Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38965.t1 | RHN40813.1 | 96.3 | 572 | 19 | 1 | 21 | 592 | 20 | 589 | 2.5e-310 | 1074.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38965.t1 | Q9SHH0 | 71.5 | 565 | 161 | 0 | 22 | 586 | 23 | 587 | 1.3e-233 | 810.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38965.t1 | A0A396GJV2 | 96.3 | 572 | 19 | 1 | 21 | 592 | 20 | 589 | 1.8e-310 | 1074.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene38965 | MS.gene030907 | PPI |
| MS.gene38965 | MS.gene064542 | PPI |
| MS.gene38965 | MS.gene037356 | PPI |
| MS.gene38965 | MS.gene029217 | PPI |
| MS.gene38965 | MS.gene47928 | PPI |
| MS.gene38965 | MS.gene035805 | PPI |
| MS.gene38965 | MS.gene53499 | PPI |
| MS.gene38965 | MS.gene27968 | PPI |
| MS.gene38965 | MS.gene030906 | PPI |
| MS.gene38965 | MS.gene029219 | PPI |
| MS.gene38965 | MS.gene030905 | PPI |
| MS.gene38965 | MS.gene90825 | PPI |
| MS.gene38965 | MS.gene47931 | PPI |
| MS.gene38965 | MS.gene47930 | PPI |
| MS.gene38965 | MS.gene73119 | PPI |
| MS.gene38965 | MS.gene53498 | PPI |
| MS.gene38965 | MS.gene27966 | PPI |
| MS.gene38965 | MS.gene97346 | PPI |
| MS.gene030903 | MS.gene38965 | PPI |
| MS.gene38965 | MS.gene27969 | PPI |
| MS.gene38965 | MS.gene029093 | PPI |
| MS.gene38965 | MS.gene53496 | PPI |
| MS.gene53497 | MS.gene38965 | PPI |
| MS.gene38965 | MS.gene23912 | PPI |
| MS.gene38965 | MS.gene27967 | PPI |
| MS.gene38965 | MS.gene066439 | PPI |
| MS.gene38965 | MS.gene93135 | PPI |
| MS.gene38965 | MS.gene47929 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38965.t1 | MTR_8g461380 | 95.608 | 592 | 23 | 2 | 1 | 592 | 1 | 589 | 0.0 | 1144 |
| MS.gene38965.t1 | MTR_2g035430 | 60.575 | 591 | 222 | 4 | 10 | 591 | 2 | 590 | 0.0 | 723 |
| MS.gene38965.t1 | MTR_8g089320 | 49.825 | 572 | 279 | 2 | 27 | 590 | 19 | 590 | 0.0 | 585 |
| MS.gene38965.t1 | MTR_8g089360 | 49.823 | 566 | 276 | 3 | 28 | 586 | 25 | 589 | 0.0 | 565 |
| MS.gene38965.t1 | MTR_8g089360 | 49.823 | 566 | 276 | 3 | 28 | 586 | 8 | 572 | 0.0 | 565 |
| MS.gene38965.t1 | MTR_1g030660 | 48.479 | 559 | 283 | 3 | 37 | 594 | 24 | 578 | 0.0 | 554 |
| MS.gene38965.t1 | MTR_6g034535 | 85.830 | 247 | 31 | 1 | 352 | 594 | 68 | 314 | 2.08e-149 | 433 |
| MS.gene38965.t1 | MTR_6g034535 | 67.708 | 96 | 6 | 1 | 106 | 201 | 19 | 89 | 1.01e-28 | 117 |
| MS.gene38965.t1 | MTR_8g089340 | 47.333 | 450 | 225 | 4 | 157 | 594 | 1 | 450 | 1.97e-135 | 403 |
| MS.gene38965.t1 | MTR_1g111740 | 40.174 | 575 | 313 | 8 | 37 | 590 | 7 | 571 | 3.70e-133 | 401 |
| MS.gene38965.t1 | MTR_4g099270 | 38.314 | 522 | 313 | 5 | 64 | 577 | 6 | 526 | 1.24e-106 | 332 |
| MS.gene38965.t1 | MTR_4g099270 | 41.005 | 378 | 219 | 2 | 40 | 413 | 3 | 380 | 1.25e-88 | 280 |
| MS.gene38965.t1 | MTR_4g099270 | 36.145 | 415 | 256 | 5 | 171 | 577 | 1 | 414 | 1.71e-77 | 253 |
| MS.gene38965.t1 | MTR_4g099270 | 40.132 | 304 | 178 | 2 | 40 | 339 | 3 | 306 | 3.91e-65 | 216 |
| MS.gene38965.t1 | MTR_7g007850 | 31.380 | 529 | 337 | 10 | 76 | 587 | 45 | 564 | 1.82e-64 | 221 |
| MS.gene38965.t1 | MTR_7g007850 | 29.910 | 555 | 341 | 11 | 76 | 587 | 45 | 594 | 5.31e-62 | 216 |
| MS.gene38965.t1 | MTR_6g027680 | 31.450 | 407 | 264 | 3 | 63 | 454 | 21 | 427 | 9.27e-62 | 214 |
| MS.gene38965.t1 | MTR_6g027630 | 31.695 | 407 | 268 | 5 | 58 | 454 | 18 | 424 | 5.88e-61 | 212 |
| MS.gene38965.t1 | MTR_6g027630 | 31.695 | 407 | 268 | 5 | 58 | 454 | 18 | 424 | 2.02e-60 | 212 |
| MS.gene38965.t1 | MTR_6g027660 | 31.034 | 406 | 265 | 3 | 56 | 454 | 28 | 425 | 1.28e-59 | 210 |
| MS.gene38965.t1 | MTR_7g086510 | 31.593 | 383 | 255 | 3 | 79 | 454 | 37 | 419 | 3.42e-59 | 209 |
| MS.gene38965.t1 | MTR_6g027650 | 29.730 | 407 | 270 | 4 | 55 | 454 | 20 | 417 | 1.49e-58 | 207 |
| MS.gene38965.t1 | MTR_7g086610 | 31.510 | 384 | 252 | 4 | 80 | 454 | 32 | 413 | 9.34e-57 | 202 |
| MS.gene38965.t1 | MTR_7g007850 | 31.840 | 424 | 272 | 6 | 76 | 487 | 45 | 463 | 5.64e-56 | 197 |
