
| ! | ATATTATCCAAATTAACTCC+TGG | - | chr7.1:7808875-7808894 | MS.gene20231:intron | 25.0% |
| ! | ATCATGTTGTCTCAATAAAA+AGG | + | chr7.1:7807906-7807925 | None:intergenic | 25.0% |
| ! | GAGTTAACTAGTATAATTGA+AGG | - | chr7.1:7807376-7807395 | MS.gene20231:CDS | 25.0% |
| ! | GTATAAATTCTCAGATTTCT+CGG | - | chr7.1:7809284-7809303 | MS.gene20231:intron | 25.0% |
| ! | TAAGTTAGTATAACTAGGAA+AGG | + | chr7.1:7808435-7808454 | None:intergenic | 25.0% |
| ! | TAATGCTTATTCAAAACTGA+GGG | - | chr7.1:7807652-7807671 | MS.gene20231:intron | 25.0% |
| ! | TATCAAAATGGAAAGCAATT+AGG | + | chr7.1:7808241-7808260 | None:intergenic | 25.0% |
| !! | AAAAATGTGAACCTGAATTT+TGG | + | chr7.1:7807006-7807025 | None:intergenic | 25.0% |
| !! | AAAAGATTCATTTTGCAACA+TGG | - | chr7.1:7810305-7810324 | MS.gene20231:CDS | 25.0% |
| !!! | TCTAGTTTTTTGTTTGCAAT+TGG | + | chr7.1:7809802-7809821 | None:intergenic | 25.0% |
| !!! | TCTATTGGTGTTAATGTTTA+GGG | - | chr7.1:7807338-7807357 | MS.gene20231:CDS | 25.0% |
| !!! | TTAATCCTCATTTTTGCATA+AGG | - | chr7.1:7808746-7808765 | MS.gene20231:intron | 25.0% |
| !!! | TTCTATTGGTGTTAATGTTT+AGG | - | chr7.1:7807337-7807356 | MS.gene20231:CDS | 25.0% |
| !!! | TTGCTTAATTCTTGGTTTTT+AGG | + | chr7.1:7810207-7810226 | None:intergenic | 25.0% |
| !!! | TTTCGATTGATTTTAGATGA+AGG | - | chr7.1:7808288-7808307 | MS.gene20231:CDS | 25.0% |
| ACAAACCTTTGCTTAATTCT+TGG | + | chr7.1:7810215-7810234 | None:intergenic | 30.0% | |
| ATAGAATCACATATTACACG+TGG | + | chr7.1:7809591-7809610 | None:intergenic | 30.0% | |
| ATCAACACTTTCAGTTTCAA+AGG | + | chr7.1:7807488-7807507 | None:intergenic | 30.0% | |
| ATCTGTTATTGAAGGTTCAA+GGG | - | chr7.1:7808832-7808851 | MS.gene20231:intron | 30.0% | |
| ATTATCAGATAAGTTGCTAC+CGG | + | chr7.1:7808945-7808964 | None:intergenic | 30.0% | |
| CAAGAAACAAAACTGAATCT+GGG | - | chr7.1:7809068-7809087 | MS.gene20231:intron | 30.0% | |
| GAATTATCAGTCAAAGTGTA+AGG | - | chr7.1:7809347-7809366 | MS.gene20231:intron | 30.0% | |
| GACTATGTCAAACATAAAGA+AGG | + | chr7.1:7809476-7809495 | None:intergenic | 30.0% | |
| TAATCTTCATCTCTTTATGC+AGG | - | chr7.1:7809639-7809658 | MS.gene20231:intron | 30.0% | |
| TATGTCAAACATAAAGAAGG+CGG | + | chr7.1:7809473-7809492 | None:intergenic | 30.0% | |
| TCAAGAAACAAAACTGAATC+TGG | - | chr7.1:7809067-7809086 | MS.gene20231:intron | 30.0% | |
| TCTTTGACATCGTTGTTTAT+CGG | + | chr7.1:7806911-7806930 | None:intergenic | 30.0% | |
| TGCTACAAAAATTGAACAGT+GGG | - | chr7.1:7807139-7807158 | MS.gene20231:CDS | 30.0% | |
| TGTGGTATTTGTGTAAAAGT+AGG | + | chr7.1:7808382-7808401 | None:intergenic | 30.0% | |
| TTAAATTAGTTGCATACCTG+TGG | + | chr7.1:7808400-7808419 | None:intergenic | 30.0% | |
| TTGGATAATATTGTGGACTT+AGG | + | chr7.1:7808866-7808885 | None:intergenic | 30.0% | |
| TTTCTTCTTGCGGAATTAAA+TGG | + | chr7.1:7808980-7808999 | None:intergenic | 30.0% | |
