Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25680.t1 | XP_013450328.1 | 100 | 392 | 0 | 0 | 1 | 392 | 1 | 392 | 3.90E-198 | 700.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25680.t1 | Q8LFS6 | 63.2 | 402 | 128 | 8 | 1 | 392 | 1 | 392 | 1.3e-128 | 461.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25680.t1 | A0A072U4V5 | 100.0 | 392 | 0 | 0 | 1 | 392 | 1 | 392 | 2.8e-198 | 700.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene25680 | MS.gene64891 | PPI |
| MS.gene25680 | MS.gene39783 | PPI |
| MS.gene25680 | MS.gene86544 | PPI |
| MS.gene99555 | MS.gene25680 | PPI |
| MS.gene25680 | MS.gene86206 | PPI |
| MS.gene25680 | MS.gene35490 | PPI |
| MS.gene25680 | MS.gene035578 | PPI |
| MS.gene37610 | MS.gene25680 | PPI |
| MS.gene034408 | MS.gene25680 | PPI |
| MS.gene25680 | MS.gene016896 | PPI |
| MS.gene23814 | MS.gene25680 | PPI |
| MS.gene25680 | MS.gene022650 | PPI |
| MS.gene25680 | MS.gene65332 | PPI |
| MS.gene055437 | MS.gene25680 | PPI |
| MS.gene25680 | MS.gene027709 | PPI |
| MS.gene066499 | MS.gene25680 | PPI |
| MS.gene25680 | MS.gene037838 | PPI |
| MS.gene44305 | MS.gene25680 | PPI |
| MS.gene72659 | MS.gene25680 | PPI |
| MS.gene25680 | MS.gene69969 | PPI |
| MS.gene29182 | MS.gene25680 | PPI |
| MS.gene25680 | MS.gene47029 | PPI |
| MS.gene25680 | MS.gene84284 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25680.t1 | MTR_7g107580 | 100.000 | 392 | 0 | 0 | 1 | 392 | 1 | 392 | 0.0 | 812 |
| MS.gene25680.t1 | MTR_7g107580 | 99.745 | 392 | 0 | 1 | 1 | 392 | 1 | 391 | 0.0 | 805 |
| MS.gene25680.t1 | MTR_7g107580 | 99.710 | 345 | 0 | 1 | 1 | 345 | 1 | 344 | 0.0 | 706 |
| MS.gene25680.t1 | MTR_4g122650 | 48.045 | 179 | 89 | 2 | 16 | 191 | 88 | 265 | 8.92e-51 | 181 |
| MS.gene25680.t1 | MTR_7g109810 | 30.556 | 216 | 127 | 2 | 16 | 214 | 74 | 283 | 6.73e-29 | 116 |
| MS.gene25680.t1 | MTR_7g109810 | 32.984 | 191 | 105 | 3 | 16 | 189 | 74 | 258 | 5.75e-28 | 115 |
| MS.gene25680.t1 | MTR_7g109810 | 32.461 | 191 | 106 | 2 | 16 | 189 | 74 | 258 | 5.80e-28 | 111 |
| MS.gene25680.t1 | MTR_4g085540 | 28.374 | 289 | 173 | 11 | 1 | 270 | 198 | 471 | 5.29e-16 | 80.1 |
| MS.gene25680.t1 | MTR_3g065190 | 25.514 | 243 | 166 | 6 | 6 | 245 | 16 | 246 | 1.38e-14 | 75.1 |
| MS.gene25680.t1 | MTR_1g097440 | 26.542 | 373 | 204 | 18 | 5 | 320 | 197 | 556 | 1.59e-13 | 72.4 |
| MS.gene25680.t1 | MTR_5g097580 | 26.163 | 172 | 109 | 4 | 14 | 168 | 4 | 174 | 1.21e-12 | 69.7 |
| MS.gene25680.t1 | MTR_5g097580 | 26.163 | 172 | 109 | 4 | 14 | 168 | 4 | 174 | 1.32e-12 | 69.3 |
| MS.gene25680.t1 | MTR_3g101370 | 24.138 | 261 | 157 | 8 | 4 | 247 | 175 | 411 | 1.40e-12 | 68.9 |
| MS.gene25680.t1 | MTR_2g026180 | 22.997 | 287 | 167 | 7 | 17 | 275 | 5 | 265 | 6.13e-12 | 67.4 |
| MS.gene25680.t1 | MTR_3g082650 | 25.146 | 171 | 109 | 4 | 17 | 178 | 19 | 179 | 2.64e-11 | 64.7 |
| MS.gene25680.t1 | MTR_7g118120 | 26.316 | 171 | 113 | 5 | 17 | 184 | 105 | 265 | 3.40e-11 | 65.1 |
| MS.gene25680.t1 | MTR_1g019150 | 28.000 | 275 | 162 | 11 | 7 | 263 | 207 | 463 | 4.04e-11 | 65.1 |
| MS.gene25680.t1 | MTR_3g103420 | 24.339 | 189 | 120 | 3 | 12 | 177 | 6 | 194 | 6.69e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25680.t1 | AT4G03110 | 68.718 | 390 | 95 | 9 | 15 | 392 | 17 | 391 | 0.0 | 514 |
| MS.gene25680.t1 | AT4G03110 | 68.798 | 391 | 94 | 10 | 15 | 392 | 17 | 392 | 0.0 | 512 |
| MS.gene25680.t1 | AT4G03110 | 68.798 | 391 | 94 | 10 | 15 | 392 | 17 | 392 | 0.0 | 512 |
| MS.gene25680.t1 | AT1G03457 | 65.306 | 392 | 109 | 10 | 7 | 392 | 3 | 373 | 1.69e-174 | 493 |
| MS.gene25680.t1 | AT1G03457 | 63.840 | 401 | 109 | 11 | 7 | 392 | 3 | 382 | 5.00e-171 | 485 |
| MS.gene25680.t1 | AT1G03457 | 60.900 | 289 | 86 | 10 | 110 | 392 | 1 | 268 | 1.67e-106 | 317 |
| MS.gene25680.t1 | AT4G16280 | 43.716 | 183 | 99 | 2 | 10 | 189 | 114 | 295 | 1.86e-48 | 172 |
| MS.gene25680.t1 | AT4G16280 | 43.716 | 183 | 99 | 2 | 10 | 189 | 39 | 220 | 1.66e-47 | 172 |
| MS.gene25680.t1 | AT4G16280 | 43.716 | 183 | 99 | 2 | 10 | 189 | 114 | 295 | 2.48e-47 | 172 |
| MS.gene25680.t1 | AT2G47310 | 32.967 | 182 | 112 | 2 | 17 | 189 | 111 | 291 | 3.41e-26 | 110 |