| MS.gene38965.t1 | MTR_7g007850 | 31.840 | 424 | 272 | 6 | 76 | 487 | 45 | 463 | 5.96e-56 | 198 |
| MS.gene38965.t1 | MTR_6g027630 | 31.454 | 337 | 224 | 3 | 125 | 454 | 3 | 339 | 7.79e-49 | 178 |
| MS.gene38965.t1 | MTR_8g089342 | 56.410 | 117 | 51 | 0 | 30 | 146 | 23 | 139 | 1.03e-38 | 139 |
| MS.gene38965.t1 | MTR_6g027670 | 33.544 | 158 | 105 | 0 | 297 | 454 | 1 | 158 | 2.06e-25 | 107 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38965.t1 | AT1G17120 | 71.278 | 571 | 163 | 1 | 19 | 588 | 20 | 590 | 0.0 | 824 |
| MS.gene38965.t1 | AT2G34960 | 62.321 | 560 | 208 | 3 | 20 | 577 | 4 | 562 | 0.0 | 728 |
| MS.gene38965.t1 | AT4G21120 | 51.418 | 564 | 273 | 1 | 28 | 590 | 18 | 581 | 0.0 | 594 |
| MS.gene38965.t1 | AT4G21120 | 49.884 | 431 | 215 | 1 | 161 | 590 | 1 | 431 | 1.57e-148 | 436 |
| MS.gene38965.t1 | AT5G04770 | 40.253 | 554 | 312 | 5 | 38 | 576 | 15 | 564 | 1.78e-129 | 392 |
| MS.gene38965.t1 | AT3G10600 | 39.373 | 574 | 323 | 8 | 35 | 590 | 11 | 577 | 5.11e-129 | 391 |
| MS.gene38965.t1 | AT5G04770 | 43.490 | 384 | 207 | 2 | 38 | 411 | 15 | 398 | 3.96e-98 | 305 |
| MS.gene38965.t1 | AT3G10600 | 37.900 | 438 | 247 | 8 | 171 | 590 | 1 | 431 | 8.46e-90 | 285 |
| MS.gene38965.t1 | AT5G04770 | 37.358 | 439 | 252 | 6 | 171 | 590 | 1 | 435 | 1.69e-84 | 271 |
| MS.gene38965.t1 | AT1G05940 | 30.784 | 536 | 333 | 9 | 76 | 584 | 44 | 568 | 1.42e-61 | 214 |
| MS.gene38965.t1 | AT5G36940 | 29.730 | 407 | 279 | 3 | 55 | 454 | 4 | 410 | 4.22e-60 | 211 |
| MS.gene38965.t1 | AT1G58030 | 29.897 | 388 | 265 | 3 | 74 | 454 | 34 | 421 | 6.64e-58 | 205 |
| MS.gene38965.t1 | AT1G05940 | 31.084 | 489 | 303 | 8 | 76 | 541 | 44 | 521 | 3.79e-57 | 201 |
| MS.gene38965.t1 | AT1G05940 | 32.048 | 415 | 269 | 4 | 76 | 478 | 44 | 457 | 2.98e-56 | 197 |
| MS.gene38965.t1 | AT3G03720 | 28.784 | 403 | 278 | 5 | 60 | 454 | 4 | 405 | 1.04e-53 | 193 |
| MS.gene38965.t1 | AT1G05940 | 29.481 | 424 | 264 | 7 | 156 | 557 | 9 | 419 | 3.44e-44 | 164 |
Find 128 sgRNAs with CRISPR-Local
Find 170 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATATACCTATTGGTTTAAT+TGG | 0.145764 | 8.4:+49232321 | MS.gene38965:CDS |
| ATTAATAGGTGTTCCAGTTT+TGG | 0.242325 | 8.4:-49232607 | None:intergenic |
| GGCATTGGCACTTGTGAATA+TGG | 0.273952 | 8.4:+49232380 | MS.gene38965:CDS |
| GGGACTGCGCTATGGAATTC+TGG | 0.274074 | 8.4:+49232846 | MS.gene38965:CDS |
| GTTGTTGGTTCTTGTGTTGC+TGG | 0.281893 | 8.4:+49232825 | MS.gene38965:CDS |
| CCAATGATCCCATGAGAAAA+AGG | 0.312755 | 8.4:-49233016 | None:intergenic |
| CACCTTCCATTCTCTCTTCA+CGG | 0.321821 | 8.4:-49233154 | None:intergenic |
| AACAAAACCACAACGGCTAA+TGG | 0.322847 | 8.4:-49232045 | None:intergenic |
| GCACTTATTCATCCCAAAAC+TGG | 0.324146 | 8.4:+49232594 | MS.gene38965:CDS |
| CTGCCGGTCTCGGTCGTTCA+TGG | 0.326662 | 8.4:+49231932 | MS.gene38965:CDS |
| TTGTGTTTGTTTGTTGTTGT+TGG | 0.327089 | 8.4:+49232810 | MS.gene38965:CDS |
| TTGCTTGTGAGGAGATATTA+TGG | 0.327696 | 8.4:+49232747 | MS.gene38965:CDS |
| TTGTTCAAATTGGTATGAAA+TGG | 0.328124 | 8.4:+49232448 | MS.gene38965:CDS |
| CCTGTTTGGAAAGATGGTTC+TGG | 0.328232 | 8.4:-49231502 | None:intergenic |
| AACGGTTATTTATTGTTTGA+TGG | 0.330270 | 8.4:+49232359 | MS.gene38965:CDS |
| TGACAACAAGTTTGCTTGTT+GGG | 0.330599 | 8.4:+49232508 | MS.gene38965:CDS |
| GAAGAGGCAACCGAAGGTTT+GGG | 0.333568 | 8.4:+49232947 | MS.gene38965:CDS |
| TTTAGGTTCTTGATTTGTAC+TGG | 0.342607 | 8.4:+49233053 | MS.gene38965:CDS |
| TCTGGTTTGTTTGGTTGGAT+TGG | 0.343362 | 8.4:+49232864 | MS.gene38965:CDS |
| CTTGTTGGTGCTGCCGGTCT+CGG | 0.343843 | 8.4:+49231922 | MS.gene38965:CDS |
| TGTTCAAATTGGTATGAAAT+GGG | 0.344658 | 8.4:+49232449 | MS.gene38965:CDS |
| TTCGGCGCTGTCGTCGGTTC+CGG | 0.347899 | 8.4:+49231682 | MS.gene38965:CDS |
| AGAAGAGGCAACCGAAGGTT+TGG | 0.353119 | 8.4:+49232946 | MS.gene38965:CDS |
| CATGGGATCATTGGGTTATG+AGG | 0.363980 | 8.4:+49233025 | MS.gene38965:CDS |
| ATTCTCCTTGAAGCTCTTGT+TGG | 0.364163 | 8.4:+49231907 | MS.gene38965:CDS |
