Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32277.t1 | RHN40813.1 | 97 | 566 | 17 | 0 | 21 | 586 | 20 | 585 | 0.00E+00 | 1075.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32277.t1 | Q9SHH0 | 71.9 | 556 | 156 | 0 | 22 | 577 | 23 | 578 | 2.6e-232 | 806.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32277.t1 | A0A396GJV2 | 97.0 | 566 | 17 | 0 | 21 | 586 | 20 | 585 | 0.0e+00 | 1075.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene47928 | MS.gene32277 | PPI |
| MS.gene029217 | MS.gene32277 | PPI |
| MS.gene73119 | MS.gene32277 | PPI |
| MS.gene53499 | MS.gene32277 | PPI |
| MS.gene32277 | MS.gene27966 | PPI |
| MS.gene035805 | MS.gene32277 | PPI |
| MS.gene47931 | MS.gene32277 | PPI |
| MS.gene037356 | MS.gene32277 | PPI |
| MS.gene97346 | MS.gene32277 | PPI |
| MS.gene47930 | MS.gene32277 | PPI |
| MS.gene93135 | MS.gene32277 | PPI |
| MS.gene066439 | MS.gene32277 | PPI |
| MS.gene029219 | MS.gene32277 | PPI |
| MS.gene23912 | MS.gene32277 | PPI |
| MS.gene030905 | MS.gene32277 | PPI |
| MS.gene030907 | MS.gene32277 | PPI |
| MS.gene27967 | MS.gene32277 | PPI |
| MS.gene27969 | MS.gene32277 | PPI |
| MS.gene32277 | MS.gene47929 | PPI |
| MS.gene53498 | MS.gene32277 | PPI |
| MS.gene029093 | MS.gene32277 | PPI |
| MS.gene064542 | MS.gene32277 | PPI |
| MS.gene030903 | MS.gene32277 | PPI |
| MS.gene53496 | MS.gene32277 | PPI |
| MS.gene030906 | MS.gene32277 | PPI |
| MS.gene32277 | MS.gene27968 | PPI |
| MS.gene53497 | MS.gene32277 | PPI |
| MS.gene90825 | MS.gene32277 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32277.t1 | MTR_8g461380 | 96.246 | 586 | 21 | 1 | 1 | 586 | 1 | 585 | 0.0 | 1145 |
| MS.gene32277.t1 | MTR_2g035430 | 60.575 | 591 | 222 | 4 | 10 | 591 | 2 | 590 | 0.0 | 722 |
| MS.gene32277.t1 | MTR_8g089320 | 50.176 | 568 | 279 | 2 | 27 | 590 | 19 | 586 | 0.0 | 581 |
| MS.gene32277.t1 | MTR_8g089360 | 50.268 | 559 | 274 | 3 | 28 | 585 | 25 | 580 | 0.0 | 562 |
| MS.gene32277.t1 | MTR_8g089360 | 50.268 | 559 | 274 | 3 | 28 | 585 | 8 | 563 | 0.0 | 562 |
| MS.gene32277.t1 | MTR_1g030660 | 48.727 | 550 | 280 | 2 | 37 | 585 | 24 | 572 | 0.0 | 549 |
| MS.gene32277.t1 | MTR_6g034535 | 86.475 | 244 | 29 | 1 | 352 | 591 | 68 | 311 | 5.03e-149 | 434 |
| MS.gene32277.t1 | MTR_6g034535 | 66.667 | 96 | 7 | 1 | 106 | 201 | 19 | 89 | 4.76e-28 | 115 |
| MS.gene32277.t1 | MTR_8g089340 | 47.285 | 442 | 228 | 3 | 157 | 593 | 1 | 442 | 2.36e-134 | 401 |
| MS.gene32277.t1 | MTR_1g111740 | 39.825 | 570 | 313 | 7 | 37 | 585 | 7 | 567 | 1.48e-131 | 399 |
| MS.gene32277.t1 | MTR_4g099270 | 38.506 | 522 | 312 | 5 | 64 | 577 | 6 | 526 | 7.56e-106 | 331 |
| MS.gene32277.t1 | MTR_4g099270 | 41.114 | 377 | 218 | 2 | 40 | 412 | 3 | 379 | 9.05e-88 | 279 |
| MS.gene32277.t1 | MTR_4g099270 | 36.386 | 415 | 255 | 5 | 171 | 577 | 1 | 414 | 2.83e-77 | 253 |
| MS.gene32277.t1 | MTR_4g099270 | 40.132 | 304 | 178 | 2 | 40 | 339 | 3 | 306 | 2.28e-64 | 214 |
| MS.gene32277.t1 | MTR_7g007850 | 31.992 | 522 | 316 | 10 | 76 | 577 | 45 | 547 | 4.68e-64 | 221 |