| MS.gene25680.t1 | AT4G34110 | 27.305 | 282 | 171 | 11 | 1 | 263 | 200 | 466 | 2.61e-15 | 78.2 |
| MS.gene25680.t1 | AT4G00830 | 26.901 | 171 | 112 | 5 | 17 | 184 | 117 | 277 | 3.64e-14 | 74.3 |
| MS.gene25680.t1 | AT4G00830 | 27.485 | 171 | 111 | 5 | 17 | 184 | 117 | 277 | 3.88e-14 | 74.3 |
| MS.gene25680.t1 | AT4G00830 | 27.485 | 171 | 111 | 5 | 17 | 184 | 117 | 277 | 3.88e-14 | 74.3 |
| MS.gene25680.t1 | AT4G00830 | 27.485 | 171 | 111 | 5 | 17 | 184 | 117 | 277 | 3.88e-14 | 74.3 |
| MS.gene25680.t1 | AT5G47620 | 25.984 | 254 | 159 | 9 | 14 | 253 | 4 | 242 | 4.82e-14 | 73.6 |
| MS.gene25680.t1 | AT5G47620 | 25.984 | 254 | 159 | 9 | 14 | 253 | 4 | 242 | 4.82e-14 | 73.6 |
| MS.gene25680.t1 | AT5G47620 | 25.984 | 254 | 159 | 9 | 14 | 253 | 4 | 242 | 4.82e-14 | 73.6 |
| MS.gene25680.t1 | AT1G71770 | 26.882 | 279 | 150 | 11 | 18 | 250 | 241 | 511 | 2.40e-13 | 72.0 |
| MS.gene25680.t1 | AT1G71770 | 26.882 | 279 | 150 | 11 | 18 | 250 | 241 | 511 | 2.40e-13 | 72.0 |
| MS.gene25680.t1 | AT2G18510 | 26.316 | 228 | 155 | 7 | 6 | 227 | 16 | 236 | 2.43e-13 | 71.2 |
| MS.gene25680.t1 | AT3G07810 | 26.316 | 171 | 106 | 4 | 17 | 168 | 7 | 176 | 7.75e-13 | 70.1 |
| MS.gene25680.t1 | AT3G07810 | 26.316 | 171 | 106 | 4 | 17 | 168 | 7 | 176 | 9.94e-13 | 69.7 |
| MS.gene25680.t1 | AT4G00830 | 28.402 | 169 | 104 | 4 | 17 | 184 | 117 | 269 | 1.17e-12 | 69.7 |
| MS.gene25680.t1 | AT4G00830 | 28.402 | 169 | 104 | 4 | 17 | 184 | 117 | 269 | 1.17e-12 | 69.7 |
| MS.gene25680.t1 | AT2G23350 | 26.667 | 345 | 207 | 17 | 1 | 324 | 210 | 529 | 1.34e-11 | 66.6 |
| MS.gene25680.t1 | AT3G13224 | 21.698 | 212 | 131 | 4 | 17 | 220 | 20 | 204 | 1.39e-11 | 65.9 |
| MS.gene25680.t1 | AT5G50250 | 24.324 | 185 | 123 | 4 | 14 | 187 | 111 | 289 | 4.68e-11 | 63.5 |
| MS.gene25680.t1 | AT5G40490 | 26.316 | 171 | 107 | 4 | 17 | 178 | 43 | 203 | 5.17e-11 | 64.3 |
| MS.gene25680.t1 | AT3G13224 | 21.698 | 212 | 131 | 4 | 17 | 220 | 11 | 195 | 7.61e-11 | 63.5 |
| MS.gene25680.t1 | AT1G58470 | 23.077 | 273 | 148 | 9 | 14 | 255 | 4 | 245 | 8.01e-11 | 63.5 |
| MS.gene25680.t1 | AT1G58470 | 23.077 | 273 | 148 | 9 | 14 | 255 | 4 | 245 | 8.01e-11 | 63.5 |
Find 0 sgRNAs with CRISPR-Local
Find 292 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATCAATTATGTAATTAT+TGG | - | 51712:3558-3577 | MS.gene25680:intron | 10.0% |
| !! | GTCATATAAATAATTATTAA+CGG | + | 51712:5227-5246 | MS.gene25680:intergenic | 10.0% |
| !! | TCATATAAATAATTATTAAC+GGG | + | 51712:5226-5245 | MS.gene25680:intergenic | 10.0% |
| !! | TTAATAATTATTTATATGAC+AGG | - | 51712:5227-5246 | MS.gene25680:intron | 10.0% |
| !!! | GTAATATAATGTATTTTATA+TGG | - | 51712:4609-4628 | MS.gene25680:intron | 10.0% |
| !! | AAAAAAAAAACACGAAAATT+AGG | + | 51712:2870-2889 | MS.gene25680:intergenic | 15.0% |
| !! | AAAAAAAAACACGAAAATTA+GGG | + | 51712:2869-2888 | MS.gene25680:intergenic | 15.0% |
| !! | AATAATGATACAAAATAATG+TGG | + | 51712:3960-3979 | MS.gene25680:intergenic | 15.0% |
| !! | ATTTCTATAATTAAGTTTAG+TGG | - | 51712:3589-3608 | MS.gene25680:intron | 15.0% |
| !! | CATATAAATAATTATTAACG+GGG | + | 51712:5225-5244 | MS.gene25680:intergenic | 15.0% |
| !! | CATGTTGATATATTTATATT+CGG | - | 51712:6478-6497 | MS.gene25680:intron | 15.0% |
| !! | CTGATAATAATTTAAGAAAA+TGG | - | 51712:3333-3352 | MS.gene25680:CDS | 15.0% |
| !! | GGAATAAAATTTAAAAATTC+AGG | + | 51712:4554-4573 | MS.gene25680:intergenic | 15.0% |
| !! | TAATAATTTAAGAAAATGGA+CGG | - | 51712:3337-3356 | MS.gene25680:CDS | 15.0% |
| !! | TCATATGAATTGAATAAAAA+CGG | + | 51712:3034-3053 | MS.gene25680:intergenic | 15.0% |
| !!! | ATATTACTATATTTTCACTT+AGG | - | 51712:6851-6870 | MS.gene25680:CDS | 15.0% |
| !!! | TAATTTTAGCAATTTATGTT+TGG | - | 51712:3155-3174 | MS.gene25680:intron | 15.0% |
| !!! | TTATTCCTATTTTTCATTTT+TGG | - | 51712:4567-4586 | MS.gene25680:intron | 15.0% |
| !! | AAAATTGAAATAACAATTGC+AGG | + | 51712:5116-5135 | MS.gene25680:intergenic | 20.0% |
| !! | AAATTTAAAAATTCAGGTGA+TGG | + | 51712:4548-4567 | MS.gene25680:intergenic | 20.0% |
| !! | AATAAGTTAAAGGACTAAAA+AGG | + | 51712:6512-6531 | MS.gene25680:intergenic | 20.0% |
| !! | AATAATTTAAGAAAATGGAC+GGG | - | 51712:3338-3357 | MS.gene25680:CDS | 20.0% |