| CCAGAACCATCTTTCCAAAC+AGG | 0.369698 | 8.4:+49231502 | MS.gene38965:CDS |
| AGCTTCAAGGAGAATATTCC+CGG | 0.371140 | 8.4:-49231899 | None:intergenic |
| CTATGGAATTCTGGTTTGTT+TGG | 0.375852 | 8.4:+49232855 | MS.gene38965:CDS |
| CTGGTTTGTTTGGTTGGATT+GGG | 0.380047 | 8.4:+49232865 | MS.gene38965:CDS |
| CCTTCAAGAGATATACCTAT+TGG | 0.381314 | 8.4:+49232312 | MS.gene38965:CDS |
| GTCAAAAGTGTAGCATTAAT+AGG | 0.382938 | 8.4:-49232621 | None:intergenic |
| GGAATTCTGGTTTGTTTGGT+TGG | 0.396442 | 8.4:+49232859 | MS.gene38965:CDS |
| GACTTAACCTGGCTCGCTTT+CGG | 0.398071 | 8.4:+49231664 | MS.gene38965:CDS |
| AAGTTTGCTTGTTGGGTCAA+TGG | 0.398278 | 8.4:+49232515 | MS.gene38965:CDS |
| AGCTGCGGCGGTGGTGGTCG+TGG | 0.399597 | 8.4:-49231434 | None:intergenic |
| GCCGTTGAAGTTCCCGTCGC+TGG | 0.406958 | 8.4:+49231820 | MS.gene38965:CDS |
| CTCCATCGCCAGTAGCTTCG+TGG | 0.408798 | 8.4:-49231463 | None:intergenic |
| ATACAGTGGCTGCTTGTGTT+TGG | 0.410110 | 8.4:+49232889 | MS.gene38965:CDS |
| GACAGCGCCGAAAGCGAGCC+AGG | 0.411784 | 8.4:-49231671 | None:intergenic |
| TATTTATTGTTTGATGGCAT+TGG | 0.415152 | 8.4:+49232365 | MS.gene38965:CDS |
| CCATGACTCGTTGCCTCACT+TGG | 0.415187 | 8.4:+49231638 | MS.gene38965:CDS |
| GGTGGTGGTCGTGGAGGAGG+AGG | 0.415763 | 8.4:-49231425 | None:intergenic |
| TTGTTGGTTCTTGTGTTGCT+GGG | 0.417278 | 8.4:+49232826 | MS.gene38965:CDS |
| AGTTTGCTTGTTGGGTCAAT+GGG | 0.420169 | 8.4:+49232516 | MS.gene38965:CDS |
| ATTGAACCAATTAAACCAAT+AGG | 0.426832 | 8.4:-49232327 | None:intergenic |
| CCAATAGGTATATCTCTTGA+AGG | 0.429939 | 8.4:-49232312 | None:intergenic |
| GGTGGTCGTGGAGGAGGAGG+AGG | 0.431865 | 8.4:-49231422 | None:intergenic |
| ACGCTGCAGCTGTTGTGTAT+TGG | 0.433327 | 8.4:+49232238 | MS.gene38965:CDS |
| ACCTTCGGTTGCCTCTTCTT+CGG | 0.433369 | 8.4:-49232942 | None:intergenic |
| CTCGCTTTCGGCGCTGTCGT+CGG | 0.437640 | 8.4:+49231676 | MS.gene38965:CDS |
| CGCTGCATATGAGAGGATAA+TGG | 0.438614 | 8.4:-49231752 | None:intergenic |
| TGGATCAAGCATATTGAAAC+CGG | 0.439781 | 8.4:-49232025 | None:intergenic |
| GGCGGTGGTGGTCGTGGAGG+AGG | 0.442173 | 8.4:-49231428 | None:intergenic |
| ATCCTCTCATATGCAGCGTC+AGG | 0.442530 | 8.4:+49231757 | MS.gene38965:CDS |
| TTTCTTGCTTTCATTGCTGC+CGG | 0.444717 | 8.4:+49231880 | MS.gene38965:CDS |
| AATCACCGAGTTCAATTCTC+AGG | 0.448824 | 8.4:-49231858 | None:intergenic |
| TCACTTGGTGGGACTTAACC+TGG | 0.456437 | 8.4:+49231653 | MS.gene38965:CDS |
| TGCTTGTGAGGAGATATTAT+GGG | 0.457451 | 8.4:+49232748 | MS.gene38965:CDS |
| ATCGGTTTCATTATTGTGAT+CGG | 0.459094 | 8.4:+49232150 | MS.gene38965:CDS |
| GAAGCTCTTGTTGGTGCTGC+CGG | 0.460471 | 8.4:+49231916 | MS.gene38965:CDS |
| AGCTTGTTATGGCTAAACTA+TGG | 0.464246 | 8.4:-49233177 | None:intergenic |
| CACAATGATAAAGAACGATT+CGG | 0.464761 | 8.4:+49231969 | MS.gene38965:CDS |
| TGGTTCAATGTCTATGATAA+CGG | 0.465812 | 8.4:+49232341 | MS.gene38965:CDS |
| ATCAAACCGTGAAGAGAGAA+TGG | 0.470500 | 8.4:+49233148 | MS.gene38965:CDS |
| GAGAGTCTGTTGATCGGTTG+AGG | 0.481012 | 8.4:-49231579 | None:intergenic |
| TCCGGTATCTTCGTCGTCAC+CGG | 0.482639 | 8.4:+49231700 | MS.gene38965:CDS |
| ACCGGTGACGACGAAGATAC+CGG | 0.483231 | 8.4:-49231701 | None:intergenic |
| CTTCAAAACCACGAAGCTAC+TGG | 0.483779 | 8.4:+49231455 | MS.gene38965:CDS |
| GACTCGTTGCCTCACTTGGT+GGG | 0.485706 | 8.4:+49231642 | MS.gene38965:CDS |
| ATGACAACAAGTTTGCTTGT+TGG | 0.486739 | 8.4:+49232507 | MS.gene38965:CDS |
| TGACTCGTTGCCTCACTTGG+TGG | 0.488994 | 8.4:+49231641 | MS.gene38965:CDS |
| CCAAGTGAGGCAACGAGTCA+TGG | 0.489696 | 8.4:-49231638 | None:intergenic |
| GCAACTTATGATGTGGATCA+TGG | 0.490232 | 8.4:+49233113 | MS.gene38965:CDS |
| TATGATGTGGATCATGGAAT+TGG | 0.490780 | 8.4:+49233119 | MS.gene38965:CDS |
| GTTGTGTATTGGTCTTATAC+CGG | 0.490812 | 8.4:+49232249 | MS.gene38965:CDS |
| GAAAACGAGCCACCAGCGAC+GGG | 0.494426 | 8.4:-49231832 | None:intergenic |
| AGTTGCAACCATATCAAAAC+CGG | 0.498318 | 8.4:-49232268 | None:intergenic |