| MS.gene32277.t1 | MTR_7g007850 | 30.699 | 544 | 324 | 11 | 76 | 577 | 45 | 577 | 1.41e-61 | 215 |
| MS.gene32277.t1 | MTR_6g027680 | 31.414 | 382 | 255 | 2 | 80 | 454 | 46 | 427 | 5.07e-61 | 213 |
| MS.gene32277.t1 | MTR_6g027630 | 31.450 | 407 | 269 | 5 | 58 | 454 | 18 | 424 | 1.69e-60 | 212 |
| MS.gene32277.t1 | MTR_6g027630 | 31.450 | 407 | 269 | 5 | 58 | 454 | 18 | 424 | 4.24e-60 | 212 |
| MS.gene32277.t1 | MTR_6g027660 | 30.788 | 406 | 266 | 3 | 56 | 454 | 28 | 425 | 2.98e-59 | 209 |
| MS.gene32277.t1 | MTR_7g086510 | 31.414 | 382 | 255 | 3 | 80 | 454 | 38 | 419 | 6.47e-59 | 209 |
| MS.gene32277.t1 | MTR_6g027650 | 29.484 | 407 | 271 | 4 | 55 | 454 | 20 | 417 | 5.05e-58 | 206 |
| MS.gene32277.t1 | MTR_7g086610 | 31.026 | 390 | 258 | 4 | 74 | 454 | 26 | 413 | 4.06e-57 | 203 |
| MS.gene32277.t1 | MTR_7g007850 | 31.840 | 424 | 272 | 6 | 76 | 487 | 45 | 463 | 1.09e-55 | 198 |
| MS.gene32277.t1 | MTR_7g007850 | 31.840 | 424 | 272 | 6 | 76 | 487 | 45 | 463 | 1.16e-55 | 197 |
| MS.gene32277.t1 | MTR_6g027630 | 31.157 | 337 | 225 | 3 | 125 | 454 | 3 | 339 | 1.58e-48 | 178 |
| MS.gene32277.t1 | MTR_8g089342 | 56.410 | 117 | 51 | 0 | 30 | 146 | 23 | 139 | 4.79e-38 | 138 |
| MS.gene32277.t1 | MTR_6g027670 | 32.911 | 158 | 106 | 0 | 297 | 454 | 1 | 158 | 4.66e-25 | 106 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32277.t1 | AT1G17120 | 70.753 | 571 | 166 | 1 | 19 | 588 | 20 | 590 | 0.0 | 820 |
| MS.gene32277.t1 | AT2G34960 | 62.143 | 560 | 209 | 3 | 20 | 577 | 4 | 562 | 0.0 | 725 |
| MS.gene32277.t1 | AT4G21120 | 51.241 | 564 | 274 | 1 | 28 | 590 | 18 | 581 | 0.0 | 591 |
| MS.gene32277.t1 | AT4G21120 | 49.652 | 431 | 216 | 1 | 161 | 590 | 1 | 431 | 4.98e-147 | 433 |
| MS.gene32277.t1 | AT5G04770 | 40.868 | 553 | 310 | 5 | 38 | 576 | 15 | 564 | 5.76e-129 | 392 |
| MS.gene32277.t1 | AT3G10600 | 39.410 | 576 | 324 | 8 | 35 | 592 | 11 | 579 | 7.11e-128 | 389 |
| MS.gene32277.t1 | AT5G04770 | 43.490 | 384 | 207 | 2 | 38 | 411 | 15 | 398 | 4.04e-97 | 304 |
| MS.gene32277.t1 | AT3G10600 | 37.955 | 440 | 248 | 8 | 171 | 592 | 1 | 433 | 2.92e-89 | 284 |
| MS.gene32277.t1 | AT5G04770 | 39.048 | 420 | 239 | 5 | 171 | 576 | 1 | 417 | 1.59e-84 | 272 |
| MS.gene32277.t1 | AT1G05940 | 30.224 | 536 | 338 | 10 | 76 | 586 | 44 | 568 | 5.22e-61 | 213 |
| MS.gene32277.t1 | AT5G36940 | 29.484 | 407 | 280 | 3 | 55 | 454 | 4 | 410 | 2.71e-59 | 209 |
| MS.gene32277.t1 | AT1G58030 | 30.105 | 382 | 260 | 3 | 80 | 454 | 40 | 421 | 4.66e-57 | 204 |
| MS.gene32277.t1 | AT1G05940 | 31.084 | 489 | 303 | 8 | 76 | 541 | 44 | 521 | 2.87e-56 | 199 |
| MS.gene32277.t1 | AT1G05940 | 31.807 | 415 | 270 | 4 | 76 | 478 | 44 | 457 | 1.17e-55 | 197 |
| MS.gene32277.t1 | AT3G03720 | 28.536 | 403 | 279 | 5 | 60 | 454 | 4 | 405 | 9.65e-53 | 191 |
| MS.gene32277.t1 | AT1G05940 | 29.011 | 455 | 286 | 9 | 156 | 586 | 9 | 450 | 1.36e-44 | 165 |
Find 134 sgRNAs with CRISPR-Local
Find 227 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATATACCTATTGGTTTAAT+TGG | 0.145764 | 8.3:+48896301 | MS.gene32277:CDS |
