Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23458.t1 | XP_013449922.1 | 97.2 | 737 | 21 | 0 | 1 | 737 | 1 | 737 | 0.00E+00 | 1441 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23458.t1 | B5WWZ9 | 78.7 | 742 | 151 | 3 | 3 | 737 | 8 | 749 | 0.0e+00 | 1197.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23458.t1 | A0A072UDR1 | 97.2 | 737 | 21 | 0 | 1 | 737 | 1 | 737 | 0.0e+00 | 1441.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene23458 | 0.814288 | 1.66E-51 | -1.69E-46 |
| MS.gene049151 | MS.gene23458 | 0.823634 | 1.25E-53 | -1.69E-46 |
| MS.gene049153 | MS.gene23458 | 0.809897 | 1.51E-50 | -1.69E-46 |
| MS.gene049260 | MS.gene23458 | 0.824595 | 7.41E-54 | -1.69E-46 |
| MS.gene049297 | MS.gene23458 | 0.824799 | 6.64E-54 | -1.69E-46 |
| MS.gene049599 | MS.gene23458 | -0.811458 | 6.93E-51 | -1.69E-46 |
| MS.gene049758 | MS.gene23458 | 0.839908 | 1.20E-57 | -1.69E-46 |
| MS.gene050226 | MS.gene23458 | 0.818466 | 1.93E-52 | -1.69E-46 |
| MS.gene050227 | MS.gene23458 | 0.829138 | 6.09E-55 | -1.69E-46 |
| MS.gene050228 | MS.gene23458 | 0.819181 | 1.33E-52 | -1.69E-46 |
| MS.gene050301 | MS.gene23458 | 0.808227 | 3.44E-50 | -1.69E-46 |
| MS.gene050330 | MS.gene23458 | -0.812683 | 3.75E-51 | -1.69E-46 |
| MS.gene050558 | MS.gene23458 | 0.819873 | 9.24E-53 | -1.69E-46 |
| MS.gene050623 | MS.gene23458 | -0.831187 | 1.92E-55 | -1.69E-46 |
| MS.gene050642 | MS.gene23458 | 0.852994 | 3.20E-61 | -1.69E-46 |
| MS.gene050787 | MS.gene23458 | 0.805034 | 1.62E-49 | -1.69E-46 |
| MS.gene05119 | MS.gene23458 | -0.810522 | 1.11E-50 | -1.69E-46 |
| MS.gene05127 | MS.gene23458 | -0.800717 | 1.26E-48 | -1.69E-46 |
| MS.gene051663 | MS.gene23458 | 0.802676 | 5.01E-49 | -1.69E-46 |
| MS.gene051860 | MS.gene23458 | 0.843597 | 1.27E-58 | -1.69E-46 |
| MS.gene051983 | MS.gene23458 | 0.839305 | 1.72E-57 | -1.69E-46 |
| MS.gene052207 | MS.gene23458 | 0.802129 | 6.49E-49 | -1.69E-46 |
| MS.gene052309 | MS.gene23458 | -0.855118 | 7.82E-62 | -1.69E-46 |
| MS.gene053836 | MS.gene23458 | 0.869544 | 2.86E-66 | -1.69E-46 |
| MS.gene054473 | MS.gene23458 | 0.831618 | 1.51E-55 | -1.69E-46 |
| MS.gene054930 | MS.gene23458 | 0.823364 | 1.44E-53 | -1.69E-46 |
| MS.gene054942 | MS.gene23458 | 0.838543 | 2.70E-57 | -1.69E-46 |
| MS.gene054983 | MS.gene23458 | 0.805682 | 1.19E-49 | -1.69E-46 |
| MS.gene055422 | MS.gene23458 | 0.816615 | 5.05E-52 | -1.69E-46 |
| MS.gene055816 | MS.gene23458 | -0.80873 | 2.68E-50 | -1.69E-46 |
| MS.gene056979 | MS.gene23458 | 0.8389 | 2.18E-57 | -1.69E-46 |
| MS.gene057121 | MS.gene23458 | 0.842174 | 3.04E-58 | -1.69E-46 |
| MS.gene057469 | MS.gene23458 | 0.829824 | 4.15E-55 | -1.69E-46 |
| MS.gene058002 | MS.gene23458 | 0.820315 | 7.32E-53 | -1.69E-46 |
| MS.gene05811 | MS.gene23458 | 0.860618 | 1.82E-63 | -1.69E-46 |
| MS.gene058142 | MS.gene23458 | 0.81512 | 1.09E-51 | -1.69E-46 |
| MS.gene058399 | MS.gene23458 | 0.815731 | 7.95E-52 | -1.69E-46 |
| MS.gene058710 | MS.gene23458 | 0.801566 | 8.48E-49 | -1.69E-46 |
| MS.gene058833 | MS.gene23458 | 0.834006 | 3.85E-56 | -1.69E-46 |
| MS.gene05907 | MS.gene23458 | 0.806589 | 7.64E-50 | -1.69E-46 |
| MS.gene059518 | MS.gene23458 | 0.818214 | 2.20E-52 | -1.69E-46 |
| MS.gene05984 | MS.gene23458 | 0.863068 | 3.24E-64 | -1.69E-46 |
| MS.gene059894 | MS.gene23458 | 0.812902 | 3.36E-51 | -1.69E-46 |
| MS.gene059899 | MS.gene23458 | 0.828856 | 7.12E-55 | -1.69E-46 |
| MS.gene060165 | MS.gene23458 | 0.82354 | 1.31E-53 | -1.69E-46 |
| MS.gene061071 | MS.gene23458 | 0.808161 | 3.55E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23458.t1 | MTR_7g097210 | 97.151 | 737 | 21 | 0 | 1 | 737 | 1 | 737 | 0.0 | 1480 |
| MS.gene23458.t1 | MTR_7g097210 | 97.707 | 567 | 13 | 0 | 171 | 737 | 1 | 567 | 0.0 | 1139 |
| MS.gene23458.t1 | MTR_4g080823 | 55.792 | 751 | 311 | 11 | 3 | 736 | 13 | 759 | 0.0 | 834 |
| MS.gene23458.t1 | MTR_4g080890 | 55.925 | 751 | 310 | 11 | 3 | 736 | 4 | 750 | 0.0 | 832 |
| MS.gene23458.t1 | MTR_0651s0010 | 54.615 | 650 | 275 | 10 | 3 | 636 | 4 | 649 | 0.0 | 696 |
| MS.gene23458.t1 | MTR_1g075650 | 54.593 | 577 | 214 | 7 | 164 | 735 | 3 | 536 | 0.0 | 645 |
| MS.gene23458.t1 | MTR_5g025650 | 42.273 | 783 | 390 | 14 | 7 | 737 | 56 | 828 | 0.0 | 570 |
| MS.gene23458.t1 | MTR_8g072210 | 42.933 | 757 | 378 | 13 | 25 | 737 | 63 | 809 | 0.0 | 546 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23458.t1 | AT4G28570 | 58.681 | 743 | 289 | 7 | 5 | 737 | 11 | 745 | 0.0 | 856 |
| MS.gene23458.t1 | AT4G28570 | 58.681 | 743 | 289 | 7 | 5 | 737 | 11 | 745 | 0.0 | 856 |
| MS.gene23458.t1 | AT3G23410 | 56.946 | 727 | 292 | 9 | 25 | 734 | 18 | 740 | 0.0 | 820 |
| MS.gene23458.t1 | AT3G23410 | 58.744 | 669 | 265 | 6 | 75 | 734 | 6 | 672 | 0.0 | 793 |
| MS.gene23458.t1 | AT1G03990 | 54.133 | 750 | 317 | 12 | 6 | 736 | 13 | 754 | 0.0 | 775 |
| MS.gene23458.t1 | AT4G19380 | 40.721 | 749 | 400 | 12 | 18 | 737 | 34 | 767 | 7.53e-174 | 517 |
| MS.gene23458.t1 | AT4G19380 | 41.081 | 740 | 392 | 12 | 27 | 737 | 1 | 725 | 2.51e-173 | 514 |
Find 168 sgRNAs with CRISPR-Local