| CGAATCGTTCTTTATCATTG+TGG | 0.500875 | 8.4:-49231968 | None:intergenic |
| CAAGAAGCTCGTTTCAATGC+TGG | 0.502149 | 8.4:+49231724 | MS.gene38965:CDS |
| AGACCATGAACGACCGAGAC+CGG | 0.502471 | 8.4:-49231935 | None:intergenic |
| GTGAGTATTTGTGCTTTGAA+AGG | 0.502564 | 8.4:+49232483 | MS.gene38965:CDS |
| CAGCACCAACAAGAGCTTCA+AGG | 0.507060 | 8.4:-49231912 | None:intergenic |
| TTCTTGCTTTCATTGCTGCC+GGG | 0.511347 | 8.4:+49231881 | MS.gene38965:CDS |
| GTTTGCTAAGGCGGTTCGAT+AGG | 0.515786 | 8.4:-49231530 | None:intergenic |
| TGGGCAGGTGTTTGCTAAGG+CGG | 0.516147 | 8.4:-49231539 | None:intergenic |
| CTGTTGATCGGTTGAGGAGA+CGG | 0.523901 | 8.4:-49231573 | None:intergenic |
| AAAACACCTTTAACACCGTA+AGG | 0.526823 | 8.4:-49232213 | None:intergenic |
| GTTCAAATTGGTATGAAATG+GGG | 0.527507 | 8.4:+49232450 | MS.gene38965:CDS |
| GCGTGGGCAGGTGTTTGCTA+AGG | 0.532196 | 8.4:-49231542 | None:intergenic |
| GCTTGATCCATTAGCCGTTG+TGG | 0.536314 | 8.4:+49232038 | MS.gene38965:CDS |
| TGGCTATTGCATTGCTTGTG+AGG | 0.541304 | 8.4:+49232736 | MS.gene38965:CDS |
| GTGTTGCTGGGACTGCGCTA+TGG | 0.541923 | 8.4:+49232838 | MS.gene38965:CDS |
| TGAAAACGAGCCACCAGCGA+CGG | 0.546421 | 8.4:-49231833 | None:intergenic |
| ATTGAAACGAGCTTCTTGAC+CGG | 0.547155 | 8.4:-49231719 | None:intergenic |
| AAGAGGCAACCGAAGGTTTG+GGG | 0.551045 | 8.4:+49232948 | MS.gene38965:CDS |
| TGAGTTTGCTTCCGAAGAAG+AGG | 0.551130 | 8.4:+49232931 | MS.gene38965:CDS |
| TTGGGTCAATGGGACAAGCT+AGG | 0.554068 | 8.4:+49232526 | MS.gene38965:CDS |
| ACTAACGGAATCGCGGCTAG+TGG | 0.559727 | 8.4:+49232072 | MS.gene38965:CDS |
| GTTGAAGTTCCCGTCGCTGG+TGG | 0.562608 | 8.4:+49231823 | MS.gene38965:CDS |
| TTCGTCGCAATTGACAATGA+TGG | 0.568799 | 8.4:-49232993 | None:intergenic |
| CAACGGATAAGAGTGATTTG+TGG | 0.572032 | 8.4:+49232778 | MS.gene38965:CDS |
| GATGGCACCCACGGAACCAA+CGG | 0.573267 | 8.4:-49232975 | None:intergenic |
| TGCGGCGGTGGTGGTCGTGG+AGG | 0.574346 | 8.4:-49231431 | None:intergenic |
| ATTGACAATGATGGCACCCA+CGG | 0.576091 | 8.4:-49232984 | None:intergenic |
| AGAGGCAACCGAAGGTTTGG+GGG | 0.576184 | 8.4:+49232949 | MS.gene38965:CDS |
| CAATAGGTATATCTCTTGAA+GGG | 0.579389 | 8.4:-49232311 | None:intergenic |
| ACCAGCGACGGGAACTTCAA+CGG | 0.587595 | 8.4:-49231821 | None:intergenic |
| AACCGTGAAGAGAGAATGGA+AGG | 0.591306 | 8.4:+49233152 | MS.gene38965:CDS |
| AAGTATAGTGAGATTGATGC+TGG | 0.595966 | 8.4:+49232405 | MS.gene38965:CDS |
| GAGGAGGAGGAGGATGATGT+CGG | 0.597641 | 8.4:-49231412 | None:intergenic |
| TCCGAAGAAGAGGCAACCGA+AGG | 0.598435 | 8.4:+49232941 | MS.gene38965:CDS |
| AACCACGAAGCTACTGGCGA+TGG | 0.600504 | 8.4:+49231461 | MS.gene38965:CDS |
| GAGGAGGAGGATGATGTCGG+TGG | 0.603081 | 8.4:-49231409 | None:intergenic |
| GGATAAGAGTGATTTGTGGA+AGG | 0.603211 | 8.4:+49232782 | MS.gene38965:CDS |
| ATATTATGGGAGGGAATCAA+CGG | 0.605663 | 8.4:+49232761 | MS.gene38965:CDS |
| GAGGCAACCGAAGGTTTGGG+GGG | 0.616110 | 8.4:+49232950 | MS.gene38965:CDS |
| AGGTTAAGTCCCACCAAGTG+AGG | 0.616937 | 8.4:-49231651 | None:intergenic |
| AACCTGACGCTGCATATGAG+AGG | 0.617228 | 8.4:-49231759 | None:intergenic |
| TGTGAGGAGATATTATGGGA+GGG | 0.620522 | 8.4:+49232752 | MS.gene38965:CDS |
| TTGTGAGGAGATATTATGGG+AGG | 0.634083 | 8.4:+49232751 | MS.gene38965:CDS |
| GTTAATCACTAACGGAATCG+CGG | 0.635124 | 8.4:+49232065 | MS.gene38965:CDS |
| GTTCATGAGAGTCTGTTGAT+CGG | 0.635369 | 8.4:-49231585 | None:intergenic |
| TCATTCCTGAGAATTGAACT+CGG | 0.651300 | 8.4:+49231853 | MS.gene38965:CDS |
| GGTACACTACTCAAATTGCA+AGG | 0.653655 | 8.4:+49232547 | MS.gene38965:CDS |
| GCATATGAGAGGATAATGGA+AGG | 0.658306 | 8.4:-49231748 | None:intergenic |
| TGTTCATGCAACTTATGATG+TGG | 0.672047 | 8.4:+49233106 | MS.gene38965:CDS |
| TGGTTGGATTGGGTATACAG+TGG | 0.673228 | 8.4:+49232875 | MS.gene38965:CDS |
| AGTGATTAACAAAACCACAA+CGG | 0.729960 | 8.4:-49232052 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTGTTACAACTTTTATTAT+CGG | + | chr8.4:49232132-49232151 | MS.gene38965:CDS | 15.0% |
