Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24382.t1 | XP_003589221.1 | 96.7 | 269 | 9 | 0 | 1 | 269 | 71 | 339 | 1.80E-149 | 538.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24382.t1 | G7I4F5 | 96.7 | 269 | 9 | 0 | 1 | 269 | 71 | 339 | 1.3e-149 | 538.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene24382 | 0.847877 | 8.76E-60 | -1.69E-46 |
| MS.gene049178 | MS.gene24382 | 0.818853 | 1.58E-52 | -1.69E-46 |
| MS.gene049350 | MS.gene24382 | 0.802564 | 5.29E-49 | -1.69E-46 |
| MS.gene051210 | MS.gene24382 | 0.827901 | 1.21E-54 | -1.69E-46 |
| MS.gene051247 | MS.gene24382 | 0.831819 | 1.34E-55 | -1.69E-46 |
| MS.gene051490 | MS.gene24382 | 0.800057 | 1.72E-48 | -1.69E-46 |
| MS.gene051700 | MS.gene24382 | 0.802332 | 5.90E-49 | -1.69E-46 |
| MS.gene052463 | MS.gene24382 | 0.808054 | 3.74E-50 | -1.69E-46 |
| MS.gene052609 | MS.gene24382 | 0.809267 | 2.06E-50 | -1.69E-46 |
| MS.gene052863 | MS.gene24382 | 0.802181 | 6.34E-49 | -1.69E-46 |
| MS.gene052896 | MS.gene24382 | 0.832151 | 1.11E-55 | -1.69E-46 |
| MS.gene053226 | MS.gene24382 | 0.816043 | 6.78E-52 | -1.69E-46 |
| MS.gene054472 | MS.gene24382 | 0.805225 | 1.48E-49 | -1.69E-46 |
| MS.gene05458 | MS.gene24382 | 0.808929 | 2.43E-50 | -1.69E-46 |
| MS.gene055311 | MS.gene24382 | 0.808652 | 2.79E-50 | -1.69E-46 |
| MS.gene055313 | MS.gene24382 | 0.830088 | 3.57E-55 | -1.69E-46 |
| MS.gene055465 | MS.gene24382 | 0.800404 | 1.46E-48 | -1.69E-46 |
| MS.gene055466 | MS.gene24382 | 0.802569 | 5.27E-49 | -1.69E-46 |
| MS.gene055468 | MS.gene24382 | 0.81109 | 8.33E-51 | -1.69E-46 |
| MS.gene055469 | MS.gene24382 | 0.811591 | 6.49E-51 | -1.69E-46 |
| MS.gene055513 | MS.gene24382 | 0.818029 | 2.43E-52 | -1.69E-46 |
| MS.gene055818 | MS.gene24382 | 0.803478 | 3.42E-49 | -1.69E-46 |
| MS.gene056174 | MS.gene24382 | 0.80008 | 1.70E-48 | -1.69E-46 |
| MS.gene056308 | MS.gene24382 | 0.824921 | 6.21E-54 | -1.69E-46 |
| MS.gene057360 | MS.gene24382 | 0.800263 | 1.56E-48 | -1.69E-46 |
| MS.gene057915 | MS.gene24382 | 0.852127 | 5.66E-61 | -1.69E-46 |
| MS.gene058636 | MS.gene24382 | 0.808872 | 2.50E-50 | -1.69E-46 |
| MS.gene058639 | MS.gene24382 | 0.801034 | 1.09E-48 | -1.69E-46 |
| MS.gene059170 | MS.gene24382 | 0.805446 | 1.33E-49 | -1.69E-46 |
| MS.gene059439 | MS.gene24382 | 0.813661 | 2.29E-51 | -1.69E-46 |
| MS.gene059713 | MS.gene24382 | 0.80096 | 1.13E-48 | -1.69E-46 |
| MS.gene059725 | MS.gene24382 | 0.824387 | 8.30E-54 | -1.69E-46 |
| MS.gene06052 | MS.gene24382 | 0.808851 | 2.53E-50 | -1.69E-46 |
| MS.gene060637 | MS.gene24382 | 0.820675 | 6.05E-53 | -1.69E-46 |
| MS.gene060803 | MS.gene24382 | 0.816244 | 6.11E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24382.t1 | MTR_1g019780 | 96.654 | 269 | 9 | 0 | 1 | 269 | 71 | 339 | 0.0 | 537 |
| MS.gene24382.t1 | MTR_3g101480 | 70.312 | 256 | 70 | 1 | 1 | 256 | 60 | 309 | 7.73e-132 | 376 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24382.t1 | AT4G33380 | 62.963 | 270 | 91 | 3 | 1 | 269 | 67 | 328 | 1.63e-116 | 337 |
| MS.gene24382.t1 | AT4G33380 | 62.222 | 270 | 91 | 4 | 1 | 269 | 67 | 326 | 2.47e-113 | 329 |
Find 71 sgRNAs with CRISPR-Local
Find 480 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATCAGCTGCACTATCTTTA+TGG | 0.210691 | 1.1:+3357048 | None:intergenic |
| GTTTACTGTCCGTCAGAATT+TGG | 0.251133 | 1.1:-3356960 | MS.gene24382:CDS |
| ATACAGAAGCAGTTGAAAAT+TGG | 0.252051 | 1.1:-3357720 | MS.gene24382:intron |
| AAAATTGGAAGAAGTTAAAT+TGG | 0.254431 | 1.1:-3357689 | MS.gene24382:CDS |
| ACCAGCGAAGTTAATGAAAT+TGG | 0.289670 | 1.1:-3362904 | MS.gene24382:intron |
| CCTGATGGTGCAGAGGATTT+AGG | 0.291489 | 1.1:-3357346 | MS.gene24382:intron |
| CCAGAGGAGGAAGTTCTTCC+AGG | 0.300552 | 1.1:-3357149 | MS.gene24382:intron |
| TGGAAGAATCGAATCGAATT+AGG | 0.327853 | 1.1:-3362938 | MS.gene24382:CDS |
| ATGACGGTTCTGCGGTTAGA+TGG | 0.328426 | 1.1:-3357082 | MS.gene24382:CDS |
| TTGAATAGCAGAAGCAATAA+TGG | 0.346033 | 1.1:-3362687 | MS.gene24382:CDS |
| CTATCCTTAAAATTTAGTTT+TGG | 0.353734 | 1.1:+3356253 | None:intergenic |
| TCATAATCTGTATGAAGTTC+AGG | 0.363566 | 1.1:+3357101 | None:intergenic |
| TAAAAGCTTTGGAGTCTGAT+TGG | 0.401742 | 1.1:-3357438 | MS.gene24382:CDS |
| TATCCAAAGGCCAATTTCTT+CGG | 0.402468 | 1.1:+3357405 | None:intergenic |
| GCTGTGCTTGCCGAAGAAAT+TGG | 0.403708 | 1.1:-3357415 | MS.gene24382:CDS |
| ACCAATTTCATTAACTTCGC+TGG | 0.413001 | 1.1:+3362903 | None:intergenic |
| ACCTGCCTCTTCGTGAGAAA+TGG | 0.421670 | 1.1:+3357639 | None:intergenic |
| TGTGAATTTCGATACCATTC+GGG | 0.422775 | 1.1:+3356226 | None:intergenic |
| TCTACATTCGCAACCTCAAC+AGG | 0.424607 | 1.1:+3357382 | None:intergenic |
| ATGTGAATTTCGATACCATT+CGG | 0.427345 | 1.1:+3356225 | None:intergenic |
| GTGATTGTTCCATGGGCCTC+TGG | 0.427846 | 1.1:-3356190 | MS.gene24382:CDS |
| AGGGATGCTAGTAAAAGCTT+TGG | 0.435482 | 1.1:-3357449 | MS.gene24382:CDS |
| TGATTGCTGTCAAGCTTGCT+TGG | 0.436458 | 1.1:-3357030 | MS.gene24382:CDS |
| TGTTTGTGCTGATAAATATC+TGG | 0.438090 | 1.1:+3356927 | None:intergenic |
| AAAAGCTTTGGAGTCTGATT+GGG | 0.441965 | 1.1:-3357437 | MS.gene24382:CDS |
| TGACGGTTCTGCGGTTAGAT+GGG | 0.442080 | 1.1:-3357081 | MS.gene24382:CDS |
| TCAGGTGGAAGGGCCCTGCC+TGG | 0.445771 | 1.1:+3357131 | None:intergenic |
| CCTAAATCCTCTGCACCATC+AGG | 0.447349 | 1.1:+3357346 | None:intergenic |
| CTGCACCAGTGATTGTTCCA+TGG | 0.458082 | 1.1:-3356198 | MS.gene24382:CDS |
| CTCGCTCCATAGCAATGCCT+TGG | 0.461557 | 1.1:+3362655 | None:intergenic |
| TATTTATCAGCACAAACATA+TGG | 0.462668 | 1.1:-3356922 | MS.gene24382:CDS |
| TGCACCAGTGATTGTTCCAT+GGG | 0.469487 | 1.1:-3356197 | MS.gene24382:CDS |
| GCAACTCAACCTCCGTACTT+TGG | 0.472261 | 1.1:+3362763 | None:intergenic |
| AGGAGGAAGTTCTTCCAGGC+AGG | 0.474177 | 1.1:-3357145 | MS.gene24382:CDS |
| TTGCCGAAGAAATTGGCCTT+TGG | 0.480285 | 1.1:-3357408 | MS.gene24382:CDS |
| CAGGTTTGCACTCAGGTGGA+AGG | 0.507192 | 1.1:+3357120 | None:intergenic |
| TTCGTGAGAAATGGTAGAGT+TGG | 0.509212 | 1.1:+3357648 | None:intergenic |
| TCGCTCCATAGCAATGCCTT+GGG | 0.512530 | 1.1:+3362656 | None:intergenic |
| ACCATTTCTCACGAAGAGGC+AGG | 0.512973 | 1.1:-3357640 | MS.gene24382:intron |
| AGCACAAACATATGGAATGC+TGG | 0.516650 | 1.1:-3356914 | MS.gene24382:CDS |
| AGGTTTGCACTCAGGTGGAA+GGG | 0.517485 | 1.1:+3357121 | None:intergenic |
| AAAAGGTGAAGGAATTAGAA+GGG | 0.517663 | 1.1:-3362797 | MS.gene24382:intron |
| TGAAGTTCAGGTTTGCACTC+AGG | 0.518943 | 1.1:+3357113 | None:intergenic |
| CTTCTTTGGCACGTTTAGCA+TGG | 0.526328 | 1.1:+3357006 | None:intergenic |
| CATGCTAAACGTGCCAAAGA+AGG | 0.528974 | 1.1:-3357005 | MS.gene24382:CDS |
| ATCTTCTGTTTCAAGTGCTG+AGG | 0.533874 | 1.1:+3362741 | None:intergenic |
