Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27967.t1 | XP_003630015.1 | 88.9 | 594 | 66 | 0 | 6 | 599 | 11 | 604 | 3.70E-304 | 1053.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27967.t1 | Q84MA5 | 66.9 | 593 | 186 | 1 | 5 | 597 | 8 | 590 | 8.2e-228 | 791.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27967.t1 | G7L9L7 | 88.9 | 594 | 66 | 0 | 6 | 599 | 11 | 604 | 2.7e-304 | 1053.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene042491 | MS.gene27967 | PPI |
| MS.gene27967 | MS.gene08137 | PPI |
| MS.gene041367 | MS.gene27967 | PPI |
| MS.gene47297 | MS.gene27967 | PPI |
| MS.gene08148 | MS.gene27967 | PPI |
| MS.gene49831 | MS.gene27967 | PPI |
| MS.gene41790 | MS.gene27967 | PPI |
| MS.gene27967 | MS.gene32277 | PPI |
| MS.gene27967 | MS.gene073450 | PPI |
| MS.gene007812 | MS.gene27967 | PPI |
| MS.gene007811 | MS.gene27967 | PPI |
| MS.gene042480 | MS.gene27967 | PPI |
| MS.gene41795 | MS.gene27967 | PPI |
| MS.gene41792 | MS.gene27967 | PPI |
| MS.gene27967 | MS.gene00402 | PPI |
| MS.gene27967 | MS.gene08144 | PPI |
| MS.gene38965 | MS.gene27967 | PPI |
| MS.gene38964 | MS.gene27967 | PPI |
| MS.gene58674 | MS.gene27967 | PPI |
| MS.gene032361 | MS.gene27967 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27967.t1 | MTR_8g089320 | 88.851 | 592 | 66 | 0 | 8 | 599 | 13 | 604 | 0.0 | 1079 |
| MS.gene27967.t1 | MTR_8g089360 | 73.519 | 574 | 148 | 3 | 16 | 589 | 9 | 578 | 0.0 | 861 |
| MS.gene27967.t1 | MTR_8g089360 | 73.519 | 574 | 148 | 3 | 16 | 589 | 26 | 595 | 0.0 | 860 |
| MS.gene27967.t1 | MTR_8g089340 | 85.249 | 461 | 67 | 1 | 144 | 603 | 1 | 461 | 0.0 | 774 |
| MS.gene27967.t1 | MTR_1g030660 | 65.455 | 550 | 189 | 1 | 23 | 572 | 23 | 571 | 0.0 | 757 |
| MS.gene27967.t1 | MTR_2g035430 | 56.048 | 587 | 253 | 1 | 1 | 582 | 1 | 587 | 0.0 | 695 |
| MS.gene27967.t1 | MTR_8g461380 | 51.250 | 560 | 271 | 2 | 14 | 572 | 26 | 584 | 0.0 | 577 |
| MS.gene27967.t1 | MTR_1g111740 | 43.805 | 573 | 305 | 4 | 23 | 583 | 6 | 573 | 4.00e-156 | 461 |
| MS.gene27967.t1 | MTR_4g099270 | 41.199 | 534 | 299 | 6 | 46 | 569 | 1 | 529 | 5.49e-128 | 387 |
| MS.gene27967.t1 | MTR_4g099270 | 44.670 | 394 | 212 | 3 | 29 | 418 | 5 | 396 | 3.14e-109 | 333 |
| MS.gene27967.t1 | MTR_4g099270 | 39.336 | 422 | 241 | 6 | 158 | 569 | 1 | 417 | 2.28e-90 | 286 |
| MS.gene27967.t1 | MTR_4g099270 | 44.884 | 303 | 163 | 2 | 29 | 327 | 5 | 307 | 7.95e-86 | 270 |
| MS.gene27967.t1 | MTR_6g027630 | 34.988 | 423 | 261 | 4 | 29 | 441 | 6 | 424 | 1.38e-76 | 254 |
| MS.gene27967.t1 | MTR_8g089342 | 91.803 | 122 | 10 | 0 | 12 | 133 | 18 | 139 | 2.12e-76 | 239 |
| MS.gene27967.t1 | MTR_6g027630 | 34.988 | 423 | 261 | 4 | 29 | 441 | 6 | 424 | 3.42e-76 | 254 |
| MS.gene27967.t1 | MTR_6g027680 | 33.886 | 422 | 266 | 3 | 27 | 441 | 12 | 427 | 6.66e-74 | 247 |
| MS.gene27967.t1 | MTR_6g027660 | 33.796 | 432 | 267 | 5 | 20 | 441 | 3 | 425 | 1.47e-73 | 248 |
| MS.gene27967.t1 | MTR_7g086510 | 35.980 | 403 | 247 | 4 | 46 | 441 | 21 | 419 | 6.85e-72 | 243 |
| MS.gene27967.t1 | MTR_6g027650 | 33.412 | 425 | 258 | 5 | 29 | 441 | 6 | 417 | 1.20e-71 | 242 |
| MS.gene27967.t1 | MTR_7g086610 | 37.076 | 383 | 232 | 3 | 67 | 441 | 32 | 413 | 1.69e-71 | 242 |
| MS.gene27967.t1 | MTR_6g034535 | 43.284 | 268 | 136 | 5 | 323 | 577 | 49 | 313 | 5.77e-70 | 229 |
| MS.gene27967.t1 | MTR_6g034535 | 42.708 | 96 | 30 | 1 | 93 | 188 | 19 | 89 | 4.13e-15 | 77.0 |
| MS.gene27967.t1 | MTR_7g007850 | 29.942 | 521 | 343 | 8 | 60 | 566 | 42 | 554 | 8.57e-66 | 225 |
| MS.gene27967.t1 | MTR_7g007850 | 28.131 | 551 | 344 | 8 | 60 | 566 | 42 | 584 | 2.10e-61 | 214 |
| MS.gene27967.t1 | MTR_7g007850 | 32.474 | 388 | 255 | 4 | 60 | 441 | 42 | 428 | 4.47e-57 | 200 |
| MS.gene27967.t1 | MTR_7g007850 | 32.474 | 388 | 255 | 4 | 60 | 441 | 42 | 428 | 6.91e-57 | 201 |
| MS.gene27967.t1 | MTR_6g027630 | 34.211 | 342 | 212 | 3 | 110 | 441 | 1 | 339 | 9.71e-56 | 197 |
| MS.gene27967.t1 | MTR_6g027670 | 34.810 | 158 | 103 | 0 | 284 | 441 | 1 | 158 | 2.27e-27 | 112 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27967.t1 | AT4G21120 | 66.723 | 595 | 188 | 1 | 5 | 599 | 8 | 592 | 0.0 | 829 |