| !! | AGATAATTACTTATGAAAGA+AGG | + | 51712:4179-4198 | MS.gene25680:intergenic | 20.0% |
| !! | ATTATATTACACAATTAACC+TGG | + | 51712:4599-4618 | MS.gene25680:intergenic | 20.0% |
| !! | ATTATTATCAGTGTCATATA+TGG | + | 51712:3324-3343 | MS.gene25680:intergenic | 20.0% |
| !! | ATTCATTCTTTATTCTTTCT+AGG | - | 51712:4361-4380 | MS.gene25680:intron | 20.0% |
| !! | CATTAGTGACATAATTAAAA+TGG | + | 51712:3786-3805 | MS.gene25680:intergenic | 20.0% |
| !! | TACTACCAAAAATGAAAAAT+AGG | + | 51712:4575-4594 | MS.gene25680:intergenic | 20.0% |
| !! | TAGTAATATTTATCGTTGTA+AGG | + | 51712:6840-6859 | MS.gene25680:intergenic | 20.0% |
| !!! | AAAATGTGATGATTTTTGAA+TGG | + | 51712:5989-6008 | MS.gene25680:intergenic | 20.0% |
| !!! | AAGGATTTACAAATTTTAAG+AGG | - | 51712:4299-4318 | MS.gene25680:intron | 20.0% |
| !!! | ATCTCTAAAATGAGTAAATT+TGG | + | 51712:6739-6758 | MS.gene25680:intergenic | 20.0% |
| !!! | ATGTTTTTTGTTTCTAATTC+AGG | - | 51712:4003-4022 | MS.gene25680:intron | 20.0% |
| !!! | CATCTTGTATTTAAAATGAT+TGG | + | 51712:4741-4760 | MS.gene25680:intergenic | 20.0% |
| !!! | GTTACAATTTTAGTTGTAAA+TGG | - | 51712:4994-5013 | MS.gene25680:intron | 20.0% |
| !!! | TAAAGCCTTAAATACATTTT+TGG | + | 51712:6798-6817 | MS.gene25680:intergenic | 20.0% |
| !!! | TCATTTTAAATACAAGATGA+AGG | - | 51712:4742-4761 | MS.gene25680:intron | 20.0% |
| !!! | TCGTGTTTTTTTTTTTTTGT+AGG | - | 51712:2875-2894 | MS.gene25680:intron | 20.0% |
| !!! | TTTTAGGGAAATAGTAATAA+AGG | + | 51712:6681-6700 | MS.gene25680:intergenic | 20.0% |
| ! | AATGATAATAAATGACTTCC+AGG | + | 51712:5612-5631 | MS.gene25680:intergenic | 25.0% |
| ! | ACTACTATTTAGCAATATAG+TGG | - | 51712:4821-4840 | MS.gene25680:intron | 25.0% |
| ! | AGTTAACGTAATTCATTCAT+AGG | + | 51712:3738-3757 | MS.gene25680:intergenic | 25.0% |
| ! | ATAATTTAAGAAAATGGACG+GGG | - | 51712:3339-3358 | MS.gene25680:CDS | 25.0% |
| ! | ATATTTGTATCACAACTACT+TGG | + | 51712:3839-3858 | MS.gene25680:intergenic | 25.0% |
| ! | CATTATTCTTCATTCAGATT+GGG | - | 51712:3973-3992 | MS.gene25680:intron | 25.0% |
| ! | GAACCTCAAAAATAAGTTAA+AGG | + | 51712:6522-6541 | MS.gene25680:intergenic | 25.0% |
| ! | GCATGTCATTGATATAAAAA+TGG | + | 51712:4157-4176 | MS.gene25680:intergenic | 25.0% |
| ! | GGAAGTCATTTATTATCATT+TGG | - | 51712:5612-5631 | MS.gene25680:intron | 25.0% |
| ! | GTTCATCAAAATAACAAACT+TGG | + | 51712:3426-3445 | MS.gene25680:intergenic | 25.0% |
| ! | TAATTCATTCATAGGTTACT+TGG | + | 51712:3730-3749 | MS.gene25680:intergenic | 25.0% |
| ! | TACAACTAAAATTGTAACTG+AGG | + | 51712:4992-5011 | MS.gene25680:intergenic | 25.0% |
| ! | TAGTAGATTTGAAGAATTAG+CGG | + | 51712:2827-2846 | MS.gene25680:intergenic | 25.0% |
| ! | TATGAATGAATTACGTTAAC+TGG | - | 51712:3737-3756 | MS.gene25680:CDS | 25.0% |
| ! | TATTACTATTTCCCTAAAAC+TGG | - | 51712:6682-6701 | MS.gene25680:CDS | 25.0% |
| ! | TCAAAATGTTCAATAGTATC+CGG | + | 51712:3872-3891 | MS.gene25680:intergenic | 25.0% |
| ! | TCACAATAAGAAAACATTAC+CGG | - | 51712:2955-2974 | MS.gene25680:intron | 25.0% |
| ! | TCATTATTCTTCATTCAGAT+TGG | - | 51712:3972-3991 | MS.gene25680:intron | 25.0% |
| ! | TCATTCTATACAGAAATAGA+AGG | - | 51712:4667-4686 | MS.gene25680:intron | 25.0% |
| ! | TCTATAATTAAGTTTAGTGG+CGG | - | 51712:3592-3611 | MS.gene25680:intron | 25.0% |
| !! | GACATTAATTTTCTCTTGAT+AGG | - | 51712:6065-6084 | MS.gene25680:intron | 25.0% |
| !! | TCTTTATTCTTTCTAGGTTT+TGG | - | 51712:4367-4386 | MS.gene25680:intron | 25.0% |
| !! | TGCGTTTCATTGAAATTTTT+GGG | - | 51712:3695-3714 | MS.gene25680:intron | 25.0% |
| !! | TTAGATAGATAACATGCTTT+TGG | - | 51712:4926-4945 | MS.gene25680:intron | 25.0% |
| !! | TTATGCTGTTTAATTCAATG+TGG | - | 51712:3006-3025 | MS.gene25680:intron | 25.0% |
| !! | TTGCGTTTCATTGAAATTTT+TGG | - | 51712:3694-3713 | MS.gene25680:intron | 25.0% |
| !!! | AAGTAAAGGTGCTTATTTTA+CGG | - | 51712:4334-4353 | MS.gene25680:intron | 25.0% |
| !!! | AGTCCTTTAACTTATTTTTG+AGG | - | 51712:6516-6535 | MS.gene25680:intron | 25.0% |
| !!! | ATAGACTCATTTTAGAGTTA+AGG | + | 51712:6554-6573 | MS.gene25680:intergenic | 25.0% |
| !!! | ATAGTTTCTAGGATTCATAT+TGG | + | 51712:6211-6230 | MS.gene25680:intergenic | 25.0% |