| CTTTATCATTGTTGCAAAAT+AGG | 0.159095 | 8.3:-48895939 | None:intergenic |
| TTCTTTCCTTACGGTGTTAA+AGG | 0.232045 | 8.3:+48896187 | MS.gene32277:CDS |
| ATTAATAGGTGTTCCAGTTT+TGG | 0.242325 | 8.3:-48896587 | None:intergenic |
| TTGATTGTGAGGAGATATTA+TGG | 0.270784 | 8.3:+48896727 | MS.gene32277:CDS |
| GGCATTGGCACTTGTGAATA+TGG | 0.273952 | 8.3:+48896360 | MS.gene32277:CDS |
| GGGACTGCGCTATGGAATTC+TGG | 0.274074 | 8.3:+48896826 | MS.gene32277:CDS |
| GTTGTTGGTTCTTGTGTTGC+TGG | 0.281893 | 8.3:+48896805 | MS.gene32277:CDS |
| GCCGTTGAAGTTCCTGTTGC+CGG | 0.312047 | 8.3:+48895800 | MS.gene32277:CDS |
| AACAAAACCACAACGGCTAA+TGG | 0.322847 | 8.3:-48896025 | None:intergenic |
| GCACTTATTCATCCCAAAAC+TGG | 0.324146 | 8.3:+48896574 | MS.gene32277:CDS |
| TTGTGTTTGTTTGTTGTTGT+TGG | 0.327089 | 8.3:+48896790 | MS.gene32277:CDS |
| TTGTTCAAATTGGTATGAAA+TGG | 0.328124 | 8.3:+48896428 | MS.gene32277:CDS |
| CCTGTTTGGAAAGATGGTTC+TGG | 0.328232 | 8.3:-48895482 | None:intergenic |
| AACGGTTATTTATTGTTTGA+TGG | 0.330270 | 8.3:+48896339 | MS.gene32277:CDS |
| TGACAACAAGTTTGCTTGTT+GGG | 0.330599 | 8.3:+48896488 | MS.gene32277:CDS |
| CAACGGATAAGAGCGATTTA+TGG | 0.330824 | 8.3:+48896758 | MS.gene32277:CDS |
| CCAATGATCCCATAAGAAAA+AGG | 0.332205 | 8.3:-48896996 | None:intergenic |
| CTGCCGGTCTCGGTCGTTCA+TGG | 0.340474 | 8.3:+48895912 | MS.gene32277:CDS |
| CTTGTTGGTGCTGCCGGTCT+CGG | 0.343843 | 8.3:+48895902 | MS.gene32277:CDS |
| TGTTCAAATTGGTATGAAAT+GGG | 0.344658 | 8.3:+48896429 | MS.gene32277:CDS |
| TTCGGCGCTGTCGTTGGTTC+CGG | 0.347948 | 8.3:+48895662 | MS.gene32277:CDS |
| ATTCTCCTTGAAGCTCTTGT+TGG | 0.364163 | 8.3:+48895887 | MS.gene32277:CDS |
| TTTAGATTCTTGATTTGTAC+TGG | 0.365670 | 8.3:+48897033 | MS.gene32277:CDS |
| CCAGAACCATCTTTCCAAAC+AGG | 0.369698 | 8.3:+48895482 | MS.gene32277:CDS |
| CTATGGAATTCTGGTTTGTT+TGG | 0.375852 | 8.3:+48896835 | MS.gene32277:CDS |
| CTCGCTTTCGGCGCTGTCGT+TGG | 0.378647 | 8.3:+48895656 | MS.gene32277:CDS |
| CCTTCAAGAGATATACCTAT+TGG | 0.381314 | 8.3:+48896292 | MS.gene32277:CDS |
| GTCAAAAGTGTAGCATTAAT+AGG | 0.382938 | 8.3:-48896601 | None:intergenic |
| CAATTTGAAGGGTTGATTGA+TGG | 0.386295 | 8.3:+48897966 | MS.gene32277:CDS |
| GAAGAGGCAACCAAAGGTTT+GGG | 0.387706 | 8.3:+48896927 | MS.gene32277:CDS |
| ACCTTTGGTTGCCTCTTCTT+CGG | 0.388733 | 8.3:-48896922 | None:intergenic |
| TATGGGATCATTGGGTTATG+AGG | 0.391461 | 8.3:+48897005 | MS.gene32277:CDS |
| TCTGGTTTGTTTGGTTGGAT+TGG | 0.392722 | 8.3:+48896844 | MS.gene32277:CDS |
| CACCTTCCATTCTCTCATCA+TGG | 0.395056 | 8.3:-48897134 | None:intergenic |
| AAAAGAAAGTCTGTCACATA+TGG | 0.395557 | 8.3:+48897941 | MS.gene32277:CDS |
| GGAATTCTGGTTTGTTTGGT+TGG | 0.396442 | 8.3:+48896839 | MS.gene32277:CDS |
| GACTTAACCTGGCTCGCTTT+CGG | 0.398071 | 8.3:+48895644 | MS.gene32277:CDS |
| AAGTTTGCTTGTTGGGTCAA+TGG | 0.398278 | 8.3:+48896495 | MS.gene32277:CDS |
| TTTGGTATGCTATATGTCAT+TGG | 0.398593 | 8.3:+48897895 | MS.gene32277:CDS |
| TTTCTTGCTTTCATTGCTGC+TGG | 0.398831 | 8.3:+48895860 | MS.gene32277:CDS |
| AGCTGCGGCGGTGGTGGTCG+TGG | 0.399597 | 8.3:-48895414 | None:intergenic |