| MS.gene27967.t1 | AT2G34960 | 58.333 | 564 | 233 | 2 | 4 | 566 | 1 | 563 | 0.0 | 680 |
| MS.gene27967.t1 | AT4G21120 | 64.667 | 450 | 149 | 1 | 148 | 597 | 1 | 440 | 0.0 | 602 |
| MS.gene27967.t1 | AT1G17120 | 53.309 | 559 | 260 | 1 | 8 | 566 | 22 | 579 | 0.0 | 590 |
| MS.gene27967.t1 | AT5G04770 | 41.591 | 553 | 303 | 5 | 25 | 562 | 15 | 562 | 7.07e-144 | 429 |
| MS.gene27967.t1 | AT3G10600 | 40.708 | 565 | 305 | 7 | 22 | 566 | 11 | 565 | 1.16e-142 | 426 |
| MS.gene27967.t1 | AT5G04770 | 42.708 | 384 | 210 | 2 | 25 | 398 | 15 | 398 | 3.82e-105 | 323 |
| MS.gene27967.t1 | AT3G10600 | 39.161 | 429 | 231 | 7 | 158 | 566 | 1 | 419 | 1.50e-98 | 307 |
| MS.gene27967.t1 | AT5G04770 | 40.000 | 420 | 232 | 5 | 158 | 562 | 1 | 415 | 9.63e-94 | 295 |
| MS.gene27967.t1 | AT5G36940 | 35.751 | 386 | 235 | 4 | 66 | 441 | 28 | 410 | 7.92e-73 | 245 |
| MS.gene27967.t1 | AT3G03720 | 33.666 | 401 | 257 | 3 | 48 | 441 | 7 | 405 | 2.82e-70 | 238 |
| MS.gene27967.t1 | AT1G58030 | 33.763 | 388 | 244 | 4 | 64 | 441 | 37 | 421 | 6.37e-67 | 230 |
| MS.gene27967.t1 | AT1G05940 | 28.164 | 561 | 373 | 7 | 40 | 583 | 21 | 568 | 8.29e-64 | 220 |
| MS.gene27967.t1 | AT1G05940 | 28.738 | 515 | 344 | 6 | 40 | 537 | 21 | 529 | 4.30e-60 | 209 |
| MS.gene27967.t1 | AT1G05940 | 30.679 | 427 | 283 | 4 | 59 | 473 | 40 | 465 | 6.45e-59 | 205 |
| MS.gene27967.t1 | AT1G05940 | 27.093 | 454 | 303 | 5 | 146 | 583 | 9 | 450 | 2.33e-42 | 159 |
Find 145 sgRNAs with CRISPR-Local
Find 174 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GACATTCCTATTGGTCTTAT+TGG | 0.099434 | 4.4:+11931206 | MS.gene27967:CDS |
| CAATTGGAATTTCAGCTTAT+TGG | 0.122057 | 4.4:+11931723 | MS.gene27967:CDS |
| GTGTGTCTTGTGTTGATTAT+TGG | 0.196899 | 4.4:+11931695 | MS.gene27967:CDS |
| GTTATTAACTTATTCCTTCT+TGG | 0.197082 | 4.4:+11931896 | MS.gene27967:CDS |
| TATTCTCAGTTTACACCTTT+TGG | 0.204722 | 4.4:+11931083 | MS.gene27967:CDS |
| CTTGTATACTATGTGCTATT+AGG | 0.206726 | 4.4:+11931971 | MS.gene27967:CDS |
| AATTGGAATTTCAGCTTATT+GGG | 0.231227 | 4.4:+11931724 | MS.gene27967:CDS |
| GCTTGTGGCCTTAGCACTTT+TGG | 0.268638 | 4.4:+11931616 | MS.gene27967:CDS |
| GGGGAGTTCCTTTGGTTCCT+TGG | 0.281218 | 4.4:+11931855 | MS.gene27967:CDS |
| TTGATAGAAAATCGTATATA+AGG | 0.283159 | 4.4:+11931924 | MS.gene27967:CDS |
| ACTATTATACGGAAATAGTT+AGG | 0.294212 | 4.4:-11930873 | None:intergenic |
| CATAACATGAACCCTGATTA+TGG | 0.301559 | 4.4:+11930897 | MS.gene27967:CDS |
| TTGTATACTATGTGCTATTA+GGG | 0.303775 | 4.4:+11931972 | MS.gene27967:CDS |
| TCATGTTATGAACTATTATA+CGG | 0.324528 | 4.4:-11930884 | None:intergenic |
| TGCGGAGCTGGTGGAGATTA+AGG | 0.326488 | 4.4:+11930283 | MS.gene27967:CDS |
| TGGCAAAGAAGCCTAAATTA+TGG | 0.332142 | 4.4:+11931834 | MS.gene27967:CDS |
| CTTCTCTTCATAGTAATTGC+TGG | 0.335458 | 4.4:+11931035 | MS.gene27967:CDS |
| AAAGGAACTCCCCATAATTT+AGG | 0.346807 | 4.4:-11931845 | None:intergenic |
| AGGTCAAGATGGCCATAATC+AGG | 0.355588 | 4.4:-11930909 | None:intergenic |
| TAAATTATGGGGAGTTCCTT+TGG | 0.356075 | 4.4:+11931847 | MS.gene27967:CDS |
| CGTATATAAGGTTTGCGGTT+TGG | 0.357696 | 4.4:+11931936 | MS.gene27967:CDS |
| GCCAAGTACATTATTTCATT+AGG | 0.357842 | 4.4:+11931356 | MS.gene27967:CDS |
| CTGAGAATAGTTCTCGGGTT+TGG | 0.377128 | 4.4:-11931069 | None:intergenic |
| GGCTAGGGAGCAAGCAGGTC+CGG | 0.379687 | 4.4:+11930412 | MS.gene27967:CDS |
| AGAGCCTTTAGTGCTGTAAA+TGG | 0.380012 | 4.4:-11930970 | None:intergenic |
| TTCCATTGCTTCTCAACCTC+CGG | 0.382100 | 4.4:-11932058 | None:intergenic |
| ATACTCAAGGAGGATGTTCC+CGG | 0.387864 | 4.4:-11930784 | None:intergenic |
| GGCAAAGAAGCCTAAATTAT+GGG | 0.393362 | 4.4:+11931835 | MS.gene27967:CDS |
| ATTGAGATTGTAGCATTCAT+AGG | 0.394274 | 4.4:-11931506 | None:intergenic |
| TCAAGTGGGGTAACTACAAA+AGG | 0.399563 | 4.4:+11931653 | MS.gene27967:CDS |
| ATTGGTTCAGTTGTCGGGTC+TGG | 0.399959 | 4.4:+11930365 | MS.gene27967:CDS |
| TGGTGGGACTTGATGTGGTT+TGG | 0.403047 | 4.4:+11930341 | MS.gene27967:CDS |
| TTGGCATTGGTTCAGTTGTC+GGG | 0.404173 | 4.4:+11930360 | MS.gene27967:CDS |
| TTGATTATTGGATCTTCAAT+TGG | 0.407894 | 4.4:+11931707 | MS.gene27967:CDS |
