Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007812.t1 | RHN40813.1 | 96 | 572 | 21 | 1 | 21 | 592 | 20 | 589 | 1.2e-309 | 1071.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007812.t1 | Q9SHH0 | 71.2 | 565 | 163 | 0 | 22 | 586 | 23 | 587 | 4.9e-233 | 808.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007812.t1 | A0A396GJV2 | 96.0 | 572 | 21 | 1 | 21 | 592 | 20 | 589 | 8.9e-310 | 1071.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene030906 | MS.gene007812 | PPI |
| MS.gene007812 | MS.gene53498 | PPI |
| MS.gene064542 | MS.gene007812 | PPI |
| MS.gene007812 | MS.gene27968 | PPI |
| MS.gene53496 | MS.gene007812 | PPI |
| MS.gene90825 | MS.gene007812 | PPI |
| MS.gene47928 | MS.gene007812 | PPI |
| MS.gene029217 | MS.gene007812 | PPI |
| MS.gene53499 | MS.gene007812 | PPI |
| MS.gene007812 | MS.gene73119 | PPI |
| MS.gene007812 | MS.gene27966 | PPI |
| MS.gene53497 | MS.gene007812 | PPI |
| MS.gene007812 | MS.gene029093 | PPI |
| MS.gene97346 | MS.gene007812 | PPI |
| MS.gene47930 | MS.gene007812 | PPI |
| MS.gene93135 | MS.gene007812 | PPI |
| MS.gene029219 | MS.gene007812 | PPI |
| MS.gene035805 | MS.gene007812 | PPI |
| MS.gene23912 | MS.gene007812 | PPI |
| MS.gene47931 | MS.gene007812 | PPI |
| MS.gene030905 | MS.gene007812 | PPI |
| MS.gene037356 | MS.gene007812 | PPI |
| MS.gene007812 | MS.gene27967 | PPI |
| MS.gene27969 | MS.gene007812 | PPI |
| MS.gene066439 | MS.gene007812 | PPI |
| MS.gene007812 | MS.gene47929 | PPI |
| MS.gene030907 | MS.gene007812 | PPI |
| MS.gene030903 | MS.gene007812 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007812.t1 | MTR_8g461380 | 95.812 | 573 | 22 | 1 | 20 | 592 | 19 | 589 | 0.0 | 1087 |
| MS.gene007812.t1 | MTR_2g035430 | 61.687 | 569 | 217 | 1 | 10 | 577 | 2 | 570 | 0.0 | 721 |
| MS.gene007812.t1 | MTR_8g089320 | 50.626 | 559 | 275 | 1 | 27 | 584 | 19 | 577 | 0.0 | 584 |
| MS.gene007812.t1 | MTR_8g089360 | 49.823 | 566 | 276 | 3 | 28 | 586 | 25 | 589 | 0.0 | 563 |
| MS.gene007812.t1 | MTR_8g089360 | 49.823 | 566 | 276 | 3 | 28 | 586 | 8 | 572 | 0.0 | 563 |
| MS.gene007812.t1 | MTR_1g030660 | 48.909 | 550 | 279 | 2 | 37 | 585 | 24 | 572 | 0.0 | 553 |
| MS.gene007812.t1 | MTR_6g034535 | 85.425 | 247 | 32 | 1 | 352 | 594 | 68 | 314 | 4.92e-148 | 430 |
| MS.gene007812.t1 | MTR_6g034535 | 66.667 | 96 | 7 | 1 | 106 | 201 | 19 | 89 | 3.54e-28 | 115 |
| MS.gene007812.t1 | MTR_8g089340 | 46.889 | 450 | 226 | 4 | 157 | 593 | 1 | 450 | 1.28e-134 | 401 |
| MS.gene007812.t1 | MTR_1g111740 | 39.791 | 573 | 315 | 7 | 37 | 588 | 7 | 570 | 1.97e-132 | 399 |
| MS.gene007812.t1 | MTR_4g099270 | 38.123 | 522 | 314 | 5 | 64 | 577 | 6 | 526 | 3.32e-106 | 331 |
| MS.gene007812.t1 | MTR_4g099270 | 40.741 | 378 | 220 | 2 | 40 | 413 | 3 | 380 | 4.44e-88 | 279 |
| MS.gene007812.t1 | MTR_4g099270 | 35.904 | 415 | 257 | 5 | 171 | 577 | 1 | 414 | 5.07e-77 | 251 |
| MS.gene007812.t1 | MTR_7g007850 | 31.380 | 529 | 337 | 10 | 76 | 587 | 45 | 564 | 7.98e-65 | 223 |
| MS.gene007812.t1 | MTR_4g099270 | 39.803 | 304 | 179 | 2 | 40 | 339 | 3 | 306 | 1.21e-64 | 214 |
| MS.gene007812.t1 | MTR_7g007850 | 29.730 | 555 | 342 | 10 | 76 | 587 | 45 | 594 | 1.70e-62 | 217 |
| MS.gene007812.t1 | MTR_6g027680 | 31.450 | 407 | 264 | 3 | 63 | 454 | 21 | 427 | 7.47e-62 | 214 |
| MS.gene007812.t1 | MTR_6g027630 | 31.695 | 407 | 268 | 5 | 58 | 454 | 18 | 424 | 6.13e-61 | 212 |
| MS.gene007812.t1 | MTR_6g027630 | 31.695 | 407 | 268 | 5 | 58 | 454 | 18 | 424 | 1.48e-60 | 212 |
| MS.gene007812.t1 | MTR_7g086510 | 31.854 | 383 | 254 | 3 | 79 | 454 | 37 | 419 | 2.73e-60 | 212 |
| MS.gene007812.t1 | MTR_6g027660 | 31.034 | 406 | 265 | 3 | 56 | 454 | 28 | 425 | 3.49e-60 | 211 |
| MS.gene007812.t1 | MTR_6g027650 | 29.730 | 407 | 270 | 4 | 55 | 454 | 20 | 417 | 1.14e-58 | 207 |
| MS.gene007812.t1 | MTR_7g086610 | 31.771 | 384 | 251 | 4 | 80 | 454 | 32 | 413 | 5.99e-57 | 202 |
| MS.gene007812.t1 | MTR_7g007850 | 31.840 | 424 | 272 | 6 | 76 | 487 | 45 | 463 | 1.47e-56 | 198 |