| AGAAGAGGCAACCAAAGGTT+TGG | 0.405906 | 8.3:+48896926 | MS.gene32277:CDS |
| GAAAACGAGCCACCGGCAAC+AGG | 0.406244 | 8.3:-48895812 | None:intergenic |
| CTCCATCGCCAGTAGCTTCG+TGG | 0.408798 | 8.3:-48895443 | None:intergenic |
| GACAGCGCCGAAAGCGAGCC+AGG | 0.411784 | 8.3:-48895651 | None:intergenic |
| AATCACCGAGTTCGATTCTC+AGG | 0.413491 | 8.3:-48895838 | None:intergenic |
| TATTTATTGTTTGATGGCAT+TGG | 0.415152 | 8.3:+48896345 | MS.gene32277:CDS |
| GGTGGTGGTCGTGGAGGAGG+AGG | 0.415763 | 8.3:-48895405 | None:intergenic |
| TTGTTGGTTCTTGTGTTGCT+GGG | 0.417278 | 8.3:+48896806 | MS.gene32277:CDS |
| AGTTTGCTTGTTGGGTCAAT+GGG | 0.420169 | 8.3:+48896496 | MS.gene32277:CDS |
| ATTGAACCAATTAAACCAAT+AGG | 0.426832 | 8.3:-48896307 | None:intergenic |
| TTAACACCGTTCTTTCCTTA+CGG | 0.428643 | 8.3:+48896178 | MS.gene32277:CDS |
| CCAATAGGTATATCTCTTGA+AGG | 0.429939 | 8.3:-48896292 | None:intergenic |
| GGTGGTCGTGGAGGAGGAGG+AGG | 0.431865 | 8.3:-48895402 | None:intergenic |
| TCATGACTCGTTGCCTCACT+TGG | 0.434445 | 8.3:+48895618 | MS.gene32277:CDS |
| ATACCGTGGCTGCTTGTGTT+TGG | 0.437593 | 8.3:+48896869 | MS.gene32277:CDS |
| CGCTGCATATGAGAGGATAA+TGG | 0.438614 | 8.3:-48895732 | None:intergenic |
| ATGCTGCAGCTGTCGTGTAT+TGG | 0.438981 | 8.3:+48896218 | MS.gene32277:CDS |
| GGCGGTGGTGGTCGTGGAGG+AGG | 0.442173 | 8.3:-48895408 | None:intergenic |
| ATCCTCTCATATGCAGCGTC+AGG | 0.442530 | 8.3:+48895737 | MS.gene32277:CDS |
| ATGCTATATGTCATTGGATT+GGG | 0.451239 | 8.3:+48897901 | MS.gene32277:CDS |
| TCACTTGGTGGGACTTAACC+TGG | 0.456437 | 8.3:+48895633 | MS.gene32277:CDS |
| TGATTGTGAGGAGATATTAT+GGG | 0.459724 | 8.3:+48896728 | MS.gene32277:CDS |
| GAAGCTCTTGTTGGTGCTGC+CGG | 0.460471 | 8.3:+48895896 | MS.gene32277:CDS |
| TGGATCGAGCATATTGAAAC+CGG | 0.463832 | 8.3:-48896005 | None:intergenic |
| TGGTTCAATGTCTATGATAA+CGG | 0.465812 | 8.3:+48896321 | MS.gene32277:CDS |
| TGACTCGTTGCCTCACTTGG+TGG | 0.468605 | 8.3:+48895621 | MS.gene32277:CDS |
| ATCAAACCATGATGAGAGAA+TGG | 0.480689 | 8.3:+48897128 | MS.gene32277:CDS |
| TCACATATGGAGCAATTTGA+AGG | 0.480913 | 8.3:+48897954 | MS.gene32277:CDS |
| GAGAGTCTGTTGATCGGTTG+AGG | 0.481012 | 8.3:-48895559 | None:intergenic |
| GTCGTGTATTGGTCTTATAC+CGG | 0.481654 | 8.3:+48896229 | MS.gene32277:CDS |
| TCCGGTATCTTCGTCGTCAC+CGG | 0.482639 | 8.3:+48895680 | MS.gene32277:CDS |
| ACCGGTGACGACGAAGATAC+CGG | 0.483231 | 8.3:-48895681 | None:intergenic |
| CTTCAAAACCACGAAGCTAC+TGG | 0.483779 | 8.3:+48895435 | MS.gene32277:CDS |
| GACTCGTTGCCTCACTTGGT+GGG | 0.485706 | 8.3:+48895622 | MS.gene32277:CDS |
| ATGACAACAAGTTTGCTTGT+TGG | 0.486739 | 8.3:+48896487 | MS.gene32277:CDS |
| GCAACTTATGATGTGGATCA+TGG | 0.490232 | 8.3:+48897093 | MS.gene32277:CDS |
| TATGATGTGGATCATGGAAT+TGG | 0.490780 | 8.3:+48897099 | MS.gene32277:CDS |
| AGTTGCAACCATATCAAAAC+CGG | 0.498318 | 8.3:-48896248 | None:intergenic |
| CAAGAAGCTCGTTTCAATGC+TGG | 0.502149 | 8.3:+48895704 | MS.gene32277:CDS |
| GTGAGTATTTGTGCTTTGAA+AGG | 0.502564 | 8.3:+48896463 | MS.gene32277:CDS |