| GAAGTTAAATTGGTTTCTGC+GGG | 0.545448 | 1.1:-3357679 | MS.gene24382:CDS |
| GGAACAATCACTGGTGCAGA+TGG | 0.546225 | 1.1:+3356202 | None:intergenic |
| GAGGCCCATGGAACAATCAC+TGG | 0.549857 | 1.1:+3356193 | None:intergenic |
| TCACTCCCAAGGCATTGCTA+TGG | 0.562744 | 1.1:-3362661 | MS.gene24382:CDS |
| GACGGTTCTGCGGTTAGATG+GGG | 0.565108 | 1.1:-3357080 | MS.gene24382:CDS |
| AGTTCAGGTTTGCACTCAGG+TGG | 0.566503 | 1.1:+3357116 | None:intergenic |
| AGAAGTTAAATTGGTTTCTG+CGG | 0.567216 | 1.1:-3357680 | MS.gene24382:CDS |
| TTAAATTGGTTTCTGCGGGA+AGG | 0.567960 | 1.1:-3357675 | MS.gene24382:CDS |
| CTCTACCATTTCTCACGAAG+AGG | 0.580109 | 1.1:-3357644 | MS.gene24382:CDS |
| GGAGGAAGTTCTTCCAGGCA+GGG | 0.592808 | 1.1:-3357144 | MS.gene24382:CDS |
| TGGCCTTTGGATACCTGTTG+AGG | 0.611467 | 1.1:-3357395 | MS.gene24382:CDS |
| AGCAGTTGAAAATTGGCGCA+AGG | 0.619149 | 1.1:-3357713 | MS.gene24382:CDS |
| GAACTTCATACAGATTATGA+CGG | 0.619220 | 1.1:-3357098 | MS.gene24382:CDS |
| GAATGACATCCAAATTCTGA+CGG | 0.620048 | 1.1:+3356951 | None:intergenic |
| AAAGGTGAAGGAATTAGAAG+GGG | 0.620122 | 1.1:-3362796 | MS.gene24382:intron |
| GCAACAACTCCAGAGGCCCA+TGG | 0.623742 | 1.1:+3356181 | None:intergenic |
| CAAGGCATTGCTATGGAGCG+AGG | 0.630111 | 1.1:-3362654 | MS.gene24382:intron |
| TGACAAACCTGATGGTGCAG+AGG | 0.630542 | 1.1:-3357353 | MS.gene24382:CDS |
| AATAATGGATCTCACTCCCA+AGG | 0.631172 | 1.1:-3362672 | MS.gene24382:CDS |
| TACAGATTATGACGGTTCTG+CGG | 0.638373 | 1.1:-3357090 | MS.gene24382:CDS |
| GAAACAGAAGATAATTGATG+AGG | 0.645919 | 1.1:-3362730 | MS.gene24382:CDS |
| CAACCTCAACAGGTATCCAA+AGG | 0.650329 | 1.1:+3357392 | None:intergenic |
| TTAAGGATAGGTATCCCGAA+TGG | 0.659919 | 1.1:-3356240 | MS.gene24382:CDS |
| TCAAGCAGCAACAACTCCAG+AGG | 0.687351 | 1.1:+3356174 | None:intergenic |
| GAACATAATGACAAACCTGA+TGG | 0.690687 | 1.1:-3357361 | MS.gene24382:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAAAAACTTTTTTTTTTTG+AGG | + | chr1.1:3362550-3362569 | None:intergenic | 10.0% |
| !! | AATAAAAATAAAGTGAAAGT+TGG | - | chr1.1:3360222-3360241 | MS.gene24382:intron | 15.0% |
| !! | TGAAAAAAAATGCAATATTT+GGG | - | chr1.1:3362131-3362150 | MS.gene24382:intron | 15.0% |
| !! | TTCTTTAAATCTTTACATAT+TGG | + | chr1.1:3361192-3361211 | None:intergenic | 15.0% |
| !! | TTTCATGATTTATTTATCTA+GGG | - | chr1.1:3360069-3360088 | MS.gene24382:intron | 15.0% |
| !!! | AATACAAAGATTAATTTTGA+TGG | + | chr1.1:3361926-3361945 | None:intergenic | 15.0% |
| !!! | ATTTATTCTGTTTTAATCTT+AGG | - | chr1.1:3360797-3360816 | MS.gene24382:intron | 15.0% |
| !!! | TATTTTTTTCTTTTGGATAT+AGG | - | chr1.1:3358391-3358410 | MS.gene24382:intron | 15.0% |
| !!! | TCAAAATTAATTAAGCATTT+TGG | + | chr1.1:3362685-3362704 | None:intergenic | 15.0% |
| !!! | TTTTCATGATTTATTTATCT+AGG | - | chr1.1:3360068-3360087 | MS.gene24382:intron | 15.0% |
| !! | AAAATTGGAAGAAGTTAAAT+TGG | - | chr1.1:3361424-3361443 | MS.gene24382:intron | 20.0% |
| !! | AAACATAAAAAAGAAGCTAA+AGG | + | chr1.1:3360758-3360777 | None:intergenic | 20.0% |
| !! | AAATCTCTTTCAAATTCTTA+GGG | - | chr1.1:3360597-3360616 | MS.gene24382:intron | 20.0% |
| !! | AACATAAAAAAGAAGCTAAA+GGG | + | chr1.1:3360757-3360776 | None:intergenic | 20.0% |
| !! | AATGAGATGTAACTTAATAA+AGG | + | chr1.1:3359750-3359769 | None:intergenic | 20.0% |
| !! | AGTTTAGTAAAATTGAAGTA+TGG | - | chr1.1:3358434-3358453 | MS.gene24382:intron | 20.0% |
| !! | CACATTGAATAGATATATTA+TGG | - | chr1.1:3358005-3358024 | MS.gene24382:intron | 20.0% |
| !! | CATAATATATCTATTCAATG+TGG | + | chr1.1:3358007-3358026 | None:intergenic | 20.0% |
| !! | CTAAACTATAATTCTGAATT+AGG | + | chr1.1:3359940-3359959 | None:intergenic | 20.0% |
| !! | GTGAAAAAAAATGCAATATT+TGG | - | chr1.1:3362130-3362149 | MS.gene24382:intron | 20.0% |
| !! | TCACTTTATATAACTTTGAA+AGG | - | chr1.1:3357856-3357875 | MS.gene24382:intron | 20.0% |
| !! | TGTGTATATTATAATCTTGT+AGG | - | chr1.1:3359472-3359491 | MS.gene24382:intron | 20.0% |
| !! | TTTATGTTTCAAGCATAAAT+TGG | - | chr1.1:3357614-3357633 | MS.gene24382:intron | 20.0% |
| !!! | CAAAACTAAATTTTAAGGAT+AGG | - | chr1.1:3362861-3362880 | MS.gene24382:intron | 20.0% |
| !!! | CTATCCTTAAAATTTAGTTT+TGG | + | chr1.1:3362863-3362882 | None:intergenic | 20.0% |
| !!! | CTTAGTTTGAAAACATTTTT+TGG | - | chr1.1:3358499-3358518 | MS.gene24382:intron | 20.0% |
| !!! | CTTTTCACCTTATTTTTTTT+TGG | - | chr1.1:3362368-3362387 | MS.gene24382:intron | 20.0% |
| !!! | GAAACCAAAACTAAATTTTA+AGG | - | chr1.1:3362856-3362875 | MS.gene24382:intron | 20.0% |
| !!! | GTTTCTTTTATAGTTTTTCT+AGG | + | chr1.1:3357003-3357022 | None:intergenic | 20.0% |
| !!! | TATATTTTAGTATGATGTGT+AGG | - | chr1.1:3359967-3359986 | MS.gene24382:intron | 20.0% |
| !!! | TTATATAACTTTGAAAGGAA+AGG | - | chr1.1:3357861-3357880 | MS.gene24382:intron | 20.0% |
| !!! | TTATCAAAACAATTGACTTT+GGG | - | chr1.1:3359235-3359254 | MS.gene24382:intron | 20.0% |
| ! | AAAAACTTGACACAACAAAT+GGG | - | chr1.1:3356587-3356606 | MS.gene24382:intron | 25.0% |
| ! | AAAATGAAGGAAAAAAAACG+AGG | - | chr1.1:3361057-3361076 | MS.gene24382:intron | 25.0% |
| ! | AAATGAAGGAAAAAAAACGA+GGG | - | chr1.1:3361058-3361077 | MS.gene24382:intron | 25.0% |
| ! | AATAAAGAGATGAAGATGTT+TGG | - | chr1.1:3356783-3356802 | MS.gene24382:intron | 25.0% |
| ! | AATATACCCAGAAAAAGTTT+AGG | + | chr1.1:3357825-3357844 | None:intergenic | 25.0% |
| ! | AGTAAGTGAGATTATTTACA+TGG | - | chr1.1:3360684-3360703 | MS.gene24382:intron | 25.0% |
| ! | ATGAATACTTTGTGTGAAAA+AGG | - | chr1.1:3356299-3356318 | MS.gene24382:intron | 25.0% |
| ! | CAACTTCTTAATTGAACATT+TGG | - | chr1.1:3360122-3360141 | MS.gene24382:intron | 25.0% |
| ! | CTCCTTCTAAATATGTTATT+GGG | - | chr1.1:3358127-3358146 | MS.gene24382:intron | 25.0% |
| ! | GAAATCTCTTTCAAATTCTT+AGG | - | chr1.1:3360596-3360615 | MS.gene24382:intron | 25.0% |
| ! | GACGAAAACAAAAAAATACA+CGG | + | chr1.1:3362763-3362782 | None:intergenic | 25.0% |
| ! | GCTGTTAAATTATGAAAGAT+GGG | - | chr1.1:3360300-3360319 | MS.gene24382:intron | 25.0% |
| ! | GTAATAGAAAGCTAAAACAT+TGG | + | chr1.1:3360852-3360871 | None:intergenic | 25.0% |
| ! | GTTCAATTATTCAAATGTCT+AGG | - | chr1.1:3357782-3357801 | MS.gene24382:intron | 25.0% |
| ! | GTTGATATCATCTAAGAATT+TGG | + | chr1.1:3358106-3358125 | None:intergenic | 25.0% |
| ! | TAAAAACTTGACACAACAAA+TGG | - | chr1.1:3356586-3356605 | MS.gene24382:intron | 25.0% |
| ! | TACAAAATGTTGTCAAATAG+TGG | + | chr1.1:3357228-3357247 | None:intergenic | 25.0% |
| ! | TATATAAAGTGATTCTCATG+AGG | + | chr1.1:3357848-3357867 | None:intergenic | 25.0% |
| ! | TATTTATCAGCACAAACATA+TGG | - | chr1.1:3362191-3362210 | MS.gene24382:intron | 25.0% |