| AGGGAGATGGCAACAGTTGA+TGG | 0.415607 | 4.4:+11930119 | None:intergenic |
| TAGTGCTGTTGGAATGGATT+GGG | 0.417491 | 4.4:+11931334 | MS.gene27967:CDS |
| AATTTAGGCTTCTTTGCCAT+TGG | 0.418140 | 4.4:-11931830 | None:intergenic |
| ATACATATCAAGTTATCAAT+TGG | 0.420768 | 4.4:-11932131 | None:intergenic |
| TCTTGACCTTGTTGCTGTTG+TGG | 0.421701 | 4.4:+11930923 | MS.gene27967:CDS |
| TTTGGCATTGGTTCAGTTGT+CGG | 0.423683 | 4.4:+11930359 | MS.gene27967:CDS |
| AGATGAAGAAGACGCTGAAT+TGG | 0.426669 | 4.4:+11930321 | MS.gene27967:CDS |
| GCTGTGGAAATACCTGTTGC+AGG | 0.427756 | 4.4:+11930503 | MS.gene27967:CDS |
| GCTCTTGTTGATGAAAGAAC+AGG | 0.435974 | 4.4:+11931479 | MS.gene27967:CDS |
| ATAAGGTTTGCGGTTTGGAC+AGG | 0.438702 | 4.4:+11931941 | MS.gene27967:CDS |
| GACTTGATGTGGTTTGGCAT+TGG | 0.438927 | 4.4:+11930347 | MS.gene27967:CDS |
| ATTGAGCCAATAAGACCAAT+AGG | 0.439105 | 4.4:-11931212 | None:intergenic |
| AACTGTGAGCATGGATGGAT+TGG | 0.445839 | 4.4:+11931749 | MS.gene27967:CDS |
| GTGTTGTCCTTTGTCGTCTC+CGG | 0.450135 | 4.4:+11930440 | MS.gene27967:CDS |
| GATGTTCCCGGCCGCTATAA+AGG | 0.452892 | 4.4:-11930772 | None:intergenic |
| GGAGGAGTCGTTTAAGAGTT+GGG | 0.454594 | 4.4:+11930187 | MS.gene27967:CDS |
| CTTGCCATTTACAGCACTAA+AGG | 0.456544 | 4.4:+11930966 | MS.gene27967:CDS |
| TAATTATAATTACCTGCAAC+AGG | 0.459094 | 4.4:-11930515 | None:intergenic |
| GCACTAAAAGCAACAGAGAA+AGG | 0.459176 | 4.4:-11931317 | None:intergenic |
| TTTGTTTATCTTTATGCTTG+TGG | 0.460284 | 4.4:+11931601 | MS.gene27967:CDS |
| CGGAGGAGTCGTTTAAGAGT+TGG | 0.463490 | 4.4:+11930186 | MS.gene27967:CDS |
| ACCTAATGAAATAATGTACT+TGG | 0.470231 | 4.4:-11931357 | None:intergenic |
| TTAGTGCTGTTGGAATGGAT+TGG | 0.470694 | 4.4:+11931333 | MS.gene27967:CDS |
| TGCTTACCGGACTTGAGGCT+AGG | 0.472425 | 4.4:+11930396 | MS.gene27967:CDS |
| CCTGGTAGAGACATTCCTAT+TGG | 0.474972 | 4.4:+11931197 | MS.gene27967:CDS |
| AGATAACAAAGCGGAGATAC+CGG | 0.475452 | 4.4:-11930459 | None:intergenic |
| CTATTATACGGAAATAGTTA+GGG | 0.475715 | 4.4:-11930872 | None:intergenic |
| CAACTCTTAAACGACTCCTC+CGG | 0.477205 | 4.4:-11930185 | None:intergenic |
| TGCTAGTAAGCAATATATTA+CGG | 0.478001 | 4.4:-11931246 | None:intergenic |
| ACATAGCAGTGGTTCTGATC+CGG | 0.487510 | 4.4:+11932039 | MS.gene27967:CDS |
| AACTCTTAAACGACTCCTCC+GGG | 0.489247 | 4.4:-11930184 | None:intergenic |
| ATCCACTGATCATGCGGAGC+TGG | 0.490160 | 4.4:+11930271 | MS.gene27967:CDS |
| CACTGATCATGCGGAGCTGG+TGG | 0.500362 | 4.4:+11930274 | MS.gene27967:CDS |
| AAACGATCCTTCAACCGAAA+AGG | 0.503749 | 4.4:-11930239 | None:intergenic |
| AGTTGAGCTAGGAGACTTTG+TGG | 0.506976 | 4.4:+11930749 | MS.gene27967:CDS |
| ACGCCGCCGTAGCACGATCA+TGG | 0.508863 | 4.4:+11930817 | MS.gene27967:CDS |
| AAAATCGTATATAAGGTTTG+CGG | 0.509479 | 4.4:+11931931 | MS.gene27967:CDS |
| CCAATAGGAATGTCTCTACC+AGG | 0.509969 | 4.4:-11931197 | None:intergenic |
| TTCTATCAATAGATCCAAGA+AGG | 0.516981 | 4.4:-11931910 | None:intergenic |
| CAGTTGATGGAGTACGGAAG+AGG | 0.523221 | 4.4:+11930132 | MS.gene27967:CDS |
| TGTAAACTGAGAATAGTTCT+CGG | 0.523419 | 4.4:-11931075 | None:intergenic |
| GCATACTTAAAAGTTGAGCT+AGG | 0.528109 | 4.4:+11930738 | MS.gene27967:CDS |
| GCAGAGGGTAGCAAAATAAG+AGG | 0.528621 | 4.4:-11930841 | None:intergenic |
| GGGCTAACTGTGAGCATGGA+TGG | 0.531584 | 4.4:+11931744 | MS.gene27967:CDS |
| GTAAACTGAGAATAGTTCTC+GGG | 0.533324 | 4.4:-11931074 | None:intergenic |
| TAAGGTTTGCGGTTTGGACA+GGG | 0.541476 | 4.4:+11931942 | MS.gene27967:CDS |
| TTTGTGGCCTTTATAGCGGC+CGG | 0.542920 | 4.4:+11930765 | MS.gene27967:CDS |
| CTAATAGCACATAGTATACA+AGG | 0.543713 | 4.4:-11931970 | None:intergenic |
| GTGAGGCGTTACTATTCAAG+TGG | 0.544235 | 4.4:+11931638 | MS.gene27967:CDS |
| TTAATAACAATGGATAAAGA+AGG | 0.544252 | 4.4:-11931881 | None:intergenic |
| CAACAGCAACAAGGTCAAGA+TGG | 0.545076 | 4.4:-11930920 | None:intergenic |
| CTTTAGTGCTGTAAATGGCA+AGG | 0.545192 | 4.4:-11930965 | None:intergenic |
| ACAAAGGACAACACAACTGC+CGG | 0.545347 | 4.4:-11930431 | None:intergenic |
| TGGCAACAGTTGATGGAGTA+CGG | 0.547405 | 4.4:+11930126 | MS.gene27967:CDS |
| TGAAGAAGACGCTGAATTGG+TGG | 0.547778 | 4.4:+11930324 | MS.gene27967:CDS |