| ! | AAATGAATCTTTTGCTGCAA+AGG | + | chr7.1:7810298-7810317 | None:intergenic | 30.0% |
| ! | AATGAATCTTTTGCTGCAAA+GGG | + | chr7.1:7810297-7810316 | None:intergenic | 30.0% |
| ! | AGAAGTGCAATATCAATTCT+AGG | - | chr7.1:7808168-7808187 | MS.gene20231:CDS | 30.0% |
| ! | CATCAATATGATTTGGATGT+GGG | + | chr7.1:7809837-7809856 | None:intergenic | 30.0% |
| ! | TACTTTTACACAAATACCAC+AGG | - | chr7.1:7808381-7808400 | MS.gene20231:CDS | 30.0% |
| ! | TCATCAATATGATTTGGATG+TGG | + | chr7.1:7809838-7809857 | None:intergenic | 30.0% |
| !! | AAAGATTGGTTTCTTTGATG+GGG | - | chr7.1:7809438-7809457 | MS.gene20231:intron | 30.0% |
| !! | CAAAGATTGGTTTCTTTGAT+GGG | - | chr7.1:7809437-7809456 | MS.gene20231:intron | 30.0% |
| !! | CTATTGGTGTTAATGTTTAG+GGG | - | chr7.1:7807339-7807358 | MS.gene20231:CDS | 30.0% |
| !! | TATAATTGAAGGTGTTGAGA+AGG | - | chr7.1:7807387-7807406 | MS.gene20231:CDS | 30.0% |
| !! | TGAAACTGAAAGTGTTGATT+TGG | - | chr7.1:7807489-7807508 | MS.gene20231:CDS | 30.0% |
| !! | TGCAATATCAATTCTAGGAT+AGG | - | chr7.1:7808173-7808192 | MS.gene20231:CDS | 30.0% |
| !!! | ATTACATCCCAAGTTTTGAA+AGG | + | chr7.1:7808090-7808109 | None:intergenic | 30.0% |
| !!! | GGAGTGATTTTAACTTAGAA+GGG | - | chr7.1:7809305-7809324 | MS.gene20231:intron | 30.0% |
| !!! | TTACATCCCAAGTTTTGAAA+GGG | + | chr7.1:7808089-7808108 | None:intergenic | 30.0% |
| AAAAACTCACAGTCTCTAGT+TGG | + | chr7.1:7807625-7807644 | None:intergenic | 35.0% | |
| AACACATGTGTGATAGTTCA+AGG | - | chr7.1:7809203-7809222 | MS.gene20231:intron | 35.0% | |
| AACATTACCAAGGATTGAAG+AGG | - | chr7.1:7807411-7807430 | MS.gene20231:CDS | 35.0% | |
| AAGACTCAGGAAAAGATCAA+CGG | - | chr7.1:7810090-7810109 | MS.gene20231:CDS | 35.0% | |
| AAGGCAAAACACATAAATGG+CGG | - | chr7.1:7808689-7808708 | MS.gene20231:CDS | 35.0% | |
| AAGTAATCTTGAGAAGAGAC+AGG | + | chr7.1:7808007-7808026 | None:intergenic | 35.0% | |
| AGCAATAACGTTTCTTCTTG+CGG | + | chr7.1:7808990-7809009 | None:intergenic | 35.0% | |
| AGCTTCCAAGATAAATCCAA+TGG | - | chr7.1:7810144-7810163 | MS.gene20231:CDS | 35.0% | |
| AGTAATCTTGAGAAGAGACA+GGG | + | chr7.1:7808006-7808025 | None:intergenic | 35.0% | |
| ATTCGATAACTCCATACCAT+TGG | + | chr7.1:7810163-7810182 | None:intergenic | 35.0% | |
| CACTTAACAGTAGGATCATA+AGG | + | chr7.1:7807979-7807998 | None:intergenic | 35.0% | |
| CATCTGTTATTGAAGGTTCA+AGG | - | chr7.1:7808831-7808850 | MS.gene20231:intron | 35.0% | |
| CCAAGATAAATCCAATGGTA+TGG | - | chr7.1:7810149-7810168 | MS.gene20231:CDS | 35.0% | |
| CCATACCATTGGATTTATCT+TGG | + | chr7.1:7810152-7810171 | None:intergenic | 35.0% | |
| CCATCAAAGAAACCAATCTT+TGG | + | chr7.1:7809439-7809458 | None:intergenic | 35.0% | |
| CTGCTACAAAAATTGAACAG+TGG | - | chr7.1:7807138-7807157 | MS.gene20231:CDS | 35.0% | |
| GAAAAACCAATACATGGCTA+TGG | + | chr7.1:7809569-7809588 | None:intergenic | 35.0% | |