| MS.gene007812.t1 | MTR_7g007850 | 31.840 | 424 | 272 | 6 | 76 | 487 | 45 | 463 | 2.36e-56 | 199 |
| MS.gene007812.t1 | MTR_6g027630 | 31.454 | 337 | 224 | 3 | 125 | 454 | 3 | 339 | 6.51e-49 | 179 |
| MS.gene007812.t1 | MTR_8g089342 | 57.265 | 117 | 50 | 0 | 30 | 146 | 23 | 139 | 2.73e-39 | 141 |
| MS.gene007812.t1 | MTR_6g027670 | 33.544 | 158 | 105 | 0 | 297 | 454 | 1 | 158 | 2.00e-25 | 107 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007812.t1 | AT1G17120 | 70.951 | 568 | 165 | 0 | 19 | 586 | 20 | 587 | 0.0 | 823 |
| MS.gene007812.t1 | AT2G34960 | 62.321 | 560 | 208 | 3 | 20 | 577 | 4 | 562 | 0.0 | 727 |
| MS.gene007812.t1 | AT4G21120 | 51.318 | 569 | 275 | 2 | 28 | 594 | 18 | 586 | 0.0 | 595 |
| MS.gene007812.t1 | AT4G21120 | 49.771 | 436 | 217 | 2 | 161 | 594 | 1 | 436 | 8.84e-149 | 436 |
| MS.gene007812.t1 | AT5G04770 | 39.510 | 572 | 323 | 6 | 38 | 590 | 15 | 582 | 9.04e-130 | 393 |
| MS.gene007812.t1 | AT3G10600 | 40.000 | 560 | 311 | 8 | 35 | 576 | 11 | 563 | 1.47e-128 | 390 |
| MS.gene007812.t1 | AT5G04770 | 43.490 | 384 | 207 | 2 | 38 | 411 | 15 | 398 | 5.52e-98 | 305 |
| MS.gene007812.t1 | AT3G10600 | 37.900 | 438 | 247 | 8 | 171 | 590 | 1 | 431 | 1.31e-89 | 284 |
| MS.gene007812.t1 | AT5G04770 | 37.358 | 439 | 252 | 6 | 171 | 590 | 1 | 435 | 4.98e-85 | 272 |
| MS.gene007812.t1 | AT1G05940 | 30.784 | 536 | 333 | 9 | 76 | 584 | 44 | 568 | 4.80e-62 | 215 |
| MS.gene007812.t1 | AT5G36940 | 29.730 | 407 | 279 | 3 | 55 | 454 | 4 | 410 | 4.22e-60 | 211 |
| MS.gene007812.t1 | AT1G58030 | 29.897 | 388 | 265 | 3 | 74 | 454 | 34 | 421 | 5.82e-58 | 205 |
| MS.gene007812.t1 | AT1G05940 | 31.084 | 489 | 303 | 8 | 76 | 541 | 44 | 521 | 1.64e-57 | 202 |
| MS.gene007812.t1 | AT1G05940 | 32.048 | 415 | 269 | 4 | 76 | 478 | 44 | 457 | 1.10e-56 | 199 |
| MS.gene007812.t1 | AT3G03720 | 29.032 | 403 | 277 | 5 | 60 | 454 | 4 | 405 | 1.01e-54 | 196 |
| MS.gene007812.t1 | AT1G05940 | 29.481 | 424 | 264 | 7 | 156 | 557 | 9 | 419 | 1.09e-44 | 165 |
Find 131 sgRNAs with CRISPR-Local
Find 173 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATATACCTATTGGTTTAAT+TGG | 0.145764 | 8.1:+53822384 | MS.gene007812:CDS |
| CTTTATCATTGTTGCAAAAT+AGG | 0.159095 | 8.1:-53822022 | None:intergenic |
| ATTAATAGGTGTTCCAGTTT+TGG | 0.242325 | 8.1:-53822670 | None:intergenic |
| GGCATTGGCACTTGTGAATA+TGG | 0.273952 | 8.1:+53822443 | MS.gene007812:CDS |
| GGGACTGCGCTATGGAATTC+TGG | 0.274074 | 8.1:+53822909 | MS.gene007812:CDS |
| GTTGTTGGTTCTTGTGTTGC+TGG | 0.281893 | 8.1:+53822888 | MS.gene007812:CDS |
| GCCGTTGAAGTTCCTGTTGC+CGG | 0.312047 | 8.1:+53821883 | MS.gene007812:CDS |
| CCAATGATCCCATGAGAAAA+AGG | 0.312755 | 8.1:-53823079 | None:intergenic |
| CCGGTTTGGAAAGATGGTTC+TGG | 0.322501 | 8.1:-53821565 | None:intergenic |
| AACAAAACCACAACGGCTAA+TGG | 0.322847 | 8.1:-53822108 | None:intergenic |
| GCACTTATTCATCCCAAAAC+TGG | 0.324146 | 8.1:+53822657 | MS.gene007812:CDS |
| TTGTGTTTGTTTGTTGTTGT+TGG | 0.327089 | 8.1:+53822873 | MS.gene007812:CDS |
| TTGCTTGTGAGGAGATATTA+TGG | 0.327696 | 8.1:+53822810 | MS.gene007812:CDS |
| TTGTTCAAATTGGTATGAAA+TGG | 0.328124 | 8.1:+53822511 | MS.gene007812:CDS |
| AACGGTTATTTATTGTTTGA+TGG | 0.330270 | 8.1:+53822422 | MS.gene007812:CDS |
| TGACAACAAGTTTGCTTGTT+GGG | 0.330599 | 8.1:+53822571 | MS.gene007812:CDS |
| GAGAGTCTGTTGATCGGTTT+AGG | 0.331137 | 8.1:-53821642 | None:intergenic |
| GAAGAGGCAACCGAAGGTTT+GGG | 0.333568 | 8.1:+53823010 | MS.gene007812:CDS |
| TTCGGTAGGTTTCTCCGGTT+TGG | 0.334689 | 8.1:-53821579 | None:intergenic |
| CTGCCGGTCTCGGTCGTTCA+TGG | 0.340474 | 8.1:+53821995 | MS.gene007812:CDS |
| TTTAGGTTCTTGATTTGTAC+TGG | 0.342607 | 8.1:+53823116 | MS.gene007812:CDS |
| TCTGGTTTGTTTGGTTGGAT+TGG | 0.343362 | 8.1:+53822927 | MS.gene007812:CDS |
| CTTGTTGGTGCTGCCGGTCT+CGG | 0.343843 | 8.1:+53821985 | MS.gene007812:CDS |
| TGTTCAAATTGGTATGAAAT+GGG | 0.344658 | 8.1:+53822512 | MS.gene007812:CDS |
| TTCGGCGCTGTCGTTGGTTC+CGG | 0.347948 | 8.1:+53821745 | MS.gene007812:CDS |
| AGAAGAGGCAACCGAAGGTT+TGG | 0.353119 | 8.1:+53823009 | MS.gene007812:CDS |