| !!! | CTTATTTTTGAGGTTCAATT+TGG | - | 51712:6526-6545 | MS.gene25680:intron | 25.0% |
| !!! | TAGACTCATTTTAGAGTTAA+GGG | + | 51712:6553-6572 | MS.gene25680:intergenic | 25.0% |
| !!! | TAGTTTCTAGGATTCATATT+GGG | + | 51712:6210-6229 | MS.gene25680:intergenic | 25.0% |
| AAAATTGTAACTGAGGTTGA+AGG | + | 51712:4985-5004 | MS.gene25679:intergenic | 30.0% | |
| AAATGGTCTTTGCAGTATAT+TGG | - | 51712:5011-5030 | MS.gene25680:intron | 30.0% | |
| AACCAAAAATGTGAAACACT+AGG | + | 51712:3253-3272 | MS.gene25680:intergenic | 30.0% | |
| ACAATAAGAAAACATTACCG+GGG | - | 51712:2957-2976 | MS.gene25680:intron | 30.0% | |
| ACACACATGACAAAATTTGA+CGG | - | 51712:5649-5668 | MS.gene25680:intron | 30.0% | |
| ACCAAAAATGTGAAACACTA+GGG | + | 51712:3252-3271 | MS.gene25680:intergenic | 30.0% | |
| AGGGACCAAAAATGTATTTA+AGG | - | 51712:6790-6809 | MS.gene25680:intron | 30.0% | |
| ATCCTTTATAGTTCCATACT+TGG | + | 51712:4285-4304 | MS.gene25680:intergenic | 30.0% | |
| ATTCAGTCACAAAATCTTGT+TGG | - | 51712:5047-5066 | MS.gene25680:intron | 30.0% | |
| ATTGAACAGATAAGGATGAT+TGG | - | 51712:3461-3480 | MS.gene25680:CDS | 30.0% | |
| CACAATAAGAAAACATTACC+GGG | - | 51712:2956-2975 | MS.gene25680:intron | 30.0% | |
| GATATATGCTGTCATGTATA+GGG | - | 51712:5706-5725 | MS.gene25680:intron | 30.0% | |
| GATGCATTATTGAACAGATA+AGG | - | 51712:3453-3472 | MS.gene25680:CDS | 30.0% | |
| TACAAATATGCCTAAAAAGC+CGG | - | 51712:3850-3869 | MS.gene25680:CDS | 30.0% | |
| TAGTAATAAAGGCTTAGCTT+TGG | + | 51712:6670-6689 | MS.gene25680:intergenic | 30.0% | |
| TATCACATACCTCAAGAATT+TGG | - | 51712:6899-6918 | MS.gene25680:CDS | 30.0% | |
| TCAACTTCAGAAATGTTCTT+TGG | + | 51712:4245-4264 | MS.gene25680:intergenic | 30.0% | |
| TCACTTGCAATGTTTGATAA+CGG | + | 51712:6716-6735 | MS.gene25680:intergenic | 30.0% | |
| TGATATATGCTGTCATGTAT+AGG | - | 51712:5705-5724 | MS.gene25680:intron | 30.0% | |
| TGCAAACACAAGACAAAAAA+AGG | + | 51712:5586-5605 | MS.gene25680:intergenic | 30.0% | |
| TTCCTTAATCACAATTCACA+AGG | - | 51712:4392-4411 | MS.gene25680:intron | 30.0% | |
| ! | AATCAATGGAAAGCACAAAA+TGG | - | 51712:4503-4522 | MS.gene25680:intron | 30.0% |
| ! | AGCATCTGATCAGTAATTTT+GGG | + | 51712:5547-5566 | MS.gene25680:intergenic | 30.0% |
| ! | AGGGAAAATAATTTGTGCTT+GGG | + | 51712:5505-5524 | MS.gene25680:intergenic | 30.0% |
| ! | GAACACTATTTTCTTTGACA+AGG | + | 51712:3523-3542 | MS.gene25680:intergenic | 30.0% |
| ! | TAGCATCTGATCAGTAATTT+TGG | + | 51712:5548-5567 | MS.gene25680:intergenic | 30.0% |
| !! | AGTTTCTAGGATTCATATTG+GGG | + | 51712:6209-6228 | MS.gene25680:intergenic | 30.0% |
| !!! | TGGTGCTTATTGCTATTTTT+GGG | - | 51712:3175-3194 | MS.gene25680:intron | 30.0% |
| !!! | TTGGTGCTTATTGCTATTTT+TGG | - | 51712:3174-3193 | MS.gene25680:intron | 30.0% |
| AACTCTACCAAATGGTTGAA+AGG | + | 51712:6945-6964 | MS.gene25680:intergenic | 35.0% | |
| AACTTGATCCAAGTTTGGAA+AGG | - | 51712:5254-5273 | MS.gene25680:intron | 35.0% | |
| AATGAATTACGTTAACTGGC+AGG | - | 51712:3741-3760 | MS.gene25680:CDS | 35.0% | |
| ACCAAACCGAACCTTAAATT+AGG | - | 51712:6764-6783 | MS.gene25680:intron | 35.0% | |
| ACTTGATCCAAGTTTGGAAA+GGG | - | 51712:5255-5274 | MS.gene25680:intron | 35.0% | |
| AGCCATCCAAAAAGAATAAG+CGG | + | 51712:4713-4732 | MS.gene25680:intergenic | 35.0% | |
| AGCTGAATAAATCTCAAGAC+TGG | - | 51712:5332-5351 | MS.gene25680:CDS | 35.0% | |
| AGTGATGAAAGCTATAAGAG+TGG | + | 51712:3205-3224 | MS.gene25680:intergenic | 35.0% | |
| ATACAGAAATAGAAGGCAAG+TGG | - | 51712:4674-4693 | MS.gene25680:intron | 35.0% | |
| ATATAACGGTTATGGCTATC+AGG | - | 51712:5882-5901 | MS.gene25680:intron | 35.0% | |
| ATGTGAAACACTAGGGTATA+TGG | + | 51712:3245-3264 | MS.gene25680:intergenic | 35.0% | |
| CAAAATGGAAACCTAATGGT+GGG | - | 51712:5148-5167 | MS.gene25680:CDS | 35.0% | |
| CAATAAGAAAACATTACCGG+GGG | - | 51712:2958-2977 | MS.gene25680:intron | 35.0% | |
| CGAACCTTAAATTAGGCTAA+GGG | - | 51712:6771-6790 | MS.gene25680:intron | 35.0% | |
| CTCCAAGTATGGAACTATAA+AGG | - | 51712:4280-4299 | MS.gene25680:intron | 35.0% | |
| CTTATTGTGACACGCATTAA+CGG | + | 51712:2945-2964 | MS.gene25680:intergenic | 35.0% | |
| GACATAATTAAAATGGAGCG+TGG | + | 51712:3779-3798 | MS.gene25680:intergenic | 35.0% | |