Find 242 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAGAGACTTCTTTGTTTAA+TGG | 0.132897 | 7.3:+14139379 | None:intergenic |
| TGGATTCTGTCATTCAAATT+AGG | 0.139329 | 7.3:-14138496 | MS.gene23458:CDS |
| AAGGAAGTCTTTAAGAATTT+TGG | 0.142745 | 7.3:-14136525 | MS.gene23458:CDS |
| CAAATTCTCTGAGATTTCTT+TGG | 0.197447 | 7.3:-14138419 | MS.gene23458:CDS |
| TAGTTACTTTGGATTCTATT+TGG | 0.246811 | 7.3:+14136972 | None:intergenic |
| CTCACCAATGGCGTTGCTTC+TGG | 0.251725 | 7.3:+14138529 | None:intergenic |
| AAAATCTTAGAATTGGATTA+AGG | 0.256561 | 7.3:-14136544 | MS.gene23458:CDS |
| TTGTAGAACCGGAGATAAAA+AGG | 0.259716 | 7.3:-14137164 | MS.gene23458:CDS |
| CCATCCAGTTCAATTTGCTT+GGG | 0.271230 | 7.3:-14136864 | MS.gene23458:CDS |
| GGATTCTGTCATTCAAATTA+GGG | 0.293627 | 7.3:-14138495 | MS.gene23458:CDS |
| ATTATAGAAGCACCTGCTTT+AGG | 0.296752 | 7.3:-14136737 | MS.gene23458:CDS |
| TCATCCTTCTATACAACTTC+TGG | 0.300151 | 7.3:-14139343 | MS.gene23458:CDS |
| TTAATGGAATGGATGGAAAA+AGG | 0.300921 | 7.3:+14139395 | None:intergenic |
| GACAGAGAAAATCTTAGAAT+TGG | 0.302166 | 7.3:-14136551 | MS.gene23458:CDS |
| AAGTTATGATTCCTCCTTCA+TGG | 0.302332 | 7.3:+14136801 | None:intergenic |
| CATTGGTGAGGTGGATTCTA+TGG | 0.309210 | 7.3:-14138516 | MS.gene23458:CDS |
| TGAAGGTTCCTTCCAATGTT+TGG | 0.313050 | 7.3:+14136890 | None:intergenic |
| AAAACAAATGGATACCTCTA+AGG | 0.315779 | 7.3:-14138360 | MS.gene23458:CDS |
| CTTCATCTTCAGTGACTTCA+AGG | 0.331159 | 7.3:+14137707 | None:intergenic |
| TCCATCCAGTTCAATTTGCT+TGG | 0.335666 | 7.3:-14136865 | MS.gene23458:CDS |
| CTTGATACTGTCACGGTTGT+CGG | 0.340575 | 7.3:-14136410 | MS.gene23458:CDS |
| GTGGAGGTACTGCTATAAAC+TGG | 0.344574 | 7.3:-14137441 | MS.gene23458:CDS |
| TTGTCTCTATTAGTCCTTCC+TGG | 0.345240 | 7.3:+14137776 | None:intergenic |
| AAAGTGATCATCCTAGAAAA+AGG | 0.349522 | 7.3:-14137589 | MS.gene23458:CDS |
| CTGTTGAGGTTGGAACTTAT+AGG | 0.352665 | 7.3:-14136490 | MS.gene23458:CDS |
| AATCCAATGTGGAAGGCAAT+AGG | 0.357171 | 7.3:-14137847 | MS.gene23458:CDS |
| AGGGATCAAAGAAGAAGAAT+TGG | 0.361473 | 7.3:-14136441 | MS.gene23458:CDS |
| TGTCTCTAACCAATGCAAAA+AGG | 0.362568 | 7.3:+14136630 | None:intergenic |
| CATTGTCCAAAGTTCACTTC+TGG | 0.369671 | 7.3:+14136376 | None:intergenic |
| TGCTGTTACGGTTGTAGAAC+CGG | 0.371663 | 7.3:-14137175 | MS.gene23458:CDS |
| GTTTAGTTCTGCACATCAAA+TGG | 0.373441 | 7.3:-14136354 | MS.gene23458:CDS |
| CGGAAAGGGTGTGAGAGAAT+TGG | 0.375092 | 7.3:-14137253 | MS.gene23458:CDS |
| TCCTGGAGAGGCCTCTTCTT+CGG | 0.378893 | 7.3:+14137793 | None:intergenic |
| AACCTCTCAGATGCATGTAT+TGG | 0.383483 | 7.3:-14139434 | MS.gene23458:CDS |
| AACACAAACACCGCCCTTAG+AGG | 0.384539 | 7.3:+14138346 | None:intergenic |
| GGCCTTTCTCACTCAGGGAT+TGG | 0.385174 | 7.3:+14137728 | None:intergenic |
| CTCTTTGCTTGCATTGGAAG+TGG | 0.385444 | 7.3:-14138453 | MS.gene23458:CDS |
| ACATGATGAAATAGTTACTT+TGG | 0.389119 | 7.3:+14136961 | None:intergenic |
| GGATTGGATTAATGTAGAAT+TGG | 0.391272 | 7.3:+14137744 | None:intergenic |
| TTCTCAAGATTATTCTTCCT+TGG | 0.392128 | 7.3:-14137554 | MS.gene23458:CDS |
| GAGGGTGCAGTTGATGAGAA+TGG | 0.395238 | 7.3:-14136302 | MS.gene23458:CDS |
| GACTTCTTTGTTTAATGGAA+TGG | 0.401945 | 7.3:+14139384 | None:intergenic |
| TATTGCGGTTCGTGCTGTTA+CGG | 0.407724 | 7.3:-14137187 | MS.gene23458:CDS |
| TGATGAGAATGGAGAAAGTT+GGG | 0.414388 | 7.3:-14136291 | MS.gene23458:CDS |
| GTGGAACTCTTTGCTTGCAT+TGG | 0.416289 | 7.3:-14138459 | MS.gene23458:CDS |
| GCTTTCAAAATCAAGTTCTT+CGG | 0.428581 | 7.3:-14137273 | MS.gene23458:CDS |
| CGTCTACCTCCTCTCAATAG+AGG | 0.431157 | 7.3:+14139487 | None:intergenic |
| ATGAACGAGCTTTATGAATC+AGG | 0.431908 | 7.3:-14137520 | MS.gene23458:CDS |
| TTCTTATAGACTTGATCAAA+TGG | 0.433097 | 7.3:-14136573 | MS.gene23458:CDS |
| TCAGAGAATTTGAGAACAAA+AGG | 0.433449 | 7.3:+14138430 | None:intergenic |
| TTTGCATTGGTTAGAGACAT+AGG | 0.434303 | 7.3:-14136626 | MS.gene23458:CDS |
| CATTCCTTCTTAACAGAGTC+AGG | 0.435806 | 7.3:+14137400 | None:intergenic |
| TGCAACTCCTCCACCGCTAC+CGG | 0.435895 | 7.3:+14137639 | None:intergenic |
| TAAAATTGCAGAATCACTTA+AGG | 0.439016 | 7.3:-14136168 | MS.gene23458:CDS |
| ATAATAGAAGATGGAAAGAA+TGG | 0.440166 | 7.3:-14137064 | MS.gene23458:CDS |
| ATCCAATGTGGAAGGCAATA+GGG | 0.443972 | 7.3:-14137846 | MS.gene23458:CDS |
| AAAATCAAGTTCTTCGGAAA+GGG | 0.445304 | 7.3:-14137267 | MS.gene23458:CDS |
| AATGGTCAAAAGAAAACAAA+TGG | 0.451166 | 7.3:-14138372 | MS.gene23458:CDS |
| GATCAAAGAAGAAGAATTGG+AGG | 0.454354 | 7.3:-14136438 | MS.gene23458:CDS |
| AAATGCGATGCTGTCATTGT+TGG | 0.456225 | 7.3:-14137664 | MS.gene23458:CDS |
| GTATTAGTTCCATGGATCTC+AGG | 0.457639 | 7.3:-14136698 | MS.gene23458:CDS |
| ACCGAAGAAGAGGCCTCTCC+AGG | 0.458071 | 7.3:-14137794 | MS.gene23458:CDS |
| AGAACCAGAAGTTGTATAGA+AGG | 0.460921 | 7.3:+14139339 | None:intergenic |
| TAGCCCCAAGCAAATTGAAC+TGG | 0.461727 | 7.3:+14136860 | None:intergenic |
| CGACGGTAAAATGATGATCT+TGG | 0.462702 | 7.3:-14137479 | MS.gene23458:CDS |
| GCGGCGGGAGCTGTTGAGGT+TGG | 0.464809 | 7.3:-14136500 | MS.gene23458:CDS |
| GAGAAATTCATAATAGAAGA+TGG | 0.465338 | 7.3:-14137073 | MS.gene23458:CDS |