| ! | TGAAAATATCATATCTAACC+TGG | - | chr1.1:3358523-3358542 | MS.gene24382:intron | 25.0% |
| ! | TGCTGTTAAATTATGAAAGA+TGG | - | chr1.1:3360299-3360318 | MS.gene24382:intron | 25.0% |
| ! | TGGTATATGATAGAACATTA+TGG | - | chr1.1:3357064-3357083 | MS.gene24382:CDS | 25.0% |
| ! | TGTAAATAATCTCACTTACT+AGG | + | chr1.1:3360684-3360703 | None:intergenic | 25.0% |
| ! | TGTAAGAGTTAAATTCAAGA+TGG | + | chr1.1:3359117-3359136 | None:intergenic | 25.0% |
| ! | TTAAATGTTGTGAACAAACA+TGG | + | chr1.1:3360179-3360198 | None:intergenic | 25.0% |
| ! | TTAAATTATGAAAGATGGGA+GGG | - | chr1.1:3360304-3360323 | MS.gene24382:intron | 25.0% |
| ! | TTAGTAAAATTGAAGTATGG+TGG | - | chr1.1:3358437-3358456 | MS.gene24382:intron | 25.0% |
| ! | TTGTAAAGCTTACGAAAATA+AGG | + | chr1.1:3362479-3362498 | None:intergenic | 25.0% |
| ! | TTGTTGTATACAACTATCTT+GGG | - | chr1.1:3358839-3358858 | MS.gene24382:intron | 25.0% |
| !! | AGTGAGTTGAAATAAATATC+AGG | + | chr1.1:3361635-3361654 | None:intergenic | 25.0% |
| !! | CTTATCAAAACAATTGACTT+TGG | - | chr1.1:3359234-3359253 | MS.gene24382:intron | 25.0% |
| !! | GTTTCCTCTTTTCTATATAA+AGG | - | chr1.1:3362254-3362273 | MS.gene24382:intron | 25.0% |
| !! | TATCAAAACAATTGACTTTG+GGG | - | chr1.1:3359236-3359255 | MS.gene24382:intron | 25.0% |
| !! | TGATTGCAATCTTATTTATC+TGG | - | chr1.1:3356747-3356766 | MS.gene24382:intron | 25.0% |
| !! | TTTGTTGTATACAACTATCT+TGG | - | chr1.1:3358838-3358857 | MS.gene24382:intron | 25.0% |
| !!! | GACATGTTTTTTTCTTTCTT+TGG | - | chr1.1:3357734-3357753 | MS.gene24382:intron | 25.0% |
| !!! | GCTTGAGTATTTTTTTCTTT+TGG | - | chr1.1:3358384-3358403 | MS.gene24382:intron | 25.0% |
| !!! | TCATTTTTGTGTTTAGTCTT+TGG | + | chr1.1:3359669-3359688 | None:intergenic | 25.0% |
| !!! | TCGTTTTTTTTCCTTCATTT+TGG | + | chr1.1:3361058-3361077 | None:intergenic | 25.0% |
| !!! | TGTTTTTTTCTTTCTTTGGA+TGG | - | chr1.1:3357738-3357757 | MS.gene24382:intron | 25.0% |
| !!! | TTCACCTTATTTTTTTTTGG+TGG | - | chr1.1:3362371-3362390 | MS.gene24382:intron | 25.0% |
| !!! | TTGCAAAATAGAAGTATCAA+AGG | + | chr1.1:3362709-3362728 | None:intergenic | 25.0% |
| !!! | TTTTTTCTTCTAGAGTAAAC+TGG | - | chr1.1:3357587-3357606 | MS.gene24382:intron | 25.0% |
| !!! | TTTTTTTCCATTCTCTGAAA+AGG | - | chr1.1:3359299-3359318 | MS.gene24382:intron | 25.0% |
| AAAAAGGTGAAGGAATTAGA+AGG | - | chr1.1:3356315-3356334 | MS.gene24382:intron | 30.0% | |
| AAAAGGTGAAGGAATTAGAA+GGG | - | chr1.1:3356316-3356335 | MS.gene24382:intron | 30.0% | |
| AAACAGTTACATAGCAATCA+TGG | + | chr1.1:3358809-3358828 | None:intergenic | 30.0% | |
| AAACTAGGCTTAGATGATTT+GGG | - | chr1.1:3356893-3356912 | MS.gene24382:intron | 30.0% | |
| AAAGAGGAAACATATTCATC+AGG | + | chr1.1:3362245-3362264 | None:intergenic | 30.0% | |
| AACAGTAATTCTGTGTAATC+TGG | - | chr1.1:3361340-3361359 | MS.gene24382:intron | 30.0% | |
| AACCTGGTATTAGTAATTGA+TGG | - | chr1.1:3358539-3358558 | MS.gene24382:intron | 30.0% | |
| AAGAGGAAACATATTCATCA+GGG | + | chr1.1:3362244-3362263 | None:intergenic | 30.0% | |
| AAGGAATATAGAAGATCTTC+CGG | + | chr1.1:3361118-3361137 | None:intergenic | 30.0% | |
| AAGGGACAAAAGTAAATATG+GGG | - | chr1.1:3358460-3358479 | MS.gene24382:intron | 30.0% | |
| AATCACGCTTACATCAAATT+GGG | + | chr1.1:3358945-3358964 | None:intergenic | 30.0% | |
| ACAACATTCTATGATTAAGG+TGG | - | chr1.1:3358717-3358736 | MS.gene24382:intron | 30.0% | |
| ACCAATAAGTGTATATTAGC+TGG | + | chr1.1:3362818-3362837 | None:intergenic | 30.0% | |
| ACCAATGCATAAAATATGCA+AGG | + | chr1.1:3362419-3362438 | None:intergenic | 30.0% | |
| ACCTATAGTAAAAACGATTG+TGG | - | chr1.1:3356870-3356889 | MS.gene24382:intron | 30.0% | |
| AGACATCATGATATTAAGCA+AGG | - | chr1.1:3357346-3357365 | MS.gene24382:intron | 30.0% | |
| AGATCTAGAGATTAATGAGT+TGG | - | chr1.1:3357032-3357051 | MS.gene24382:CDS | 30.0% | |
| AGGTCCTTTATATAGAAAAG+AGG | + | chr1.1:3362261-3362280 | None:intergenic | 30.0% | |
| AGTTCATAGTGAACAAAATG+GGG | + | chr1.1:3358567-3358586 | None:intergenic | 30.0% | |
| ATAAAAGCTGTGAATCACTT+CGG | - | chr1.1:3358650-3358669 | MS.gene24382:intron | 30.0% | |
| ATACAGAAGCAGTTGAAAAT+TGG | - | chr1.1:3361393-3361412 | MS.gene24382:intron | 30.0% | |
| ATAGCATTAAAGAGAGAGTT+GGG | - | chr1.1:3356841-3356860 | MS.gene24382:intron | 30.0% | |
| ATGTGAATTTCGATACCATT+CGG | + | chr1.1:3362891-3362910 | None:intergenic | 30.0% | |
| CAAAAGTAAATATGGGGTTA+TGG | - | chr1.1:3358466-3358485 | MS.gene24382:intron | 30.0% | |
| CAACATTCTATGATTAAGGT+GGG | - | chr1.1:3358718-3358737 | MS.gene24382:intron | 30.0% | |
| CTCACAACATTCTATGATTA+AGG | - | chr1.1:3358714-3358733 | MS.gene24382:intron | 30.0% | |
| CTTACGAAAATAAGGTGAAA+AGG | + | chr1.1:3362471-3362490 | None:intergenic | 30.0% | |
| GAAACAGAAGATAATTGATG+AGG | - | chr1.1:3356383-3356402 | MS.gene24382:intron | 30.0% | |
| GAACTTCATACAGATTATGA+CGG | - | chr1.1:3362015-3362034 | MS.gene24382:intron | 30.0% | |
| GAAGGGACAAAAGTAAATAT+GGG | - | chr1.1:3358459-3358478 | MS.gene24382:intron | 30.0% | |
| GACATTTGAATAATTGAACC+AGG | + | chr1.1:3357781-3357800 | None:intergenic | 30.0% | |
| GACCCAATAACATATTTAGA+AGG | + | chr1.1:3358132-3358151 | None:intergenic | 30.0% | |
| GACTAATAGTTGCAAAAGAT+GGG | + | chr1.1:3361282-3361301 | None:intergenic | 30.0% | |
| GACTGGACATTAAAAAAACT+AGG | + | chr1.1:3360364-3360383 | None:intergenic | 30.0% | |
| GAGTTCATAGTGAACAAAAT+GGG | + | chr1.1:3358568-3358587 | None:intergenic | 30.0% | |
| GCTCCTTCTAAATATGTTAT+TGG | - | chr1.1:3358126-3358145 | MS.gene24382:intron | 30.0% | |
| GTGTTAGACCAACAAAAAAA+AGG | - | chr1.1:3361139-3361158 | MS.gene24382:intron | 30.0% | |
| GTTAAATTATGAAAGATGGG+AGG | - | chr1.1:3360303-3360322 | MS.gene24382:intron | 30.0% | |
| TAAAAACGATTGTGGAAACT+AGG | - | chr1.1:3356878-3356897 | MS.gene24382:intron | 30.0% | |
| TAAAGATCAATGTGCTCTTA+AGG | + | chr1.1:3357430-3357449 | None:intergenic | 30.0% | |
| TAAATTATGAAAGATGGGAG+GGG | - | chr1.1:3360305-3360324 | MS.gene24382:intron | 30.0% | |
| TAAGAAAGGTGAATCTTGAA+TGG | - | chr1.1:3359077-3359096 | MS.gene24382:intron | 30.0% | |
| TAATCACGCTTACATCAAAT+TGG | + | chr1.1:3358946-3358965 | None:intergenic | 30.0% | |
| TAATCTCACTTACTAGGAAA+AGG | + | chr1.1:3360678-3360697 | None:intergenic | 30.0% | |
| TACCATCAATTACTAATACC+AGG | + | chr1.1:3358544-3358563 | None:intergenic | 30.0% | |
| TCAACTCACTATTACTACTA+GGG | - | chr1.1:3361645-3361664 | MS.gene24382:intron | 30.0% | |
| TCATAATCTGTATGAAGTTC+AGG | + | chr1.1:3362015-3362034 | None:intergenic | 30.0% | |
| TCATAGAATGTTGTGAGTAT+TGG | + | chr1.1:3358711-3358730 | None:intergenic | 30.0% | |
| TCCAGCTAATATACACTTAT+TGG | - | chr1.1:3362814-3362833 | MS.gene24382:intron | 30.0% | |