| GAAATTGTGGAATTTGCACT+AGG | + | chr7.1:7808620-7808639 | None:intergenic | 35.0% | |
| GAACATAAATTCCAAGACTC+AGG | - | chr7.1:7810077-7810096 | MS.gene20231:CDS | 35.0% | |
| GAACTATCACACATGTGTTT+AGG | + | chr7.1:7809202-7809221 | None:intergenic | 35.0% | |
| GACAAGGCAAAACACATAAA+TGG | - | chr7.1:7808686-7808705 | MS.gene20231:CDS | 35.0% | |
| GATTGTTTGATCGAACAAGT+TGG | - | chr7.1:7810048-7810067 | MS.gene20231:CDS | 35.0% | |
| GCATTCCTTATGCAAAAATG+AGG | + | chr7.1:7808754-7808773 | None:intergenic | 35.0% | |
| GTGGACATTGATATACATTC+AGG | + | chr7.1:7808132-7808151 | None:intergenic | 35.0% | |
| TATACATCCTCTTCAATCCT+TGG | + | chr7.1:7807421-7807440 | None:intergenic | 35.0% | |
| TATCATAAGCGAAAAGGACA+AGG | - | chr7.1:7808670-7808689 | MS.gene20231:CDS | 35.0% | |
| TATGGAGTTATCGAATCACA+AGG | - | chr7.1:7810167-7810186 | MS.gene20231:CDS | 35.0% | |
| TATTTCTTACCGAGTGAGAT+TGG | - | chr7.1:7807926-7807945 | MS.gene20231:CDS | 35.0% | |
| TCCAATTACCACCAAAATTC+AGG | - | chr7.1:7806992-7807011 | MS.gene20231:CDS | 35.0% | |
| TCCACATATCATAAGCGAAA+AGG | - | chr7.1:7808664-7808683 | MS.gene20231:CDS | 35.0% | |
| TCTATGTAACCAATCTCACT+CGG | + | chr7.1:7807938-7807957 | None:intergenic | 35.0% | |
| TCTGTTATTGAAGGTTCAAG+GGG | - | chr7.1:7808833-7808852 | MS.gene20231:intron | 35.0% | |
| TCTTTCGCAGATTGAACTTA+GGG | + | chr7.1:7807202-7807221 | None:intergenic | 35.0% | |
| TGATAGTAACTCTAGCAGAA+AGG | - | chr7.1:7809234-7809253 | MS.gene20231:intron | 35.0% | |
| TGATATTGCACTTCTGTGAT+GGG | + | chr7.1:7808163-7808182 | None:intergenic | 35.0% | |
| TGTTTCCCCTTTCAAAACTT+GGG | - | chr7.1:7808080-7808099 | MS.gene20231:CDS | 35.0% | |
| TTGAGAAGGAAACATTACCA+AGG | - | chr7.1:7807401-7807420 | MS.gene20231:CDS | 35.0% | |
| TTGATATTGCACTTCTGTGA+TGG | + | chr7.1:7808164-7808183 | None:intergenic | 35.0% | |
| ! | AATGTGAACCTGAATTTTGG+TGG | + | chr7.1:7807003-7807022 | None:intergenic | 35.0% |
| ! | CATTTTCAGAAAACGAAGCT+TGG | - | chr7.1:7807084-7807103 | MS.gene20231:CDS | 35.0% |
| ! | GTGTTAATGTTTAGGGGTTT+TGG | - | chr7.1:7807345-7807364 | MS.gene20231:CDS | 35.0% |
| ! | TCCTTTTCGCTTATGATATG+TGG | + | chr7.1:7808668-7808687 | None:intergenic | 35.0% |
| ! | TGCTCTTTTGGATGAAATTG+TGG | + | chr7.1:7808633-7808652 | None:intergenic | 35.0% |
| ! | TTCTTTGTTTCAGATGTCTG+AGG | + | chr7.1:7807173-7807192 | None:intergenic | 35.0% |
| ! | TTGGTGGTAATTGGAAGAAA+CGG | + | chr7.1:7806987-7807006 | None:intergenic | 35.0% |
| ! | TTGTCTTGGTTGATATTGAC+TGG | + | chr7.1:7808901-7808920 | None:intergenic | 35.0% |
| !! | AACTGAAAGTGTTGATTTGG+AGG | - | chr7.1:7807492-7807511 | MS.gene20231:CDS | 35.0% |
| !! | ACACAATTTCAGCTTTAGAC+AGG | + | chr7.1:7808210-7808229 | None:intergenic | 35.0% |
| !! | ACCTGAATTTTGGTGGTAAT+TGG | + | chr7.1:7806996-7807015 | None:intergenic | 35.0% |