| CAAAATCAAGTTCTTCGGAA+AGG | 0.466408 | 7.3:-14137268 | MS.gene23458:CDS |
| TACCCTATTGCCTTCCACAT+TGG | 0.470515 | 7.3:+14137844 | None:intergenic |
| GTTGGTTCCGGTAGCGGTGG+AGG | 0.473180 | 7.3:-14137646 | MS.gene23458:CDS |
| TTGATGAGAATGGAGAAAGT+TGG | 0.475999 | 7.3:-14136292 | MS.gene23458:CDS |
| CAAATGGGAAGTTGTAGAAT+GGG | 0.480556 | 7.3:-14136338 | MS.gene23458:CDS |
| GTAGATTGAATGGTTACCAT+AGG | 0.483305 | 7.3:+14136209 | None:intergenic |
| CGCGGTCCAGAAGTGAACTT+TGG | 0.484300 | 7.3:-14136382 | MS.gene23458:CDS |
| GTCATTGTTGGTTCCGGTAG+CGG | 0.485398 | 7.3:-14137652 | MS.gene23458:CDS |
| ACTAATACTGAAAATGATCC+AGG | 0.486166 | 7.3:+14136713 | None:intergenic |
| TTGGTTGATGCTGTTGAAAA+CGG | 0.486532 | 7.3:-14137124 | MS.gene23458:CDS |
| TCAAATGGGAAGTTGTAGAA+TGG | 0.486816 | 7.3:-14136339 | MS.gene23458:CDS |
| ACAGTATGCTGTAGATTGAA+TGG | 0.487635 | 7.3:+14136199 | None:intergenic |
| TTCAAGGCCTTTCTCACTCA+GGG | 0.488063 | 7.3:+14137723 | None:intergenic |
| CATCCAGTTCAATTTGCTTG+GGG | 0.488374 | 7.3:-14136863 | MS.gene23458:CDS |
| ATCCAATCCCTGAGTGAGAA+AGG | 0.490284 | 7.3:-14137730 | MS.gene23458:CDS |
| TTTAGTTCTGCACATCAAAT+GGG | 0.491700 | 7.3:-14136353 | MS.gene23458:CDS |
| CTTCTATACTTTGTTCTCGA+GGG | 0.495918 | 7.3:-14138308 | MS.gene23458:intron |
| TCTTTGTTTAATGGAATGGA+TGG | 0.497110 | 7.3:+14139388 | None:intergenic |
| GGAGAAAGTTGGGAAGCAAA+AGG | 0.497184 | 7.3:-14136281 | MS.gene23458:CDS |
| TTGGTTAGAGACATAGGATC+AGG | 0.497758 | 7.3:-14136620 | MS.gene23458:CDS |
| TACAAAATCCAAACATTGGA+AGG | 0.499960 | 7.3:-14136898 | MS.gene23458:CDS |
| GAAAACATGACACACTTAAG+TGG | 0.500258 | 7.3:-14136830 | MS.gene23458:CDS |
| AAAGAACCTCATCAGGGAAT+GGG | 0.503886 | 7.3:+14139311 | None:intergenic |
| AACACCTGACTCTGTTAAGA+AGG | 0.504540 | 7.3:-14137404 | MS.gene23458:CDS |
| ACAAAGAGAAAGAATTGCTC+AGG | 0.508005 | 7.3:-14137040 | MS.gene23458:CDS |
| GATGCTGTCATTGTTGGTTC+CGG | 0.509168 | 7.3:-14137658 | MS.gene23458:CDS |
| CTCTGATTATCAATCTGCTA+TGG | 0.509218 | 7.3:-14137344 | MS.gene23458:CDS |
| GGAGGTAGACGAAAAGAGAA+AGG | 0.509307 | 7.3:-14139475 | MS.gene23458:CDS |
| TCAGGAGAAGTAAGAAGTGA+AGG | 0.509587 | 7.3:-14136602 | MS.gene23458:CDS |
| TCTTCTATACTTTGTTCTCG+AGG | 0.514200 | 7.3:-14138309 | MS.gene23458:CDS |
| TGCAGTTGGTGTTAACCCTA+TGG | 0.514783 | 7.3:-14136225 | MS.gene23458:CDS |
| ATTGAACTGGATGGAGATGA+AGG | 0.516885 | 7.3:+14136873 | None:intergenic |
| ATGGGTGAGAATGAAGAAGA+GGG | 0.517130 | 7.3:-14136320 | MS.gene23458:CDS |
| AAAAGTTGAAACCGAAGAAG+AGG | 0.517257 | 7.3:-14137804 | MS.gene23458:CDS |
| GAGAAAGTTGGGAAGCAAAA+GGG | 0.519118 | 7.3:-14136280 | MS.gene23458:CDS |
| TCAGTTCCCATTCCCTGATG+AGG | 0.520253 | 7.3:-14139317 | MS.gene23458:intron |
| TTGCTGCAGACAGATGTAGA+TGG | 0.521268 | 7.3:-14137874 | MS.gene23458:intron |
| AGTCCACTAGAAATCATTAG+AGG | 0.522212 | 7.3:+14136920 | None:intergenic |
| AACGGCGCAGTTATCCTCAC+TGG | 0.522905 | 7.3:-14137106 | MS.gene23458:CDS |
| AAAAGAACCTCATCAGGGAA+TGG | 0.523565 | 7.3:+14139310 | None:intergenic |
| CTTCAAGGCCTTTCTCACTC+AGG | 0.525253 | 7.3:+14137722 | None:intergenic |
| AATTGCTCAGGAGTGATAGC+TGG | 0.531778 | 7.3:-14137028 | MS.gene23458:CDS |
| GATTCAGTATGCAGAAGGAT+TGG | 0.536961 | 7.3:-14137322 | MS.gene23458:CDS |
| GGTAAAATGATGATCTTGGC+TGG | 0.539807 | 7.3:-14137475 | MS.gene23458:CDS |
| AAAAGGGTACTGACTCAACT+TGG | 0.540723 | 7.3:-14137147 | MS.gene23458:CDS |
| GGGTTAACACCAACTGCACT+AGG | 0.549107 | 7.3:+14136230 | None:intergenic |
| ATCTTGGCTGGCTCAACAGT+CGG | 0.554171 | 7.3:-14137463 | MS.gene23458:CDS |
| AAGCAACGCCATTGGTGAGG+TGG | 0.554657 | 7.3:-14138525 | MS.gene23458:CDS |
| AATGGGTGAGAATGAAGAAG+AGG | 0.555197 | 7.3:-14136321 | MS.gene23458:CDS |
| GGTTGCGGCGGGAGCTGTTG+AGG | 0.556378 | 7.3:-14136504 | MS.gene23458:CDS |
| AAAGAGAAAGGTTATAGCCA+TGG | 0.560705 | 7.3:-14139463 | MS.gene23458:CDS |
| GGACTACAAAATCCAAACAT+TGG | 0.561944 | 7.3:-14136902 | MS.gene23458:CDS |
| CTGACTCTGTTAAGAAGGAA+TGG | 0.564307 | 7.3:-14137399 | MS.gene23458:CDS |
| ATTGTTGGTTCCGGTAGCGG+TGG | 0.565231 | 7.3:-14137649 | MS.gene23458:CDS |
| GTTGGAACTTATAGGAGTGA+TGG | 0.565498 | 7.3:-14136482 | MS.gene23458:CDS |
| GCTGGCTCAACAGTCGGTGG+AGG | 0.567887 | 7.3:-14137457 | MS.gene23458:CDS |
| AAAGTAACTATTTCATCATG+TGG | 0.568702 | 7.3:-14136959 | MS.gene23458:CDS |
| TAGATTGAATGGTTACCATA+GGG | 0.569161 | 7.3:+14136210 | None:intergenic |
| GTTCATCGCTGAACTTTCCA+AGG | 0.572297 | 7.3:+14137537 | None:intergenic |
| TCTATTAGTCCTTCCTGGAG+AGG | 0.575506 | 7.3:+14137781 | None:intergenic |
| GTGGAAGGCAATAGGGTACA+AGG | 0.575769 | 7.3:-14137839 | MS.gene23458:CDS |
| TGCACCAGAAGCAACGCCAT+TGG | 0.577386 | 7.3:-14138533 | MS.gene23458:CDS |
| AATGATCCAGGTCCTAAAGC+AGG | 0.580745 | 7.3:+14136725 | None:intergenic |
| AAGTTGTATAGAAGGATGAG+AGG | 0.581610 | 7.3:+14139347 | None:intergenic |
| GCTGCAATTCTTGCAAACTC+AGG | 0.581743 | 7.3:-14137616 | MS.gene23458:CDS |
| CTATGGATTCAGTATGCAGA+AGG | 0.583898 | 7.3:-14137327 | MS.gene23458:CDS |
| GAAGCACCTGCTTTAGGACC+TGG | 0.586542 | 7.3:-14136731 | MS.gene23458:CDS |
| GGAGTTTCTTGATACTGTCA+CGG | 0.587716 | 7.3:-14136417 | MS.gene23458:CDS |