| TCTCAGTGTTAAATCATAGA+AGG | + | chr1.1:3356527-3356546 | None:intergenic | 30.0% | |
| TCTCTACGTAAAATTCAAGT+TGG | + | chr1.1:3356697-3356716 | None:intergenic | 30.0% | |
| TGACTAATAGTTGCAAAAGA+TGG | + | chr1.1:3361283-3361302 | None:intergenic | 30.0% | |
| TGAGTTCATAGTGAACAAAA+TGG | + | chr1.1:3358569-3358588 | None:intergenic | 30.0% | |
| TGGTCAACAAGTCTATAAAT+TGG | - | chr1.1:3359715-3359734 | MS.gene24382:intron | 30.0% | |
| TGTAGACCAACAAATGTATA+TGG | - | chr1.1:3360274-3360293 | MS.gene24382:intron | 30.0% | |
| TGTCTTAGAGTTTGATCTTT+AGG | + | chr1.1:3358362-3358381 | None:intergenic | 30.0% | |
| TTCAACTCACTATTACTACT+AGG | - | chr1.1:3361644-3361663 | MS.gene24382:intron | 30.0% | |
| TTCAGAACATGGAAAAAAAC+AGG | + | chr1.1:3358156-3358175 | None:intergenic | 30.0% | |
| TTGAATAGCAGAAGCAATAA+TGG | - | chr1.1:3356426-3356445 | MS.gene24382:intron | 30.0% | |
| TTGTACTAAATAGCATATCG+CGG | - | chr1.1:3357243-3357262 | MS.gene24382:intron | 30.0% | |
| ! | AAAATTGAAGTATGGTGGAA+GGG | - | chr1.1:3358442-3358461 | MS.gene24382:intron | 30.0% |
| ! | ACCTTGCATATTTTATGCAT+TGG | - | chr1.1:3362415-3362434 | MS.gene24382:intron | 30.0% |
| ! | ACCTTTTTCTCATTGCTTAT+GGG | - | chr1.1:3359912-3359931 | MS.gene24382:intron | 30.0% |
| ! | AGAAGTTAAATTGGTTTCTG+CGG | - | chr1.1:3361433-3361452 | MS.gene24382:intron | 30.0% |
| ! | ATCAAAACAATTGACTTTGG+GGG | - | chr1.1:3359237-3359256 | MS.gene24382:intron | 30.0% |
| ! | GTTGGATCTATCATTTCTTT+TGG | - | chr1.1:3360402-3360421 | MS.gene24382:intron | 30.0% |
| ! | TAAAATTGAAGTATGGTGGA+AGG | - | chr1.1:3358441-3358460 | MS.gene24382:intron | 30.0% |
| ! | TAATGAGTTGGATGGAAATA+TGG | - | chr1.1:3357044-3357063 | MS.gene24382:CDS | 30.0% |
| ! | TCAAGTTGTTCAAGTAAGAA+AGG | - | chr1.1:3359063-3359082 | MS.gene24382:intron | 30.0% |
| ! | TGTTTGTGCTGATAAATATC+TGG | + | chr1.1:3362189-3362208 | None:intergenic | 30.0% |
| ! | TTTTGTTCACTATGAACTCA+AGG | - | chr1.1:3358569-3358588 | MS.gene24382:intron | 30.0% |
| !! | AAAGATCAAACTCTAAGACA+TGG | - | chr1.1:3358362-3358381 | MS.gene24382:intron | 30.0% |
| !! | ATTTATAGACTTGTTGACCA+TGG | + | chr1.1:3359715-3359734 | None:intergenic | 30.0% |
| !! | GATTGACCTAAACTTTTTCT+GGG | - | chr1.1:3357816-3357835 | MS.gene24382:intron | 30.0% |
| !! | TATAGGTTTTAGTAGAAGTG+TGG | - | chr1.1:3358408-3358427 | MS.gene24382:intron | 30.0% |
| !! | TCCACAATCGTTTTTACTAT+AGG | + | chr1.1:3356874-3356893 | None:intergenic | 30.0% |
| !! | TGATTGACCTAAACTTTTTC+TGG | - | chr1.1:3357815-3357834 | MS.gene24382:intron | 30.0% |
| !! | TTGTTGTGATAGTTGTTTTC+TGG | - | chr1.1:3361847-3361866 | MS.gene24382:intron | 30.0% |
| !! | TTTTTCAGACCTAATAACCA+TGG | + | chr1.1:3357479-3357498 | None:intergenic | 30.0% |
| !! | TTTTTGTTGGTCTAACACAA+AGG | + | chr1.1:3361137-3361156 | None:intergenic | 30.0% |
| !!! | ACCTTATTTTTTTTTGGTGG+TGG | - | chr1.1:3362374-3362393 | MS.gene24382:intron | 30.0% |
| !!! | GCATTTTTTTTCACCTTCTT+TGG | + | chr1.1:3362124-3362143 | None:intergenic | 30.0% |
| !!! | GTGTCAAGTTTTTAGCTTAA+CGG | + | chr1.1:3356580-3356599 | None:intergenic | 30.0% |
| !!! | TGGATGGTATTGATTGATTT+TGG | - | chr1.1:3357754-3357773 | MS.gene24382:intron | 30.0% |
| !!! | TTGGGATTCCTTTTTTTTGT+TGG | + | chr1.1:3361150-3361169 | None:intergenic | 30.0% |
| AAAAAAATACACGGTCGTGA+AGG | + | chr1.1:3362754-3362773 | None:intergenic | 35.0% | |
| AAAAAACGAGGGTTCAAAGT+TGG | - | chr1.1:3361069-3361088 | MS.gene24382:intron | 35.0% | |
| AAAAACGAGGGTTCAAAGTT+GGG | - | chr1.1:3361070-3361089 | MS.gene24382:intron | 35.0% | |
| AAAGAGATGAAGATGTTTGG+TGG | - | chr1.1:3356786-3356805 | MS.gene24382:intron | 35.0% | |
| AAAGGTGAAGGAATTAGAAG+GGG | - | chr1.1:3356317-3356336 | MS.gene24382:intron | 35.0% | |
| AAATTATGAAAGATGGGAGG+GGG | - | chr1.1:3360306-3360325 | MS.gene24382:intron | 35.0% | |
| AAATTGGCGCAAGGAAAAAT+TGG | - | chr1.1:3361409-3361428 | MS.gene24382:intron | 35.0% | |
| AAGAGATGAAGATGTTTGGT+GGG | - | chr1.1:3356787-3356806 | MS.gene24382:intron | 35.0% | |
| AAGTAAATATGGGGTTATGG+AGG | - | chr1.1:3358469-3358488 | MS.gene24382:intron | 35.0% | |
| AAGTCCCAAATCAAACCATA+TGG | - | chr1.1:3359617-3359636 | MS.gene24382:intron | 35.0% | |
| AATCAGCTGCACTATCTTTA+TGG | + | chr1.1:3362068-3362087 | None:intergenic | 35.0% | |
| ACAGTGGTGAATCTATGTTT+GGG | + | chr1.1:3359789-3359808 | None:intergenic | 35.0% | |
| ACCAATTTCATTAACTTCGC+TGG | + | chr1.1:3356213-3356232 | None:intergenic | 35.0% | |
| ACCAGCGAAGTTAATGAAAT+TGG | - | chr1.1:3356209-3356228 | MS.gene24382:CDS | 35.0% | |
| ACCCATAAGCAATGAGAAAA+AGG | + | chr1.1:3359916-3359935 | None:intergenic | 35.0% | |
| ACTTTGTGTGAAAAAGGTGA+AGG | - | chr1.1:3356305-3356324 | MS.gene24382:intron | 35.0% | |
| AGCATGCCATATACATTTGT+TGG | + | chr1.1:3360283-3360302 | None:intergenic | 35.0% | |
| AGGAAAGGAAACAATGATAC+GGG | + | chr1.1:3360498-3360517 | None:intergenic | 35.0% | |
| AGTCCCAAATCAAACCATAT+GGG | - | chr1.1:3359618-3359637 | MS.gene24382:intron | 35.0% | |
| ATCACGCTTACATCAAATTG+GGG | + | chr1.1:3358944-3358963 | None:intergenic | 35.0% | |
| ATCTCATTATTAGCTAACGG+GGG | + | chr1.1:3360948-3360967 | None:intergenic | 35.0% | |
| ATGCTAGTGGAAGCAAATAT+AGG | + | chr1.1:3358980-3358999 | None:intergenic | 35.0% | |
| CAACAAATGGGAATATGAGA+TGG | - | chr1.1:3356599-3356618 | MS.gene24382:intron | 35.0% | |
| CACTATGAACTCAAGGAATA+TGG | - | chr1.1:3358576-3358595 | MS.gene24382:intron | 35.0% | |
| CATAGCAATCATGGTAAACA+AGG | + | chr1.1:3358800-3358819 | None:intergenic | 35.0% | |
| CATATTCTAACACACGATAC+AGG | + | chr1.1:3361884-3361903 | None:intergenic | 35.0% | |
| CATCTATTCTGAACTGGATT+TGG | - | chr1.1:3359586-3359605 | MS.gene24382:intron | 35.0% | |
| CATCTCATTATTAGCTAACG+GGG | + | chr1.1:3360949-3360968 | None:intergenic | 35.0% | |
| CCAATAAGTGTATACTAGCT+AGG | + | chr1.1:3362785-3362804 | None:intergenic | 35.0% | |
| CCATCTCATTATTAGCTAAC+GGG | + | chr1.1:3360950-3360969 | None:intergenic | 35.0% | |
| CCTAGCTAGTATACACTTAT+TGG | - | chr1.1:3362782-3362801 | MS.gene24382:CDS | 35.0% | |
| CCTTTCACAAATCAGTAACA+CGG | + | chr1.1:3360032-3360051 | None:intergenic | 35.0% | |
| CTCGTTCTAACGCAAAAATT+TGG | + | chr1.1:3361258-3361277 | None:intergenic | 35.0% | |
| CTGTATCGTGTGTTAGAATA+TGG | - | chr1.1:3361882-3361901 | MS.gene24382:intron | 35.0% | |
| CTTATTGGTATTCTGAATCC+AGG | - | chr1.1:3362797-3362816 | MS.gene24382:intron | 35.0% | |
| GAAAACGTGATGAATCACTT+CGG | + | chr1.1:3359821-3359840 | None:intergenic | 35.0% | |
| GAAACTAGGCTTAGATGATT+TGG | - | chr1.1:3356892-3356911 | MS.gene24382:intron | 35.0% | |
| GAACATAATGACAAACCTGA+TGG | - | chr1.1:3361752-3361771 | MS.gene24382:intron | 35.0% | |