| CATGGGATCATTGGGTTATG+AGG | 0.363980 | 8.1:+53823088 | MS.gene007812:CDS |
| ATTCTCCTTGAAGCTCTTGT+TGG | 0.364163 | 8.1:+53821970 | MS.gene007812:CDS |
| CTATGGAATTCTGGTTTGTT+TGG | 0.375852 | 8.1:+53822918 | MS.gene007812:CDS |
| CACCTTCCATTATCTCTTCA+CGG | 0.376508 | 8.1:-53823217 | None:intergenic |
| ATCAAACCGTGAAGAGATAA+TGG | 0.377043 | 8.1:+53823211 | MS.gene007812:CDS |
| CTCGCTTTCGGCGCTGTCGT+TGG | 0.378647 | 8.1:+53821739 | MS.gene007812:CDS |
| CTGGTTTGTTTGGTTGGATT+GGG | 0.380047 | 8.1:+53822928 | MS.gene007812:CDS |
| CCTTCAAGAGATATACCTAT+TGG | 0.381314 | 8.1:+53822375 | MS.gene007812:CDS |
| GTCAAAAGTGTAGCATTAAT+AGG | 0.382938 | 8.1:-53822684 | None:intergenic |
| GGAATTCTGGTTTGTTTGGT+TGG | 0.396442 | 8.1:+53822922 | MS.gene007812:CDS |
| GACTTAACCTGGCTCGCTTT+CGG | 0.398071 | 8.1:+53821727 | MS.gene007812:CDS |
| GGCGGTTCGGTAGGTTTCTC+CGG | 0.398229 | 8.1:-53821584 | None:intergenic |
| AAGTTTGCTTGTTGGGTCAA+TGG | 0.398278 | 8.1:+53822578 | MS.gene007812:CDS |
| TTTCTTGCTTTCATTGCTGC+TGG | 0.398831 | 8.1:+53821943 | MS.gene007812:CDS |
| AGCTGCGGCGGTGGTGGTCG+TGG | 0.399597 | 8.1:-53821497 | None:intergenic |
| GTTTCTCCGGTTTGGAAAGA+TGG | 0.404436 | 8.1:-53821571 | None:intergenic |
| GAAAACGAGCCACCGGCAAC+AGG | 0.406244 | 8.1:-53821895 | None:intergenic |
| CTCCATCGCCAGTAGCTTCG+TGG | 0.408798 | 8.1:-53821526 | None:intergenic |
| ATACAGTGGCTGCTTGTGTT+TGG | 0.410110 | 8.1:+53822952 | MS.gene007812:CDS |
| GACAGCGCCGAAAGCGAGCC+AGG | 0.411784 | 8.1:-53821734 | None:intergenic |
| AATCACCGAGTTCGATTCTC+AGG | 0.413491 | 8.1:-53821921 | None:intergenic |
| ACGCTGCAGCTGTCGTGTAT+TGG | 0.414985 | 8.1:+53822301 | MS.gene007812:CDS |
| TATTTATTGTTTGATGGCAT+TGG | 0.415152 | 8.1:+53822428 | MS.gene007812:CDS |
| CCATGACTCGTTGCCTCACT+TGG | 0.415187 | 8.1:+53821701 | MS.gene007812:CDS |
| GGTGGTGGTCGTGGAGGAGG+AGG | 0.415763 | 8.1:-53821488 | None:intergenic |
| TTGTTGGTTCTTGTGTTGCT+GGG | 0.417278 | 8.1:+53822889 | MS.gene007812:CDS |
| AGTTTGCTTGTTGGGTCAAT+GGG | 0.420169 | 8.1:+53822579 | MS.gene007812:CDS |
| ATTGAACCAATTAAACCAAT+AGG | 0.426832 | 8.1:-53822390 | None:intergenic |
| CCAATAGGTATATCTCTTGA+AGG | 0.429939 | 8.1:-53822375 | None:intergenic |
| GGTGGTCGTGGAGGAGGAGG+AGG | 0.431865 | 8.1:-53821485 | None:intergenic |
| ACCTTCGGTTGCCTCTTCTT+CGG | 0.433369 | 8.1:-53823005 | None:intergenic |
| CGCTGCATATGAGAGGATAA+TGG | 0.438614 | 8.1:-53821815 | None:intergenic |
| CCAGAACCATCTTTCCAAAC+CGG | 0.442083 | 8.1:+53821565 | MS.gene007812:CDS |
| GGCGGTGGTGGTCGTGGAGG+AGG | 0.442173 | 8.1:-53821491 | None:intergenic |
| ATCCTCTCATATGCAGCGTC+AGG | 0.442530 | 8.1:+53821820 | MS.gene007812:CDS |
| AATTGAACTTAACCATGTTA+AGG | 0.454399 | 8.1:-53822175 | None:intergenic |
| TCACTTGGTGGGACTTAACC+TGG | 0.456437 | 8.1:+53821716 | MS.gene007812:CDS |
| TGCTTGTGAGGAGATATTAT+GGG | 0.457451 | 8.1:+53822811 | MS.gene007812:CDS |
| GAAGCTCTTGTTGGTGCTGC+CGG | 0.460471 | 8.1:+53821979 | MS.gene007812:CDS |
| TGGATCGAGCATATTGAAAC+CGG | 0.463832 | 8.1:-53822088 | None:intergenic |
| TGGTTCAATGTCTATGATAA+CGG | 0.465812 | 8.1:+53822404 | MS.gene007812:CDS |
| GTCGTGTATTGGTCTTATAC+CGG | 0.481654 | 8.1:+53822312 | MS.gene007812:CDS |
| TCCGGTATCTTCGTCGTCAC+CGG | 0.482639 | 8.1:+53821763 | MS.gene007812:CDS |
| ACCGGTGACGACGAAGATAC+CGG | 0.483231 | 8.1:-53821764 | None:intergenic |
| CTTCAAAACCACGAAGCTAC+TGG | 0.483779 | 8.1:+53821518 | MS.gene007812:CDS |
| GACTCGTTGCCTCACTTGGT+GGG | 0.485706 | 8.1:+53821705 | MS.gene007812:CDS |
| ATGACAACAAGTTTGCTTGT+TGG | 0.486739 | 8.1:+53822570 | MS.gene007812:CDS |
| TGACTCGTTGCCTCACTTGG+TGG | 0.488994 | 8.1:+53821704 | MS.gene007812:CDS |
| CCAAGTGAGGCAACGAGTCA+TGG | 0.489696 | 8.1:-53821701 | None:intergenic |
| GCAACTTATGATGTGGATCA+TGG | 0.490232 | 8.1:+53823176 | MS.gene007812:CDS |
| TATGATGTGGATCATGGAAT+TGG | 0.490780 | 8.1:+53823182 | MS.gene007812:CDS |
| AGGTGTTTGCTAAGGCGGTT+CGG | 0.497696 | 8.1:-53821597 | None:intergenic |
| AGTTGCAACCATATCAAAAC+CGG | 0.498318 | 8.1:-53822331 | None:intergenic |