| TGGCTATAATCCAATGTGGA+AGG | 0.588681 | 7.3:-14137854 | MS.gene23458:CDS |
| GGGTACTGACTCAACTTGGT+TGG | 0.591888 | 7.3:-14137143 | MS.gene23458:CDS |
| ATATCGAGTCCTGAGATCCA+TGG | 0.595456 | 7.3:+14136689 | None:intergenic |
| GCTTCAGAAGATCATTATTG+CGG | 0.597873 | 7.3:-14137202 | MS.gene23458:CDS |
| GAGTGATAGCTGGAACAAGT+TGG | 0.601974 | 7.3:-14137018 | MS.gene23458:CDS |
| CATAGAATCCACCTCACCAA+TGG | 0.602414 | 7.3:+14138517 | None:intergenic |
| GATTCTCATCCTCTATTGAG+AGG | 0.604922 | 7.3:-14139496 | MS.gene23458:CDS |
| AAAGGGTTGTATGTGTGTGA+TGG | 0.608484 | 7.3:-14136263 | MS.gene23458:CDS |
| AAACAAATGGATACCTCTAA+GGG | 0.609941 | 7.3:-14138359 | MS.gene23458:CDS |
| CCCAAGCAAATTGAACTGGA+TGG | 0.610780 | 7.3:+14136864 | None:intergenic |
| GATACTGTCACGGTTGTCGG+TGG | 0.614491 | 7.3:-14136407 | MS.gene23458:CDS |
| ACTCGATATGAAAGACAGAA+TGG | 0.616506 | 7.3:-14136675 | MS.gene23458:CDS |
| AAGAAGAGGCCTCTCCAGGA+AGG | 0.616993 | 7.3:-14137790 | MS.gene23458:CDS |
| TGATAGCTGGAACAAGTTGG+AGG | 0.618232 | 7.3:-14137015 | MS.gene23458:CDS |
| TTGGCTGGCTCAACAGTCGG+TGG | 0.619706 | 7.3:-14137460 | MS.gene23458:CDS |
| CCTCCTCTAATGATTTCTAG+TGG | 0.623746 | 7.3:-14136923 | MS.gene23458:CDS |
| TGGAGGTACTGCTATAAACT+GGG | 0.626757 | 7.3:-14137440 | MS.gene23458:CDS |
| TTAAGTGGTAATAACCATGA+AGG | 0.627164 | 7.3:-14136815 | MS.gene23458:CDS |
| AACGAGCTTTATGAATCAGG+TGG | 0.631552 | 7.3:-14137517 | MS.gene23458:CDS |
| AGTGGTAATAACCATGAAGG+AGG | 0.637889 | 7.3:-14136812 | MS.gene23458:CDS |
| TAATCAGAGCTTGTGAAAAG+CGG | 0.638436 | 7.3:+14137358 | None:intergenic |
| CAGAAGCAACGCCATTGGTG+AGG | 0.639836 | 7.3:-14138528 | MS.gene23458:CDS |
| TCACGGTTGTCGGTGGACCG+CGG | 0.645745 | 7.3:-14136400 | MS.gene23458:CDS |
| CCACTAGAAATCATTAGAGG+AGG | 0.647396 | 7.3:+14136923 | None:intergenic |
| GGAATCATGCCAACTCTCGA+CGG | 0.650023 | 7.3:-14137496 | MS.gene23458:CDS |
| TCTCATCCTCTATTGAGAGG+AGG | 0.658446 | 7.3:-14139493 | MS.gene23458:CDS |
| AGCCAATACATGCATCTGAG+AGG | 0.679202 | 7.3:+14139432 | None:intergenic |
| CAAAGTTCACTTCTGGACCG+CGG | 0.689159 | 7.3:+14136383 | None:intergenic |
| CAAATGGATACCTCTAAGGG+CGG | 0.696692 | 7.3:-14138356 | MS.gene23458:CDS |
| TAGATGGCTATAATCCAATG+TGG | 0.704268 | 7.3:-14137858 | MS.gene23458:CDS |
| TGTGACAGATAAATGCAACA+AGG | 0.712817 | 7.3:-14137299 | MS.gene23458:CDS |
| TCTCAGCTCTACATCCAGTG+AGG | 0.723767 | 7.3:+14137092 | None:intergenic |
| GAAGGCAATAGGGTACAAGG+TGG | 0.747351 | 7.3:-14137836 | MS.gene23458:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATCATTTTTAATAAAAACAT+TGG | - | chr7.3:14137746-14137765 | MS.gene23458:CDS | 10.0% |
| !!! | TCATTTTTAATAAAAACATT+GGG | - | chr7.3:14137747-14137766 | MS.gene23458:CDS | 10.0% |
| !! | GATTAAAAAATGGATAAAAT+TGG | + | chr7.3:14136381-14136400 | None:intergenic | 15.0% |
| !! | GCATTATTAAAATGATAAAA+TGG | + | chr7.3:14137393-14137412 | None:intergenic | 15.0% |
| !!! | TTTTTTTTCATATGAGTATT+AGG | - | chr7.3:14137075-14137094 | MS.gene23458:CDS | 15.0% |
| !! | AAAATCTTAGAATTGGATTA+AGG | - | chr7.3:14139118-14139137 | MS.gene23458:intron | 20.0% |
| !! | AAATTGGTCATTTAAAGAAA+TGG | - | chr7.3:14137664-14137683 | MS.gene23458:CDS | 20.0% |
| !! | ATATGATCTACATACAAAAT+TGG | - | chr7.3:14137648-14137667 | MS.gene23458:CDS | 20.0% |
| !! | ATCTTTCATTAACATTTGAA+AGG | - | chr7.3:14136816-14136835 | MS.gene23458:CDS | 20.0% |
| !! | ATTATTGAACTAAACTAGTA+AGG | + | chr7.3:14137019-14137038 | None:intergenic | 20.0% |
| !!! | AGACTTTATTTATGTTCAAA+AGG | + | chr7.3:14136930-14136949 | None:intergenic | 20.0% |
| !!! | AGATTAGGCTTTTTTTTTAA+TGG | + | chr7.3:14136662-14136681 | None:intergenic | 20.0% |
| !!! | TCATTTTAATAATGCTCATA+TGG | - | chr7.3:14137398-14137417 | MS.gene23458:CDS | 20.0% |
| ! | AAAAAGCAAAACATGATGTT+TGG | + | chr7.3:14136896-14136915 | None:intergenic | 25.0% |
| ! | AAAATCCTGTATCAATGTTT+CGG | - | chr7.3:14136580-14136599 | MS.gene23458:CDS | 25.0% |
| ! | AAAGTAACTATTTCATCATG+TGG | - | chr7.3:14138703-14138722 | MS.gene23458:intron | 25.0% |
| ! | AATGGTCAAAAGAAAACAAA+TGG | - | chr7.3:14137290-14137309 | MS.gene23458:CDS | 25.0% |
| ! | ACATGATGAAATAGTTACTT+TGG | + | chr7.3:14138704-14138723 | None:intergenic | 25.0% |
| ! | ACTCATTGAATAACCTAAAA+TGG | + | chr7.3:14137481-14137500 | None:intergenic | 25.0% |
| ! | ATAATAGAAGATGGAAAGAA+TGG | - | chr7.3:14138598-14138617 | MS.gene23458:intron | 25.0% |
| ! | CTAAATATCAGTGAAAGATT+AGG | + | chr7.3:14136677-14136696 | None:intergenic | 25.0% |
| ! | CTCATTGAATAACCTAAAAT+GGG | + | chr7.3:14137480-14137499 | None:intergenic | 25.0% |
| ! | GACAAAAAATCAAATGTGAA+GGG | - | chr7.3:14139202-14139221 | MS.gene23458:intron | 25.0% |
| ! | GAGAAATTCATAATAGAAGA+TGG | - | chr7.3:14138589-14138608 | MS.gene23458:intron | 25.0% |
| ! | TAAAATTGCAGAATCACTTA+AGG | - | chr7.3:14139494-14139513 | MS.gene23458:CDS | 25.0% |
| ! | TATCTATCATGTCATATAAG+TGG | - | chr7.3:14136422-14136441 | MS.gene23458:CDS | 25.0% |
| ! | TCTTTCACTGATATTTAGAA+AGG | - | chr7.3:14136679-14136698 | MS.gene23458:CDS | 25.0% |
| ! | TTCTTATAGACTTGATCAAA+TGG | - | chr7.3:14139089-14139108 | MS.gene23458:intron | 25.0% |