| !! | ACTGAAAGTGTTGATTTGGA+GGG | - | chr7.1:7807493-7807512 | MS.gene20231:CDS | 35.0% |
| !! | CCAAAGATTGGTTTCTTTGA+TGG | - | chr7.1:7809436-7809455 | MS.gene20231:intron | 35.0% |
| !! | TCAAGAGCATCTGTTATTGA+AGG | - | chr7.1:7808824-7808843 | MS.gene20231:intron | 35.0% |
| !!! | ACTGCTTTTTTCACTAATGC+TGG | - | chr7.1:7807236-7807255 | MS.gene20231:CDS | 35.0% |
| !!! | CGGAGTGATTTTAACTTAGA+AGG | - | chr7.1:7809304-7809323 | MS.gene20231:intron | 35.0% |
| !!! | GATTTTATCTCTGAAGTTGC+TGG | + | chr7.1:7810351-7810370 | None:intergenic | 35.0% |
| !!! | TACATCCCAAGTTTTGAAAG+GGG | + | chr7.1:7808088-7808107 | None:intergenic | 35.0% |
| !!! | TCTTTTTTCAGCTGCTAGAA+AGG | - | chr7.1:7807721-7807740 | MS.gene20231:intron | 35.0% |
| !!! | TGATTTTAACTTAGAAGGGC+AGG | - | chr7.1:7809309-7809328 | MS.gene20231:intron | 35.0% |
| AAGAAACCAATCTTTGGCGA+AGG | + | chr7.1:7809433-7809452 | None:intergenic | 40.0% | |
| AATACATGGCTATGGCTTTC+AGG | + | chr7.1:7809561-7809580 | None:intergenic | 40.0% | |
| ATCTATTTCAAAGCCGTCGA+AGG | - | chr7.1:7808583-7808602 | MS.gene20231:intron | 40.0% | |
| ATCTGCGAAAGAGTTTAGCT+TGG | - | chr7.1:7807210-7807229 | MS.gene20231:CDS | 40.0% | |
| ATGTAAGTTACCTTGTTGCG+AGG | + | chr7.1:7807758-7807777 | None:intergenic | 40.0% | |
| CACGTGGAAAAACCAATACA+TGG | + | chr7.1:7809575-7809594 | None:intergenic | 40.0% | |
| CAGCTGAAAAAAGAGAGTCA+AGG | + | chr7.1:7807715-7807734 | None:intergenic | 40.0% | |
| CAGGGTTAACACTTAACAGT+AGG | + | chr7.1:7807988-7808007 | None:intergenic | 40.0% | |
| CATTCAGGTCAAAGTTCCAA+AGG | + | chr7.1:7808117-7808136 | None:intergenic | 40.0% | |
| CTCTTTCGCAGATTGAACTT+AGG | + | chr7.1:7807203-7807222 | None:intergenic | 40.0% | |
| CTGTTTCCCCTTTCAAAACT+TGG | - | chr7.1:7808079-7808098 | MS.gene20231:CDS | 40.0% | |
| CTTGCAGCTTTGCTTTGATT+TGG | + | chr7.1:7809762-7809781 | None:intergenic | 40.0% | |
| GATATTGCACTTCTGTGATG+GGG | + | chr7.1:7808162-7808181 | None:intergenic | 40.0% | |
| GCAAGAAGAAACGTTATTGC+TGG | - | chr7.1:7808989-7809008 | MS.gene20231:intron | 40.0% | |
| GCTAGAGTTACTATCAATGC+TGG | + | chr7.1:7809230-7809249 | None:intergenic | 40.0% | |
| GTGAATCCATTTCGACCTTA+GGG | - | chr7.1:7807449-7807468 | MS.gene20231:CDS | 40.0% | |
| TAAGTTGCTACCGGAAGATT+TGG | + | chr7.1:7808936-7808955 | None:intergenic | 40.0% | |
| TACATCACTGTCGCATGAAA+TGG | - | chr7.1:7809951-7809970 | MS.gene20231:intron | 40.0% | |
| TATCATGATAGACACTGTCC+TGG | + | chr7.1:7810020-7810039 | None:intergenic | 40.0% | |
| TATTGAAGGTTCAAGGGGTA+CGG | - | chr7.1:7808838-7808857 | MS.gene20231:intron | 40.0% | |
| TCAGACACTAATGCAGATCA+AGG | - | chr7.1:7809262-7809281 | MS.gene20231:intron | 40.0% | |
| TCAGCAACTTCCAAATCTTC+CGG | - | chr7.1:7808923-7808942 | MS.gene20231:CDS | 40.0% | |
| TGAAAGCCATAGCCATGTAT+TGG | - | chr7.1:7809560-7809579 | MS.gene20231:intron | 40.0% | |