| CAAGAAGCTCGTTTCAATGC+TGG | 0.502149 | 8.1:+53821787 | MS.gene007812:CDS |
| GTGAGTATTTGTGCTTTGAA+AGG | 0.502564 | 8.1:+53822546 | MS.gene007812:CDS |
| CAGCACCAACAAGAGCTTCA+AGG | 0.507060 | 8.1:-53821975 | None:intergenic |
| ATAGTGTTAGGGCTAAACTA+TGG | 0.519584 | 8.1:-53823240 | None:intergenic |
| AAAACACCTTTAACACCGTA+AGG | 0.526823 | 8.1:-53822276 | None:intergenic |
| GTTCAAATTGGTATGAAATG+GGG | 0.527507 | 8.1:+53822513 | MS.gene007812:CDS |
| GTTTGCTAAGGCGGTTCGGT+AGG | 0.533705 | 8.1:-53821593 | None:intergenic |
| GCTCGATCCATTAGCCGTTG+TGG | 0.536314 | 8.1:+53822101 | MS.gene007812:CDS |
| CTGTTGATCGGTTTAGGAGA+CGG | 0.536854 | 8.1:-53821636 | None:intergenic |
| ACGTGGGCAGGTGTTTGCTA+AGG | 0.538243 | 8.1:-53821605 | None:intergenic |
| TGACCATGAACGACCGAGAC+CGG | 0.540172 | 8.1:-53821998 | None:intergenic |
| TGGCTATTGCATTGCTTGTG+AGG | 0.541304 | 8.1:+53822799 | MS.gene007812:CDS |
| GTGTTGCTGGGACTGCGCTA+TGG | 0.541923 | 8.1:+53822901 | MS.gene007812:CDS |
| ATTGAAACGAGCTTCTTGAC+CGG | 0.547155 | 8.1:-53821782 | None:intergenic |
| TGGGCAGGTGTTTGCTAAGG+CGG | 0.548053 | 8.1:-53821602 | None:intergenic |
| AAGAGGCAACCGAAGGTTTG+GGG | 0.551045 | 8.1:+53823011 | MS.gene007812:CDS |
| TGAGTTTGCTTCCGAAGAAG+AGG | 0.551130 | 8.1:+53822994 | MS.gene007812:CDS |
| TTGGGTCAATGGGACAAGCT+AGG | 0.554068 | 8.1:+53822589 | MS.gene007812:CDS |
| ACTAACGGAATCGCGGCTAG+TGG | 0.559727 | 8.1:+53822135 | MS.gene007812:CDS |
| TTCGTCGCAATTGACAATGA+TGG | 0.568799 | 8.1:-53823056 | None:intergenic |
| CAACGGATAAGAGTGATTTG+TGG | 0.572032 | 8.1:+53822841 | MS.gene007812:CDS |
| GATGGCACCCACGGAACCAA+CGG | 0.573267 | 8.1:-53823038 | None:intergenic |
| TGCGGCGGTGGTGGTCGTGG+AGG | 0.574346 | 8.1:-53821494 | None:intergenic |
| ATTGACAATGATGGCACCCA+CGG | 0.576091 | 8.1:-53823047 | None:intergenic |
| AGAGGCAACCGAAGGTTTGG+GGG | 0.576184 | 8.1:+53823012 | MS.gene007812:CDS |
| CAATAGGTATATCTCTTGAA+GGG | 0.579389 | 8.1:-53822374 | None:intergenic |
| CAGGAATGAAAACGAGCCAC+CGG | 0.587952 | 8.1:-53821902 | None:intergenic |
| GTTGAAGTTCCTGTTGCCGG+TGG | 0.592442 | 8.1:+53821886 | MS.gene007812:CDS |
| GTTCATGAGAGTCTGTTGAT+CGG | 0.592871 | 8.1:-53821648 | None:intergenic |
| AAGTATAGTGAGATTGATGC+TGG | 0.595966 | 8.1:+53822468 | MS.gene007812:CDS |
| GAGGAGGAGGAGGATGATGT+CGG | 0.597641 | 8.1:-53821475 | None:intergenic |
| TCCGAAGAAGAGGCAACCGA+AGG | 0.598435 | 8.1:+53823004 | MS.gene007812:CDS |
| AACCACGAAGCTACTGGCGA+TGG | 0.600504 | 8.1:+53821524 | MS.gene007812:CDS |
| GAGGAGGAGGATGATGTCGG+TGG | 0.603081 | 8.1:-53821472 | None:intergenic |
| GGATAAGAGTGATTTGTGGA+AGG | 0.603211 | 8.1:+53822845 | MS.gene007812:CDS |
| ATATTATGGGAGGGAATCAA+CGG | 0.605663 | 8.1:+53822824 | MS.gene007812:CDS |
| AACCGTGAAGAGATAATGGA+AGG | 0.615392 | 8.1:+53823215 | MS.gene007812:CDS |
| GAGGCAACCGAAGGTTTGGG+GGG | 0.616110 | 8.1:+53823013 | MS.gene007812:CDS |
| AGGTTAAGTCCCACCAAGTG+AGG | 0.616937 | 8.1:-53821714 | None:intergenic |
| AACCTGACGCTGCATATGAG+AGG | 0.617228 | 8.1:-53821822 | None:intergenic |
| TGTGAGGAGATATTATGGGA+GGG | 0.620522 | 8.1:+53822815 | MS.gene007812:CDS |
| ACCGGCAACAGGAACTTCAA+CGG | 0.628727 | 8.1:-53821884 | None:intergenic |
| TTGTGAGGAGATATTATGGG+AGG | 0.634083 | 8.1:+53822814 | MS.gene007812:CDS |
| GTTAATCACTAACGGAATCG+CGG | 0.635124 | 8.1:+53822128 | MS.gene007812:CDS |
| TCATTCCTGAGAATCGAACT+CGG | 0.639210 | 8.1:+53821916 | MS.gene007812:CDS |
| GGTACACTACTCAAATTGCA+AGG | 0.653655 | 8.1:+53822610 | MS.gene007812:CDS |
| GCATATGAGAGGATAATGGA+AGG | 0.658306 | 8.1:-53821811 | None:intergenic |
| TGTTCATGCAACTTATGATG+TGG | 0.672047 | 8.1:+53823169 | MS.gene007812:CDS |
| TGGTTGGATTGGGTATACAG+TGG | 0.673228 | 8.1:+53822938 | MS.gene007812:CDS |
| GATGAAAGCGGAAAGAAGAG+CGG | 0.683982 | 8.1:-53821848 | None:intergenic |
| GAATTCAGCGTAGATGAAAG+CGG | 0.686074 | 8.1:-53821860 | None:intergenic |
| AGTGATTAACAAAACCACAA+CGG | 0.729960 | 8.1:-53822115 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTGTTTCAACTTTTATTAT+CGG | + | chr8.1:53822195-53822214 | MS.gene007812:CDS | 15.0% |