| !! | AAGCGGTAGTTTATATTTTT+CGG | + | chr7.3:14138290-14138309 | None:intergenic | 25.0% |
| !! | TAGTTACTTTGGATTCTATT+TGG | + | chr7.3:14138693-14138712 | None:intergenic | 25.0% |
| !!! | AAGGAAGTCTTTAAGAATTT+TGG | - | chr7.3:14139137-14139156 | MS.gene23458:intron | 25.0% |
| !!! | GAGAAGAAATTTTCAAGAAA+TGG | - | chr7.3:14137272-14137291 | MS.gene23458:CDS | 25.0% |
| !!! | GATTTTCATCAGCTTTATAA+CGG | + | chr7.3:14137710-14137729 | None:intergenic | 25.0% |
| AAAACAAATGGATACCTCTA+AGG | - | chr7.3:14137302-14137321 | MS.gene23458:CDS | 30.0% | |
| AAAATCAAGTTCTTCGGAAA+GGG | - | chr7.3:14138395-14138414 | MS.gene23458:CDS | 30.0% | |
| AAACAAATGGATACCTCTAA+GGG | - | chr7.3:14137303-14137322 | MS.gene23458:CDS | 30.0% | |
| AAAGTGATCATCCTAGAAAA+AGG | - | chr7.3:14138073-14138092 | MS.gene23458:intron | 30.0% | |
| ACTAATACTGAAAATGATCC+AGG | + | chr7.3:14138952-14138971 | None:intergenic | 30.0% | |
| GACAGAGAAAATCTTAGAAT+TGG | - | chr7.3:14139111-14139130 | MS.gene23458:intron | 30.0% | |
| GCTTTCAAAATCAAGTTCTT+CGG | - | chr7.3:14138389-14138408 | MS.gene23458:CDS | 30.0% | |
| GGACAAAAAATCAAATGTGA+AGG | - | chr7.3:14139201-14139220 | MS.gene23458:intron | 30.0% | |
| GGATTCTGTCATTCAAATTA+GGG | - | chr7.3:14137167-14137186 | MS.gene23458:CDS | 30.0% | |
| GGATTGGATTAATGTAGAAT+TGG | + | chr7.3:14137921-14137940 | None:intergenic | 30.0% | |
| TAATGGAATGGATGGAAAAA+GGG | + | chr7.3:14136269-14136288 | None:intergenic | 30.0% | |
| TACAAAATCCAAACATTGGA+AGG | - | chr7.3:14138764-14138783 | MS.gene23458:intron | 30.0% | |
| TAGATTGAATGGTTACCATA+GGG | + | chr7.3:14139455-14139474 | None:intergenic | 30.0% | |
| TCAGAGAATTTGAGAACAAA+AGG | + | chr7.3:14137235-14137254 | None:intergenic | 30.0% | |
| TCTGTATCAGTATTTCATAG+TGG | - | chr7.3:14136610-14136629 | MS.gene23458:CDS | 30.0% | |
| TGGATTCTGTCATTCAAATT+AGG | - | chr7.3:14137166-14137185 | MS.gene23458:CDS | 30.0% | |
| TTAAGTGGTAATAACCATGA+AGG | - | chr7.3:14138847-14138866 | MS.gene23458:intron | 30.0% | |
| TTAATGGAATGGATGGAAAA+AGG | + | chr7.3:14136270-14136289 | None:intergenic | 30.0% | |
| TTCTCAAGATTATTCTTCCT+TGG | - | chr7.3:14138108-14138127 | MS.gene23458:intron | 30.0% | |
| TTTCACGGTTAAACCAAAAT+GGG | + | chr7.3:14137601-14137620 | None:intergenic | 30.0% | |
| ! | AACATTATGTCACCCATTTT+AGG | - | chr7.3:14137465-14137484 | MS.gene23458:CDS | 30.0% |
| ! | CAAAATACTCTCCTTTTTCT+AGG | + | chr7.3:14138087-14138106 | None:intergenic | 30.0% |
| ! | CATTTTCAGTATTAGTTCCA+TGG | - | chr7.3:14138956-14138975 | MS.gene23458:intron | 30.0% |
| ! | GACTTCTTTGTTTAATGGAA+TGG | + | chr7.3:14136281-14136300 | None:intergenic | 30.0% |
| ! | GGTGCTTCTATAATGATTTT+TGG | + | chr7.3:14138919-14138938 | None:intergenic | 30.0% |
| ! | TCTTTGTTTAATGGAATGGA+TGG | + | chr7.3:14136277-14136296 | None:intergenic | 30.0% |
| ! | TGAGAGACTTCTTTGTTTAA+TGG | + | chr7.3:14136286-14136305 | None:intergenic | 30.0% |
| ! | TTAAGTGTGTCATGTTTTCA+GGG | + | chr7.3:14138831-14138850 | None:intergenic | 30.0% |
| !! | CAAATTCTCTGAGATTTCTT+TGG | - | chr7.3:14137243-14137262 | MS.gene23458:CDS | 30.0% |
| !! | CCAGAAAAGTGTTTGAAAAA+GGG | - | chr7.3:14137525-14137544 | MS.gene23458:CDS | 30.0% |
| !! | TCCAGAAAAGTGTTTGAAAA+AGG | - | chr7.3:14137524-14137543 | MS.gene23458:CDS | 30.0% |
| !! | TGATGTTTGGTAACGAATTT+CGG | + | chr7.3:14136883-14136902 | None:intergenic | 30.0% |
| !! | TTTAGTTCTGCACATCAAAT+GGG | - | chr7.3:14139309-14139328 | MS.gene23458:intron | 30.0% |
| !!! | GTCTTTAAGAATTTTGGTTG+CGG | - | chr7.3:14139143-14139162 | MS.gene23458:intron | 30.0% |
| !!! | TTCTATAATGATTTTTGGCG+TGG | + | chr7.3:14138914-14138933 | None:intergenic | 30.0% |
| AAAAGTTGAAACCGAAGAAG+AGG | - | chr7.3:14137858-14137877 | MS.gene23458:CDS | 35.0% | |
| AAAGAGAAAGGTTATAGCCA+TGG | - | chr7.3:14136199-14136218 | MS.gene23458:CDS | 35.0% | |
| AAGTTATGATTCCTCCTTCA+TGG | + | chr7.3:14138864-14138883 | None:intergenic | 35.0% | |
| AAGTTGTATAGAAGGATGAG+AGG | + | chr7.3:14136318-14136337 | None:intergenic | 35.0% | |
| ACAAAGAGAAAGAATTGCTC+AGG | - | chr7.3:14138622-14138641 | MS.gene23458:intron | 35.0% | |
| ACAGTATGCTGTAGATTGAA+TGG | + | chr7.3:14139466-14139485 | None:intergenic | 35.0% | |
| ACTCGATATGAAAGACAGAA+TGG | - | chr7.3:14138987-14139006 | MS.gene23458:intron | 35.0% | |
| AGAACCAGAAGTTGTATAGA+AGG | + | chr7.3:14136326-14136345 | None:intergenic | 35.0% | |
| AGGGATCAAAGAAGAAGAAT+TGG | - | chr7.3:14139221-14139240 | MS.gene23458:intron | 35.0% | |
| AGTCCACTAGAAATCATTAG+AGG | + | chr7.3:14138745-14138764 | None:intergenic | 35.0% | |
| CAAAATCAAGTTCTTCGGAA+AGG | - | chr7.3:14138394-14138413 | MS.gene23458:CDS | 35.0% | |
| CAAATGGGAAGTTGTAGAAT+GGG | - | chr7.3:14139324-14139343 | MS.gene23458:CDS | 35.0% | |
| CTCTGATTATCAATCTGCTA+TGG | - | chr7.3:14138318-14138337 | MS.gene23458:CDS | 35.0% | |
| CTTCTATACTTTGTTCTCGA+GGG | - | chr7.3:14137354-14137373 | MS.gene23458:CDS | 35.0% | |
| GAAAACATGACACACTTAAG+TGG | - | chr7.3:14138832-14138851 | MS.gene23458:intron | 35.0% | |