| !!! | CTTTTGTATTATTTATTTGT+GGG | + | chr8.4:49233083-49233102 | MS.gene38965:CDS | 15.0% |
| !!! | AGAATTGATTCTTTTAAAAC+CGG | + | chr8.4:49232006-49232025 | MS.gene38965:CDS | 20.0% |
| !!! | GCTTTTGTATTATTTATTTG+TGG | + | chr8.4:49233082-49233101 | MS.gene38965:CDS | 20.0% |
| !!! | TCTTTTCATTTTTATGCTTA+TGG | + | chr8.4:49232716-49232735 | MS.gene38965:CDS | 20.0% |
| ! | AACGGTTATTTATTGTTTGA+TGG | + | chr8.4:49232359-49232378 | MS.gene38965:CDS | 25.0% |
| ! | ATTGAACCAATTAAACCAAT+AGG | - | chr8.4:49232330-49232349 | None:intergenic | 25.0% |
| ! | GAAAAACATCTATCTTAACA+TGG | + | chr8.4:49232100-49232119 | MS.gene38965:CDS | 25.0% |
| ! | TGTTCAAATTGGTATGAAAT+GGG | + | chr8.4:49232449-49232468 | MS.gene38965:CDS | 25.0% |
| ! | TTGTTCAAATTGGTATGAAA+TGG | + | chr8.4:49232448-49232467 | MS.gene38965:CDS | 25.0% |
| !! | TATTTATTGTTTGATGGCAT+TGG | + | chr8.4:49232365-49232384 | MS.gene38965:CDS | 25.0% |
| !!! | GATATACCTATTGGTTTAAT+TGG | + | chr8.4:49232321-49232340 | MS.gene38965:CDS | 25.0% |
| AGTGATTAACAAAACCACAA+CGG | - | chr8.4:49232055-49232074 | None:intergenic | 30.0% | |
| CAATAGGTATATCTCTTGAA+GGG | - | chr8.4:49232314-49232333 | None:intergenic | 30.0% | |
| CACAATGATAAAGAACGATT+CGG | + | chr8.4:49231969-49231988 | MS.gene38965:CDS | 30.0% | |
| GGATGAATAAGTGCAAAAAA+GGG | - | chr8.4:49232588-49232607 | None:intergenic | 30.0% | |
| GTTCAAATTGGTATGAAATG+GGG | + | chr8.4:49232450-49232469 | MS.gene38965:CDS | 30.0% | |
| TGGTTCAATGTCTATGATAA+CGG | + | chr8.4:49232341-49232360 | MS.gene38965:CDS | 30.0% | |
| TTAACACCGTAAGGAAAAAA+CGG | - | chr8.4:49232207-49232226 | None:intergenic | 30.0% | |
| ! | ATCGGTTTCATTATTGTGAT+CGG | + | chr8.4:49232150-49232169 | MS.gene38965:CDS | 30.0% |
| ! | ATTAATAGGTGTTCCAGTTT+TGG | - | chr8.4:49232610-49232629 | None:intergenic | 30.0% |
| ! | GTCAAAAGTGTAGCATTAAT+AGG | - | chr8.4:49232624-49232643 | None:intergenic | 30.0% |
| ! | TGTTGCTCTTTTTACTAGTT+TGG | + | chr8.4:49232662-49232681 | MS.gene38965:CDS | 30.0% |
| ! | TTAATAGGTGTTCCAGTTTT+GGG | - | chr8.4:49232609-49232628 | None:intergenic | 30.0% |
| ! | TTTTGATATGGTTGCAACTA+TGG | + | chr8.4:49232272-49232291 | MS.gene38965:CDS | 30.0% |
| !! | AGAACGATTCGGATTATTTT+CGG | + | chr8.4:49231980-49231999 | MS.gene38965:CDS | 30.0% |
| !! | ATTGTGATCGGTTTTATACA+CGG | + | chr8.4:49232162-49232181 | MS.gene38965:CDS | 30.0% |
| !! | TTGTGTTTGTTTGTTGTTGT+TGG | + | chr8.4:49232810-49232829 | MS.gene38965:CDS | 30.0% |
| !! | TTTAGGTTCTTGATTTGTAC+TGG | + | chr8.4:49233053-49233072 | MS.gene38965:CDS | 30.0% |
| !!! | GTGGTTTTGTTAATCACTAA+CGG | + | chr8.4:49232057-49232076 | MS.gene38965:CDS | 30.0% |
| !!! | TCAGTTGCTTTTGTTCAAAT+TGG | + | chr8.4:49232438-49232457 | MS.gene38965:CDS | 30.0% |
| !!! | TTAACACCGTTTTTTCCTTA+CGG | + | chr8.4:49232198-49232217 | MS.gene38965:CDS | 30.0% |
| !!! | TTTTTTCCTTACGGTGTTAA+AGG | + | chr8.4:49232207-49232226 | MS.gene38965:CDS | 30.0% |
| AAAACACCTTTAACACCGTA+AGG | - | chr8.4:49232216-49232235 | None:intergenic | 35.0% | |
| AAGTATAGTGAGATTGATGC+TGG | + | chr8.4:49232405-49232424 | MS.gene38965:CDS | 35.0% | |
| AGTTGCAACCATATCAAAAC+CGG | - | chr8.4:49232271-49232290 | None:intergenic | 35.0% | |
| ATATTATGGGAGGGAATCAA+CGG | + | chr8.4:49232761-49232780 | MS.gene38965:CDS | 35.0% | |
| CCAATAGGTATATCTCTTGA+AGG | - | chr8.4:49232315-49232334 | None:intergenic | 35.0% | |
| CCTTCAAGAGATATACCTAT+TGG | + | chr8.4:49232312-49232331 | MS.gene38965:CDS | 35.0% | |
| CGAATCGTTCTTTATCATTG+TGG | - | chr8.4:49231971-49231990 | None:intergenic | 35.0% | |
| GGGATGAATAAGTGCAAAAA+AGG | - | chr8.4:49232589-49232608 | None:intergenic | 35.0% | |
| TATGATGTGGATCATGGAAT+TGG | + | chr8.4:49233119-49233138 | MS.gene38965:CDS | 35.0% | |
| TCATTCCTGAGAATTGAACT+CGG | + | chr8.4:49231853-49231872 | MS.gene38965:CDS | 35.0% | |
| TGAATAAGTGCAAAAAAGGG+TGG | - | chr8.4:49232585-49232604 | None:intergenic | 35.0% | |