| !!! | CTTTTGTATTATTTATTTGT+GGG | + | chr8.1:53823146-53823165 | MS.gene007812:CDS | 15.0% |
| !!! | GCTTTTGTATTATTTATTTG+TGG | + | chr8.1:53823145-53823164 | MS.gene007812:CDS | 20.0% |
| !!! | TCTTTTCATTTTTATGCTTA+TGG | + | chr8.1:53822779-53822798 | MS.gene007812:CDS | 20.0% |
| ! | AACGGTTATTTATTGTTTGA+TGG | + | chr8.1:53822422-53822441 | MS.gene007812:CDS | 25.0% |
| ! | AATTGAACTTAACCATGTTA+AGG | - | chr8.1:53822178-53822197 | None:intergenic | 25.0% |
| ! | ATTGAACCAATTAAACCAAT+AGG | - | chr8.1:53822393-53822412 | None:intergenic | 25.0% |
| ! | CTTTATCATTGTTGCAAAAT+AGG | - | chr8.1:53822025-53822044 | None:intergenic | 25.0% |
| ! | TGTTCAAATTGGTATGAAAT+GGG | + | chr8.1:53822512-53822531 | MS.gene007812:CDS | 25.0% |
| ! | TTGTTCAAATTGGTATGAAA+TGG | + | chr8.1:53822511-53822530 | MS.gene007812:CDS | 25.0% |
| !! | TATTTATTGTTTGATGGCAT+TGG | + | chr8.1:53822428-53822447 | MS.gene007812:CDS | 25.0% |
| !!! | AGAACGATTCTGATTTTTTT+CGG | + | chr8.1:53822043-53822062 | MS.gene007812:CDS | 25.0% |
| !!! | ATCGGTTTTATTATTGTGAT+CGG | + | chr8.1:53822213-53822232 | MS.gene007812:CDS | 25.0% |
| !!! | CGAATTGATTCTTTTAAAAC+CGG | + | chr8.1:53822069-53822088 | MS.gene007812:CDS | 25.0% |
| !!! | CGGTTTTAAAAGAATCAATT+CGG | - | chr8.1:53822071-53822090 | None:intergenic | 25.0% |
| !!! | GATATACCTATTGGTTTAAT+TGG | + | chr8.1:53822384-53822403 | MS.gene007812:CDS | 25.0% |
| AGTGATTAACAAAACCACAA+CGG | - | chr8.1:53822118-53822137 | None:intergenic | 30.0% | |
| CAATAGGTATATCTCTTGAA+GGG | - | chr8.1:53822377-53822396 | None:intergenic | 30.0% | |
| GAAAAACATCTACCTTAACA+TGG | + | chr8.1:53822163-53822182 | MS.gene007812:CDS | 30.0% | |
| GGATGAATAAGTGCAAAAAA+GGG | - | chr8.1:53822651-53822670 | None:intergenic | 30.0% | |
| GTTCAAATTGGTATGAAATG+GGG | + | chr8.1:53822513-53822532 | MS.gene007812:CDS | 30.0% | |
| TGGTTCAATGTCTATGATAA+CGG | + | chr8.1:53822404-53822423 | MS.gene007812:CDS | 30.0% | |
| TTAACACCGTAAGGAAAAAA+CGG | - | chr8.1:53822270-53822289 | None:intergenic | 30.0% | |
| ! | ATTAATAGGTGTTCCAGTTT+TGG | - | chr8.1:53822673-53822692 | None:intergenic | 30.0% |
| ! | GTCAAAAGTGTAGCATTAAT+AGG | - | chr8.1:53822687-53822706 | None:intergenic | 30.0% |
| ! | TGTTGCTCTTTTTACTAGTT+TGG | + | chr8.1:53822725-53822744 | MS.gene007812:CDS | 30.0% |
| ! | TTAATAGGTGTTCCAGTTTT+GGG | - | chr8.1:53822672-53822691 | None:intergenic | 30.0% |
| ! | TTTTGATATGGTTGCAACTA+TGG | + | chr8.1:53822335-53822354 | MS.gene007812:CDS | 30.0% |
| !! | ATTGTGATCGGTTTTATACA+TGG | + | chr8.1:53822225-53822244 | MS.gene007812:CDS | 30.0% |
| !! | TTGTGTTTGTTTGTTGTTGT+TGG | + | chr8.1:53822873-53822892 | MS.gene007812:CDS | 30.0% |
| !! | TTTAGGTTCTTGATTTGTAC+TGG | + | chr8.1:53823116-53823135 | MS.gene007812:CDS | 30.0% |
| !!! | GTGGTTTTGTTAATCACTAA+CGG | + | chr8.1:53822120-53822139 | MS.gene007812:CDS | 30.0% |
| !!! | TCAGTTGCTTTTGTTCAAAT+TGG | + | chr8.1:53822501-53822520 | MS.gene007812:CDS | 30.0% |
| !!! | TTAACACCGTTTTTTCCTTA+CGG | + | chr8.1:53822261-53822280 | MS.gene007812:CDS | 30.0% |
| !!! | TTTTTTCCTTACGGTGTTAA+AGG | + | chr8.1:53822270-53822289 | MS.gene007812:CDS | 30.0% |
| AAAACACCTTTAACACCGTA+AGG | - | chr8.1:53822279-53822298 | None:intergenic | 35.0% | |
| AAGTATAGTGAGATTGATGC+TGG | + | chr8.1:53822468-53822487 | MS.gene007812:CDS | 35.0% | |
| AGTTGCAACCATATCAAAAC+CGG | - | chr8.1:53822334-53822353 | None:intergenic | 35.0% | |
| ATATTATGGGAGGGAATCAA+CGG | + | chr8.1:53822824-53822843 | MS.gene007812:CDS | 35.0% | |
| ATCAAACCGTGAAGAGATAA+TGG | + | chr8.1:53823211-53823230 | MS.gene007812:CDS | 35.0% | |
| CCAATAGGTATATCTCTTGA+AGG | - | chr8.1:53822378-53822397 | None:intergenic | 35.0% | |
| CCTTCAAGAGATATACCTAT+TGG | + | chr8.1:53822375-53822394 | MS.gene007812:CDS | 35.0% | |
| GGGATGAATAAGTGCAAAAA+AGG | - | chr8.1:53822652-53822671 | None:intergenic | 35.0% | |
| TATGATGTGGATCATGGAAT+TGG | + | chr8.1:53823182-53823201 | MS.gene007812:CDS | 35.0% | |
| TGAATAAGTGCAAAAAAGGG+TGG | - | chr8.1:53822648-53822667 | None:intergenic | 35.0% | |