| CAGCACCAACAAGAGCTTCA+AGG | 0.507060 | 8.3:-48895892 | None:intergenic |
| GTTTGCTAAGGCGGTTCGAT+AGG | 0.515786 | 8.3:-48895510 | None:intergenic |
| TGGGCAGGTGTTTGCTAAGG+CGG | 0.516147 | 8.3:-48895519 | None:intergenic |
| CTGTTGATCGGTTGAGGAGA+CGG | 0.523901 | 8.3:-48895553 | None:intergenic |
| TATGCTATATGTCATTGGAT+TGG | 0.525077 | 8.3:+48897900 | MS.gene32277:CDS |
| AAAACACCTTTAACACCGTA+AGG | 0.526823 | 8.3:-48896193 | None:intergenic |
| GTTCAAATTGGTATGAAATG+GGG | 0.527507 | 8.3:+48896430 | MS.gene32277:CDS |
| GCGTGGGCAGGTGTTTGCTA+AGG | 0.532196 | 8.3:-48895522 | None:intergenic |
| GCTCGATCCATTAGCCGTTG+TGG | 0.536314 | 8.3:+48896018 | MS.gene32277:CDS |
| TGACCATGAACGACCGAGAC+CGG | 0.540172 | 8.3:-48895915 | None:intergenic |
| GTGTTGCTGGGACTGCGCTA+TGG | 0.541923 | 8.3:+48896818 | MS.gene32277:CDS |
| ATCGACAATGATGGCACCCA+TGG | 0.546905 | 8.3:-48896964 | None:intergenic |
| ATTGAAACGAGCTTCTTGAC+CGG | 0.547155 | 8.3:-48895699 | None:intergenic |
| TGAGTTTGCTTCCGAAGAAG+AGG | 0.551130 | 8.3:+48896911 | MS.gene32277:CDS |
| TTGGGTCAATGGGACAAGCT+AGG | 0.554068 | 8.3:+48896506 | MS.gene32277:CDS |
| ACTAACGGAATCGCGGCTAG+TGG | 0.559727 | 8.3:+48896052 | MS.gene32277:CDS |
| TGTGAGGAGATATTATGGGA+GGG | 0.562883 | 8.3:+48896732 | MS.gene32277:CDS |
| GGTTGATTGATGGCAAGAAA+CGG | 0.573148 | 8.3:+48897976 | MS.gene32277:CDS |
| TGCGGCGGTGGTGGTCGTGG+AGG | 0.574346 | 8.3:-48895411 | None:intergenic |
| AAGAGGCAACCAAAGGTTTG+GGG | 0.576079 | 8.3:+48896928 | MS.gene32277:CDS |
| CAATAGGTATATCTCTTGAA+GGG | 0.579389 | 8.3:-48896291 | None:intergenic |
| TTGTGAGGAGATATTATGGG+AGG | 0.581589 | 8.3:+48896731 | MS.gene32277:CDS |
| AGAGGCAACCAAAGGTTTGG+GGG | 0.584028 | 8.3:+48896929 | MS.gene32277:CDS |
| CAGGAATGAAAACGAGCCAC+CGG | 0.587952 | 8.3:-48895819 | None:intergenic |
| TCCGAAGAAGAGGCAACCAA+AGG | 0.591614 | 8.3:+48896921 | MS.gene32277:CDS |
| AACCATGATGAGAGAATGGA+AGG | 0.591931 | 8.3:+48897132 | MS.gene32277:CDS |
| GTTGAAGTTCCTGTTGCCGG+TGG | 0.592442 | 8.3:+48895803 | MS.gene32277:CDS |
| GATGGCACCCATGGAACCAA+CGG | 0.594938 | 8.3:-48896955 | None:intergenic |
| AAGTATAGTGAGATTGATGC+TGG | 0.595966 | 8.3:+48896385 | MS.gene32277:CDS |
| GAGGAGGAGGAGGATGATGT+CGG | 0.597641 | 8.3:-48895392 | None:intergenic |
| AACCACGAAGCTACTGGCGA+TGG | 0.600504 | 8.3:+48895441 | MS.gene32277:CDS |
| CACATATGGAGCAATTTGAA+GGG | 0.602316 | 8.3:+48897955 | MS.gene32277:CDS |
| GAGGAGGAGGATGATGTCGG+TGG | 0.603081 | 8.3:-48895389 | None:intergenic |
| ATATTATGGGAGGGAATCAA+CGG | 0.605663 | 8.3:+48896741 | MS.gene32277:CDS |
| TGGCTATTGCGTTGATTGTG+AGG | 0.607141 | 8.3:+48896716 | MS.gene32277:CDS |
| TTCGTCGCAATCGACAATGA+TGG | 0.608279 | 8.3:-48896973 | None:intergenic |
| GGATAAGAGCGATTTATGGA+AGG | 0.608757 | 8.3:+48896762 | MS.gene32277:CDS |
| AAACCAAACACAAGCAGCCA+CGG | 0.609702 | 8.3:-48896872 | None:intergenic |
| AGGTTAAGTCCCACCAAGTG+AGG | 0.616937 | 8.3:-48895631 | None:intergenic |
| AACCTGACGCTGCATATGAG+AGG | 0.617228 | 8.3:-48895739 | None:intergenic |
| ACCGGCAACAGGAACTTCAA+CGG | 0.628727 | 8.3:-48895801 | None:intergenic |