| GAATATGAGATGGTTTGACT+TGG | - | chr1.1:3356609-3356628 | MS.gene24382:intron | 35.0% | |
| GAATGACATCCAAATTCTGA+CGG | + | chr1.1:3362165-3362184 | None:intergenic | 35.0% | |
| GAGGAAAGGAAACAATGATA+CGG | + | chr1.1:3360499-3360518 | None:intergenic | 35.0% | |
| GATAGCATTAAAGAGAGAGT+TGG | - | chr1.1:3356840-3356859 | MS.gene24382:intron | 35.0% | |
| GCCACCACCAAAAAAAAATA+AGG | + | chr1.1:3362378-3362397 | None:intergenic | 35.0% | |
| GCCATCTCATTATTAGCTAA+CGG | + | chr1.1:3360951-3360970 | None:intergenic | 35.0% | |
| GGAAGGGACAAAAGTAAATA+TGG | - | chr1.1:3358458-3358477 | MS.gene24382:intron | 35.0% | |
| GTGTTGTCAATTGTAGATAG+CGG | - | chr1.1:3357158-3357177 | MS.gene24382:intron | 35.0% | |
| TAAAAGGTTATCCACCAACA+AGG | + | chr1.1:3359515-3359534 | None:intergenic | 35.0% | |
| TAAAGGAATTGTGTGAGGAA+AGG | + | chr1.1:3360513-3360532 | None:intergenic | 35.0% | |
| TAGCATTAAAGAGAGAGTTG+GGG | - | chr1.1:3356842-3356861 | MS.gene24382:intron | 35.0% | |
| TATCCAAAGGCCAATTTCTT+CGG | + | chr1.1:3361711-3361730 | None:intergenic | 35.0% | |
| TCTCATCCTTAGAGATAAAC+TGG | - | chr1.1:3359139-3359158 | MS.gene24382:intron | 35.0% | |
| TGCATAAAATATGCAAGGTC+CGG | + | chr1.1:3362414-3362433 | None:intergenic | 35.0% | |
| TGCTAGTGGAAGCAAATATA+GGG | + | chr1.1:3358979-3358998 | None:intergenic | 35.0% | |
| TGGAAGAATCGAATCGAATT+AGG | - | chr1.1:3356175-3356194 | MS.gene24382:CDS | 35.0% | |
| TGGTTTACATTTACAGTCAC+CGG | - | chr1.1:3361096-3361115 | MS.gene24382:intron | 35.0% | |
| TGTGAATTTCGATACCATTC+GGG | + | chr1.1:3362890-3362909 | None:intergenic | 35.0% | |
| TTCTATATAAAGGACCTGCT+TGG | - | chr1.1:3362264-3362283 | MS.gene24382:intron | 35.0% | |
| TTGTAAGTTGTAACACCCAA+AGG | + | chr1.1:3360637-3360656 | None:intergenic | 35.0% | |
| ! | ACATAGTTTTCCTCCTATTC+AGG | + | chr1.1:3358767-3358786 | None:intergenic | 35.0% |
| ! | ACATGATCGATTTCATCTGT+AGG | - | chr1.1:3356645-3356664 | MS.gene24382:intron | 35.0% |
| ! | ACTCCCATATGGTTTGATTT+GGG | + | chr1.1:3359624-3359643 | None:intergenic | 35.0% |
| ! | AGTTGCTTTGTGTATGTCTT+AGG | - | chr1.1:3357644-3357663 | MS.gene24382:CDS | 35.0% |
| ! | ATCAGTGTTGTTAAATAGCG+CGG | + | chr1.1:3357317-3357336 | None:intergenic | 35.0% |
| ! | CAAATTTTTGCGTTAGAACG+AGG | - | chr1.1:3361256-3361275 | MS.gene24382:intron | 35.0% |
| ! | CACCTTTTTCTCATTGCTTA+TGG | - | chr1.1:3359911-3359930 | MS.gene24382:intron | 35.0% |
| ! | CATGTATCCTTTTCAGAGAA+TGG | + | chr1.1:3359309-3359328 | None:intergenic | 35.0% |
| ! | CATGTCTAGAACCAAAATGA+AGG | - | chr1.1:3361044-3361063 | MS.gene24382:intron | 35.0% |
| ! | CTAGAGATTAATGAGTTGGA+TGG | - | chr1.1:3357036-3357055 | MS.gene24382:CDS | 35.0% |
| ! | CTTTTGGCGTTTACAAAGTA+AGG | - | chr1.1:3360418-3360437 | MS.gene24382:intron | 35.0% |
| ! | GAAGTTAAATTGGTTTCTGC+GGG | - | chr1.1:3361434-3361453 | MS.gene24382:intron | 35.0% |
| ! | GAGGATTTAGGTAATCGTTT+TGG | - | chr1.1:3361779-3361798 | MS.gene24382:intron | 35.0% |
| ! | GTTGCTTTGTGTATGTCTTA+GGG | - | chr1.1:3357645-3357664 | MS.gene24382:CDS | 35.0% |
| ! | TAATGCAACTTTTGAACCTC+TGG | + | chr1.1:3359167-3359186 | None:intergenic | 35.0% |
| ! | TTAATGTAGCTGTTACTTGC+TGG | - | chr1.1:3357552-3357571 | MS.gene24382:intron | 35.0% |
| ! | TTCCACTAGCATTGAAGTTA+TGG | - | chr1.1:3358988-3359007 | MS.gene24382:intron | 35.0% |
| !! | AAAAGCTTTGGAGTCTGATT+GGG | - | chr1.1:3361676-3361695 | MS.gene24382:intron | 35.0% |
| !! | ATATTCAAAAGAGAGCATCG+TGG | - | chr1.1:3360994-3361013 | MS.gene24382:intron | 35.0% |
| !! | CAATTTTGTGGTGTTGAGTT+AGG | - | chr1.1:3358072-3358091 | MS.gene24382:intron | 35.0% |
| !! | GTAATCAGTTGTTGTTTACG+TGG | - | chr1.1:3356248-3356267 | MS.gene24382:CDS | 35.0% |
| !! | TAAAAGCTTTGGAGTCTGAT+TGG | - | chr1.1:3361675-3361694 | MS.gene24382:intron | 35.0% |
| !! | TTGTAGATAGCGGAAAATAC+TGG | - | chr1.1:3357168-3357187 | MS.gene24382:intron | 35.0% |
| !!! | GTATTGATTGATTTTGGTCC+TGG | - | chr1.1:3357760-3357779 | MS.gene24382:intron | 35.0% |
| !!! | TATTTTTTTTTGGTGGTGGC+CGG | - | chr1.1:3362378-3362397 | MS.gene24382:intron | 35.0% |
| !!! | TGAGTATTGGAATGTTTTGC+AGG | + | chr1.1:3358698-3358717 | None:intergenic | 35.0% |
| AAGCAAGACTGGCATCTAAA+AGG | + | chr1.1:3359531-3359550 | None:intergenic | 40.0% | |
| AATAACCATGGATCAGTACG+CGG | + | chr1.1:3357467-3357486 | None:intergenic | 40.0% | |
| ACAAATGCAATCGTAAGGTG+CGG | + | chr1.1:3358325-3358344 | None:intergenic | 40.0% | |
| ACACCACAAAATTGATCGTG+AGG | + | chr1.1:3358066-3358085 | None:intergenic | 40.0% | |
| ACCTTACGATTGCATTTGTG+GGG | - | chr1.1:3358326-3358345 | MS.gene24382:intron | 40.0% | |
| ACTGGATAACTCAACACAAG+GGG | - | chr1.1:3359420-3359439 | MS.gene24382:intron | 40.0% | |
| ACTTCGGAATAGGATGATGA+CGG | - | chr1.1:3358666-3358685 | MS.gene24382:intron | 40.0% | |
| AGAATGAGATGCACCTGAAT+AGG | - | chr1.1:3358751-3358770 | MS.gene24382:intron | 40.0% | |
| AGAGTTGTCCTTATATGGCT+CGG | - | chr1.1:3358030-3358049 | MS.gene24382:intron | 40.0% | |
| AGCACAAACATATGGAATGC+TGG | - | chr1.1:3362199-3362218 | MS.gene24382:intron | 40.0% | |
| AGCATTAAAGAGAGAGTTGG+GGG | - | chr1.1:3356843-3356862 | MS.gene24382:intron | 40.0% | |
| AGCTTCAACTTGTGTGATGT+AGG | + | chr1.1:3359022-3359041 | None:intergenic | 40.0% | |
| AGGAGAGTAGATCAGATGTA+GGG | - | chr1.1:3356949-3356968 | MS.gene24382:CDS | 40.0% | |
| AGGGATGCTAGTAAAAGCTT+TGG | - | chr1.1:3361664-3361683 | MS.gene24382:intron | 40.0% | |
| ATACAACTATCTTGGGCTTG+AGG | - | chr1.1:3358846-3358865 | MS.gene24382:intron | 40.0% | |
| ATGAAGCTTGTGTGTTTGCA+TGG | - | chr1.1:3361565-3361584 | MS.gene24382:intron | 40.0% | |
| ATTGAGCTGTTTATCCAAGC+AGG | - | chr1.1:3362658-3362677 | MS.gene24382:CDS | 40.0% | |
| CACCTTACGATTGCATTTGT+GGG | - | chr1.1:3358325-3358344 | MS.gene24382:intron | 40.0% | |
| CACTGGATAACTCAACACAA+GGG | - | chr1.1:3359419-3359438 | MS.gene24382:intron | 40.0% | |
| CACTTACTAGGAAAAGGCTT+TGG | + | chr1.1:3360672-3360691 | None:intergenic | 40.0% | |
| CATAAAATATGCAAGGTCCG+GGG | + | chr1.1:3362412-3362431 | None:intergenic | 40.0% | |
| CCCGTTAGCTAATAATGAGA+TGG | - | chr1.1:3360947-3360966 | MS.gene24382:intron | 40.0% | |
| CTGTATCTGATCTCATCTAG+CGG | - | chr1.1:3361813-3361832 | MS.gene24382:intron | 40.0% | |
| CTGTGTATACATTTCTCCAG+AGG | - | chr1.1:3361948-3361967 | MS.gene24382:intron | 40.0% | |
| GAAAAAGTCCAATCCTCCAA+GGG | + | chr1.1:3357404-3357423 | None:intergenic | 40.0% | |
| GACAGTGGTGAATCTATGTT+TGG | + | chr1.1:3359790-3359809 | None:intergenic | 40.0% | |
| GACTCCCATATGGTTTGATT+TGG | + | chr1.1:3359625-3359644 | None:intergenic | 40.0% | |
| GAGAGAGTAAATCACAGTGA+TGG | + | chr1.1:3359858-3359877 | None:intergenic | 40.0% | |