| TGAAGTTGCCATATCAATGC+TGG | + | chr7.1:7810265-7810284 | None:intergenic | 40.0% | |
| TGGTGGTAATTGGAAGAAAC+GGG | + | chr7.1:7806986-7807005 | None:intergenic | 40.0% | |
| TGTGAATCCATTTCGACCTT+AGG | - | chr7.1:7807448-7807467 | MS.gene20231:CDS | 40.0% | |
| TTGATATGGCAACTTCAGCA+AGG | - | chr7.1:7810268-7810287 | MS.gene20231:intron | 40.0% | |
| TTGCCATATCAATGCTGGTA+GGG | + | chr7.1:7810260-7810279 | None:intergenic | 40.0% | |
| TTGGGATGTAATTCCACCTT+TGG | - | chr7.1:7808098-7808117 | MS.gene20231:CDS | 40.0% | |
| TTTGTAATGCTTTCCAGCAC+AGG | + | chr7.1:7810384-7810403 | None:intergenic | 40.0% | |
| ! | AACACTAAGCGATGCTCTTT+TGG | + | chr7.1:7808645-7808664 | None:intergenic | 40.0% |
| ! | GAATTTGCACTAGGCTTTGT+TGG | + | chr7.1:7808611-7808630 | None:intergenic | 40.0% |
| ! | GTTGATCTTTTCCTGAGTCT+TGG | + | chr7.1:7810091-7810110 | None:intergenic | 40.0% |
| ! | TCTGCGAAAGAGTTTAGCTT+GGG | - | chr7.1:7807211-7807230 | MS.gene20231:CDS | 40.0% |
| ! | TTTTCAGCTGCTAGAAAGGT+TGG | - | chr7.1:7807725-7807744 | MS.gene20231:intron | 40.0% |
| !! | TTTGGAGGGTGATTTGTTTG+AGG | - | chr7.1:7807507-7807526 | MS.gene20231:CDS | 40.0% |
| !!! | GGAAGTTGCTGATTTTGTCT+TGG | + | chr7.1:7808915-7808934 | None:intergenic | 40.0% |
| !!! | TTTTAACTTAGAAGGGCAGG+AGG | - | chr7.1:7809312-7809331 | MS.gene20231:intron | 40.0% |
| AAGTGTAAGGACTGCTTCTG+TGG | - | chr7.1:7809360-7809379 | MS.gene20231:intron | 45.0% | |
| AGTCACTAACAGAACTAGCG+GGG | + | chr7.1:7809147-7809166 | None:intergenic | 45.0% | |
| ATCAACCAACTTACCTGTGC+TGG | - | chr7.1:7810368-7810387 | MS.gene20231:CDS | 45.0% | |
| ATGGCGGTTAGTACTTGCAT+TGG | - | chr7.1:7808705-7808724 | MS.gene20231:CDS | 45.0% | |
| CAGCTGTTGTGAGAGTAATC+GGG | - | chr7.1:7808335-7808354 | MS.gene20231:CDS | 45.0% | |
| CAGTCACTAACAGAACTAGC+GGG | + | chr7.1:7809148-7809167 | None:intergenic | 45.0% | |
| CCAGCTGTTGTGAGAGTAAT+CGG | - | chr7.1:7808334-7808353 | MS.gene20231:CDS | 45.0% | |
| CCAGTCACTAACAGAACTAG+CGG | + | chr7.1:7809149-7809168 | None:intergenic | 45.0% | |
| GGGATCGAGAAGAGAATCAT+CGG | + | chr7.1:7806966-7806985 | None:intergenic | 45.0% | |
| GGTTAAACTATCGCTCCCTA+AGG | + | chr7.1:7807467-7807486 | None:intergenic | 45.0% | |
| GTAGGGGTGACACATTGATA+CGG | + | chr7.1:7810243-7810262 | None:intergenic | 45.0% | |
| GTTGCCATATCAATGCTGGT+AGG | + | chr7.1:7810261-7810280 | None:intergenic | 45.0% | |
| TAGGGGTGACACATTGATAC+GGG | + | chr7.1:7810242-7810261 | None:intergenic | 45.0% | |
| TCAGGTCAAAGTTCCAAAGG+TGG | + | chr7.1:7808114-7808133 | None:intergenic | 45.0% | |
| TGAAAAAGCCTGTCGCTACA+AGG | - | chr7.1:7808552-7808571 | MS.gene20231:intron | 45.0% | |
| TGCCATATCAATGCTGGTAG+GGG | + | chr7.1:7810259-7810278 | None:intergenic | 45.0% | |
| ! | GATTTGGATGTGGGTTTTGC+TGG | + | chr7.1:7809828-7809847 | None:intergenic | 45.0% |