| GATCAAAGAAGAAGAATTGG+AGG | - | chr7.3:14139224-14139243 | MS.gene23458:intron | 35.0% | |
| GCTTCAGAAGATCATTATTG+CGG | - | chr7.3:14138460-14138479 | MS.gene23458:CDS | 35.0% | |
| GGACTACAAAATCCAAACAT+TGG | - | chr7.3:14138760-14138779 | MS.gene23458:intron | 35.0% | |
| GTAGATTGAATGGTTACCAT+AGG | + | chr7.3:14139456-14139475 | None:intergenic | 35.0% | |
| GTTTCACGGTTAAACCAAAA+TGG | + | chr7.3:14137602-14137621 | None:intergenic | 35.0% | |
| TAATCAGAGCTTGTGAAAAG+CGG | + | chr7.3:14138307-14138326 | None:intergenic | 35.0% | |
| TAGATGGCTATAATCCAATG+TGG | - | chr7.3:14137804-14137823 | MS.gene23458:CDS | 35.0% | |
| TCAAATGGGAAGTTGTAGAA+TGG | - | chr7.3:14139323-14139342 | MS.gene23458:CDS | 35.0% | |
| TCACATGTTTACCAGTTTCA+CGG | + | chr7.3:14137616-14137635 | None:intergenic | 35.0% | |
| TCATCCTTCTATACAACTTC+TGG | - | chr7.3:14136319-14136338 | MS.gene23458:CDS | 35.0% | |
| TCTGAGAGGTTAAAAATCCA+TGG | + | chr7.3:14136219-14136238 | None:intergenic | 35.0% | |
| TCTTCTATACTTTGTTCTCG+AGG | - | chr7.3:14137353-14137372 | MS.gene23458:CDS | 35.0% | |
| TGATGAGAATGGAGAAAGTT+GGG | - | chr7.3:14139371-14139390 | MS.gene23458:CDS | 35.0% | |
| TGTAGAACCGGAGATAAAAA+GGG | - | chr7.3:14138499-14138518 | MS.gene23458:CDS | 35.0% | |
| TGTCTCTAACCAATGCAAAA+AGG | + | chr7.3:14139035-14139054 | None:intergenic | 35.0% | |
| TGTGACAGATAAATGCAACA+AGG | - | chr7.3:14138363-14138382 | MS.gene23458:CDS | 35.0% | |
| TTGATGAGAATGGAGAAAGT+TGG | - | chr7.3:14139370-14139389 | MS.gene23458:CDS | 35.0% | |
| TTGTAGAACCGGAGATAAAA+AGG | - | chr7.3:14138498-14138517 | MS.gene23458:CDS | 35.0% | |
| ! | AACTGCTAACCTTTTTGCAT+TGG | - | chr7.3:14139023-14139042 | MS.gene23458:intron | 35.0% |
| ! | ATGAACGAGCTTTATGAATC+AGG | - | chr7.3:14138142-14138161 | MS.gene23458:intron | 35.0% |
| ! | CTTAAGTGTGTCATGTTTTC+AGG | + | chr7.3:14138832-14138851 | None:intergenic | 35.0% |
| ! | TTGGTTGATGCTGTTGAAAA+CGG | - | chr7.3:14138538-14138557 | MS.gene23458:CDS | 35.0% |
| !! | ATTATAGAAGCACCTGCTTT+AGG | - | chr7.3:14138925-14138944 | MS.gene23458:intron | 35.0% |
| !! | GTTTAGTTCTGCACATCAAA+TGG | - | chr7.3:14139308-14139327 | MS.gene23458:intron | 35.0% |
| !! | TTTGCATTGGTTAGAGACAT+AGG | - | chr7.3:14139036-14139055 | MS.gene23458:intron | 35.0% |
| !!! | CCCTTTTTCAAACACTTTTC+TGG | + | chr7.3:14137528-14137547 | None:intergenic | 35.0% |
| !!! | TTAGGGACACTTTTTCTTTG+TGG | - | chr7.3:14137184-14137203 | MS.gene23458:CDS | 35.0% |
| !!! | TTTAAGAATTTTGGTTGCGG+CGG | - | chr7.3:14139146-14139165 | MS.gene23458:intron | 35.0% |
| !!! | TTTTGGTTTAACCGTGAAAC+TGG | - | chr7.3:14137602-14137621 | MS.gene23458:CDS | 35.0% |
| AAAAGAACCTCATCAGGGAA+TGG | + | chr7.3:14136355-14136374 | None:intergenic | 40.0% | |
| AAAGAACCTCATCAGGGAAT+GGG | + | chr7.3:14136354-14136373 | None:intergenic | 40.0% | |
| AAAGGGTTGTATGTGTGTGA+TGG | - | chr7.3:14139399-14139418 | MS.gene23458:CDS | 40.0% | |
| AAATGCGATGCTGTCATTGT+TGG | - | chr7.3:14137998-14138017 | MS.gene23458:intron | 40.0% | |
| AACACCTGACTCTGTTAAGA+AGG | - | chr7.3:14138258-14138277 | MS.gene23458:intron | 40.0% | |
| AACCTCTCAGATGCATGTAT+TGG | - | chr7.3:14136228-14136247 | MS.gene23458:CDS | 40.0% | |
| AACTACAACTGCTATGCAGT+CGG | - | chr7.3:14136702-14136721 | MS.gene23458:CDS | 40.0% | |
| AATCCAATGTGGAAGGCAAT+AGG | - | chr7.3:14137815-14137834 | MS.gene23458:CDS | 40.0% | |
| AATGGGTGAGAATGAAGAAG+AGG | - | chr7.3:14139341-14139360 | MS.gene23458:CDS | 40.0% | |
| ACAGGTATTCAACACATGTG+TGG | - | chr7.3:14136489-14136508 | MS.gene23458:CDS | 40.0% | |
| ACATCTGTCTGCAGCAATTA+GGG | + | chr7.3:14137785-14137804 | None:intergenic | 40.0% | |
| ACTGATACAGACACTGACAA+TGG | + | chr7.3:14136768-14136787 | None:intergenic | 40.0% | |
| AGTGGTAATAACCATGAAGG+AGG | - | chr7.3:14138850-14138869 | MS.gene23458:intron | 40.0% | |
| ATCCAATGTGGAAGGCAATA+GGG | - | chr7.3:14137816-14137835 | MS.gene23458:CDS | 40.0% | |
| ATGGGTGAGAATGAAGAAGA+GGG | - | chr7.3:14139342-14139361 | MS.gene23458:CDS | 40.0% | |
| ATTCAACACATGTGTGGTGT+TGG | - | chr7.3:14136495-14136514 | MS.gene23458:CDS | 40.0% | |
| ATTGAACTGGATGGAGATGA+AGG | + | chr7.3:14138792-14138811 | None:intergenic | 40.0% | |
| CATTCCTTCTTAACAGAGTC+AGG | + | chr7.3:14138265-14138284 | None:intergenic | 40.0% | |
| CATTGTCCAAAGTTCACTTC+TGG | + | chr7.3:14139289-14139308 | None:intergenic | 40.0% | |
| CCACTAGAAATCATTAGAGG+AGG | + | chr7.3:14138742-14138761 | None:intergenic | 40.0% | |
| CGACGGTAAAATGATGATCT+TGG | - | chr7.3:14138183-14138202 | MS.gene23458:intron | 40.0% | |
| CTATGGATTCAGTATGCAGA+AGG | - | chr7.3:14138335-14138354 | MS.gene23458:CDS | 40.0% | |
| CTGACTCTGTTAAGAAGGAA+TGG | - | chr7.3:14138263-14138282 | MS.gene23458:intron | 40.0% | |
| CTGTTGAGGTTGGAACTTAT+AGG | - | chr7.3:14139172-14139191 | MS.gene23458:intron | 40.0% | |
| CTTCATCTTCAGTGACTTCA+AGG | + | chr7.3:14137958-14137977 | None:intergenic | 40.0% | |
| GAGAAAGTTGGGAAGCAAAA+GGG | - | chr7.3:14139382-14139401 | MS.gene23458:CDS | 40.0% | |
| GATTCAGTATGCAGAAGGAT+TGG | - | chr7.3:14138340-14138359 | MS.gene23458:CDS | 40.0% | |