| GAGTACAGCGATTATGAAAC+AGG | + | chr1.1:3360559-3360578 | None:intergenic | 40.0% | |
| GAGTTATCCAGTGGTCTATT+TGG | + | chr1.1:3359412-3359431 | None:intergenic | 40.0% | |
| GATCAATGTGCTCTTAAGGA+CGG | + | chr1.1:3357426-3357445 | None:intergenic | 40.0% | |
| GATTTCAGCATGTCTCGAAT+TGG | + | chr1.1:3358245-3358264 | None:intergenic | 40.0% | |
| GCATAAAATATGCAAGGTCC+GGG | + | chr1.1:3362413-3362432 | None:intergenic | 40.0% | |
| GGCAATGGTTGATCAATTGA+AGG | - | chr1.1:3358607-3358626 | MS.gene24382:intron | 40.0% | |
| GTAAATAAGCCAATCCAAGC+AGG | + | chr1.1:3362281-3362300 | None:intergenic | 40.0% | |
| GTATCCACACAAACACCTTT+GGG | - | chr1.1:3360619-3360638 | MS.gene24382:intron | 40.0% | |
| GTTTACTGTCCGTCAGAATT+TGG | - | chr1.1:3362153-3362172 | MS.gene24382:intron | 40.0% | |
| TACAGATTATGACGGTTCTG+CGG | - | chr1.1:3362023-3362042 | MS.gene24382:intron | 40.0% | |
| TAGACCTTGAGTAACCTTGT+TGG | - | chr1.1:3359498-3359517 | MS.gene24382:intron | 40.0% | |
| TAGGGTAGTCAAATCACTAG+AGG | - | chr1.1:3356967-3356986 | MS.gene24382:CDS | 40.0% | |
| TATAAAGGACCTGCTTGGAT+TGG | - | chr1.1:3362269-3362288 | MS.gene24382:intron | 40.0% | |
| TCAAGGAATATGGAGAGAGA+GGG | - | chr1.1:3358586-3358605 | MS.gene24382:intron | 40.0% | |
| TCACGCTTACATCAAATTGG+GGG | + | chr1.1:3358943-3358962 | None:intergenic | 40.0% | |
| TCGACTAGAGTCTAGAGATA+TGG | - | chr1.1:3358270-3358289 | MS.gene24382:intron | 40.0% | |
| TCGATTTCATCTGTAGGAGA+TGG | - | chr1.1:3356651-3356670 | MS.gene24382:intron | 40.0% | |
| TGCCATAACTTCAATGCTAG+TGG | + | chr1.1:3358993-3359012 | None:intergenic | 40.0% | |
| TGGTAAAATCGACAGTTCAC+TGG | - | chr1.1:3356671-3356690 | MS.gene24382:intron | 40.0% | |
| TGGTGAATCTATGTTTGGGT+GGG | + | chr1.1:3359785-3359804 | None:intergenic | 40.0% | |
| TGTATACATTTCTCCAGAGG+AGG | - | chr1.1:3361951-3361970 | MS.gene24382:intron | 40.0% | |
| TGTATCTGATCTCATCTAGC+GGG | - | chr1.1:3361814-3361833 | MS.gene24382:intron | 40.0% | |
| TGTTGAAATCCACACGCTAA+AGG | + | chr1.1:3360530-3360549 | None:intergenic | 40.0% | |
| TTAAGGATAGGTATCCCGAA+TGG | - | chr1.1:3362873-3362892 | MS.gene24382:intron | 40.0% | |
| TTAATGTGACCATTGACCCT+TGG | - | chr1.1:3357385-3357404 | MS.gene24382:CDS | 40.0% | |
| TTCGTGAGAAATGGTAGAGT+TGG | + | chr1.1:3361468-3361487 | None:intergenic | 40.0% | |
| ! | AAGATGTTTGGTGGGATGTT+TGG | - | chr1.1:3356795-3356814 | MS.gene24382:intron | 40.0% |
| ! | ACTCCCATGTGGTTTGATTT+GGG | - | chr1.1:3358882-3358901 | MS.gene24382:intron | 40.0% |
| ! | ATCTTCTGTTTCAAGTGCTG+AGG | + | chr1.1:3356375-3356394 | None:intergenic | 40.0% |
| ! | CAAGTCTTATCCCACTAAGT+CGG | + | chr1.1:3357114-3357133 | None:intergenic | 40.0% |
| ! | CATCTATTCTGGACTAGATC+TGG | + | chr1.1:3358920-3358939 | None:intergenic | 40.0% |
| ! | CGTACTGATCCATGGTTATT+AGG | - | chr1.1:3357467-3357486 | MS.gene24382:intron | 40.0% |
| ! | GATCTTGTCTCATGCTTTTG+AGG | + | chr1.1:3359345-3359364 | None:intergenic | 40.0% |
| ! | TAAGACTTGGTTGTCGTTGT+TGG | - | chr1.1:3357125-3357144 | MS.gene24382:CDS | 40.0% |
| ! | TCACCTCACGATCAATTTTG+TGG | - | chr1.1:3358060-3358079 | MS.gene24382:intron | 40.0% |
| ! | TCTGGAATGTGAACAAATGC+AGG | + | chr1.1:3358219-3358238 | None:intergenic | 40.0% |
| ! | TTAAATTGGTTTCTGCGGGA+AGG | - | chr1.1:3361438-3361457 | MS.gene24382:intron | 40.0% |
| ! | TTAAGCATTTTGGACCTGCT+TGG | + | chr1.1:3362675-3362694 | None:intergenic | 40.0% |
| ! | TTACTAGGAAAAGGCTTTGG+TGG | + | chr1.1:3360669-3360688 | None:intergenic | 40.0% |
| !! | AATAATGGATCTCACTCCCA+AGG | - | chr1.1:3356441-3356460 | MS.gene24382:intron | 40.0% |
| !! | AGAGAGGTGTTGAAACATAG+CGG | + | chr1.1:3357292-3357311 | None:intergenic | 40.0% |
| !! | CACAGTGATGGATCAATGAA+AGG | + | chr1.1:3359846-3359865 | None:intergenic | 40.0% |
| !! | CCGTGTTACTGATTTGTGAA+AGG | - | chr1.1:3360029-3360048 | MS.gene24382:intron | 40.0% |
| !! | GCTATCATTTTTATCCCGTC+TGG | + | chr1.1:3356826-3356845 | None:intergenic | 40.0% |
| !! | GCTTGGATTGGCTTATTTAC+TGG | - | chr1.1:3362281-3362300 | MS.gene24382:intron | 40.0% |
| !! | GGAGTTTTCAAGCCAAAGTA+CGG | - | chr1.1:3356338-3356357 | MS.gene24382:intron | 40.0% |
| !! | TGAGAGCATCTATTCTGAAC+TGG | - | chr1.1:3359580-3359599 | MS.gene24382:intron | 40.0% |
| !! | TGGTTTGATTTGGGCCTTTA+GGG | - | chr1.1:3358891-3358910 | MS.gene24382:intron | 40.0% |
| !!! | ATTTTTTTTTGGTGGTGGCC+GGG | - | chr1.1:3362379-3362398 | MS.gene24382:intron | 40.0% |
| !!! | GTCTCATGCTTTTGAGGTAA+GGG | + | chr1.1:3359339-3359358 | None:intergenic | 40.0% |
| !!! | TCTCATGCTTTTGAGGTAAG+GGG | + | chr1.1:3359338-3359357 | None:intergenic | 40.0% |
| !!! | TGTCTCATGCTTTTGAGGTA+AGG | + | chr1.1:3359340-3359359 | None:intergenic | 40.0% |
| !!! | TTAGTTTTGGTTTCTCTGCC+TGG | + | chr1.1:3362850-3362869 | None:intergenic | 40.0% |
| AACGTCCAATCCTAAGTGTG+GGG | - | chr1.1:3358174-3358193 | MS.gene24382:intron | 45.0% | |
| AAGGCCCAAATCAAACCACA+TGG | + | chr1.1:3358889-3358908 | None:intergenic | 45.0% | |
| AATAGTGGCTATAGCACTGC+TGG | + | chr1.1:3357213-3357232 | None:intergenic | 45.0% | |
| AATATGGAGAGAGAGGGCAA+TGG | - | chr1.1:3358592-3358611 | MS.gene24382:intron | 45.0% | |
| ACATTAGGAGGACTCCCATA+TGG | + | chr1.1:3359635-3359654 | None:intergenic | 45.0% | |
| ACCCCACAAATGCAATCGTA+AGG | + | chr1.1:3358330-3358349 | None:intergenic | 45.0% | |
| ACCTTGAGTAACCTTGTTGG+TGG | - | chr1.1:3359501-3359520 | MS.gene24382:intron | 45.0% | |
| ACTCTCTGATTGGGACTTCT+TGG | - | chr1.1:3359269-3359288 | MS.gene24382:intron | 45.0% | |
| AGCAGTTGAAAATTGGCGCA+AGG | - | chr1.1:3361400-3361419 | MS.gene24382:intron | 45.0% | |
| AGCTGACTGATAAGCAAGAC+TGG | + | chr1.1:3359542-3359561 | None:intergenic | 45.0% | |
| AGGATTGGACGTTCAGAACA+TGG | + | chr1.1:3358167-3358186 | None:intergenic | 45.0% | |
| AGGCCCAAATCAAACCACAT+GGG | + | chr1.1:3358888-3358907 | None:intergenic | 45.0% | |
| AGTCAAATCACTAGAGGCAG+AGG | - | chr1.1:3356973-3356992 | MS.gene24382:CDS | 45.0% | |
| ATAACTCAACACAAGGGGCA+AGG | - | chr1.1:3359425-3359444 | MS.gene24382:intron | 45.0% | |
| ATAGTGGCTATAGCACTGCT+GGG | + | chr1.1:3357212-3357231 | None:intergenic | 45.0% | |
| ATATGGGAGTCCTCCTAATG+TGG | - | chr1.1:3359634-3359653 | MS.gene24382:intron | 45.0% | |
| ATCAGTACGCGGCAGAATAA+GGG | + | chr1.1:3357456-3357475 | None:intergenic | 45.0% | |
| ATGACTACCCGAGCCATATA+AGG | + | chr1.1:3358041-3358060 | None:intergenic | 45.0% | |
| ATGAGATGCACCTGAATAGG+AGG | - | chr1.1:3358754-3358773 | MS.gene24382:intron | 45.0% | |
| CAACCTCAACAGGTATCCAA+AGG | + | chr1.1:3361724-3361743 | None:intergenic | 45.0% | |
| CACACAATTCCTTTAGCGTG+TGG | - | chr1.1:3360518-3360537 | MS.gene24382:intron | 45.0% | |