| TGCAGTTTCAACAATGGCTG+AGG | 0.548532 | 4.4:+11931163 | MS.gene27967:CDS |
| AGTTGATGGAGTACGGAAGA+GGG | 0.549210 | 4.4:+11930133 | MS.gene27967:CDS |
| CACCAGCTCCGCATGATCAG+TGG | 0.550498 | 4.4:-11930273 | None:intergenic |
| ACCATACCATGAAACCCAAA+AGG | 0.551925 | 4.4:-11931098 | None:intergenic |
| GCTTACCGGACTTGAGGCTA+GGG | 0.557372 | 4.4:+11930397 | MS.gene27967:CDS |
| ATCCGGAGGTTGAGAAGCAA+TGG | 0.560522 | 4.4:+11932056 | MS.gene27967:CDS |
| GGAGATACCGGAGACGACAA+AGG | 0.565622 | 4.4:-11930447 | None:intergenic |
| AAGGAATAAGTTAATAACAA+TGG | 0.569334 | 4.4:-11931891 | None:intergenic |
| CAAGTGGGGTAACTACAAAA+GGG | 0.569446 | 4.4:+11931654 | MS.gene27967:CDS |
| TTGTGGCCTTTATAGCGGCC+GGG | 0.569869 | 4.4:+11930766 | MS.gene27967:CDS |
| CTTTGATGCAGTTTCAACAA+TGG | 0.570876 | 4.4:+11931157 | MS.gene27967:CDS |
| TTTAAGAGTTGGGAAAACTA+CGG | 0.577286 | 4.4:+11930197 | MS.gene27967:CDS |
| AAACTACGGAAAATCTGTCA+TGG | 0.579172 | 4.4:+11930211 | MS.gene27967:CDS |
| TTTAGTGCTGTAAATGGCAA+GGG | 0.579804 | 4.4:-11930964 | None:intergenic |
| ATTTCATTAGGTGCTTTGAA+AGG | 0.582581 | 4.4:+11931368 | MS.gene27967:CDS |
| TGAATTGGTGGGACTTGATG+TGG | 0.584039 | 4.4:+11930336 | MS.gene27967:CDS |
| GTAAATGGCAAGGGTTGTGA+TGG | 0.589331 | 4.4:-11930955 | None:intergenic |
| CGAGGCGATGTAGTTGAAGA+CGG | 0.594430 | 4.4:-11930994 | None:intergenic |
| TATTGGGCTAACTGTGAGCA+TGG | 0.600598 | 4.4:+11931740 | MS.gene27967:CDS |
| CTTGAGGCTAGGGAGCAAGC+AGG | 0.600694 | 4.4:+11930407 | MS.gene27967:CDS |
| TGAGGCGTTACTATTCAAGT+GGG | 0.601081 | 4.4:+11931639 | MS.gene27967:CDS |
| TGAGAAGCAATGGAACAAGA+TGG | 0.601081 | 4.4:+11932066 | MS.gene27967:CDS |
| GTACTCACATGATGCCACCT+TGG | 0.601374 | 4.4:+11931453 | MS.gene27967:CDS |
| TTGCTCCCTAGCCTCAAGTC+CGG | 0.601610 | 4.4:-11930402 | None:intergenic |
| GGTCAAGATGGCCATAATCA+GGG | 0.602250 | 4.4:-11930908 | None:intergenic |
| ACGCCTCACCAAAAGTGCTA+AGG | 0.603382 | 4.4:-11931624 | None:intergenic |
| ATGGATAAAGAAGGTAGCCA+AGG | 0.604594 | 4.4:-11931872 | None:intergenic |
| AGACTTTGTGGCCTTTATAG+CGG | 0.604630 | 4.4:+11930761 | MS.gene27967:CDS |
| GAAGGTAGCCAAGGAACCAA+AGG | 0.606519 | 4.4:-11931863 | None:intergenic |
| CTGTTACACAGAGTTTGCTG+TGG | 0.607651 | 4.4:+11930487 | MS.gene27967:CDS |
| GAAGAAGACGCTGAATTGGT+GGG | 0.611576 | 4.4:+11930325 | MS.gene27967:CDS |
| AACAAGCACGTGGAAGAGCG+AGG | 0.615919 | 4.4:-11931012 | None:intergenic |
| GATAAGAGTAAACATAGCAG+TGG | 0.622480 | 4.4:+11932028 | MS.gene27967:CDS |
| GTGGAGATTAAGGCTCGTAG+TGG | 0.627815 | 4.4:+11930293 | MS.gene27967:CDS |
| AGAGGTCCATGATCGTGCTA+CGG | 0.630001 | 4.4:-11930823 | None:intergenic |
| CAATGGAACAAGATGGAGCA+AGG | 0.635963 | 4.4:+11932073 | MS.gene27967:CDS |
| TGCTTTGAAAGGAATGACAA+CGG | 0.638848 | 4.4:+11931379 | MS.gene27967:CDS |
| GAAACGATCCACTGATCATG+CGG | 0.640662 | 4.4:+11930265 | MS.gene27967:CDS |
| CGTTGCTTATAATATACTCA+AGG | 0.641365 | 4.4:-11930797 | None:intergenic |
| TGGAGATTAAGGCTCGTAGT+GGG | 0.642539 | 4.4:+11930294 | MS.gene27967:CDS |
| GCAAAGAAGCCTAAATTATG+GGG | 0.643860 | 4.4:+11931836 | MS.gene27967:CDS |
| GGTCCATGATCGTGCTACGG+CGG | 0.644699 | 4.4:-11930820 | None:intergenic |
| TAGCAGTGGTTCTGATCCGG+AGG | 0.648811 | 4.4:+11932042 | MS.gene27967:CDS |
| GTTGATGGAGTACGGAAGAG+GGG | 0.650485 | 4.4:+11930134 | MS.gene27967:CDS |
| GCTGAGGAAACTAAGAACCC+TGG | 0.654351 | 4.4:+11931179 | MS.gene27967:CDS |
| TGCTTATAATATACTCAAGG+AGG | 0.670617 | 4.4:-11930794 | None:intergenic |
| TGAGGACCACAACAGCAACA+AGG | 0.684477 | 4.4:-11930929 | None:intergenic |
| CAATAGGAATGTCTCTACCA+GGG | 0.688021 | 4.4:-11931196 | None:intergenic |
| ACAAAGTAGAAATCGACATG+AGG | 0.689359 | 4.4:-11931583 | None:intergenic |
| CAAGGGTTGTGATGGCTGTG+AGG | 0.703368 | 4.4:-11930947 | None:intergenic |
| TCAACAAGAGCAAACCAAGG+TGG | 0.728106 | 4.4:-11931467 | None:intergenic |
| ACAGAAGACAGATAACAAAG+CGG | 0.729498 | 4.4:-11930468 | None:intergenic |
| TCATCAACAAGAGCAAACCA+AGG | 0.735762 | 4.4:-11931470 | None:intergenic |
| TGAAGAGAAGAACAAGCACG+TGG | 0.736575 | 4.4:-11931022 | None:intergenic |
| TAGTAAGCAATATATTACGG+TGG | 0.742444 | 4.4:-11931243 | None:intergenic |