| GATTCTCATCCTCTATTGAG+AGG | - | chr7.3:14136166-14136185 | MS.gene23458:CDS | 40.0% | |
| GGAGTTTCTTGATACTGTCA+CGG | - | chr7.3:14139245-14139264 | MS.gene23458:intron | 40.0% | |
| GGTAAAATGATGATCTTGGC+TGG | - | chr7.3:14138187-14138206 | MS.gene23458:intron | 40.0% | |
| GGTGAAAAAGAACCTCATCA+GGG | + | chr7.3:14136360-14136379 | None:intergenic | 40.0% | |
| GTATTAGTTCCATGGATCTC+AGG | - | chr7.3:14138964-14138983 | MS.gene23458:intron | 40.0% | |
| GTCAAAAATGTCGATGCTAC+AGG | + | chr7.3:14136471-14136490 | None:intergenic | 40.0% | |
| GTTGGAACTTATAGGAGTGA+TGG | - | chr7.3:14139180-14139199 | MS.gene23458:intron | 40.0% | |
| TACATCTGTCTGCAGCAATT+AGG | + | chr7.3:14137786-14137805 | None:intergenic | 40.0% | |
| TCAGGAGAAGTAAGAAGTGA+AGG | - | chr7.3:14139060-14139079 | MS.gene23458:intron | 40.0% | |
| TGAAGGTTCCTTCCAATGTT+TGG | + | chr7.3:14138775-14138794 | None:intergenic | 40.0% | |
| TGGCTATAATCCAATGTGGA+AGG | - | chr7.3:14137808-14137827 | MS.gene23458:CDS | 40.0% | |
| TGGTGAAAAAGAACCTCATC+AGG | + | chr7.3:14136361-14136380 | None:intergenic | 40.0% | |
| TTGGTTAGAGACATAGGATC+AGG | - | chr7.3:14139042-14139061 | MS.gene23458:intron | 40.0% | |
| TTGTCTCTATTAGTCCTTCC+TGG | + | chr7.3:14137889-14137908 | None:intergenic | 40.0% | |
| ! | AACGAGCTTTATGAATCAGG+TGG | - | chr7.3:14138145-14138164 | MS.gene23458:intron | 40.0% |
| ! | ATCATTTTACCGTCGAGAGT+TGG | + | chr7.3:14138178-14138197 | None:intergenic | 40.0% |
| ! | CATCCAGTTCAATTTGCTTG+GGG | - | chr7.3:14138799-14138818 | MS.gene23458:intron | 40.0% |
| ! | CCATCCAGTTCAATTTGCTT+GGG | - | chr7.3:14138798-14138817 | MS.gene23458:intron | 40.0% |
| ! | CCTCCTCTAATGATTTCTAG+TGG | - | chr7.3:14138739-14138758 | MS.gene23458:intron | 40.0% |
| ! | GTCAGTACCCTTTTTATCTC+CGG | + | chr7.3:14138509-14138528 | None:intergenic | 40.0% |
| ! | TCCATCCAGTTCAATTTGCT+TGG | - | chr7.3:14138797-14138816 | MS.gene23458:intron | 40.0% |
| ! | TCGAAACACAGTTCCCATTT+TGG | - | chr7.3:14137585-14137604 | MS.gene23458:CDS | 40.0% |
| !! | AAAAGGGTACTGACTCAACT+TGG | - | chr7.3:14138515-14138534 | MS.gene23458:CDS | 40.0% |
| !! | TGGAAAAAGGGTGTCACATA+TGG | + | chr7.3:14136257-14136276 | None:intergenic | 40.0% |
| !! | TGGAGGTACTGCTATAAACT+GGG | - | chr7.3:14138222-14138241 | MS.gene23458:intron | 40.0% |
| !!! | CTTTTTTTCTGCAAGAGCAG+AGG | - | chr7.3:14136991-14137010 | MS.gene23458:CDS | 40.0% |
| !!! | GTAGCATCGACATTTTTGAC+AGG | - | chr7.3:14136471-14136490 | MS.gene23458:CDS | 40.0% |
| !!! | TTAAGAATTTTGGTTGCGGC+GGG | - | chr7.3:14139147-14139166 | MS.gene23458:intron | 40.0% |
| AACTGAAACTGCTGTGCAGT+CGG | - | chr7.3:14136839-14136858 | MS.gene23458:CDS | 45.0% | |
| AATGATCCAGGTCCTAAAGC+AGG | + | chr7.3:14138940-14138959 | None:intergenic | 45.0% | |
| AATTGCTCAGGAGTGATAGC+TGG | - | chr7.3:14138634-14138653 | MS.gene23458:intron | 45.0% | |
| AGCCAATACATGCATCTGAG+AGG | + | chr7.3:14136233-14136252 | None:intergenic | 45.0% | |
| ATATCGAGTCCTGAGATCCA+TGG | + | chr7.3:14138976-14138995 | None:intergenic | 45.0% | |
| ATCCAATCCCTGAGTGAGAA+AGG | - | chr7.3:14137932-14137951 | MS.gene23458:intron | 45.0% | |
| CATAGAATCCACCTCACCAA+TGG | + | chr7.3:14137148-14137167 | None:intergenic | 45.0% | |
| CATGTGTCAGTGTCATGTCT+CGG | + | chr7.3:14136525-14136544 | None:intergenic | 45.0% | |
| CCCAAGCAAATTGAACTGGA+TGG | + | chr7.3:14138801-14138820 | None:intergenic | 45.0% | |
| CGACACCGAAACATTGATAC+AGG | + | chr7.3:14136588-14136607 | None:intergenic | 45.0% | |
| CTCTTTGCTTGCATTGGAAG+TGG | - | chr7.3:14137209-14137228 | MS.gene23458:CDS | 45.0% | |
| CTTGATACTGTCACGGTTGT+CGG | - | chr7.3:14139252-14139271 | MS.gene23458:intron | 45.0% | |
| GAGTGATAGCTGGAACAAGT+TGG | - | chr7.3:14138644-14138663 | MS.gene23458:intron | 45.0% | |
| GCTGCAATTCTTGCAAACTC+AGG | - | chr7.3:14138046-14138065 | MS.gene23458:intron | 45.0% | |
| GGAGAAAGTTGGGAAGCAAA+AGG | - | chr7.3:14139381-14139400 | MS.gene23458:CDS | 45.0% | |
| GGAGGTAGACGAAAAGAGAA+AGG | - | chr7.3:14136187-14136206 | MS.gene23458:CDS | 45.0% | |
| GTGGAACTCTTTGCTTGCAT+TGG | - | chr7.3:14137203-14137222 | MS.gene23458:CDS | 45.0% | |
| GTTCATCGCTGAACTTTCCA+AGG | + | chr7.3:14138128-14138147 | None:intergenic | 45.0% | |
| TACCCTATTGCCTTCCACAT+TGG | + | chr7.3:14137821-14137840 | None:intergenic | 45.0% | |
| TAGCCCCAAGCAAATTGAAC+TGG | + | chr7.3:14138805-14138824 | None:intergenic | 45.0% | |
| TCTATTAGTCCTTCCTGGAG+AGG | + | chr7.3:14137884-14137903 | None:intergenic | 45.0% | |
| TCTCATCCTCTATTGAGAGG+AGG | - | chr7.3:14136169-14136188 | MS.gene23458:CDS | 45.0% | |
| TGCTGTTACGGTTGTAGAAC+CGG | - | chr7.3:14138487-14138506 | MS.gene23458:CDS | 45.0% | |
| TTCAAGGCCTTTCTCACTCA+GGG | + | chr7.3:14137942-14137961 | None:intergenic | 45.0% | |
| TTGCTGCAGACAGATGTAGA+TGG | - | chr7.3:14137788-14137807 | MS.gene23458:CDS | 45.0% | |
| ! | AGTGTTTTGCCTAGTGCAGT+TGG | - | chr7.3:14139423-14139442 | MS.gene23458:CDS | 45.0% |
| ! | CAAATGGATACCTCTAAGGG+CGG | - | chr7.3:14137306-14137325 | MS.gene23458:CDS | 45.0% |
| ! | CATTGGTGAGGTGGATTCTA+TGG | - | chr7.3:14137146-14137165 | MS.gene23458:CDS | 45.0% |