| GAGAAGAACTGCATGAATTA+AGG | + | 51712:5952-5971 | MS.gene25680:intergenic | 35.0% | |
| GCTGAATAAATCTCAAGACT+GGG | - | 51712:5333-5352 | MS.gene25680:CDS | 35.0% | |
| GGTTATGTTCCTCCATATAA+CGG | - | 51712:5868-5887 | MS.gene25680:intron | 35.0% | |
| GTCTCAAAATGGAAACCTAA+TGG | - | 51712:5144-5163 | MS.gene25680:CDS | 35.0% | |
| GTCTTGAGATTTATTCAGCT+CGG | + | 51712:5332-5351 | MS.gene25680:intergenic | 35.0% | |
| GTGATGAAAGCTATAAGAGT+GGG | + | 51712:3204-3223 | MS.gene25680:intergenic | 35.0% | |
| TACAGAAATAGAAGGCAAGT+GGG | - | 51712:4675-4694 | MS.gene25680:intron | 35.0% | |
| TCAAAATGGAAACCTAATGG+TGG | - | 51712:5147-5166 | MS.gene25680:CDS | 35.0% | |
| TCAGAACACAAACTCTTCAT+TGG | - | 51712:4212-4231 | MS.gene25680:intron | 35.0% | |
| TCTCAGCATCCTTCATTATT+TGG | - | 51712:5832-5851 | MS.gene25680:intron | 35.0% | |
| TCTTGAGATTTATTCAGCTC+GGG | + | 51712:5331-5350 | MS.gene25680:intergenic | 35.0% | |
| TCTTGATCTCCAAATTCTTG+AGG | + | 51712:6911-6930 | MS.gene25680:intergenic | 35.0% | |
| TGAATCAAGGAAATGCATTG+CGG | - | 51712:6172-6191 | MS.gene25680:intron | 35.0% | |
| TGATAGCCATAACCGTTATA+TGG | + | 51712:5883-5902 | MS.gene25680:intergenic | 35.0% | |
| TGTGAAACACTAGGGTATAT+GGG | + | 51712:3244-3263 | MS.gene25680:intergenic | 35.0% | |
| TGTTCCCTTAGTTGTCAAAT+GGG | - | 51712:5735-5754 | MS.gene25680:intron | 35.0% | |
| TTATGTCCGTTAACACAAGT+TGG | - | 51712:6587-6606 | MS.gene25680:intron | 35.0% | |
| TTATTAACGGGGTAAAACCT+AGG | + | 51712:5214-5233 | MS.gene25680:intergenic | 35.0% | |
| TTCTCTTACCATGTTGTAGT+AGG | - | 51712:4426-4445 | MS.gene25680:intron | 35.0% | |
| TTTGACGACTTGATTATCCA+AGG | - | 51712:3887-3906 | MS.gene25680:intron | 35.0% | |
| TTTGTATCACAACTACTTGG+AGG | + | 51712:3836-3855 | MS.gene25680:intergenic | 35.0% | |
| TTTGTATCCCTGTCTCAAAA+TGG | - | 51712:5133-5152 | MS.gene25680:CDS | 35.0% | |
| ! | AACCGCTTATTCTTTTTGGA+TGG | - | 51712:4708-4727 | MS.gene25680:intron | 35.0% |
| ! | ACCCTAGTGTTTCACATTTT+TGG | - | 51712:3248-3267 | MS.gene25680:CDS | 35.0% |
| ! | AGCCTTGTGAATTGTGATTA+AGG | + | 51712:4397-4416 | MS.gene25680:intergenic | 35.0% |
| ! | CCTTAGCCTAATTTAAGGTT+CGG | + | 51712:6773-6792 | MS.gene25680:intergenic | 35.0% |
| ! | GAAAGTGTGAAATTGTTCGT+AGG | - | 51712:2653-2672 | MS.gene25680:CDS | 35.0% |
| ! | GACACAATTGTTGTTACTGT+GGG | - | 51712:3638-3657 | MS.gene25680:intron | 35.0% |
| ! | GAGGGAAAATAATTTGTGCT+TGG | + | 51712:5506-5525 | MS.gene25680:intergenic | 35.0% |
| ! | GCACAAATTATTTTCCCTCT+TGG | - | 51712:5507-5526 | MS.gene25680:intron | 35.0% |
| ! | GTGTTAACGGACATAACTTA+GGG | + | 51712:6583-6602 | MS.gene25680:intergenic | 35.0% |
| ! | GTTGAACCGCTTATTCTTTT+TGG | - | 51712:4704-4723 | MS.gene25680:intron | 35.0% |
| ! | GTTTTTGTTGACAAAGCTAC+CGG | - | 51712:6977-6996 | MS.gene25680:CDS | 35.0% |
| ! | TCAATAGTATCCGGCTTTTT+AGG | + | 51712:3863-3882 | MS.gene25680:intergenic | 35.0% |
| ! | TGACACAATTGTTGTTACTG+TGG | - | 51712:3637-3656 | MS.gene25680:intron | 35.0% |
| ! | TGATTTTCCCTTTCCAAACT+TGG | + | 51712:5265-5284 | MS.gene25680:intergenic | 35.0% |
| ! | TGTGTTAACGGACATAACTT+AGG | + | 51712:6584-6603 | MS.gene25680:intergenic | 35.0% |
| ! | TGTTAACGGACATAACTTAG+GGG | + | 51712:6582-6601 | MS.gene25680:intergenic | 35.0% |
| ! | TGTTTAGAACACTGAAGTGT+TGG | - | 51712:3913-3932 | MS.gene25680:intron | 35.0% |
| !! | TGTATCGTGTTAGTTCTACT+AGG | - | 51712:3395-3414 | MS.gene25680:CDS | 35.0% |
| !!! | TAGGTTTCCATTTTGAGACA+GGG | + | 51712:5143-5162 | MS.gene25680:intergenic | 35.0% |
| !!! | TTAGGTTTCCATTTTGAGAC+AGG | + | 51712:5144-5163 | MS.gene25680:intergenic | 35.0% |
| !!! | TTTCATTTTTGGTAGTAGCC+AGG | - | 51712:4578-4597 | MS.gene25680:intron | 35.0% |
| AAAATTACTAAACGCACCCC+CGG | + | 51712:2977-2996 | MS.gene25679:intergenic | 40.0% | |
| ACAAACGCAACTTATCATGC+AGG | + | 51712:3809-3828 | MS.gene25680:intergenic | 40.0% | |
| ACAGTCTCAAGCTTCTAATG+TGG | - | 51712:5801-5820 | MS.gene25680:intron | 40.0% | |
| AGAAAATGGACGGGGTTAAA+TGG | - | 51712:3347-3366 | MS.gene25680:CDS | 40.0% | |
| AGTTGAAACCCTGACTAAGA+TGG | - | 51712:4888-4907 | MS.gene25680:intron | 40.0% | |