| GAGGCGTTACTATTCAAGTG+GGG | 0.751832 | 4.4:+11931640 | MS.gene27967:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGGAATAAGTTAATAACAA+TGG | - | chr4.4:11931894-11931913 | None:intergenic | 20.0% |
| !! | AATGCTTTGATAAGATAAAA+AGG | + | chr4.4:11930595-11930614 | MS.gene27967:intron | 20.0% |
| !! | TCATGTTATGAACTATTATA+CGG | - | chr4.4:11930887-11930906 | None:intergenic | 20.0% |
| !! | TTAATAACAATGGATAAAGA+AGG | - | chr4.4:11931884-11931903 | None:intergenic | 20.0% |
| !! | TTGATAGAAAATCGTATATA+AGG | + | chr4.4:11931924-11931943 | MS.gene27967:CDS | 20.0% |
| !!! | ACTATTTTTGTAATAGTACA+CGG | - | chr4.4:11930657-11930676 | None:intergenic | 20.0% |
| !!! | TTTTTATCTTATCAAAGCAT+TGG | - | chr4.4:11930596-11930615 | None:intergenic | 20.0% |
| ! | AAAATCGTATATAAGGTTTG+CGG | + | chr4.4:11931931-11931950 | MS.gene27967:CDS | 25.0% |
| ! | AATTGGAATTTCAGCTTATT+GGG | + | chr4.4:11931724-11931743 | MS.gene27967:CDS | 25.0% |
| ! | ACCTAATGAAATAATGTACT+TGG | - | chr4.4:11931360-11931379 | None:intergenic | 25.0% |
| ! | ACTATTATACGGAAATAGTT+AGG | - | chr4.4:11930876-11930895 | None:intergenic | 25.0% |
| ! | CTATTATACGGAAATAGTTA+GGG | - | chr4.4:11930875-11930894 | None:intergenic | 25.0% |
| ! | GTTATTAACTTATTCCTTCT+TGG | + | chr4.4:11931896-11931915 | MS.gene27967:CDS | 25.0% |
| ! | TAATTATAATTACCTGCAAC+AGG | - | chr4.4:11930518-11930537 | None:intergenic | 25.0% |
| ! | TGCTAGTAAGCAATATATTA+CGG | - | chr4.4:11931249-11931268 | None:intergenic | 25.0% |
| ! | TTGATTATTGGATCTTCAAT+TGG | + | chr4.4:11931707-11931726 | MS.gene27967:CDS | 25.0% |
| ! | TTTGTTTATCTTTATGCTTG+TGG | + | chr4.4:11931601-11931620 | MS.gene27967:CDS | 25.0% |
| !! | TTGTATACTATGTGCTATTA+GGG | + | chr4.4:11931972-11931991 | MS.gene27967:CDS | 25.0% |
| !! | TTGTTCCATTATGGTTTTTA+GGG | + | chr4.4:11931783-11931802 | MS.gene27967:CDS | 25.0% |
| !! | TTTGTTCCATTATGGTTTTT+AGG | + | chr4.4:11931782-11931801 | MS.gene27967:CDS | 25.0% |
| ATTGAGATTGTAGCATTCAT+AGG | - | chr4.4:11931509-11931528 | None:intergenic | 30.0% | |
| CAATTGGAATTTCAGCTTAT+TGG | + | chr4.4:11931723-11931742 | MS.gene27967:CDS | 30.0% | |
| CGTTGCTTATAATATACTCA+AGG | - | chr4.4:11930800-11930819 | None:intergenic | 30.0% | |
| CTAATAGCACATAGTATACA+AGG | - | chr4.4:11931973-11931992 | None:intergenic | 30.0% | |
| GCCAAGTACATTATTTCATT+AGG | + | chr4.4:11931356-11931375 | MS.gene27967:CDS | 30.0% | |
| TAGTAAGCAATATATTACGG+TGG | - | chr4.4:11931246-11931265 | None:intergenic | 30.0% | |
| TGCTTATAATATACTCAAGG+AGG | - | chr4.4:11930797-11930816 | None:intergenic | 30.0% | |
| TGTAAACTGAGAATAGTTCT+CGG | - | chr4.4:11931078-11931097 | None:intergenic | 30.0% | |
| TTCTATCAATAGATCCAAGA+AGG | - | chr4.4:11931913-11931932 | None:intergenic | 30.0% | |
| TTTAAGAGTTGGGAAAACTA+CGG | + | chr4.4:11930197-11930216 | MS.gene27967:CDS | 30.0% | |
| ! | ACGCAATTTTTGTTCCATTA+TGG | + | chr4.4:11931774-11931793 | MS.gene27967:CDS | 30.0% |
| ! | ATTCTCAGTTTACACCTTTT+GGG | + | chr4.4:11931084-11931103 | MS.gene27967:CDS | 30.0% |
| ! | ATTTCATTAGGTGCTTTGAA+AGG | + | chr4.4:11931368-11931387 | MS.gene27967:CDS | 30.0% |
| ! | CTTGTATACTATGTGCTATT+AGG | + | chr4.4:11931971-11931990 | MS.gene27967:CDS | 30.0% |
| ! | GTTCTTTTCTTTGCTTATGT+TGG | + | chr4.4:11931134-11931153 | MS.gene27967:CDS | 30.0% |
| ! | TATTCTCAGTTTACACCTTT+TGG | + | chr4.4:11931083-11931102 | MS.gene27967:CDS | 30.0% |
| !! | CAATGCTTTTTGTGTATGAT+TGG | + | chr4.4:11930559-11930578 | MS.gene27967:intron | 30.0% |
| AAACTACGGAAAATCTGTCA+TGG | + | chr4.4:11930211-11930230 | MS.gene27967:CDS | 35.0% | |
| AAAGGAACTCCCCATAATTT+AGG | - | chr4.4:11931848-11931867 | None:intergenic | 35.0% | |
| AATTTAGGCTTCTTTGCCAT+TGG | - | chr4.4:11931833-11931852 | None:intergenic | 35.0% | |
| ACAAAGTAGAAATCGACATG+AGG | - | chr4.4:11931586-11931605 | None:intergenic | 35.0% | |
| ACAGAAGACAGATAACAAAG+CGG | - | chr4.4:11930471-11930490 | None:intergenic | 35.0% | |
| ATTGAGCCAATAAGACCAAT+AGG | - | chr4.4:11931215-11931234 | None:intergenic | 35.0% | |
| CATAACATGAACCCTGATTA+TGG | + | chr4.4:11930897-11930916 | MS.gene27967:CDS | 35.0% | |