| TGCTTGTGAGGAGATATTAT+GGG | + | chr8.4:49232748-49232767 | MS.gene38965:CDS | 35.0% | |
| TGGATCAAGCATATTGAAAC+CGG | - | chr8.4:49232028-49232047 | None:intergenic | 35.0% | |
| TGTTCATGCAACTTATGATG+TGG | + | chr8.4:49233106-49233125 | MS.gene38965:CDS | 35.0% | |
| TTGCTTGTGAGGAGATATTA+TGG | + | chr8.4:49232747-49232766 | MS.gene38965:CDS | 35.0% | |
| ! | ATGACAACAAGTTTGCTTGT+TGG | + | chr8.4:49232507-49232526 | MS.gene38965:CDS | 35.0% |
| ! | CTTTTTCTCATGGGATCATT+GGG | + | chr8.4:49233017-49233036 | MS.gene38965:CDS | 35.0% |
| ! | GTGAGTATTTGTGCTTTGAA+AGG | + | chr8.4:49232483-49232502 | MS.gene38965:CDS | 35.0% |
| ! | GTTTTTCCTGTTTGGAAAGA+TGG | - | chr8.4:49231511-49231530 | None:intergenic | 35.0% |
| ! | TGACAACAAGTTTGCTTGTT+GGG | + | chr8.4:49232508-49232527 | MS.gene38965:CDS | 35.0% |
| ! | TTCGATAGGTTTTTCCTGTT+TGG | - | chr8.4:49231519-49231538 | None:intergenic | 35.0% |
| !! | CTATGGAATTCTGGTTTGTT+TGG | + | chr8.4:49232855-49232874 | MS.gene38965:CDS | 35.0% |
| !! | GTTGTGTATTGGTCTTATAC+CGG | + | chr8.4:49232249-49232268 | MS.gene38965:CDS | 35.0% |
| !!! | ATGGAATTTTCACTGGCTTT+GGG | - | chr8.4:49231622-49231641 | None:intergenic | 35.0% |
| !!! | GTCTTATACCGGTTTTGATA+TGG | + | chr8.4:49232260-49232279 | MS.gene38965:CDS | 35.0% |
| !!! | TGGGTTATGAGGCTTTTTTT+AGG | + | chr8.4:49233036-49233055 | MS.gene38965:CDS | 35.0% |
| AACAAAACCACAACGGCTAA+TGG | - | chr8.4:49232048-49232067 | None:intergenic | 40.0% | |
| AATCACCGAGTTCAATTCTC+AGG | - | chr8.4:49231861-49231880 | None:intergenic | 40.0% | |
| AGCTTCAAGGAGAATATTCC+CGG | - | chr8.4:49231902-49231921 | None:intergenic | 40.0% | |
| ATCAAACCGTGAAGAGAGAA+TGG | + | chr8.4:49233148-49233167 | MS.gene38965:CDS | 40.0% | |
| ATTCTCCTTGAAGCTCTTGT+TGG | + | chr8.4:49231907-49231926 | MS.gene38965:CDS | 40.0% | |
| ATTGAAACGAGCTTCTTGAC+CGG | - | chr8.4:49231722-49231741 | None:intergenic | 40.0% | |
| CAACGGATAAGAGTGATTTG+TGG | + | chr8.4:49232778-49232797 | MS.gene38965:CDS | 40.0% | |
| CCAATGATCCCATGAGAAAA+AGG | - | chr8.4:49233019-49233038 | None:intergenic | 40.0% | |
| GCAACTTATGATGTGGATCA+TGG | + | chr8.4:49233113-49233132 | MS.gene38965:CDS | 40.0% | |
| GCACTTATTCATCCCAAAAC+TGG | + | chr8.4:49232594-49232613 | MS.gene38965:CDS | 40.0% | |
| GGTACACTACTCAAATTGCA+AGG | + | chr8.4:49232547-49232566 | MS.gene38965:CDS | 40.0% | |
| GTTAATCACTAACGGAATCG+CGG | + | chr8.4:49232065-49232084 | MS.gene38965:CDS | 40.0% | |
| GTTCATGAGAGTCTGTTGAT+CGG | - | chr8.4:49231588-49231607 | None:intergenic | 40.0% | |
| TGTGAGGAGATATTATGGGA+GGG | + | chr8.4:49232752-49232771 | MS.gene38965:CDS | 40.0% | |
| TTCGTCGCAATTGACAATGA+TGG | - | chr8.4:49232996-49233015 | None:intergenic | 40.0% | |
| TTGTGAGGAGATATTATGGG+AGG | + | chr8.4:49232751-49232770 | MS.gene38965:CDS | 40.0% | |
| TTTCTTGCTTTCATTGCTGC+CGG | + | chr8.4:49231880-49231899 | MS.gene38965:CDS | 40.0% | |
| ! | AAGTTTGCTTGTTGGGTCAA+TGG | + | chr8.4:49232515-49232534 | MS.gene38965:CDS | 40.0% |
| ! | ACGAGTCATGGAATTTTCAC+TGG | - | chr8.4:49231629-49231648 | None:intergenic | 40.0% |
| ! | AGTTTGCTTGTTGGGTCAAT+GGG | + | chr8.4:49232516-49232535 | MS.gene38965:CDS | 40.0% |
| ! | CCTTTTTCTCATGGGATCAT+TGG | + | chr8.4:49233016-49233035 | MS.gene38965:CDS | 40.0% |
| ! | GGATAAGAGTGATTTGTGGA+AGG | + | chr8.4:49232782-49232801 | MS.gene38965:CDS | 40.0% |
| !! | CTGGTTTGTTTGGTTGGATT+GGG | + | chr8.4:49232865-49232884 | MS.gene38965:CDS | 40.0% |
| !! | GCATATGAGAGGATAATGGA+AGG | - | chr8.4:49231751-49231770 | None:intergenic | 40.0% |
| !! | GGAATTCTGGTTTGTTTGGT+TGG | + | chr8.4:49232859-49232878 | MS.gene38965:CDS | 40.0% |
| !! | TCTGGTTTGTTTGGTTGGAT+TGG | + | chr8.4:49232864-49232883 | MS.gene38965:CDS | 40.0% |
| !! | TTGTTGGTTCTTGTGTTGCT+GGG | + | chr8.4:49232826-49232845 | MS.gene38965:CDS | 40.0% |
| !!! | AATTTTCACTGGCTTTGGGA+AGG | - | chr8.4:49231618-49231637 | None:intergenic | 40.0% |