| GTTAATCACTAACGGAATCG+CGG | 0.635124 | 8.3:+48896045 | MS.gene32277:CDS |
| GTTCATGAGAGTCTGTTGAT+CGG | 0.635369 | 8.3:-48895565 | None:intergenic |
| TCATTCCTGAGAATCGAACT+CGG | 0.639210 | 8.3:+48895833 | MS.gene32277:CDS |
| TTAACACCGTAAGGAAAGAA+CGG | 0.656749 | 8.3:-48896184 | None:intergenic |
| GAGGCAACCAAAGGTTTGGG+GGG | 0.658204 | 8.3:+48896930 | MS.gene32277:CDS |
| GCATATGAGAGGATAATGGA+AGG | 0.658306 | 8.3:-48895728 | None:intergenic |
| TGTTCATGCAACTTATGATG+TGG | 0.672047 | 8.3:+48897086 | MS.gene32277:CDS |
| GATGAAAGCGGAAAGAAGAG+CGG | 0.683982 | 8.3:-48895765 | None:intergenic |
| GAATTCAGCGTAGATGAAAG+CGG | 0.686074 | 8.3:-48895777 | None:intergenic |
| TGGTTGGATTGGTTATACCG+TGG | 0.704461 | 8.3:+48896855 | MS.gene32277:CDS |
| AGTGATTAACAAAACCACAA+CGG | 0.729960 | 8.3:-48896032 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTATTATTTTGTTTTTTGA+TGG | - | chr8.3:48897575-48897594 | None:intergenic | 10.0% |
| !! | TATTATTATTGACATTGTTT+GGG | - | chr8.3:48897532-48897551 | None:intergenic | 15.0% |
| !! | TTATTATTATTGACATTGTT+TGG | - | chr8.3:48897533-48897552 | None:intergenic | 15.0% |
| !! | TTGACATATATATTAATAGA+TGG | - | chr8.3:48897304-48897323 | None:intergenic | 15.0% |
| !!! | ATTGTTACAACTTTTATTAT+CGG | + | chr8.3:48896112-48896131 | MS.gene32277:CDS | 15.0% |
| !!! | CTTTTGTATTATTTATTTGT+GGG | + | chr8.3:48897063-48897082 | MS.gene32277:CDS | 15.0% |
| !!! | TGATTTTTTTTAATGAAGAA+TGG | - | chr8.3:48897606-48897625 | None:intergenic | 15.0% |
| !! | ATTATTATTGACATTGTTTG+GGG | - | chr8.3:48897531-48897550 | None:intergenic | 20.0% |
| !! | CACACTAATCAATAAATATA+TGG | - | chr8.3:48897349-48897368 | None:intergenic | 20.0% |
| !! | TCTTTATTGGAAAAAAAATG+TGG | + | chr8.3:48897268-48897287 | MS.gene32277:intron | 20.0% |
| !!! | GCTTTTGTATTATTTATTTG+TGG | + | chr8.3:48897062-48897081 | MS.gene32277:CDS | 20.0% |
| !!! | TCTTTTCATTTTTATGCTTA+TGG | + | chr8.3:48896696-48896715 | MS.gene32277:CDS | 20.0% |
| !!! | TGTTAAAGTTACTTTATTGT+TGG | + | chr8.3:48897464-48897483 | MS.gene32277:intron | 20.0% |
| ! | AAATCACTAAAGATTTGTGA+GGG | + | chr8.3:48897816-48897835 | MS.gene32277:intron | 25.0% |
| ! | AACGGTTATTTATTGTTTGA+TGG | + | chr8.3:48896339-48896358 | MS.gene32277:CDS | 25.0% |
| ! | AATATATGGAGCTAATCATT+TGG | - | chr8.3:48897335-48897354 | None:intergenic | 25.0% |
| ! | AGTTAAGTCTTTATGGTAAT+TGG | + | chr8.3:48897193-48897212 | MS.gene32277:intron | 25.0% |
| ! | ATATATGGAGCTAATCATTT+GGG | - | chr8.3:48897334-48897353 | None:intergenic | 25.0% |
| ! | ATTGAACCAATTAAACCAAT+AGG | - | chr8.3:48896310-48896329 | None:intergenic | 25.0% |
| ! | ATTGCTTTGATATCAATGAT+AGG | - | chr8.3:48897675-48897694 | None:intergenic | 25.0% |
| ! | CACAAATCTTTAGTGATTTA+AGG | - | chr8.3:48897815-48897834 | None:intergenic | 25.0% |
| ! | CTTTATCATTGTTGCAAAAT+AGG | - | chr8.3:48895942-48895961 | None:intergenic | 25.0% |
| ! | GAAAAACATCTATCTTAACA+TGG | + | chr8.3:48896080-48896099 | MS.gene32277:CDS | 25.0% |
| ! | TAAATCACTAAAGATTTGTG+AGG | + | chr8.3:48897815-48897834 | MS.gene32277:intron | 25.0% |