| ! | GGTAGCTGCACTAGCAATTT+TGG | + | chr7.1:7807569-7807588 | None:intergenic | 45.0% |
| ! | GTTGTTTATCGGAGAAGCGT+CGG | + | chr7.1:7806900-7806919 | None:intergenic | 45.0% |
| ! | TCTGTGATGGGGTTACTTTG+TGG | + | chr7.1:7808151-7808170 | None:intergenic | 45.0% |
| ! | TGACTGGCCAGGAGTTAATT+TGG | + | chr7.1:7808885-7808904 | None:intergenic | 45.0% |
| ! | TTGGTTGATATTGACTGGCC+AGG | + | chr7.1:7808896-7808915 | None:intergenic | 45.0% |
| !! | CAGCTTTAGACAGGACAACA+TGG | + | chr7.1:7808201-7808220 | None:intergenic | 45.0% |
| !! | TCTCACGGCTTGCTAAAACA+TGG | - | chr7.1:7809715-7809734 | MS.gene20231:CDS | 45.0% |
| !! | TGTTAGTGACTGGTCTTCAG+AGG | - | chr7.1:7809156-7809175 | MS.gene20231:intron | 45.0% |
| !!! | TTTAGGGGTTTTGGATGCTG+AGG | - | chr7.1:7807354-7807373 | MS.gene20231:CDS | 45.0% |
| !!! | TAGTTTTTTTTTTTTTAAAA+AGG | - | chr7.1:7807836-7807855 | MS.gene20231:intron | 5.0% |
| AAAAGCCTGTCGCTACAAGG+AGG | - | chr7.1:7808555-7808574 | MS.gene20231:intron | 50.0% | |
| AAAGCCTGTCGCTACAAGGA+GGG | - | chr7.1:7808556-7808575 | MS.gene20231:intron | 50.0% | |
| AGGGGTGACACATTGATACG+GGG | + | chr7.1:7810241-7810260 | None:intergenic | 50.0% | |
| ATCGCTCCCTAAGGTCGAAA+TGG | + | chr7.1:7807458-7807477 | None:intergenic | 50.0% | |
| CCACACTCTTCTGTGTCTCA+CGG | - | chr7.1:7809700-7809719 | MS.gene20231:CDS | 50.0% | |
| CCGATTACTCTCACAACAGC+TGG | + | chr7.1:7808337-7808356 | None:intergenic | 50.0% | |
| GCTGGTAGATTCCTTGAAGC+AGG | + | chr7.1:7808319-7808338 | None:intergenic | 50.0% | |
| GCTTTCCAGCACAGGTAAGT+TGG | + | chr7.1:7810376-7810395 | None:intergenic | 50.0% | |
| GGAGCAGGAAGTTCAAGTGA+AGG | - | chr7.1:7809736-7809755 | MS.gene20231:CDS | 50.0% | |
| GTCACTAACAGAACTAGCGG+GGG | + | chr7.1:7809146-7809165 | None:intergenic | 50.0% | |
| TTTCTTGAAGCGAAGCCCGA+TGG | + | chr7.1:7809055-7809074 | None:intergenic | 50.0% | |
| ! | ACCAGAATGTCGTCTAGCTC+TGG | - | chr7.1:7807586-7807605 | MS.gene20231:CDS | 50.0% |
| ! | CTGAAGGTTTTGCAGGAGCT+GGG | + | chr7.1:7809399-7809418 | None:intergenic | 50.0% |
| ! | TGAAGGTTTTGCAGGAGCTG+GGG | + | chr7.1:7809398-7809417 | None:intergenic | 50.0% |
| !! | CACCCCTACCAGCATTGATA+TGG | - | chr7.1:7810254-7810273 | MS.gene20231:intron | 50.0% |
| !! | CCAGAATGTCGTCTAGCTCT+GGG | - | chr7.1:7807587-7807606 | MS.gene20231:CDS | 50.0% |
| !! | CCGCTAGTTCTGTTAGTGAC+TGG | - | chr7.1:7809146-7809165 | MS.gene20231:intron | 50.0% |
| !! | GGCTTGCTAAAACATGGAGC+AGG | - | chr7.1:7809721-7809740 | MS.gene20231:CDS | 50.0% |
| !! | TCGTCTAGCTCTGGGATTCT+GGG | - | chr7.1:7807595-7807614 | MS.gene20231:CDS | 50.0% |
| !! | TGAAGGCATCACCTGCTTCA+AGG | - | chr7.1:7808305-7808324 | MS.gene20231:CDS | 50.0% |
| ACTGTCCTGGTGATCGACAC+AGG | + | chr7.1:7810007-7810026 | None:intergenic | 55.0% | |
| AGCTGCTAGAAAGGTTGGCG+TGG | - | chr7.1:7807730-7807749 | MS.gene20231:intron | 55.0% | |