| ATCAGCCCATTTGACAACTA+AGG | + | 51712:5743-5762 | MS.gene25680:intergenic | 40.0% | |
| ATGATGCCTCACATGAATCA+AGG | - | 51712:6159-6178 | MS.gene25680:intron | 40.0% | |
| ATGCACAACCTACTACAACA+TGG | + | 51712:4437-4456 | MS.gene25680:intergenic | 40.0% | |
| CAGTATATTGGACCTTCAAG+CGG | - | 51712:5023-5042 | MS.gene25680:intron | 40.0% | |
| CAGTCTCAAGCTTCTAATGT+GGG | - | 51712:5802-5821 | MS.gene25680:intron | 40.0% | |
| CCGAACCTTAAATTAGGCTA+AGG | - | 51712:6770-6789 | MS.gene25680:intron | 40.0% | |
| GAATTGTGGTCTGGAAAACA+CGG | - | 51712:3614-3633 | MS.gene25680:intron | 40.0% | |
| GCACTCAAAACTCTACCAAA+TGG | + | 51712:6953-6972 | MS.gene25680:intergenic | 40.0% | |
| GCATTTCCTTGATTCATGTG+AGG | + | 51712:6168-6187 | MS.gene25680:intergenic | 40.0% | |
| GCTAATGCCTTTCAACCATT+TGG | - | 51712:6935-6954 | MS.gene25680:CDS | 40.0% | |
| GGTTCTCAACAGACAAGTAA+AGG | - | 51712:4320-4339 | MS.gene25680:intron | 40.0% | |
| GTCCTATACAAGCCATTGTA+GGG | + | 51712:5180-5199 | MS.gene25680:intergenic | 40.0% | |
| GTGAAACACTAGGGTATATG+GGG | + | 51712:3243-3262 | MS.gene25680:intergenic | 40.0% | |
| GTGTTCCCTTAGTTGTCAAA+TGG | - | 51712:5734-5753 | MS.gene25680:intron | 40.0% | |
| GTTCCTCCATATAACGGTTA+TGG | - | 51712:5874-5893 | MS.gene25680:intron | 40.0% | |
| GTTCCTTGTATGTGGTAGAA+TGG | - | 51712:4948-4967 | MS.gene25680:intron | 40.0% | |
| TAGATAAACAGATTTGCGCC+AGG | + | 51712:6881-6900 | MS.gene25680:intergenic | 40.0% | |
| TAGCCATAACCGTTATATGG+AGG | + | 51712:5880-5899 | MS.gene25680:intergenic | 40.0% | |
| TATGGAGGAACATAACCCAT+AGG | + | 51712:5865-5884 | MS.gene25680:intergenic | 40.0% | |
| TCAGCCCATTTGACAACTAA+GGG | + | 51712:5742-5761 | MS.gene25680:intergenic | 40.0% | |
| TCATCTTCCGTCATGTGTTT+CGG | + | 51712:2686-2705 | MS.gene25680:intergenic | 40.0% | |
| TCTCCATTCTACCACATACA+AGG | + | 51712:4954-4973 | MS.gene25680:intergenic | 40.0% | |
| TCTGCATACTTCACTTGCAA+TGG | + | 51712:4037-4056 | MS.gene25680:intergenic | 40.0% | |
| TGAAACACTAGGGTATATGG+GGG | + | 51712:3242-3261 | MS.gene25680:intergenic | 40.0% | |
| TGGTCCCTTAGCCTAATTTA+AGG | + | 51712:6778-6797 | MS.gene25680:intergenic | 40.0% | |
| TGTCCTATACAAGCCATTGT+AGG | + | 51712:5181-5200 | MS.gene25680:intergenic | 40.0% | |
| TTGAATGGACGACAGTACTA+TGG | + | 51712:5974-5993 | MS.gene25680:intergenic | 40.0% | |
| TTGACTGAAACAGTGCACAA+AGG | + | 51712:5380-5399 | MS.gene25680:intergenic | 40.0% | |
| TTGCAAGTGAAGTATGCAGA+TGG | - | 51712:4037-4056 | MS.gene25680:intron | 40.0% | |
| ! | ATTATTTGGAGCCATGCCTA+TGG | - | 51712:5846-5865 | MS.gene25680:intron | 40.0% |
| ! | ATTTTCTCTTGATAGGCTCC+TGG | - | 51712:6072-6091 | MS.gene25680:intron | 40.0% |
| ! | CAATGGAAAGCACAAAATGG+AGG | - | 51712:4506-4525 | MS.gene25680:intron | 40.0% |
| ! | CAGTGTTCTAAACAAAGCCT+TGG | + | 51712:3907-3926 | MS.gene25680:intergenic | 40.0% |
| ! | GCCTAATTTAAGGTTCGGTT+TGG | + | 51712:6768-6787 | MS.gene25680:intergenic | 40.0% |
| ! | TAAGAGCCAACATAACTTGC+AGG | + | 51712:6243-6262 | MS.gene25680:intergenic | 40.0% |
| ! | TAAGTTTAGTGGCGGAATTG+TGG | - | 51712:3600-3619 | MS.gene25680:intron | 40.0% |
| ! | TATTTTCACTTAGGACCACC+TGG | - | 51712:6860-6879 | MS.gene25680:CDS | 40.0% |
| ! | TCATGTGAGGCATCATATTG+TGG | + | 51712:6155-6174 | MS.gene25680:intergenic | 40.0% |
| ! | TCTGCACTTTTCTCCAAGTA+TGG | - | 51712:4269-4288 | MS.gene25680:intron | 40.0% |
| ! | TTATTTGGAGCCATGCCTAT+GGG | - | 51712:5847-5866 | MS.gene25680:intron | 40.0% |
| ! | TTCCCTACAATGGCTTGTAT+AGG | - | 51712:5175-5194 | MS.gene25680:intron | 40.0% |
| ! | TTCTAGAGATGAAGCCGATA+AGG | - | 51712:2919-2938 | MS.gene25680:intron | 40.0% |
| !! | CAAATGGGCTGATACTGAAA+AGG | - | 51712:5750-5769 | MS.gene25680:intron | 40.0% |
| !! | TAACCAGGTTGATTCTGCAT+TGG | + | 51712:6132-6151 | MS.gene25680:intergenic | 40.0% |
| !! | TCAAGTACCGAAACACATGA+CGG | - | 51712:2676-2695 | MS.gene25680:CDS | 40.0% |
| !! | TGAAGACTAGTTTGCCAAGA+GGG | + | 51712:5524-5543 | MS.gene25680:intergenic | 40.0% |
| !! | TTATCGGCTTCATCTCTAGA+AGG | + | 51712:2920-2939 | MS.gene25680:intergenic | 40.0% |
| !!! | TGCTTTTGGTTCCTTGTATG+TGG | - | 51712:4940-4959 | MS.gene25680:intron | 40.0% |