| TGCTTGTGAGGAGATATTAT+GGG | + | chr8.1:53822811-53822830 | MS.gene007812:CDS | 35.0% | |
| TGTTCATGCAACTTATGATG+TGG | + | chr8.1:53823169-53823188 | MS.gene007812:CDS | 35.0% | |
| TTGCTTGTGAGGAGATATTA+TGG | + | chr8.1:53822810-53822829 | MS.gene007812:CDS | 35.0% | |
| ! | ATGACAACAAGTTTGCTTGT+TGG | + | chr8.1:53822570-53822589 | MS.gene007812:CDS | 35.0% |
| ! | CTTTTTCTCATGGGATCATT+GGG | + | chr8.1:53823080-53823099 | MS.gene007812:CDS | 35.0% |
| ! | GTGAGTATTTGTGCTTTGAA+AGG | + | chr8.1:53822546-53822565 | MS.gene007812:CDS | 35.0% |
| ! | TGACAACAAGTTTGCTTGTT+GGG | + | chr8.1:53822571-53822590 | MS.gene007812:CDS | 35.0% |
| !! | CTATGGAATTCTGGTTTGTT+TGG | + | chr8.1:53822918-53822937 | MS.gene007812:CDS | 35.0% |
| !!! | ATGGAATTTTCACTGGCTTT+GGG | - | chr8.1:53821685-53821704 | None:intergenic | 35.0% |
| !!! | GTCTTATACCGGTTTTGATA+TGG | + | chr8.1:53822323-53822342 | MS.gene007812:CDS | 35.0% |
| !!! | TGGGTTATGAGGCTTTTTTT+AGG | + | chr8.1:53823099-53823118 | MS.gene007812:CDS | 35.0% |
| AACAAAACCACAACGGCTAA+TGG | - | chr8.1:53822111-53822130 | None:intergenic | 40.0% | |
| ATTCTCCTTGAAGCTCTTGT+TGG | + | chr8.1:53821970-53821989 | MS.gene007812:CDS | 40.0% | |
| ATTGAAACGAGCTTCTTGAC+CGG | - | chr8.1:53821785-53821804 | None:intergenic | 40.0% | |
| CAACGGATAAGAGTGATTTG+TGG | + | chr8.1:53822841-53822860 | MS.gene007812:CDS | 40.0% | |
| CACCTTCCATTATCTCTTCA+CGG | - | chr8.1:53823220-53823239 | None:intergenic | 40.0% | |
| CCAATGATCCCATGAGAAAA+AGG | - | chr8.1:53823082-53823101 | None:intergenic | 40.0% | |
| GAATTCAGCGTAGATGAAAG+CGG | - | chr8.1:53821863-53821882 | None:intergenic | 40.0% | |
| GCAACTTATGATGTGGATCA+TGG | + | chr8.1:53823176-53823195 | MS.gene007812:CDS | 40.0% | |
| GCACTTATTCATCCCAAAAC+TGG | + | chr8.1:53822657-53822676 | MS.gene007812:CDS | 40.0% | |
| GGTACACTACTCAAATTGCA+AGG | + | chr8.1:53822610-53822629 | MS.gene007812:CDS | 40.0% | |
| GTTAATCACTAACGGAATCG+CGG | + | chr8.1:53822128-53822147 | MS.gene007812:CDS | 40.0% | |
| GTTCATGAGAGTCTGTTGAT+CGG | - | chr8.1:53821651-53821670 | None:intergenic | 40.0% | |
| TCATTCCTGAGAATCGAACT+CGG | + | chr8.1:53821916-53821935 | MS.gene007812:CDS | 40.0% | |
| TGGATCGAGCATATTGAAAC+CGG | - | chr8.1:53822091-53822110 | None:intergenic | 40.0% | |
| TGTGAGGAGATATTATGGGA+GGG | + | chr8.1:53822815-53822834 | MS.gene007812:CDS | 40.0% | |
| TTCGTCGCAATTGACAATGA+TGG | - | chr8.1:53823059-53823078 | None:intergenic | 40.0% | |
| TTGTGAGGAGATATTATGGG+AGG | + | chr8.1:53822814-53822833 | MS.gene007812:CDS | 40.0% | |
| TTTCTTGCTTTCATTGCTGC+TGG | + | chr8.1:53821943-53821962 | MS.gene007812:CDS | 40.0% | |
| ! | AAGTTTGCTTGTTGGGTCAA+TGG | + | chr8.1:53822578-53822597 | MS.gene007812:CDS | 40.0% |
| ! | ACGAGTCATGGAATTTTCAC+TGG | - | chr8.1:53821692-53821711 | None:intergenic | 40.0% |
| ! | AGTTTGCTTGTTGGGTCAAT+GGG | + | chr8.1:53822579-53822598 | MS.gene007812:CDS | 40.0% |
| ! | CCTTTTTCTCATGGGATCAT+TGG | + | chr8.1:53823079-53823098 | MS.gene007812:CDS | 40.0% |
| ! | GGATAAGAGTGATTTGTGGA+AGG | + | chr8.1:53822845-53822864 | MS.gene007812:CDS | 40.0% |
| !! | AACCGTGAAGAGATAATGGA+AGG | + | chr8.1:53823215-53823234 | MS.gene007812:CDS | 40.0% |
| !! | CTGGTTTGTTTGGTTGGATT+GGG | + | chr8.1:53822928-53822947 | MS.gene007812:CDS | 40.0% |
| !! | GCATATGAGAGGATAATGGA+AGG | - | chr8.1:53821814-53821833 | None:intergenic | 40.0% |
| !! | GGAATTCTGGTTTGTTTGGT+TGG | + | chr8.1:53822922-53822941 | MS.gene007812:CDS | 40.0% |
| !! | GTCGTGTATTGGTCTTATAC+CGG | + | chr8.1:53822312-53822331 | MS.gene007812:CDS | 40.0% |
| !! | TCTGGTTTGTTTGGTTGGAT+TGG | + | chr8.1:53822927-53822946 | MS.gene007812:CDS | 40.0% |
| !! | TTGTTGGTTCTTGTGTTGCT+GGG | + | chr8.1:53822889-53822908 | MS.gene007812:CDS | 40.0% |
| !!! | AATTTTCACTGGCTTTGGGA+AGG | - | chr8.1:53821681-53821700 | None:intergenic | 40.0% |
| !!! | CATGGAATTTTCACTGGCTT+TGG | - | chr8.1:53821686-53821705 | None:intergenic | 40.0% |
| AATCACCGAGTTCGATTCTC+AGG | - | chr8.1:53821924-53821943 | None:intergenic | 45.0% | |