| !!! | CATGGAATTTTCACTGGCTT+TGG | - | chr8.4:49231623-49231642 | None:intergenic | 40.0% |
| AACCGTGAAGAGAGAATGGA+AGG | + | chr8.4:49233152-49233171 | MS.gene38965:CDS | 45.0% | |
| ATACAGTGGCTGCTTGTGTT+TGG | + | chr8.4:49232889-49232908 | MS.gene38965:CDS | 45.0% | |
| ATTGACAATGATGGCACCCA+CGG | - | chr8.4:49232987-49233006 | None:intergenic | 45.0% | |
| CAAGAAGCTCGTTTCAATGC+TGG | + | chr8.4:49231724-49231743 | MS.gene38965:CDS | 45.0% | |
| CACCTTCCATTCTCTCTTCA+CGG | - | chr8.4:49233157-49233176 | None:intergenic | 45.0% | |
| CATGGGATCATTGGGTTATG+AGG | + | chr8.4:49233025-49233044 | MS.gene38965:CDS | 45.0% | |
| CCAGAACCATCTTTCCAAAC+AGG | + | chr8.4:49231502-49231521 | MS.gene38965:CDS | 45.0% | |
| CCTGTTTGGAAAGATGGTTC+TGG | - | chr8.4:49231505-49231524 | None:intergenic | 45.0% | |
| CGCTGCATATGAGAGGATAA+TGG | - | chr8.4:49231755-49231774 | None:intergenic | 45.0% | |
| CTTCAAAACCACGAAGCTAC+TGG | + | chr8.4:49231455-49231474 | MS.gene38965:CDS | 45.0% | |
| TGGCTATTGCATTGCTTGTG+AGG | + | chr8.4:49232736-49232755 | MS.gene38965:CDS | 45.0% | |
| TTCTTGCTTTCATTGCTGCC+GGG | + | chr8.4:49231881-49231900 | MS.gene38965:CDS | 45.0% | |
| ! | GCGACGAACCTTTTTCTCAT+GGG | + | chr8.4:49233008-49233027 | MS.gene38965:CDS | 45.0% |
| ! | TGAGTTTGCTTCCGAAGAAG+AGG | + | chr8.4:49232931-49232950 | MS.gene38965:CDS | 45.0% |
| ! | TGCGACGAACCTTTTTCTCA+TGG | + | chr8.4:49233007-49233026 | MS.gene38965:CDS | 45.0% |
| ! | TGGTTGGATTGGGTATACAG+TGG | + | chr8.4:49232875-49232894 | MS.gene38965:CDS | 45.0% |
| !! | GGCATTGGCACTTGTGAATA+TGG | + | chr8.4:49232380-49232399 | MS.gene38965:CDS | 45.0% |
| !! | GTTGTTGGTTCTTGTGTTGC+TGG | + | chr8.4:49232825-49232844 | MS.gene38965:CDS | 45.0% |
| !!! | GGCTGCTTGTGTTTGGTTTT+TGG | + | chr8.4:49232896-49232915 | MS.gene38965:CDS | 45.0% |
| AACCTGACGCTGCATATGAG+AGG | - | chr8.4:49231762-49231781 | None:intergenic | 50.0% | |
| AAGAGGCAACCGAAGGTTTG+GGG | + | chr8.4:49232948-49232967 | MS.gene38965:CDS | 50.0% | |
| ACCTTCGGTTGCCTCTTCTT+CGG | - | chr8.4:49232945-49232964 | None:intergenic | 50.0% | |
| ACGCTGCAGCTGTTGTGTAT+TGG | + | chr8.4:49232238-49232257 | MS.gene38965:CDS | 50.0% | |
| AGAAGAGGCAACCGAAGGTT+TGG | + | chr8.4:49232946-49232965 | MS.gene38965:CDS | 50.0% | |
| AGGTTAAGTCCCACCAAGTG+AGG | - | chr8.4:49231654-49231673 | None:intergenic | 50.0% | |
| ATCCTCTCATATGCAGCGTC+AGG | + | chr8.4:49231757-49231776 | MS.gene38965:CDS | 50.0% | |
| CAGCACCAACAAGAGCTTCA+AGG | - | chr8.4:49231915-49231934 | None:intergenic | 50.0% | |
| CTGTTGATCGGTTGAGGAGA+CGG | - | chr8.4:49231576-49231595 | None:intergenic | 50.0% | |
| GAAGAGGCAACCGAAGGTTT+GGG | + | chr8.4:49232947-49232966 | MS.gene38965:CDS | 50.0% | |
| GAGAGTCTGTTGATCGGTTG+AGG | - | chr8.4:49231582-49231601 | None:intergenic | 50.0% | |
| GCTTGATCCATTAGCCGTTG+TGG | + | chr8.4:49232038-49232057 | MS.gene38965:CDS | 50.0% | |
| TTGGGTCAATGGGACAAGCT+AGG | + | chr8.4:49232526-49232545 | MS.gene38965:CDS | 50.0% | |
| ! | AGGAGACGGTCTTTTAAGCG+TGG | - | chr8.4:49231562-49231581 | None:intergenic | 50.0% |
| ! | GACTTAACCTGGCTCGCTTT+CGG | + | chr8.4:49231664-49231683 | MS.gene38965:CDS | 50.0% |
| ! | GGAGACGGTCTTTTAAGCGT+GGG | - | chr8.4:49231561-49231580 | None:intergenic | 50.0% |
| ! | GTTTGCTAAGGCGGTTCGAT+AGG | - | chr8.4:49231533-49231552 | None:intergenic | 50.0% |
| ! | TCACTTGGTGGGACTTAACC+TGG | + | chr8.4:49231653-49231672 | MS.gene38965:CDS | 50.0% |
| !!! | GCTTCGTGGTTTTGAAGCTG+CGG | - | chr8.4:49231452-49231471 | None:intergenic | 50.0% |
| AACCACGAAGCTACTGGCGA+TGG | + | chr8.4:49231461-49231480 | MS.gene38965:CDS | 55.0% | |
| AACGGAACCCCCCAAACCTT+CGG | - | chr8.4:49232960-49232979 | None:intergenic | 55.0% | |
| ACCAGCGACGGGAACTTCAA+CGG | - | chr8.4:49231824-49231843 | None:intergenic | 55.0% | |
| ACCGGTGACGACGAAGATAC+CGG | - | chr8.4:49231704-49231723 | None:intergenic | 55.0% | |
| ACTAACGGAATCGCGGCTAG+TGG | + | chr8.4:49232072-49232091 | MS.gene38965:CDS | 55.0% | |