| CACCTATGGATACTCTAGTC+AGG | - | chr1.1:3356929-3356948 | MS.gene24382:CDS | 45.0% | |
| CACGCTAAAGGAATTGTGTG+AGG | + | chr1.1:3360518-3360537 | None:intergenic | 45.0% | |
| CAGGAGAGTAGATCAGATGT+AGG | - | chr1.1:3356948-3356967 | MS.gene24382:CDS | 45.0% | |
| CATCTGCTCACTCTCTGATT+GGG | - | chr1.1:3359260-3359279 | MS.gene24382:intron | 45.0% | |
| CATGCTAAACGTGCCAAAGA+AGG | - | chr1.1:3362108-3362127 | MS.gene24382:intron | 45.0% | |
| CATGTCTCGAATTGGACATC+TGG | + | chr1.1:3358237-3358256 | None:intergenic | 45.0% | |
| CATTATTAGCTAACGGGGGT+TGG | + | chr1.1:3360944-3360963 | None:intergenic | 45.0% | |
| CATTTGGTATGTGGGTCCAA+CGG | - | chr1.1:3359386-3359405 | MS.gene24382:intron | 45.0% | |
| CCACTGGATAACTCAACACA+AGG | - | chr1.1:3359418-3359437 | MS.gene24382:intron | 45.0% | |
| CCTTGTGTTGAGTTATCCAG+TGG | + | chr1.1:3359421-3359440 | None:intergenic | 45.0% | |
| CGACCTTGCATTTGGTATGT+GGG | - | chr1.1:3359378-3359397 | MS.gene24382:intron | 45.0% | |
| CGACTTAGTGGGATAAGACT+TGG | - | chr1.1:3357112-3357131 | MS.gene24382:CDS | 45.0% | |
| CTCAAGGAATATGGAGAGAG+AGG | - | chr1.1:3358585-3358604 | MS.gene24382:intron | 45.0% | |
| CTCTACCATTTCTCACGAAG+AGG | - | chr1.1:3361469-3361488 | MS.gene24382:intron | 45.0% | |
| CTGGCTCCAGTTTATCTCTA+AGG | + | chr1.1:3359148-3359167 | None:intergenic | 45.0% | |
| CTTATCCCACTAAGTCGGAT+CGG | + | chr1.1:3357109-3357128 | None:intergenic | 45.0% | |
| CTTCTTTGGCACGTTTAGCA+TGG | + | chr1.1:3362110-3362129 | None:intergenic | 45.0% | |
| GAACGTCCAATCCTAAGTGT+GGG | - | chr1.1:3358173-3358192 | MS.gene24382:intron | 45.0% | |
| GACACGTTACATAGCAACCA+TGG | - | chr1.1:3359695-3359714 | MS.gene24382:intron | 45.0% | |
| GACTCCCATGTGGTTTGATT+TGG | - | chr1.1:3358881-3358900 | MS.gene24382:intron | 45.0% | |
| GAGAGACACGCTATAATGCA+AGG | - | chr1.1:3360905-3360924 | MS.gene24382:intron | 45.0% | |
| GAGCCATATAAGGACAACTC+TGG | + | chr1.1:3358031-3358050 | None:intergenic | 45.0% | |
| GAGTTGTCCTTATATGGCTC+GGG | - | chr1.1:3358031-3358050 | MS.gene24382:intron | 45.0% | |
| GATAGATCCAACAGTCCAGA+TGG | + | chr1.1:3360394-3360413 | None:intergenic | 45.0% | |
| GCACCTTACGATTGCATTTG+TGG | - | chr1.1:3358324-3358343 | MS.gene24382:intron | 45.0% | |
| GCATGTAGAGAGAACACCTA+TGG | - | chr1.1:3356915-3356934 | MS.gene24382:CDS | 45.0% | |
| GCTGTGAATCACTTCGGAAT+AGG | - | chr1.1:3358656-3358675 | MS.gene24382:intron | 45.0% | |
| GCTTCTTTCGACCTTGCATT+TGG | - | chr1.1:3359370-3359389 | MS.gene24382:intron | 45.0% | |
| GGAAAAAGTCCAATCCTCCA+AGG | + | chr1.1:3357405-3357424 | None:intergenic | 45.0% | |
| GGTATCCACACAAACACCTT+TGG | - | chr1.1:3360618-3360637 | MS.gene24382:intron | 45.0% | |
| GTGGTGAATCTATGTTTGGG+TGG | + | chr1.1:3359786-3359805 | None:intergenic | 45.0% | |
| TAGAGATAAACTGGAGCCAG+AGG | - | chr1.1:3359148-3359167 | MS.gene24382:intron | 45.0% | |
| TATGGGAGTCCTCCTAATGT+GGG | - | chr1.1:3359635-3359654 | MS.gene24382:intron | 45.0% | |
| TCAGTAACACGGTGAGCATT+TGG | + | chr1.1:3360021-3360040 | None:intergenic | 45.0% | |
| TCCACCAACAAGGTTACTCA+AGG | + | chr1.1:3359505-3359524 | None:intergenic | 45.0% | |
| TCGACCTTGCATTTGGTATG+TGG | - | chr1.1:3359377-3359396 | MS.gene24382:intron | 45.0% | |
| TCTACATTCGCAACCTCAAC+AGG | + | chr1.1:3361734-3361753 | None:intergenic | 45.0% | |
| TGAACGTCCAATCCTAAGTG+TGG | - | chr1.1:3358172-3358191 | MS.gene24382:intron | 45.0% | |
| TGAAGGATGAAACTGCACGA+TGG | - | chr1.1:3358624-3358643 | MS.gene24382:intron | 45.0% | |
| TGAGCATTTGGACAGTTGTG+AGG | + | chr1.1:3360009-3360028 | None:intergenic | 45.0% | |
| TGCACCAGTGATTGTTCCAT+GGG | - | chr1.1:3362916-3362935 | MS.gene24382:CDS | 45.0% | |
| TGGCCAGAGTTGTCCTTATA+TGG | - | chr1.1:3358025-3358044 | MS.gene24382:intron | 45.0% | |
| TTGGACTTGAGTCCCACATT+AGG | + | chr1.1:3359650-3359669 | None:intergenic | 45.0% | |
| TTGGTTGTCGTTGTTGGTGT+TGG | - | chr1.1:3357131-3357150 | MS.gene24382:CDS | 45.0% | |
| TTTAATGTCACTCACGCGTG+TGG | - | chr1.1:3361232-3361251 | MS.gene24382:intron | 45.0% | |
| ! | ACTAGATCTGGAGTCCCTAA+AGG | + | chr1.1:3358908-3358927 | None:intergenic | 45.0% |
| ! | CTCCTGACTAGAGTATCCAT+AGG | + | chr1.1:3356934-3356953 | None:intergenic | 45.0% |
| ! | TGAAGTTCAGGTTTGCACTC+AGG | + | chr1.1:3362003-3362022 | None:intergenic | 45.0% |
| ! | TGAGCTTAGCTCAGTTGGTA+TGG | + | chr1.1:3362442-3362461 | None:intergenic | 45.0% |
| ! | TGATTGCTGTCAAGCTTGCT+TGG | - | chr1.1:3362083-3362102 | MS.gene24382:intron | 45.0% |
| !! | AACACCCAAAGGTGTTTGTG+TGG | + | chr1.1:3360626-3360645 | None:intergenic | 45.0% |
| !! | CAAATTGGGGGCATCTATTC+TGG | + | chr1.1:3358931-3358950 | None:intergenic | 45.0% |
| !! | GTGGTTTGATTTGGGCCTTT+AGG | - | chr1.1:3358890-3358909 | MS.gene24382:intron | 45.0% |
| !! | GTTTTCAAGCCAAAGTACGG+AGG | - | chr1.1:3356341-3356360 | MS.gene24382:intron | 45.0% |
| !! | TGTCGTTGTTGGTGTTGGAA+CGG | - | chr1.1:3357136-3357155 | MS.gene24382:CDS | 45.0% |
| !! | TGTGGGGAGGTGTTGTTATT+GGG | - | chr1.1:3358190-3358209 | MS.gene24382:intron | 45.0% |
| !! | TTGCCGAAGAAATTGGCCTT+TGG | - | chr1.1:3361705-3361724 | MS.gene24382:intron | 45.0% |
| !!! | TTTTTTTTTGGTGGTGGCCG+GGG | - | chr1.1:3362380-3362399 | MS.gene24382:intron | 45.0% |
| !!! | AAAATTTTATATATAAACAT+TGG | + | chr1.1:3361169-3361188 | None:intergenic | 5.0% |
| !!! | AAATTTTATATATAAACATT+GGG | + | chr1.1:3361168-3361187 | None:intergenic | 5.0% |
| !!! | TATTGAAATATTTTAAAATT+CGG | - | chr1.1:3357921-3357940 | MS.gene24382:intron | 5.0% |
| AACAACACCTCCCCACACTT+AGG | + | chr1.1:3358187-3358206 | None:intergenic | 50.0% | |
| ACCATTGACCCTTGGAGGAT+TGG | - | chr1.1:3357393-3357412 | MS.gene24382:CDS | 50.0% | |
| ACCATTTCTCACGAAGAGGC+AGG | - | chr1.1:3361473-3361492 | MS.gene24382:intron | 50.0% | |
| ACCTGCCTCTTCGTGAGAAA+TGG | + | chr1.1:3361477-3361496 | None:intergenic | 50.0% | |
| ACTAAGTCGGATCGGCTACA+TGG | + | chr1.1:3357101-3357120 | None:intergenic | 50.0% | |
| AGGTTTGCACTCAGGTGGAA+GGG | + | chr1.1:3361995-3362014 | None:intergenic | 50.0% | |
| ATGAAAGATGGGAGGGGGTT+TGG | - | chr1.1:3360311-3360330 | MS.gene24382:intron | 50.0% | |
| ATGACGGTTCTGCGGTTAGA+TGG | - | chr1.1:3362031-3362050 | MS.gene24382:intron | 50.0% | |
| ATGTAGCCGATCCGACTTAG+TGG | - | chr1.1:3357100-3357119 | MS.gene24382:CDS | 50.0% | |
| ATGTGACCATTGACCCTTGG+AGG | - | chr1.1:3357388-3357407 | MS.gene24382:CDS | 50.0% | |
| CCTAAATCCTCTGCACCATC+AGG | + | chr1.1:3361770-3361789 | None:intergenic | 50.0% | |
| CTCTGATTGGGACTTCTTGG+TGG | - | chr1.1:3359272-3359291 | MS.gene24382:intron | 50.0% | |
| CTGCACCAGTGATTGTTCCA+TGG | - | chr1.1:3362915-3362934 | MS.gene24382:CDS | 50.0% | |