| CATGTCCCTAAAAACCATAA+TGG | - | chr4.4:11931791-11931810 | None:intergenic | 35.0% | |
| CTTCTCTTCATAGTAATTGC+TGG | + | chr4.4:11931035-11931054 | MS.gene27967:CDS | 35.0% | |
| CTTTGATGCAGTTTCAACAA+TGG | + | chr4.4:11931157-11931176 | MS.gene27967:CDS | 35.0% | |
| GATAAGAGTAAACATAGCAG+TGG | + | chr4.4:11932028-11932047 | MS.gene27967:CDS | 35.0% | |
| GCAAAGAAGCCTAAATTATG+GGG | + | chr4.4:11931836-11931855 | MS.gene27967:CDS | 35.0% | |
| GCATACTTAAAAGTTGAGCT+AGG | + | chr4.4:11930738-11930757 | MS.gene27967:CDS | 35.0% | |
| GGCAAAGAAGCCTAAATTAT+GGG | + | chr4.4:11931835-11931854 | MS.gene27967:CDS | 35.0% | |
| GTAAACTGAGAATAGTTCTC+GGG | - | chr4.4:11931077-11931096 | None:intergenic | 35.0% | |
| TAAATTATGGGGAGTTCCTT+TGG | + | chr4.4:11931847-11931866 | MS.gene27967:CDS | 35.0% | |
| TCAAAAAAACGACTTCTTCC+CGG | + | chr4.4:11930166-11930185 | MS.gene27967:CDS | 35.0% | |
| TGGCAAAGAAGCCTAAATTA+TGG | + | chr4.4:11931834-11931853 | MS.gene27967:CDS | 35.0% | |
| TTTAGTGCTGTAAATGGCAA+GGG | - | chr4.4:11930967-11930986 | None:intergenic | 35.0% | |
| !! | GACATTCCTATTGGTCTTAT+TGG | + | chr4.4:11931206-11931225 | MS.gene27967:CDS | 35.0% |
| !! | GTGTGTCTTGTGTTGATTAT+TGG | + | chr4.4:11931695-11931714 | MS.gene27967:CDS | 35.0% |
| !! | TCTGGAATTTTTGTGCTTAC+CGG | + | chr4.4:11930383-11930402 | MS.gene27967:CDS | 35.0% |
| !! | TGCTTTGAAAGGAATGACAA+CGG | + | chr4.4:11931379-11931398 | MS.gene27967:CDS | 35.0% |
| !! | TTGTTGTCACTGTTTTGTTC+AGG | + | chr4.4:11930705-11930724 | MS.gene27967:intron | 35.0% |
| !!! | TCTTTGGCTTTTTGTTCCAA+TGG | + | chr4.4:11931814-11931833 | MS.gene27967:CDS | 35.0% |
| !!! | TTTACACCTTTTGGGTTTCA+TGG | + | chr4.4:11931092-11931111 | MS.gene27967:CDS | 35.0% |
| AAACGATCCTTCAACCGAAA+AGG | - | chr4.4:11930242-11930261 | None:intergenic | 40.0% | |
| ACCATACCATGAAACCCAAA+AGG | - | chr4.4:11931101-11931120 | None:intergenic | 40.0% | |
| AGACTTTGTGGCCTTTATAG+CGG | + | chr4.4:11930761-11930780 | MS.gene27967:CDS | 40.0% | |
| AGAGCCTTTAGTGCTGTAAA+TGG | - | chr4.4:11930973-11930992 | None:intergenic | 40.0% | |
| AGATAACAAAGCGGAGATAC+CGG | - | chr4.4:11930462-11930481 | None:intergenic | 40.0% | |
| AGATGAAGAAGACGCTGAAT+TGG | + | chr4.4:11930321-11930340 | MS.gene27967:CDS | 40.0% | |
| ATGGATAAAGAAGGTAGCCA+AGG | - | chr4.4:11931875-11931894 | None:intergenic | 40.0% | |
| CAAGTGGGGTAACTACAAAA+GGG | + | chr4.4:11931654-11931673 | MS.gene27967:CDS | 40.0% | |
| CAATAGGAATGTCTCTACCA+GGG | - | chr4.4:11931199-11931218 | None:intergenic | 40.0% | |
| CGTATATAAGGTTTGCGGTT+TGG | + | chr4.4:11931936-11931955 | MS.gene27967:CDS | 40.0% | |
| CTTTAGTGCTGTAAATGGCA+AGG | - | chr4.4:11930968-11930987 | None:intergenic | 40.0% | |
| GCACTAAAAGCAACAGAGAA+AGG | - | chr4.4:11931320-11931339 | None:intergenic | 40.0% | |
| TCAAGTGGGGTAACTACAAA+AGG | + | chr4.4:11931653-11931672 | MS.gene27967:CDS | 40.0% | |
| TCATCAACAAGAGCAAACCA+AGG | - | chr4.4:11931473-11931492 | None:intergenic | 40.0% | |
| TGAGAAGCAATGGAACAAGA+TGG | + | chr4.4:11932066-11932085 | MS.gene27967:CDS | 40.0% | |
| ! | CTGTCATGGAAACACCTTTT+CGG | + | chr4.4:11930225-11930244 | MS.gene27967:CDS | 40.0% |
| ! | CTTGCCATTTACAGCACTAA+AGG | + | chr4.4:11930966-11930985 | MS.gene27967:CDS | 40.0% |
| ! | GCTCTTGTTGATGAAAGAAC+AGG | + | chr4.4:11931479-11931498 | MS.gene27967:CDS | 40.0% |
| ! | TAGTGCTGTTGGAATGGATT+GGG | + | chr4.4:11931334-11931353 | MS.gene27967:CDS | 40.0% |
| ! | TGAGGCGTTACTATTCAAGT+GGG | + | chr4.4:11931639-11931658 | MS.gene27967:CDS | 40.0% |
| ! | TTAGTGCTGTTGGAATGGAT+TGG | + | chr4.4:11931333-11931352 | MS.gene27967:CDS | 40.0% |
| !! | AGGAATGACAACGGTTTTGT+TGG | + | chr4.4:11931388-11931407 | MS.gene27967:CDS | 40.0% |
| !! | TGCTTTTAGTGCTGTTGGAA+TGG | + | chr4.4:11931328-11931347 | MS.gene27967:CDS | 40.0% |
| !! | TTGTCACTGTTTTGTTCAGG+TGG | + | chr4.4:11930708-11930727 | MS.gene27967:intron | 40.0% |
| !! | TTTGGCATTGGTTCAGTTGT+CGG | + | chr4.4:11930359-11930378 | MS.gene27967:CDS | 40.0% |
| !! | TTTTAGGGACATGTGCTCTT+TGG | + | chr4.4:11931798-11931817 | MS.gene27967:CDS | 40.0% |
| !!! | ACCTTTTGGGTTTCATGGTA+TGG | + | chr4.4:11931097-11931116 | MS.gene27967:CDS | 40.0% |