| AAAATGGAGCGTGGCCTATA+TGG | + | 51712:3770-3789 | MS.gene25679:intergenic | 45.0% | |
| ACTGTGCTTTCTGAGCTCTT+CGG | + | 51712:5786-5805 | MS.gene25680:intergenic | 45.0% | |
| AGACCTTTGAATAGTCCTCC+TGG | - | 51712:6321-6340 | MS.gene25680:intron | 45.0% | |
| AGGAACATAACCCATAGGCA+TGG | + | 51712:5860-5879 | MS.gene25680:intergenic | 45.0% | |
| ATAAACAGATTTGCGCCAGG+TGG | + | 51712:6878-6897 | MS.gene25680:intergenic | 45.0% | |
| ATTCCTCCAGGATATGCCAT+TGG | + | 51712:6291-6310 | MS.gene25680:intergenic | 45.0% | |
| CAACATCCAATGGCATATCC+TGG | - | 51712:6282-6301 | MS.gene25680:intron | 45.0% | |
| CCTGACTAAGATGGCATGAA+CGG | - | 51712:4897-4916 | MS.gene25680:intron | 45.0% | |
| CGTTCATGCCATCTTAGTCA+GGG | + | 51712:4899-4918 | MS.gene25680:intergenic | 45.0% | |
| CTTGGACTAATCATTCCTCC+AGG | + | 51712:6303-6322 | MS.gene25680:intergenic | 45.0% | |
| GAACCAGGAGGACTATTCAA+AGG | + | 51712:6327-6346 | MS.gene25680:intergenic | 45.0% | |
| GATAGGCTCCTGGAAGTTAT+GGG | - | 51712:6082-6101 | MS.gene25680:intron | 45.0% | |
| GCACAAAGGTTTGTGTGCAT+GGG | + | 51712:5366-5385 | MS.gene25680:intergenic | 45.0% | |
| GCTCGAACTTGATCCAAGTT+TGG | - | 51712:5249-5268 | MS.gene25680:intron | 45.0% | |
| GGAAAGGGAAAATCAAGCTC+TGG | - | 51712:5270-5289 | MS.gene25680:intron | 45.0% | |
| GGAGGACTATTCAAAGGTCT+TGG | + | 51712:6321-6340 | MS.gene25680:intergenic | 45.0% | |
| GGCATCATATTGTGGTAACC+AGG | + | 51712:6147-6166 | MS.gene25680:intergenic | 45.0% | |
| GGCATGGCTCCAAATAATGA+AGG | + | 51712:5844-5863 | MS.gene25680:intergenic | 45.0% | |
| TAACTGGCAGGTGTCCATAT+AGG | - | 51712:3753-3772 | MS.gene25680:CDS | 45.0% | |
| TAGGACATTGTTCCACACCT+AGG | - | 51712:5194-5213 | MS.gene25680:intron | 45.0% | |
| TAGGGAACAAACCCACCATT+AGG | + | 51712:5162-5181 | MS.gene25680:intergenic | 45.0% | |
| TCAGGGTCCAGCAAAAATTC+TGG | - | 51712:6387-6406 | MS.gene25680:intron | 45.0% | |
| TCCAGCAAAAATTCTGGTGG+TGG | - | 51712:6393-6412 | MS.gene25680:intron | 45.0% | |
| TGATAGGCTCCTGGAAGTTA+TGG | - | 51712:6081-6100 | MS.gene25680:intron | 45.0% | |
| TGCACAAAGGTTTGTGTGCA+TGG | + | 51712:5367-5386 | MS.gene25680:intergenic | 45.0% | |
| TGTCTTGTGTTTGCATGACC+TGG | - | 51712:5591-5610 | MS.gene25680:intron | 45.0% | |
| ! | ACACGCATTAACGGCCTTAT+CGG | + | 51712:2936-2955 | MS.gene25680:intergenic | 45.0% |
| ! | ACCACCACCAGAATTTTTGC+TGG | + | 51712:6397-6416 | MS.gene25680:intergenic | 45.0% |
| ! | ACGGTGTTTGTGCCAGTTTT+AGG | + | 51712:6697-6716 | MS.gene25680:intergenic | 45.0% |
| ! | AGAACAAGCTCTTGCTGCTT+TGG | - | 51712:4476-4495 | MS.gene25680:intron | 45.0% |
| ! | AGCAGCAAGAGCTTGTTCTT+TGG | + | 51712:4475-4494 | MS.gene25680:intergenic | 45.0% |
| ! | CGGTGTTTGTGCCAGTTTTA+GGG | + | 51712:6696-6715 | MS.gene25680:intergenic | 45.0% |
| ! | GATGGCGAGTTGGAAAGATT+AGG | - | 51712:4055-4074 | MS.gene25680:intron | 45.0% |
| ! | GGAAAGCACAAAATGGAGGT+TGG | - | 51712:4510-4529 | MS.gene25680:intron | 45.0% |
| ! | GGAGGCACATGATAGTTTCT+AGG | + | 51712:6222-6241 | MS.gene25680:intergenic | 45.0% |
| !! | CGTGTTAGTTCTACTAGGCT+GGG | - | 51712:3400-3419 | MS.gene25680:CDS | 45.0% |
| !! | GCTGTTAACTAGTGCTGATG+TGG | - | 51712:6633-6652 | MS.gene25680:intron | 45.0% |
| !! | GTGAAGACTAGTTTGCCAAG+AGG | + | 51712:5525-5544 | MS.gene25680:intergenic | 45.0% |
| !! | TCGTGTTAGTTCTACTAGGC+TGG | - | 51712:3399-3418 | MS.gene25680:CDS | 45.0% |
| AACGGGGTAAAACCTAGGTG+TGG | + | 51712:5209-5228 | MS.gene25680:intergenic | 50.0% | |
| AATGCATTGCGGCCAGATCT+CGG | - | 51712:6183-6202 | MS.gene25680:intron | 50.0% | |
| ATAGAAGGCAAGTGGGCAAC+AGG | - | 51712:4682-4701 | MS.gene25680:intron | 50.0% | |
| CATCCAATGGCATATCCTGG+AGG | - | 51712:6285-6304 | MS.gene25680:intron | 50.0% | |
| CCACCAATGCAGAATCAACC+TGG | - | 51712:6126-6145 | MS.gene25680:intron | 50.0% | |
| CCGTTCATGCCATCTTAGTC+AGG | + | 51712:4900-4919 | MS.gene25680:intergenic | 50.0% | |
| CTGTGCTTTCTGAGCTCTTC+GGG | + | 51712:5785-5804 | MS.gene25680:intergenic | 50.0% | |
| GAAGGTGAAACAGAACCAGG+AGG | + | 51712:6339-6358 | MS.gene25680:intergenic | 50.0% | |
| GAAGTATGCAGATGGCGAGT+TGG | - | 51712:4045-4064 | MS.gene25680:intron | 50.0% | |