| ! | TATGATCCACATAAATTTAG+TGG | + | chr8.3:48897695-48897714 | MS.gene32277:intron | 25.0% |
| ! | TGTTCAAATTGGTATGAAAT+GGG | + | chr8.3:48896429-48896448 | MS.gene32277:CDS | 25.0% |
| ! | TTGTTCAAATTGGTATGAAA+TGG | + | chr8.3:48896428-48896447 | MS.gene32277:CDS | 25.0% |
| !! | AGTGATTTAAGGTACAAAAT+TGG | - | chr8.3:48897804-48897823 | None:intergenic | 25.0% |
| !! | TATGACTTGTAATTCACAAT+TGG | - | chr8.3:48897242-48897261 | None:intergenic | 25.0% |
| !! | TATTTATTGTTTGATGGCAT+TGG | + | chr8.3:48896345-48896364 | MS.gene32277:CDS | 25.0% |
| !!! | AGAACGATTCTGATTTTTTT+CGG | + | chr8.3:48895960-48895979 | MS.gene32277:CDS | 25.0% |
| !!! | ATCGGTTTTATTATTGTGAT+CGG | + | chr8.3:48896130-48896149 | MS.gene32277:CDS | 25.0% |
| !!! | CGAATTGATTCTTTTAAAAC+CGG | + | chr8.3:48895986-48896005 | MS.gene32277:CDS | 25.0% |
| !!! | CGGTTTTAAAAGAATCAATT+CGG | - | chr8.3:48895988-48896007 | None:intergenic | 25.0% |
| !!! | GATATACCTATTGGTTTAAT+TGG | + | chr8.3:48896301-48896320 | MS.gene32277:CDS | 25.0% |
| !!! | TTTAGATTCTTGATTTGTAC+TGG | + | chr8.3:48897033-48897052 | MS.gene32277:CDS | 25.0% |
| AAAAGAAAGTCTGTCACATA+TGG | + | chr8.3:48897941-48897960 | MS.gene32277:CDS | 30.0% | |
| ACATAAATTTAGTGGTTGTG+CGG | + | chr8.3:48897703-48897722 | MS.gene32277:intron | 30.0% | |
| AGTCATAACAAGCTCTTTAT+TGG | + | chr8.3:48897255-48897274 | MS.gene32277:intron | 30.0% | |
| AGTGATTAACAAAACCACAA+CGG | - | chr8.3:48896035-48896054 | None:intergenic | 30.0% | |
| ATGCTATATGTCATTGGATT+GGG | + | chr8.3:48897901-48897920 | MS.gene32277:CDS | 30.0% | |
| ATTTCTTACCCACTTATCAA+AGG | + | chr8.3:48897649-48897668 | MS.gene32277:intron | 30.0% | |
| CAAGAAGAGTTAAGTCTTTA+TGG | + | chr8.3:48897186-48897205 | MS.gene32277:intron | 30.0% | |
| CAATAGGTATATCTCTTGAA+GGG | - | chr8.3:48896294-48896313 | None:intergenic | 30.0% | |
| GGATGAATAAGTGCAAAAAA+GGG | - | chr8.3:48896568-48896587 | None:intergenic | 30.0% | |
| GTTCAAATTGGTATGAAATG+GGG | + | chr8.3:48896430-48896449 | MS.gene32277:CDS | 30.0% | |
| TATGCTATATGTCATTGGAT+TGG | + | chr8.3:48897900-48897919 | MS.gene32277:CDS | 30.0% | |
| TCTTGATTCCACAACAAATA+GGG | - | chr8.3:48897171-48897190 | None:intergenic | 30.0% | |
| TGATTGTGAGGAGATATTAT+GGG | + | chr8.3:48896728-48896747 | MS.gene32277:CDS | 30.0% | |
| TGGTTCAATGTCTATGATAA+CGG | + | chr8.3:48896321-48896340 | MS.gene32277:CDS | 30.0% | |
| TTCTTGATTCCACAACAAAT+AGG | - | chr8.3:48897172-48897191 | None:intergenic | 30.0% | |
| TTGATTGTGAGGAGATATTA+TGG | + | chr8.3:48896727-48896746 | MS.gene32277:CDS | 30.0% | |
| TTTGGTATGCTATATGTCAT+TGG | + | chr8.3:48897895-48897914 | MS.gene32277:CDS | 30.0% | |
| ! | ATTAATAGGTGTTCCAGTTT+TGG | - | chr8.3:48896590-48896609 | None:intergenic | 30.0% |
| ! | CTTTTTCTTATGGGATCATT+GGG | + | chr8.3:48896997-48897016 | MS.gene32277:CDS | 30.0% |
| ! | GTCAAAAGTGTAGCATTAAT+AGG | - | chr8.3:48896604-48896623 | None:intergenic | 30.0% |
| ! | TGTTGCTCTTTTTACTAGTT+TGG | + | chr8.3:48896642-48896661 | MS.gene32277:CDS | 30.0% |