| ATACAGTGGCTGCTTGTGTT+TGG | + | chr8.1:53822952-53822971 | MS.gene007812:CDS | 45.0% | |
| ATTGACAATGATGGCACCCA+CGG | - | chr8.1:53823050-53823069 | None:intergenic | 45.0% | |
| CAAGAAGCTCGTTTCAATGC+TGG | + | chr8.1:53821787-53821806 | MS.gene007812:CDS | 45.0% | |
| CATGGGATCATTGGGTTATG+AGG | + | chr8.1:53823088-53823107 | MS.gene007812:CDS | 45.0% | |
| CCAGAACCATCTTTCCAAAC+CGG | + | chr8.1:53821565-53821584 | MS.gene007812:CDS | 45.0% | |
| CGCTGCATATGAGAGGATAA+TGG | - | chr8.1:53821818-53821837 | None:intergenic | 45.0% | |
| CTTCAAAACCACGAAGCTAC+TGG | + | chr8.1:53821518-53821537 | MS.gene007812:CDS | 45.0% | |
| GATGAAAGCGGAAAGAAGAG+CGG | - | chr8.1:53821851-53821870 | None:intergenic | 45.0% | |
| TGGCTATTGCATTGCTTGTG+AGG | + | chr8.1:53822799-53822818 | MS.gene007812:CDS | 45.0% | |
| ! | CTGTTGATCGGTTTAGGAGA+CGG | - | chr8.1:53821639-53821658 | None:intergenic | 45.0% |
| ! | GAGAGTCTGTTGATCGGTTT+AGG | - | chr8.1:53821645-53821664 | None:intergenic | 45.0% |
| ! | GCGACGAACCTTTTTCTCAT+GGG | + | chr8.1:53823071-53823090 | MS.gene007812:CDS | 45.0% |
| ! | TGAGTTTGCTTCCGAAGAAG+AGG | + | chr8.1:53822994-53823013 | MS.gene007812:CDS | 45.0% |
| ! | TGCGACGAACCTTTTTCTCA+TGG | + | chr8.1:53823070-53823089 | MS.gene007812:CDS | 45.0% |
| ! | TGGTTGGATTGGGTATACAG+TGG | + | chr8.1:53822938-53822957 | MS.gene007812:CDS | 45.0% |
| !! | GGCATTGGCACTTGTGAATA+TGG | + | chr8.1:53822443-53822462 | MS.gene007812:CDS | 45.0% |
| !! | GTTGTTGGTTCTTGTGTTGC+TGG | + | chr8.1:53822888-53822907 | MS.gene007812:CDS | 45.0% |
| !! | GTTTCTCCGGTTTGGAAAGA+TGG | - | chr8.1:53821574-53821593 | None:intergenic | 45.0% |
| !!! | GGCTGCTTGTGTTTGGTTTT+TGG | + | chr8.1:53822959-53822978 | MS.gene007812:CDS | 45.0% |
| AACCTGACGCTGCATATGAG+AGG | - | chr8.1:53821825-53821844 | None:intergenic | 50.0% | |
| AAGAGGCAACCGAAGGTTTG+GGG | + | chr8.1:53823011-53823030 | MS.gene007812:CDS | 50.0% | |
| ACCGGCAACAGGAACTTCAA+CGG | - | chr8.1:53821887-53821906 | None:intergenic | 50.0% | |
| ACCTTCGGTTGCCTCTTCTT+CGG | - | chr8.1:53823008-53823027 | None:intergenic | 50.0% | |
| AGAAGAGGCAACCGAAGGTT+TGG | + | chr8.1:53823009-53823028 | MS.gene007812:CDS | 50.0% | |
| AGGTTAAGTCCCACCAAGTG+AGG | - | chr8.1:53821717-53821736 | None:intergenic | 50.0% | |
| ATCCTCTCATATGCAGCGTC+AGG | + | chr8.1:53821820-53821839 | MS.gene007812:CDS | 50.0% | |
| CAGCACCAACAAGAGCTTCA+AGG | - | chr8.1:53821978-53821997 | None:intergenic | 50.0% | |
| CAGGAATGAAAACGAGCCAC+CGG | - | chr8.1:53821905-53821924 | None:intergenic | 50.0% | |
| GAAGAGGCAACCGAAGGTTT+GGG | + | chr8.1:53823010-53823029 | MS.gene007812:CDS | 50.0% | |
| TTCGGTAGGTTTCTCCGGTT+TGG | - | chr8.1:53821582-53821601 | None:intergenic | 50.0% | |
| TTGGGTCAATGGGACAAGCT+AGG | + | chr8.1:53822589-53822608 | MS.gene007812:CDS | 50.0% | |
| ! | AGGAGACGGTCTTTTAGACG+TGG | - | chr8.1:53821625-53821644 | None:intergenic | 50.0% |
| ! | AGGTGTTTGCTAAGGCGGTT+CGG | - | chr8.1:53821600-53821619 | None:intergenic | 50.0% |
| ! | GACTTAACCTGGCTCGCTTT+CGG | + | chr8.1:53821727-53821746 | MS.gene007812:CDS | 50.0% |
| ! | GGAGACGGTCTTTTAGACGT+GGG | - | chr8.1:53821624-53821643 | None:intergenic | 50.0% |
| ! | TCACTTGGTGGGACTTAACC+TGG | + | chr8.1:53821716-53821735 | MS.gene007812:CDS | 50.0% |
| !! | CCGGTTTGGAAAGATGGTTC+TGG | - | chr8.1:53821568-53821587 | None:intergenic | 50.0% |
| !!! | GCTTCGTGGTTTTGAAGCTG+CGG | - | chr8.1:53821515-53821534 | None:intergenic | 50.0% |
| AACCACGAAGCTACTGGCGA+TGG | + | chr8.1:53821524-53821543 | MS.gene007812:CDS | 55.0% | |
| AACGGAACCCCCCAAACCTT+CGG | - | chr8.1:53823023-53823042 | None:intergenic | 55.0% | |
| ACCGGTGACGACGAAGATAC+CGG | - | chr8.1:53821767-53821786 | None:intergenic | 55.0% | |
| ACGCTGCAGCTGTCGTGTAT+TGG | + | chr8.1:53822301-53822320 | MS.gene007812:CDS | 55.0% | |
| ACTAACGGAATCGCGGCTAG+TGG | + | chr8.1:53822135-53822154 | MS.gene007812:CDS | 55.0% | |
| AGAGGCAACCGAAGGTTTGG+GGG | + | chr8.1:53823012-53823031 | MS.gene007812:CDS | 55.0% | |