| GCAACTCCGCTACATCATCA+GGG | - | 51712:6370-6389 | MS.gene25680:intron | 50.0% | |
| GCCAGGGTTACAACATCCAA+TGG | - | 51712:6272-6291 | MS.gene25680:intron | 50.0% | |
| GCCATTGGATGTTGTAACCC+TGG | + | 51712:6276-6295 | MS.gene25680:intergenic | 50.0% | |
| GGGTCCAGCAAAAATTCTGG+TGG | - | 51712:6390-6409 | MS.gene25680:intron | 50.0% | |
| GTGCCTCCTGCAAGTTATGT+TGG | - | 51712:6234-6253 | MS.gene25680:intron | 50.0% | |
| GTTTCACCTTCCGGTGGAAA+TGG | - | 51712:6348-6367 | MS.gene25680:intron | 50.0% | |
| TTCATATTGGGGCCGAGATC+TGG | + | 51712:6198-6217 | MS.gene25680:intergenic | 50.0% | |
| ! | GAGCCAACATAACTTGCAGG+AGG | + | 51712:6240-6259 | MS.gene25680:intergenic | 50.0% |
| ! | GGTGGGTTTGTTCCCTACAA+TGG | - | 51712:5165-5184 | MS.gene25680:CDS | 50.0% |
| ! | GGTTGATTCTGCATTGGTGG+CGG | + | 51712:6126-6145 | MS.gene25680:intergenic | 50.0% |
| ! | TGTGACTGAATGCCGCTTGA+AGG | + | 51712:5038-5057 | MS.gene25680:intergenic | 50.0% |
| ! | TTAGTGGCGGAATTGTGGTC+TGG | - | 51712:3605-3624 | MS.gene25680:intron | 50.0% |
| !! | ACAAGCTCTTGCTGCTTTGG+AGG | - | 51712:4479-4498 | MS.gene25680:intron | 50.0% |
| !! | CCAGGTTGATTCTGCATTGG+TGG | + | 51712:6129-6148 | MS.gene25680:intergenic | 50.0% |
| !! | CCTGGTTCTGTTTCACCTTC+CGG | - | 51712:6339-6358 | MS.gene25680:intron | 50.0% |
| !! | GCTGCTTTGGAGGCAATCAA+TGG | - | 51712:4489-4508 | MS.gene25680:intron | 50.0% |
| AAAGCTACACGCGCTTCTCG+AGG | - | 51712:2764-2783 | MS.gene25680:intron | 55.0% | |
| CCGGAAGGTGAAACAGAACC+AGG | + | 51712:6342-6361 | MS.gene25680:intergenic | 55.0% | |
| GCTCTTATCCTGCTGTGCCA+GGG | - | 51712:6256-6275 | MS.gene25680:intron | 55.0% | |
| GGCAACTCCGCTACATCATC+AGG | - | 51712:6369-6388 | MS.gene25680:intron | 55.0% | |
| GGCATGAGCCCATAACTTCC+AGG | + | 51712:6093-6112 | MS.gene25680:intergenic | 55.0% | |
| GGTTCTGTTTCACCTTCCGG+TGG | - | 51712:6342-6361 | MS.gene25680:intron | 55.0% | |
| TGTTGTAACCCTGGCACAGC+AGG | + | 51712:6267-6286 | MS.gene25680:intergenic | 55.0% | |
| ! | AGCGGAGTTGCCATTTCCAC+CGG | + | 51712:6361-6380 | MS.gene25680:intergenic | 55.0% |
| ! | GAGTTGCCATTTCCACCGGA+AGG | + | 51712:6357-6376 | MS.gene25680:intergenic | 55.0% |
| ! | GCTGGACCCTGATGATGTAG+CGG | + | 51712:6379-6398 | MS.gene25680:intergenic | 55.0% |
| !! | TCTGGTGGTGGTCAAGCTGA+AGG | - | 51712:6405-6424 | MS.gene25680:intron | 55.0% |
| GGCTCTTATCCTGCTGTGCC+AGG | - | 51712:6255-6274 | MS.gene25680:intron | 60.0% | |
| !! | ATTGGTGGCGGCATGCGGTA+CGG | + | 51712:6114-6133 | MS.gene25680:intergenic | 60.0% |
| !! | TCTGCATTGGTGGCGGCATG+CGG | + | 51712:6119-6138 | MS.gene25680:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 51712 | gene | 2614 | 7016 | 2614 | ID=MS.gene25680 |
| 51712 | mRNA | 2614 | 7016 | 2614 | ID=MS.gene25680.t1;Parent=MS.gene25680 |
| 51712 | exon | 6845 | 7016 | 6845 | ID=MS.gene25680.t1.exon1;Parent=MS.gene25680.t1 |
| 51712 | CDS | 6845 | 7016 | 6845 | ID=cds.MS.gene25680.t1;Parent=MS.gene25680.t1 |
| 51712 | exon | 6651 | 6733 | 6651 | ID=MS.gene25680.t1.exon2;Parent=MS.gene25680.t1 |
| 51712 | CDS | 6651 | 6733 | 6651 | ID=cds.MS.gene25680.t1;Parent=MS.gene25680.t1 |
| 51712 | exon | 5554 | 5605 | 5554 | ID=MS.gene25680.t1.exon3;Parent=MS.gene25680.t1 |
| 51712 | CDS | 5554 | 5605 | 5554 | ID=cds.MS.gene25680.t1;Parent=MS.gene25680.t1 |
| 51712 | exon | 5289 | 5414 | 5289 | ID=MS.gene25680.t1.exon4;Parent=MS.gene25680.t1 |
| 51712 | CDS | 5289 | 5414 | 5289 | ID=cds.MS.gene25680.t1;Parent=MS.gene25680.t1 |
| 51712 | exon | 5103 | 5185 | 5103 | ID=MS.gene25680.t1.exon5;Parent=MS.gene25680.t1 |
| 51712 | CDS | 5103 | 5185 | 5103 | ID=cds.MS.gene25680.t1;Parent=MS.gene25680.t1 |
| 51712 | exon | 3727 | 3903 | 3727 | ID=MS.gene25680.t1.exon6;Parent=MS.gene25680.t1 |
| 51712 | CDS | 3727 | 3903 | 3727 | ID=cds.MS.gene25680.t1;Parent=MS.gene25680.t1 |
| 51712 | exon | 3204 | 3543 | 3204 | ID=MS.gene25680.t1.exon7;Parent=MS.gene25680.t1 |
| 51712 | CDS | 3204 | 3543 | 3204 | ID=cds.MS.gene25680.t1;Parent=MS.gene25680.t1 |
| 51712 | exon | 2614 | 2757 | 2614 | ID=MS.gene25680.t1.exon8;Parent=MS.gene25680.t1 |
| 51712 | CDS | 2614 | 2757 | 2614 | ID=cds.MS.gene25680.t1;Parent=MS.gene25680.t1 |
| Gene Sequence |
| Protein sequence |