| CCAGCTCCTGCAAAACCTTC+AGG | - | chr7.1:7809397-7809416 | MS.gene20231:intron | 55.0% | |
| CCAGTTGAACCAGCCCATTG+GGG | + | chr7.1:7808053-7808072 | None:intergenic | 55.0% | |
| CCCAGAGCTAGACGACATTC+TGG | + | chr7.1:7807590-7807609 | None:intergenic | 55.0% | |
| CCCAGTTGAACCAGCCCATT+GGG | + | chr7.1:7808054-7808073 | None:intergenic | 55.0% | |
| CCGTGAGACACAGAAGAGTG+TGG | + | chr7.1:7809703-7809722 | None:intergenic | 55.0% | |
| CGACTGCCTTCGCCAAAGAT+TGG | - | chr7.1:7809424-7809443 | MS.gene20231:intron | 55.0% | |
| GCTAGATGTGCCACCCCAAT+GGG | - | chr7.1:7808037-7808056 | MS.gene20231:CDS | 55.0% | |
| TGCTAGATGTGCCACCCCAA+TGG | - | chr7.1:7808036-7808055 | MS.gene20231:CDS | 55.0% | |
| TGGTGATCGACACAGGTCAG+TGG | + | chr7.1:7810000-7810019 | None:intergenic | 55.0% | |
| ! | ACTGACCTGTGTCGATCACC+AGG | - | chr7.1:7809999-7810018 | MS.gene20231:intron | 55.0% |
| ! | CCTGAAGGTTTTGCAGGAGC+TGG | + | chr7.1:7809400-7809419 | None:intergenic | 55.0% |
| ! | GAAGGTTTTGCAGGAGCTGG+GGG | + | chr7.1:7809397-7809416 | None:intergenic | 55.0% |
| ! | GGCTTTCAGGTGTGTCACCA+AGG | + | chr7.1:7809548-7809567 | None:intergenic | 55.0% |
| !! | CCAATGGGCTGGTTCAACTG+GGG | - | chr7.1:7808052-7808071 | MS.gene20231:CDS | 55.0% |
| !! | CCCAATGGGCTGGTTCAACT+GGG | - | chr7.1:7808051-7808070 | MS.gene20231:CDS | 55.0% |
| !! | CGTCTAGCTCTGGGATTCTG+GGG | - | chr7.1:7807596-7807615 | MS.gene20231:CDS | 55.0% |
| !! | GGCTTTGTTGGCACCTTCGA+CGG | + | chr7.1:7808599-7808618 | None:intergenic | 55.0% |
| !! | GTCGTCTAGCTCTGGGATTC+TGG | - | chr7.1:7807594-7807613 | MS.gene20231:CDS | 55.0% |
| !! | TATCGGAGAAGCGTCGGAGT+CGG | + | chr7.1:7806894-7806913 | None:intergenic | 55.0% |
| AAGCCCGATGGTGTTCTGGC+GGG | + | chr7.1:7809043-7809062 | None:intergenic | 60.0% | |
| AGCGAAGCCCGATGGTGTTC+TGG | + | chr7.1:7809047-7809066 | None:intergenic | 60.0% | |
| CCCCAGTTGAACCAGCCCAT+TGG | + | chr7.1:7808055-7808074 | None:intergenic | 60.0% | |
| GAAGCCCGATGGTGTTCTGG+CGG | + | chr7.1:7809044-7809063 | None:intergenic | 60.0% | |
| GACTCCCTCCTTGTAGCGAC+AGG | + | chr7.1:7808563-7808582 | None:intergenic | 60.0% | |
| GGGCAGGAGGCTCAGCAAAA+TGG | - | chr7.1:7809325-7809344 | MS.gene20231:intron | 60.0% | |
| GTTGAACCAGCCCATTGGGG+TGG | + | chr7.1:7808050-7808069 | None:intergenic | 60.0% | |
| TCTTTGGCGAAGGCAGTCGC+AGG | + | chr7.1:7809423-7809442 | None:intergenic | 60.0% | |
| TGGCGTGGTTCCTCGCAACA+AGG | - | chr7.1:7807745-7807764 | MS.gene20231:intron | 60.0% | |
| ! | CGCAGGCCTGAAGGTTTTGC+AGG | + | chr7.1:7809406-7809425 | None:intergenic | 60.0% |
| !! | CCCCAATGGGCTGGTTCAAC+TGG | - | chr7.1:7808050-7808069 | MS.gene20231:CDS | 60.0% |
| !! | TGGGCTGGTTCAACTGGGGA+TGG | - | chr7.1:7808056-7808075 | MS.gene20231:CDS | 60.0% |
| ACCACGTGGAGTGCGCACTG+AGG | + | chr7.1:7809671-7809690 | None:intergenic | 65.0% | |