| ! | TATTGCGGTTCGTGCTGTTA+CGG | - | chr7.3:14138475-14138494 | MS.gene23458:CDS | 45.0% |
| ! | TGATAGCTGGAACAAGTTGG+AGG | - | chr7.3:14138647-14138666 | MS.gene23458:intron | 45.0% |
| !! | GATGCTGTCATTGTTGGTTC+CGG | - | chr7.3:14138004-14138023 | MS.gene23458:intron | 45.0% |
| !! | GTGGAGGTACTGCTATAAAC+TGG | - | chr7.3:14138221-14138240 | MS.gene23458:intron | 45.0% |
| !! | TGCAGTTGGTGTTAACCCTA+TGG | - | chr7.3:14139437-14139456 | MS.gene23458:CDS | 45.0% |
| !! | AAAAAAAATAGATTAAAAAA+TGG | + | chr7.3:14136391-14136410 | None:intergenic | 5.0% |
| AACACAAACACCGCCCTTAG+AGG | + | chr7.3:14137319-14137338 | None:intergenic | 50.0% | |
| AACTGCTATGCAGTCGGAGA+CGG | - | chr7.3:14136708-14136727 | MS.gene23458:CDS | 50.0% | |
| CAAAGTTCACTTCTGGACCG+CGG | + | chr7.3:14139282-14139301 | None:intergenic | 50.0% | |
| CGTCTACCTCCTCTCAATAG+AGG | + | chr7.3:14136178-14136197 | None:intergenic | 50.0% | |
| CTTCAAGGCCTTTCTCACTC+AGG | + | chr7.3:14137943-14137962 | None:intergenic | 50.0% | |
| GAAGGCAATAGGGTACAAGG+TGG | - | chr7.3:14137826-14137845 | MS.gene23458:CDS | 50.0% | |
| GGAATCATGCCAACTCTCGA+CGG | - | chr7.3:14138166-14138185 | MS.gene23458:intron | 50.0% | |
| GGGTTAACACCAACTGCACT+AGG | + | chr7.3:14139435-14139454 | None:intergenic | 50.0% | |
| GTGGAAGGCAATAGGGTACA+AGG | - | chr7.3:14137823-14137842 | MS.gene23458:CDS | 50.0% | |
| TCAGTTCCCATTCCCTGATG+AGG | - | chr7.3:14136345-14136364 | MS.gene23458:CDS | 50.0% | |
| TCTCAGCTCTACATCCAGTG+AGG | + | chr7.3:14138573-14138592 | None:intergenic | 50.0% | |
| ! | ATCTTGGCTGGCTCAACAGT+CGG | - | chr7.3:14138199-14138218 | MS.gene23458:intron | 50.0% |
| ! | CGGAAAGGGTGTGAGAGAAT+TGG | - | chr7.3:14138409-14138428 | MS.gene23458:CDS | 50.0% |
| !! | GAGGGTGCAGTTGATGAGAA+TGG | - | chr7.3:14139360-14139379 | MS.gene23458:CDS | 50.0% |
| !! | GGGTACTGACTCAACTTGGT+TGG | - | chr7.3:14138519-14138538 | MS.gene23458:CDS | 50.0% |
| !! | GTCATTGTTGGTTCCGGTAG+CGG | - | chr7.3:14138010-14138029 | MS.gene23458:intron | 50.0% |
| AACGGCGCAGTTATCCTCAC+TGG | - | chr7.3:14138556-14138575 | MS.gene23458:CDS | 55.0% | |
| AAGAAGAGGCCTCTCCAGGA+AGG | - | chr7.3:14137872-14137891 | MS.gene23458:intron | 55.0% | |
| AAGCAACGCCATTGGTGAGG+TGG | - | chr7.3:14137137-14137156 | MS.gene23458:CDS | 55.0% | |
| CAGAAGCAACGCCATTGGTG+AGG | - | chr7.3:14137134-14137153 | MS.gene23458:CDS | 55.0% | |
| CGCGGTCCAGAAGTGAACTT+TGG | - | chr7.3:14139280-14139299 | MS.gene23458:intron | 55.0% | |
| CTCACCAATGGCGTTGCTTC+TGG | + | chr7.3:14137136-14137155 | None:intergenic | 55.0% | |
| GATACTGTCACGGTTGTCGG+TGG | - | chr7.3:14139255-14139274 | MS.gene23458:intron | 55.0% | |
| GGCCTTTCTCACTCAGGGAT+TGG | + | chr7.3:14137937-14137956 | None:intergenic | 55.0% | |
| TCCTGGAGAGGCCTCTTCTT+CGG | + | chr7.3:14137872-14137891 | None:intergenic | 55.0% | |
| TGAAACTGCTGTGCAGTCGG+AGG | - | chr7.3:14136842-14136861 | MS.gene23458:CDS | 55.0% | |
| TGCACCAGAAGCAACGCCAT+TGG | - | chr7.3:14137129-14137148 | MS.gene23458:CDS | 55.0% | |
| !! | ATTGTTGGTTCCGGTAGCGG+TGG | - | chr7.3:14138013-14138032 | MS.gene23458:intron | 55.0% |
| !! | GAAGCACCTGCTTTAGGACC+TGG | - | chr7.3:14138931-14138950 | MS.gene23458:intron | 55.0% |
| ACCGAAGAAGAGGCCTCTCC+AGG | - | chr7.3:14137868-14137887 | MS.gene23458:CDS | 60.0% | |
| AGTCGGAGACGGCGTAGATG+TGG | - | chr7.3:14136719-14136738 | MS.gene23458:CDS | 60.0% | |
| TGCAACTCCTCCACCGCTAC+CGG | + | chr7.3:14138026-14138045 | None:intergenic | 60.0% | |
| ! | GTCGGAGGCGTAGGGACAAT+TGG | - | chr7.3:14136857-14136876 | MS.gene23458:CDS | 60.0% |
| ! | TTGGCTGGCTCAACAGTCGG+TGG | - | chr7.3:14138202-14138221 | MS.gene23458:intron | 60.0% |
| TCACGGTTGTCGGTGGACCG+CGG | - | chr7.3:14139262-14139281 | MS.gene23458:intron | 65.0% | |
| ! | GCTGGCTCAACAGTCGGTGG+AGG | - | chr7.3:14138205-14138224 | MS.gene23458:intron | 65.0% |
| ! | GCTGTGCAGTCGGAGGCGTA+GGG | - | chr7.3:14136849-14136868 | MS.gene23458:CDS | 65.0% |
| ! | GTTGGTTCCGGTAGCGGTGG+AGG | - | chr7.3:14138016-14138035 | MS.gene23458:intron | 65.0% |
| ! | TGCTGTGCAGTCGGAGGCGT+AGG | - | chr7.3:14136848-14136867 | MS.gene23458:CDS | 65.0% |
| GCGGCGGGAGCTGTTGAGGT+TGG | - | chr7.3:14139162-14139181 | MS.gene23458:intron | 70.0% | |
| GGTTGCGGCGGGAGCTGTTG+AGG | - | chr7.3:14139158-14139177 | MS.gene23458:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 14136160 | 14139524 | 14136160 | ID=MS.gene23458 |
| chr7.3 | mRNA | 14136160 | 14139524 | 14136160 | ID=MS.gene23458.t1;Parent=MS.gene23458 |
| chr7.3 | exon | 14139318 | 14139524 | 14139318 | ID=MS.gene23458.t1.exon1;Parent=MS.gene23458.t1 |
| chr7.3 | CDS | 14139318 | 14139524 | 14139318 | ID=cds.MS.gene23458.t1;Parent=MS.gene23458.t1 |
| chr7.3 | exon | 14138309 | 14138587 | 14138309 | ID=MS.gene23458.t1.exon2;Parent=MS.gene23458.t1 |
| chr7.3 | CDS | 14138309 | 14138587 | 14138309 | ID=cds.MS.gene23458.t1;Parent=MS.gene23458.t1 |
| chr7.3 | exon | 14136160 | 14137887 | 14136160 | ID=MS.gene23458.t1.exon3;Parent=MS.gene23458.t1 |
| chr7.3 | CDS | 14136160 | 14137887 | 14136160 | ID=cds.MS.gene23458.t1;Parent=MS.gene23458.t1 |
| Gene Sequence |
| Protein sequence |