| AGACCATGAACGACCGAGAC+CGG | - | chr8.4:49231938-49231957 | None:intergenic | 55.0% | |
| AGAGGCAACCGAAGGTTTGG+GGG | + | chr8.4:49232949-49232968 | MS.gene38965:CDS | 55.0% | |
| CCAAGTGAGGCAACGAGTCA+TGG | - | chr8.4:49231641-49231660 | None:intergenic | 55.0% | |
| CCATGACTCGTTGCCTCACT+TGG | + | chr8.4:49231638-49231657 | MS.gene38965:CDS | 55.0% | |
| GACTCGTTGCCTCACTTGGT+GGG | + | chr8.4:49231642-49231661 | MS.gene38965:CDS | 55.0% | |
| GAGGAGGAGGAGGATGATGT+CGG | - | chr8.4:49231415-49231434 | None:intergenic | 55.0% | |
| GGGACTGCGCTATGGAATTC+TGG | + | chr8.4:49232846-49232865 | MS.gene38965:CDS | 55.0% | |
| TCCGAAGAAGAGGCAACCGA+AGG | + | chr8.4:49232941-49232960 | MS.gene38965:CDS | 55.0% | |
| TCCGGTATCTTCGTCGTCAC+CGG | + | chr8.4:49231700-49231719 | MS.gene38965:CDS | 55.0% | |
| TGAAAACGAGCCACCAGCGA+CGG | - | chr8.4:49231836-49231855 | None:intergenic | 55.0% | |
| TGACTCGTTGCCTCACTTGG+TGG | + | chr8.4:49231641-49231660 | MS.gene38965:CDS | 55.0% | |
| ! | ACGGTCTTTTAAGCGTGGGC+AGG | - | chr8.4:49231557-49231576 | None:intergenic | 55.0% |
| ! | TGGGCAGGTGTTTGCTAAGG+CGG | - | chr8.4:49231542-49231561 | None:intergenic | 55.0% |
| !! | GAAGCTCTTGTTGGTGCTGC+CGG | + | chr8.4:49231916-49231935 | MS.gene38965:CDS | 55.0% |
| !!! | TCGTGGTTTTGAAGCTGCGG+CGG | - | chr8.4:49231449-49231468 | None:intergenic | 55.0% |
| CTCCATCGCCAGTAGCTTCG+TGG | - | chr8.4:49231466-49231485 | None:intergenic | 60.0% | |
| GAAAACGAGCCACCAGCGAC+GGG | - | chr8.4:49231835-49231854 | None:intergenic | 60.0% | |
| GAAGGTTTGGGGGGTTCCGT+TGG | + | chr8.4:49232959-49232978 | MS.gene38965:CDS | 60.0% | |
| GAGGAGGAGGATGATGTCGG+TGG | - | chr8.4:49231412-49231431 | None:intergenic | 60.0% | |
| GAGGCAACCGAAGGTTTGGG+GGG | + | chr8.4:49232950-49232969 | MS.gene38965:CDS | 60.0% | |
| GATGGCACCCACGGAACCAA+CGG | - | chr8.4:49232978-49232997 | None:intergenic | 60.0% | |
| GTTGAAGTTCCCGTCGCTGG+TGG | + | chr8.4:49231823-49231842 | MS.gene38965:CDS | 60.0% | |
| ! | GCGTGGGCAGGTGTTTGCTA+AGG | - | chr8.4:49231545-49231564 | None:intergenic | 60.0% |
| ! | GTGTTGCTGGGACTGCGCTA+TGG | + | chr8.4:49232838-49232857 | MS.gene38965:CDS | 60.0% |
| !! | CTTGTTGGTGCTGCCGGTCT+CGG | + | chr8.4:49231922-49231941 | MS.gene38965:CDS | 60.0% |
| !!! | TGGTTTTGAAGCTGCGGCGG+TGG | - | chr8.4:49231446-49231465 | None:intergenic | 60.0% |
| !!! | TTTTGAAGCTGCGGCGGTGG+TGG | - | chr8.4:49231443-49231462 | None:intergenic | 60.0% |
| CTCGCTTTCGGCGCTGTCGT+CGG | + | chr8.4:49231676-49231695 | MS.gene38965:CDS | 65.0% | |
| CTGCCGGTCTCGGTCGTTCA+TGG | + | chr8.4:49231932-49231951 | MS.gene38965:CDS | 65.0% | |
| GCCGTTGAAGTTCCCGTCGC+TGG | + | chr8.4:49231820-49231839 | MS.gene38965:CDS | 65.0% | |
| !! | GGGGGTTCCGTTGGTTCCGT+GGG | + | chr8.4:49232968-49232987 | MS.gene38965:CDS | 65.0% |
| !! | TTCGGCGCTGTCGTCGGTTC+CGG | + | chr8.4:49231682-49231701 | MS.gene38965:CDS | 65.0% |
| GGTGGTCGTGGAGGAGGAGG+AGG | - | chr8.4:49231425-49231444 | None:intergenic | 70.0% | |
| ! | GACAGCGCCGAAAGCGAGCC+AGG | - | chr8.4:49231674-49231693 | None:intergenic | 70.0% |
| ! | GGTGGTGGTCGTGGAGGAGG+AGG | - | chr8.4:49231428-49231447 | None:intergenic | 70.0% |
| !! | GGGGGGTTCCGTTGGTTCCG+TGG | + | chr8.4:49232967-49232986 | MS.gene38965:CDS | 70.0% |
| ! | AGCTGCGGCGGTGGTGGTCG+TGG | - | chr8.4:49231437-49231456 | None:intergenic | 75.0% |
| ! | GGCGGTGGTGGTCGTGGAGG+AGG | - | chr8.4:49231431-49231450 | None:intergenic | 75.0% |
| ! | TGCGGCGGTGGTGGTCGTGG+AGG | - | chr8.4:49231434-49231453 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 49231403 | 49233187 | 49231403 | ID=MS.gene38965 |
| chr8.4 | mRNA | 49231403 | 49233187 | 49231403 | ID=MS.gene38965.t1;Parent=MS.gene38965 |
| chr8.4 | exon | 49231403 | 49233187 | 49231403 | ID=MS.gene38965.t1.exon1;Parent=MS.gene38965.t1 |
| chr8.4 | CDS | 49231403 | 49233187 | 49231403 | ID=cds.MS.gene38965.t1;Parent=MS.gene38965.t1 |
| Gene Sequence |
| Protein sequence |