| GAAGAGGCAGGTATGGAGTA+TGG | - | chr1.1:3361485-3361504 | MS.gene24382:intron | 50.0% | |
| GAAGCTTCCATCTGGACTGT+TGG | - | chr1.1:3360384-3360403 | MS.gene24382:intron | 50.0% | |
| GACTTGAGTCCCACATTAGG+AGG | + | chr1.1:3359647-3359666 | None:intergenic | 50.0% | |
| GAGGGTTCAAAGTTGGGCAT+TGG | - | chr1.1:3361076-3361095 | MS.gene24382:intron | 50.0% | |
| GATCAGTACGCGGCAGAATA+AGG | + | chr1.1:3357457-3357476 | None:intergenic | 50.0% | |
| GATGTTTGGCAAGACCAGAC+GGG | - | chr1.1:3356809-3356828 | MS.gene24382:intron | 50.0% | |
| GCAACTCAACCTCCGTACTT+TGG | + | chr1.1:3356353-3356372 | None:intergenic | 50.0% | |
| GCATCTGCTCACTCTCTGAT+TGG | - | chr1.1:3359259-3359278 | MS.gene24382:intron | 50.0% | |
| GCTGTGCTTGCCGAAGAAAT+TGG | - | chr1.1:3361698-3361717 | MS.gene24382:intron | 50.0% | |
| GGAACAATCACTGGTGCAGA+TGG | + | chr1.1:3362914-3362933 | None:intergenic | 50.0% | |
| GGACCCACATACCAAATGCA+AGG | + | chr1.1:3359384-3359403 | None:intergenic | 50.0% | |
| GGATGTTTGGCAAGACCAGA+CGG | - | chr1.1:3356808-3356827 | MS.gene24382:intron | 50.0% | |
| GTGATGAATCACTTCGGCAG+AGG | + | chr1.1:3359815-3359834 | None:intergenic | 50.0% | |
| GTTAAATAGCGCGGCTAGAG+AGG | + | chr1.1:3357308-3357327 | None:intergenic | 50.0% | |
| TATTAGCTAACGGGGGTTGG+TGG | + | chr1.1:3360941-3360960 | None:intergenic | 50.0% | |
| TCAAGCAGCAACAACTCCAG+AGG | + | chr1.1:3362942-3362961 | None:intergenic | 50.0% | |
| TCCAATCCTCCAAGGGTCAA+TGG | + | chr1.1:3357397-3357416 | None:intergenic | 50.0% | |
| TCGCTCCATAGCAATGCCTT+GGG | + | chr1.1:3356460-3356479 | None:intergenic | 50.0% | |
| TGACGGTTCTGCGGTTAGAT+GGG | - | chr1.1:3362032-3362051 | MS.gene24382:intron | 50.0% | |
| TGGCCTTTGGATACCTGTTG+AGG | - | chr1.1:3361718-3361737 | MS.gene24382:intron | 50.0% | |
| TGTAGCCGATCCGACTTAGT+GGG | - | chr1.1:3357101-3357120 | MS.gene24382:CDS | 50.0% | |
| TTCTCACGAAGAGGCAGGTA+TGG | - | chr1.1:3361478-3361497 | MS.gene24382:intron | 50.0% | |
| ! | AGTTCAGGTTTGCACTCAGG+TGG | + | chr1.1:3362000-3362019 | None:intergenic | 50.0% |
| ! | CCTGATGGTGCAGAGGATTT+AGG | - | chr1.1:3361767-3361786 | MS.gene24382:intron | 50.0% |
| ! | TGACAAACCTGATGGTGCAG+AGG | - | chr1.1:3361760-3361779 | MS.gene24382:intron | 50.0% |
| ! | TGTAGCTGTTACTTGCTGGC+TGG | - | chr1.1:3357556-3357575 | MS.gene24382:intron | 50.0% |
| !! | GTGTGGGGAGGTGTTGTTAT+TGG | - | chr1.1:3358189-3358208 | MS.gene24382:intron | 50.0% |
| !! | TCACTCCCAAGGCATTGCTA+TGG | - | chr1.1:3356452-3356471 | MS.gene24382:intron | 50.0% |
| !! | TCGGAATAGGATGATGACGG+TGG | - | chr1.1:3358669-3358688 | MS.gene24382:intron | 50.0% |
| ACATGGGAGTCCCCTAGTGT+GGG | + | chr1.1:3358872-3358891 | None:intergenic | 55.0% | |
| ACTTCGGCAGAGGAAGACAG+TGG | + | chr1.1:3359805-3359824 | None:intergenic | 55.0% | |
| AGGAGGAAGTTCTTCCAGGC+AGG | - | chr1.1:3361968-3361987 | MS.gene24382:intron | 55.0% | |
| CACCTCCCCACACTTAGGAT+TGG | + | chr1.1:3358182-3358201 | None:intergenic | 55.0% | |
| CAGGTTTGCACTCAGGTGGA+AGG | + | chr1.1:3361996-3362015 | None:intergenic | 55.0% | |
| CCAACGGCCAAATAGACCAC+TGG | - | chr1.1:3359402-3359421 | MS.gene24382:intron | 55.0% | |
| CCAACTGAGCTAAGCTCACG+AGG | - | chr1.1:3362444-3362463 | MS.gene24382:intron | 55.0% | |
| CCAGAGGAGGAAGTTCTTCC+AGG | - | chr1.1:3361964-3361983 | MS.gene24382:intron | 55.0% | |
| CCAGTGGTCTATTTGGCCGT+TGG | + | chr1.1:3359405-3359424 | None:intergenic | 55.0% | |
| CCTCGTGAGCTTAGCTCAGT+TGG | + | chr1.1:3362447-3362466 | None:intergenic | 55.0% | |
| CCTGGAAGAACTTCCTCCTC+TGG | + | chr1.1:3361967-3361986 | None:intergenic | 55.0% | |
| CTCGCTCCATAGCAATGCCT+TGG | + | chr1.1:3356461-3356480 | None:intergenic | 55.0% | |
| GACGGTTCTGCGGTTAGATG+GGG | - | chr1.1:3362033-3362052 | MS.gene24382:intron | 55.0% | |
| GAGGCCCATGGAACAATCAC+TGG | + | chr1.1:3362923-3362942 | None:intergenic | 55.0% | |
| GGAGGAAGTTCTTCCAGGCA+GGG | - | chr1.1:3361969-3361988 | MS.gene24382:intron | 55.0% | |
| GTCCAATCCTAAGTGTGGGG+AGG | - | chr1.1:3358177-3358196 | MS.gene24382:intron | 55.0% | |
| GTCCAGATGGAAGCTTCGAC+TGG | + | chr1.1:3360381-3360400 | None:intergenic | 55.0% | |
| GTCCAGTCGAAGCTTCCATC+TGG | - | chr1.1:3360376-3360395 | MS.gene24382:intron | 55.0% | |
| GTGATTGTTCCATGGGCCTC+TGG | - | chr1.1:3362923-3362942 | MS.gene24382:CDS | 55.0% | |
| ! | TTCTGCCGCGTACTGATCCA+TGG | - | chr1.1:3357459-3357478 | MS.gene24382:intron | 55.0% |
| !! | CAAGGCATTGCTATGGAGCG+AGG | - | chr1.1:3356459-3356478 | MS.gene24382:intron | 55.0% |
| AAGGTCCGGGGTTCAAACCC+CGG | + | chr1.1:3362400-3362419 | None:intergenic | 60.0% | |
| CACACTAGGGGACTCCCATG+TGG | - | chr1.1:3358871-3358890 | MS.gene24382:intron | 60.0% | |
| CACATGGGAGTCCCCTAGTG+TGG | + | chr1.1:3358873-3358892 | None:intergenic | 60.0% | |
| GCAACAACTCCAGAGGCCCA+TGG | + | chr1.1:3362935-3362954 | None:intergenic | 60.0% | |
| TGGGCTTGAGGCCCACACTA+GGG | - | chr1.1:3358858-3358877 | MS.gene24382:intron | 60.0% | |
| TTGGGCTTGAGGCCCACACT+AGG | - | chr1.1:3358857-3358876 | MS.gene24382:intron | 60.0% | |
| GGGCTTGAGGCCCACACTAG+GGG | - | chr1.1:3358859-3358878 | MS.gene24382:intron | 65.0% | |
| GGTGGCCGGGGTTTGAACCC+CGG | - | chr1.1:3362392-3362411 | MS.gene24382:intron | 70.0% | |
| TCAGGTGGAAGGGCCCTGCC+TGG | + | chr1.1:3361985-3362004 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 3356174 | 3362961 | 3356174 | ID=MS.gene24382 |
| chr1.1 | mRNA | 3356174 | 3362961 | 3356174 | ID=MS.gene24382.t1;Parent=MS.gene24382 |
| chr1.1 | exon | 3362905 | 3362961 | 3362905 | ID=MS.gene24382.t1.exon1;Parent=MS.gene24382.t1 |
| chr1.1 | CDS | 3362905 | 3362961 | 3362905 | ID=cds.MS.gene24382.t1;Parent=MS.gene24382.t1 |
| chr1.1 | exon | 3362655 | 3362814 | 3362655 | ID=MS.gene24382.t1.exon2;Parent=MS.gene24382.t1 |
| chr1.1 | CDS | 3362655 | 3362814 | 3362655 | ID=cds.MS.gene24382.t1;Parent=MS.gene24382.t1 |
| chr1.1 | exon | 3357641 | 3357736 | 3357641 | ID=MS.gene24382.t1.exon3;Parent=MS.gene24382.t1 |
| chr1.1 | CDS | 3357641 | 3357736 | 3357641 | ID=cds.MS.gene24382.t1;Parent=MS.gene24382.t1 |
| chr1.1 | exon | 3357347 | 3357469 | 3357347 | ID=MS.gene24382.t1.exon4;Parent=MS.gene24382.t1 |
| chr1.1 | CDS | 3357347 | 3357469 | 3357347 | ID=cds.MS.gene24382.t1;Parent=MS.gene24382.t1 |
| chr1.1 | exon | 3356905 | 3357167 | 3356905 | ID=MS.gene24382.t1.exon5;Parent=MS.gene24382.t1 |
| chr1.1 | CDS | 3356905 | 3357167 | 3356905 | ID=cds.MS.gene24382.t1;Parent=MS.gene24382.t1 |
| chr1.1 | exon | 3356174 | 3356284 | 3356174 | ID=MS.gene24382.t1.exon6;Parent=MS.gene24382.t1 |
| chr1.1 | CDS | 3356174 | 3356284 | 3356174 | ID=cds.MS.gene24382.t1;Parent=MS.gene24382.t1 |
| Gene Sequence |
| Protein sequence |