| CCCTCCCGCCAGAACACCAT+CGG | - | chr7.1:7809036-7809055 | MS.gene20231:intron | 65.0% | |
| CCGATGGTGTTCTGGCGGGA+GGG | + | chr7.1:7809039-7809058 | None:intergenic | 65.0% | |
| CCTCCCGCCAGAACACCATC+GGG | - | chr7.1:7809037-7809056 | MS.gene20231:intron | 65.0% | |
| GAAGGCAGTCGCAGGCCTGA+AGG | + | chr7.1:7809415-7809434 | None:intergenic | 65.0% | |
| GATGTGCCACCCCAATGGGC+TGG | - | chr7.1:7808041-7808060 | MS.gene20231:CDS | 65.0% | |
| TCAGTGCGCACTCCACGTGG+TGG | - | chr7.1:7809670-7809689 | MS.gene20231:CDS | 65.0% | |
| TCCTCAGTGCGCACTCCACG+TGG | - | chr7.1:7809667-7809686 | MS.gene20231:CDS | 65.0% | |
| TGTGGTTGCGCTCCACCACG+TGG | + | chr7.1:7809685-7809704 | None:intergenic | 65.0% | |
| CCCGATGGTGTTCTGGCGGG+AGG | + | chr7.1:7809040-7809059 | None:intergenic | 70.0% | |
| CTGGCGGGAGGGCGAGATGA+GGG | + | chr7.1:7809028-7809047 | None:intergenic | 70.0% | |
| TCTGGCGGGAGGGCGAGATG+AGG | + | chr7.1:7809029-7809048 | None:intergenic | 70.0% | |
| GCGGGAGGGCGAGATGAGGG+AGG | + | chr7.1:7809025-7809044 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 7806884 | 7810416 | 7806884 | ID=MS.gene20231 |
| chr7.1 | mRNA | 7806884 | 7810416 | 7806884 | ID=MS.gene20231.t1;Parent=MS.gene20231 |
| chr7.1 | exon | 7810287 | 7810416 | 7810287 | ID=MS.gene20231.t1.exon1;Parent=MS.gene20231.t1 |
| chr7.1 | CDS | 7810287 | 7810416 | 7810287 | ID=cds.MS.gene20231.t1;Parent=MS.gene20231.t1 |
| chr7.1 | exon | 7810043 | 7810207 | 7810043 | ID=MS.gene20231.t1.exon2;Parent=MS.gene20231.t1 |
| chr7.1 | CDS | 7810043 | 7810207 | 7810043 | ID=cds.MS.gene20231.t1;Parent=MS.gene20231.t1 |
| chr7.1 | exon | 7809666 | 7809941 | 7809666 | ID=MS.gene20231.t1.exon3;Parent=MS.gene20231.t1 |
| chr7.1 | CDS | 7809666 | 7809941 | 7809666 | ID=cds.MS.gene20231.t1;Parent=MS.gene20231.t1 |
| chr7.1 | exon | 7809534 | 7809568 | 7809534 | ID=MS.gene20231.t1.exon4;Parent=MS.gene20231.t1 |
| chr7.1 | CDS | 7809534 | 7809568 | 7809534 | ID=cds.MS.gene20231.t1;Parent=MS.gene20231.t1 |
| chr7.1 | exon | 7808898 | 7808996 | 7808898 | ID=MS.gene20231.t1.exon5;Parent=MS.gene20231.t1 |
| chr7.1 | CDS | 7808898 | 7808996 | 7808898 | ID=cds.MS.gene20231.t1;Parent=MS.gene20231.t1 |
| chr7.1 | exon | 7808590 | 7808740 | 7808590 | ID=MS.gene20231.t1.exon6;Parent=MS.gene20231.t1 |
| chr7.1 | CDS | 7808590 | 7808740 | 7808590 | ID=cds.MS.gene20231.t1;Parent=MS.gene20231.t1 |
| chr7.1 | exon | 7807841 | 7808493 | 7807841 | ID=MS.gene20231.t1.exon7;Parent=MS.gene20231.t1 |
| chr7.1 | CDS | 7807841 | 7808493 | 7807841 | ID=cds.MS.gene20231.t1;Parent=MS.gene20231.t1 |
| chr7.1 | exon | 7806884 | 7807639 | 7806884 | ID=MS.gene20231.t1.exon8;Parent=MS.gene20231.t1 |
| chr7.1 | CDS | 7806884 | 7807639 | 7806884 | ID=cds.MS.gene20231.t1;Parent=MS.gene20231.t1 |
| Gene Sequence |
| Protein sequence |