| CCAAGTGAGGCAACGAGTCA+TGG | - | chr8.1:53821704-53821723 | None:intergenic | 55.0% | |
| CCATGACTCGTTGCCTCACT+TGG | + | chr8.1:53821701-53821720 | MS.gene007812:CDS | 55.0% | |
| GACTCGTTGCCTCACTTGGT+GGG | + | chr8.1:53821705-53821724 | MS.gene007812:CDS | 55.0% | |
| GAGGAGGAGGAGGATGATGT+CGG | - | chr8.1:53821478-53821497 | None:intergenic | 55.0% | |
| GCCGTTGAAGTTCCTGTTGC+CGG | + | chr8.1:53821883-53821902 | MS.gene007812:CDS | 55.0% | |
| GCTCGATCCATTAGCCGTTG+TGG | + | chr8.1:53822101-53822120 | MS.gene007812:CDS | 55.0% | |
| GGGACTGCGCTATGGAATTC+TGG | + | chr8.1:53822909-53822928 | MS.gene007812:CDS | 55.0% | |
| GTTGAAGTTCCTGTTGCCGG+TGG | + | chr8.1:53821886-53821905 | MS.gene007812:CDS | 55.0% | |
| TCCGAAGAAGAGGCAACCGA+AGG | + | chr8.1:53823004-53823023 | MS.gene007812:CDS | 55.0% | |
| TCCGGTATCTTCGTCGTCAC+CGG | + | chr8.1:53821763-53821782 | MS.gene007812:CDS | 55.0% | |
| TGACCATGAACGACCGAGAC+CGG | - | chr8.1:53822001-53822020 | None:intergenic | 55.0% | |
| TGACTCGTTGCCTCACTTGG+TGG | + | chr8.1:53821704-53821723 | MS.gene007812:CDS | 55.0% | |
| ! | ACGGTCTTTTAGACGTGGGC+AGG | - | chr8.1:53821620-53821639 | None:intergenic | 55.0% |
| ! | ACGTGGGCAGGTGTTTGCTA+AGG | - | chr8.1:53821608-53821627 | None:intergenic | 55.0% |
| ! | TGGGCAGGTGTTTGCTAAGG+CGG | - | chr8.1:53821605-53821624 | None:intergenic | 55.0% |
| !! | GAAGCTCTTGTTGGTGCTGC+CGG | + | chr8.1:53821979-53821998 | MS.gene007812:CDS | 55.0% |
| !! | GTTTGCTAAGGCGGTTCGGT+AGG | - | chr8.1:53821596-53821615 | None:intergenic | 55.0% |
| !!! | TCGTGGTTTTGAAGCTGCGG+CGG | - | chr8.1:53821512-53821531 | None:intergenic | 55.0% |
| CTCCATCGCCAGTAGCTTCG+TGG | - | chr8.1:53821529-53821548 | None:intergenic | 60.0% | |
| GAAAACGAGCCACCGGCAAC+AGG | - | chr8.1:53821898-53821917 | None:intergenic | 60.0% | |
| GAAGGTTTGGGGGGTTCCGT+TGG | + | chr8.1:53823022-53823041 | MS.gene007812:CDS | 60.0% | |
| GAGGAGGAGGATGATGTCGG+TGG | - | chr8.1:53821475-53821494 | None:intergenic | 60.0% | |
| GAGGCAACCGAAGGTTTGGG+GGG | + | chr8.1:53823013-53823032 | MS.gene007812:CDS | 60.0% | |
| GATGGCACCCACGGAACCAA+CGG | - | chr8.1:53823041-53823060 | None:intergenic | 60.0% | |
| ! | GTGTTGCTGGGACTGCGCTA+TGG | + | chr8.1:53822901-53822920 | MS.gene007812:CDS | 60.0% |
| !! | CTTGTTGGTGCTGCCGGTCT+CGG | + | chr8.1:53821985-53822004 | MS.gene007812:CDS | 60.0% |
| !! | GGCGGTTCGGTAGGTTTCTC+CGG | - | chr8.1:53821587-53821606 | None:intergenic | 60.0% |
| !! | TTCGGCGCTGTCGTTGGTTC+CGG | + | chr8.1:53821745-53821764 | MS.gene007812:CDS | 60.0% |
| !!! | TGGTTTTGAAGCTGCGGCGG+TGG | - | chr8.1:53821509-53821528 | None:intergenic | 60.0% |
| !!! | TTTTGAAGCTGCGGCGGTGG+TGG | - | chr8.1:53821506-53821525 | None:intergenic | 60.0% |
| CTCGCTTTCGGCGCTGTCGT+TGG | + | chr8.1:53821739-53821758 | MS.gene007812:CDS | 65.0% | |
| CTGCCGGTCTCGGTCGTTCA+TGG | + | chr8.1:53821995-53822014 | MS.gene007812:CDS | 65.0% | |
| !! | GGGGGTTCCGTTGGTTCCGT+GGG | + | chr8.1:53823031-53823050 | MS.gene007812:CDS | 65.0% |
| GGTGGTCGTGGAGGAGGAGG+AGG | - | chr8.1:53821488-53821507 | None:intergenic | 70.0% | |
| ! | GACAGCGCCGAAAGCGAGCC+AGG | - | chr8.1:53821737-53821756 | None:intergenic | 70.0% |
| ! | GGTGGTGGTCGTGGAGGAGG+AGG | - | chr8.1:53821491-53821510 | None:intergenic | 70.0% |
| !! | GGGGGGTTCCGTTGGTTCCG+TGG | + | chr8.1:53823030-53823049 | MS.gene007812:CDS | 70.0% |
| ! | AGCTGCGGCGGTGGTGGTCG+TGG | - | chr8.1:53821500-53821519 | None:intergenic | 75.0% |
| ! | GGCGGTGGTGGTCGTGGAGG+AGG | - | chr8.1:53821494-53821513 | None:intergenic | 75.0% |
| ! | TGCGGCGGTGGTGGTCGTGG+AGG | - | chr8.1:53821497-53821516 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 53821466 | 53823250 | 53821466 | ID=MS.gene007812 |
| chr8.1 | mRNA | 53821466 | 53823250 | 53821466 | ID=MS.gene007812.t1;Parent=MS.gene007812 |
| chr8.1 | exon | 53821466 | 53823250 | 53821466 | ID=MS.gene007812.t1.exon1;Parent=MS.gene007812.t1 |
| chr8.1 | CDS | 53821466 | 53823250 | 53821466 | ID=cds.MS.gene007812.t1;Parent=MS.gene007812.t1 |
| Gene Sequence |
| Protein sequence |