| !!! | ATGACAACGGTTTTGTTGGT+TGG | + | chr4.4:11931392-11931411 | MS.gene27967:CDS | 40.0% |
| !!! | GTTTTGTTGGTTGGTTCTGT+GGG | + | chr4.4:11931401-11931420 | MS.gene27967:CDS | 40.0% |
| !!! | TCTGTTGCTTTTAGTGCTGT+TGG | + | chr4.4:11931323-11931342 | MS.gene27967:CDS | 40.0% |
| AAAAAACGACTTCTTCCCGG+AGG | + | chr4.4:11930169-11930188 | MS.gene27967:CDS | 45.0% | |
| AACTCTTAAACGACTCCTCC+GGG | - | chr4.4:11930187-11930206 | None:intergenic | 45.0% | |
| AACTGTGAGCATGGATGGAT+TGG | + | chr4.4:11931749-11931768 | MS.gene27967:CDS | 45.0% | |
| ACAAAGGACAACACAACTGC+CGG | - | chr4.4:11930434-11930453 | None:intergenic | 45.0% | |
| AGGTCAAGATGGCCATAATC+AGG | - | chr4.4:11930912-11930931 | None:intergenic | 45.0% | |
| AGTTGAGCTAGGAGACTTTG+TGG | + | chr4.4:11930749-11930768 | MS.gene27967:CDS | 45.0% | |
| ATACTCAAGGAGGATGTTCC+CGG | - | chr4.4:11930787-11930806 | None:intergenic | 45.0% | |
| CAACAGCAACAAGGTCAAGA+TGG | - | chr4.4:11930923-11930942 | None:intergenic | 45.0% | |
| CAACTCTTAAACGACTCCTC+CGG | - | chr4.4:11930188-11930207 | None:intergenic | 45.0% | |
| CAATGGAACAAGATGGAGCA+AGG | + | chr4.4:11932073-11932092 | MS.gene27967:CDS | 45.0% | |
| CCAATAGGAATGTCTCTACC+AGG | - | chr4.4:11931200-11931219 | None:intergenic | 45.0% | |
| CCTGGTAGAGACATTCCTAT+TGG | + | chr4.4:11931197-11931216 | MS.gene27967:CDS | 45.0% | |
| CTGAGAATAGTTCTCGGGTT+TGG | - | chr4.4:11931072-11931091 | None:intergenic | 45.0% | |
| GAAACGATCCACTGATCATG+CGG | + | chr4.4:11930265-11930284 | MS.gene27967:CDS | 45.0% | |
| GAAGAAGACGCTGAATTGGT+GGG | + | chr4.4:11930325-11930344 | MS.gene27967:CDS | 45.0% | |
| GCAGAGGGTAGCAAAATAAG+AGG | - | chr4.4:11930844-11930863 | None:intergenic | 45.0% | |
| GGAGGAGTCGTTTAAGAGTT+GGG | + | chr4.4:11930187-11930206 | MS.gene27967:CDS | 45.0% | |
| GGTCAAGATGGCCATAATCA+GGG | - | chr4.4:11930911-11930930 | None:intergenic | 45.0% | |
| GTAAATGGCAAGGGTTGTGA+TGG | - | chr4.4:11930958-11930977 | None:intergenic | 45.0% | |
| TATTGGGCTAACTGTGAGCA+TGG | + | chr4.4:11931740-11931759 | MS.gene27967:CDS | 45.0% | |
| TCAACAAGAGCAAACCAAGG+TGG | - | chr4.4:11931470-11931489 | None:intergenic | 45.0% | |
| TGAAGAAGACGCTGAATTGG+TGG | + | chr4.4:11930324-11930343 | MS.gene27967:CDS | 45.0% | |
| TGAAGAGAAGAACAAGCACG+TGG | - | chr4.4:11931025-11931044 | None:intergenic | 45.0% | |
| TGAATTGGTGGGACTTGATG+TGG | + | chr4.4:11930336-11930355 | MS.gene27967:CDS | 45.0% | |
| TGCAGTTTCAACAATGGCTG+AGG | + | chr4.4:11931163-11931182 | MS.gene27967:CDS | 45.0% | |
| TGGAGATTAAGGCTCGTAGT+GGG | + | chr4.4:11930294-11930313 | MS.gene27967:CDS | 45.0% | |
| TTCCATTGCTTCTCAACCTC+CGG | - | chr4.4:11932061-11932080 | None:intergenic | 45.0% | |
| ! | AGTTAGGGTTTTCGTTGCAG+AGG | - | chr4.4:11930860-11930879 | None:intergenic | 45.0% |
| ! | ATAAGGTTTGCGGTTTGGAC+AGG | + | chr4.4:11931941-11931960 | MS.gene27967:CDS | 45.0% |
| ! | GACTTGATGTGGTTTGGCAT+TGG | + | chr4.4:11930347-11930366 | MS.gene27967:CDS | 45.0% |
| ! | GAGGCGTTACTATTCAAGTG+GGG | + | chr4.4:11931640-11931659 | MS.gene27967:CDS | 45.0% |
| ! | GGAAACACCTTTTCGGTTGA+AGG | + | chr4.4:11930232-11930251 | MS.gene27967:CDS | 45.0% |
| ! | GTGAGGCGTTACTATTCAAG+TGG | + | chr4.4:11931638-11931657 | MS.gene27967:CDS | 45.0% |
| ! | GTTAGGGTTTTCGTTGCAGA+GGG | - | chr4.4:11930859-11930878 | None:intergenic | 45.0% |
| ! | TAAGGTTTGCGGTTTGGACA+GGG | + | chr4.4:11931942-11931961 | MS.gene27967:CDS | 45.0% |
| ! | TCTTGACCTTGTTGCTGTTG+TGG | + | chr4.4:11930923-11930942 | MS.gene27967:CDS | 45.0% |
| ! | TTTTGTGCTTACCGGACTTG+AGG | + | chr4.4:11930391-11930410 | MS.gene27967:CDS | 45.0% |
| !! | ACATAGCAGTGGTTCTGATC+CGG | + | chr4.4:11932039-11932058 | MS.gene27967:CDS | 45.0% |
| !! | AGTTGATGGAGTACGGAAGA+GGG | + | chr4.4:11930133-11930152 | MS.gene27967:CDS | 45.0% |
| !! | CTGTTACACAGAGTTTGCTG+TGG | + | chr4.4:11930487-11930506 | MS.gene27967:CDS | 45.0% |
| !! | TGGCAACAGTTGATGGAGTA+CGG | + | chr4.4:11930126-11930145 | MS.gene27967:CDS | 45.0% |
| !! | TTGGCATTGGTTCAGTTGTC+GGG | + | chr4.4:11930360-11930379 | MS.gene27967:CDS | 45.0% |
| !!! | GGTTTTGTTGGTTGGTTCTG+TGG | + | chr4.4:11931400-11931419 | MS.gene27967:CDS | 45.0% |
| AGAGGTCCATGATCGTGCTA+CGG | - | chr4.4:11930826-11930845 | None:intergenic | 50.0% | |
| ATCCGGAGGTTGAGAAGCAA+TGG | + | chr4.4:11932056-11932075 | MS.gene27967:CDS | 50.0% | |
| CGAGGCGATGTAGTTGAAGA+CGG | - | chr4.4:11930997-11931016 | None:intergenic | 50.0% | |
| CGGAGGAGTCGTTTAAGAGT+TGG | + | chr4.4:11930186-11930205 | MS.gene27967:CDS | 50.0% | |
| GAAGGTAGCCAAGGAACCAA+AGG | - | chr4.4:11931866-11931885 | None:intergenic | 50.0% | |
| GCTGAGGAAACTAAGAACCC+TGG | + | chr4.4:11931179-11931198 | MS.gene27967:CDS | 50.0% | |
| GCTGTGGAAATACCTGTTGC+AGG | + | chr4.4:11930503-11930522 | MS.gene27967:CDS | 50.0% | |
| GTACTCACATGATGCCACCT+TGG | + | chr4.4:11931453-11931472 | MS.gene27967:CDS | 50.0% | |
| GTGGAGATTAAGGCTCGTAG+TGG | + | chr4.4:11930293-11930312 | MS.gene27967:CDS | 50.0% | |
| GTGTTGTCCTTTGTCGTCTC+CGG | + | chr4.4:11930440-11930459 | MS.gene27967:CDS | 50.0% | |
| TGAGGACCACAACAGCAACA+AGG | - | chr4.4:11930932-11930951 | None:intergenic | 50.0% | |
| TGGTGGGACTTGATGTGGTT+TGG | + | chr4.4:11930341-11930360 | MS.gene27967:CDS | 50.0% | |
| TTTGTGGCCTTTATAGCGGC+CGG | + | chr4.4:11930765-11930784 | MS.gene27967:CDS | 50.0% | |
| ! | ATTGGTTCAGTTGTCGGGTC+TGG | + | chr4.4:11930365-11930384 | MS.gene27967:CDS | 50.0% |
| ! | GTTGATGGAGTACGGAAGAG+GGG | + | chr4.4:11930134-11930153 | MS.gene27967:CDS | 50.0% |
| !! | ACGCCTCACCAAAAGTGCTA+AGG | - | chr4.4:11931627-11931646 | None:intergenic | 50.0% |
| !! | CAGTTGATGGAGTACGGAAG+AGG | + | chr4.4:11930132-11930151 | MS.gene27967:CDS | 50.0% |
| !! | GCTTGTGGCCTTAGCACTTT+TGG | + | chr4.4:11931616-11931635 | MS.gene27967:CDS | 50.0% |
| !! | TGGCCTTAGCACTTTTGGTG+AGG | + | chr4.4:11931621-11931640 | MS.gene27967:CDS | 50.0% |
| AACAAGCACGTGGAAGAGCG+AGG | - | chr4.4:11931015-11931034 | None:intergenic | 55.0% | |
| ATCCACTGATCATGCGGAGC+TGG | + | chr4.4:11930271-11930290 | MS.gene27967:CDS | 55.0% | |
| CAAGGGTTGTGATGGCTGTG+AGG | - | chr4.4:11930950-11930969 | None:intergenic | 55.0% | |
| GATGTTCCCGGCCGCTATAA+AGG | - | chr4.4:11930775-11930794 | None:intergenic | 55.0% | |
| GCTTACCGGACTTGAGGCTA+GGG | + | chr4.4:11930397-11930416 | MS.gene27967:CDS | 55.0% | |
| GGAGATACCGGAGACGACAA+AGG | - | chr4.4:11930450-11930469 | None:intergenic | 55.0% | |
| GGGCTAACTGTGAGCATGGA+TGG | + | chr4.4:11931744-11931763 | MS.gene27967:CDS | 55.0% | |
| TGCGGAGCTGGTGGAGATTA+AGG | + | chr4.4:11930283-11930302 | MS.gene27967:CDS | 55.0% | |
| TGCTTACCGGACTTGAGGCT+AGG | + | chr4.4:11930396-11930415 | MS.gene27967:CDS | 55.0% | |
| TTGCTCCCTAGCCTCAAGTC+CGG | - | chr4.4:11930405-11930424 | None:intergenic | 55.0% | |
| TTGTGGCCTTTATAGCGGCC+GGG | + | chr4.4:11930766-11930785 | MS.gene27967:CDS | 55.0% | |
| ! | GGGGAGTTCCTTTGGTTCCT+TGG | + | chr4.4:11931855-11931874 | MS.gene27967:CDS | 55.0% |
| !! | TAGCAGTGGTTCTGATCCGG+AGG | + | chr4.4:11932042-11932061 | MS.gene27967:CDS | 55.0% |
| CACCAGCTCCGCATGATCAG+TGG | - | chr4.4:11930276-11930295 | None:intergenic | 60.0% | |
| CACTGATCATGCGGAGCTGG+TGG | + | chr4.4:11930274-11930293 | MS.gene27967:CDS | 60.0% | |
| CTTGAGGCTAGGGAGCAAGC+AGG | + | chr4.4:11930407-11930426 | MS.gene27967:CDS | 60.0% | |
| GGTCCATGATCGTGCTACGG+CGG | - | chr4.4:11930823-11930842 | None:intergenic | 60.0% | |
| ACGCCGCCGTAGCACGATCA+TGG | + | chr4.4:11930817-11930836 | MS.gene27967:CDS | 65.0% | |
| GGCTAGGGAGCAAGCAGGTC+CGG | + | chr4.4:11930412-11930431 | MS.gene27967:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 11930125 | 11932138 | 11930125 | ID=MS.gene27967 |
| chr4.4 | mRNA | 11930125 | 11932138 | 11930125 | ID=MS.gene27967.t1;Parent=MS.gene27967 |
| chr4.4 | exon | 11930125 | 11930524 | 11930125 | ID=MS.gene27967.t1.exon1;Parent=MS.gene27967.t1 |
| chr4.4 | CDS | 11930125 | 11930524 | 11930125 | ID=cds.MS.gene27967.t1;Parent=MS.gene27967.t1 |
| chr4.4 | exon | 11930727 | 11932138 | 11930727 | ID=MS.gene27967.t1.exon2;Parent=MS.gene27967.t1 |
| chr4.4 | CDS | 11930727 | 11932138 | 11930727 | ID=cds.MS.gene27967.t1;Parent=MS.gene27967.t1 |
| Gene Sequence |
| Protein sequence |