| ! | TTAATAGGTGTTCCAGTTTT+GGG | - | chr8.3:48896589-48896608 | None:intergenic | 30.0% |
| ! | TTTTGATATGGTTGCAACTA+TGG | + | chr8.3:48896252-48896271 | MS.gene32277:CDS | 30.0% |
| !! | ATTGTGATCGGTTTTATACA+CGG | + | chr8.3:48896142-48896161 | MS.gene32277:CDS | 30.0% |
| !! | TTGTGTTTGTTTGTTGTTGT+TGG | + | chr8.3:48896790-48896809 | MS.gene32277:CDS | 30.0% |
| !!! | ATGAAATTTTCACTGGCTTT+GGG | - | chr8.3:48895602-48895621 | None:intergenic | 30.0% |
| !!! | GTGGTTTTGTTAATCACTAA+CGG | + | chr8.3:48896037-48896056 | MS.gene32277:CDS | 30.0% |
| !!! | TCAGTTGCTTTTGTTCAAAT+TGG | + | chr8.3:48896418-48896437 | MS.gene32277:CDS | 30.0% |
| AAAACACCTTTAACACCGTA+AGG | - | chr8.3:48896196-48896215 | None:intergenic | 35.0% | |
| AAGTATAGTGAGATTGATGC+TGG | + | chr8.3:48896385-48896404 | MS.gene32277:CDS | 35.0% | |
| AATGATAGGCCTTTGATAAG+TGG | - | chr8.3:48897661-48897680 | None:intergenic | 35.0% | |
| ACATTGCTTCCGTTATAACT+TGG | - | chr8.3:48897763-48897782 | None:intergenic | 35.0% | |
| AGTTGCAACCATATCAAAAC+CGG | - | chr8.3:48896251-48896270 | None:intergenic | 35.0% | |
| ATATTATGGGAGGGAATCAA+CGG | + | chr8.3:48896741-48896760 | MS.gene32277:CDS | 35.0% | |
| ATCAAACCATGATGAGAGAA+TGG | + | chr8.3:48897128-48897147 | MS.gene32277:CDS | 35.0% | |
| ATGATAGGCCTTTGATAAGT+GGG | - | chr8.3:48897660-48897679 | None:intergenic | 35.0% | |
| CAACAAATAGGGCTAAACTA+TGG | - | chr8.3:48897160-48897179 | None:intergenic | 35.0% | |
| CACATATGGAGCAATTTGAA+GGG | + | chr8.3:48897955-48897974 | MS.gene32277:CDS | 35.0% | |
| CATAAATTTAGTGGTTGTGC+GGG | + | chr8.3:48897704-48897723 | MS.gene32277:intron | 35.0% | |
| CCAATAGGTATATCTCTTGA+AGG | - | chr8.3:48896295-48896314 | None:intergenic | 35.0% | |
| CCAATGATCCCATAAGAAAA+AGG | - | chr8.3:48896999-48897018 | None:intergenic | 35.0% | |
| CCTTCAAGAGATATACCTAT+TGG | + | chr8.3:48896292-48896311 | MS.gene32277:CDS | 35.0% | |
| CTATGCTCTCGAATTCTTAT+AGG | + | chr8.3:48897431-48897450 | MS.gene32277:intron | 35.0% | |
| CTCTCGAATTCTTATAGGAT+TGG | + | chr8.3:48897436-48897455 | MS.gene32277:intron | 35.0% | |
| GATTAGTGTGCTGTGTTAAA+TGG | + | chr8.3:48897359-48897378 | MS.gene32277:intron | 35.0% | |
| GCACAACCACTAAATTTATG+TGG | - | chr8.3:48897704-48897723 | None:intergenic | 35.0% | |
| GGGATGAATAAGTGCAAAAA+AGG | - | chr8.3:48896569-48896588 | None:intergenic | 35.0% | |
| GTAATTGGAGAACAACACTA+TGG | + | chr8.3:48897208-48897227 | MS.gene32277:intron | 35.0% | |
| TACCAAACACCTGAAAATGA+TGG | - | chr8.3:48897882-48897901 | None:intergenic | 35.0% | |
| TATGATGTGGATCATGGAAT+TGG | + | chr8.3:48897099-48897118 | MS.gene32277:CDS | 35.0% | |
| TCACATATGGAGCAATTTGA+AGG | + | chr8.3:48897954-48897973 | MS.gene32277:CDS | 35.0% | |
| TGAATAAGTGCAAAAAAGGG+TGG | - | chr8.3:48896565-48896584 | None:intergenic | 35.0% | |
| TGTTCATGCAACTTATGATG+TGG | + | chr8.3:48897086-48897105 | MS.gene32277:CDS | 35.0% | |
| TTAACACCGTAAGGAAAGAA+CGG | - | chr8.3:48896187-48896206 | None:intergenic | 35.0% | |
| TTAACACCGTTCTTTCCTTA+CGG | + | chr8.3:48896178-48896197 | MS.gene32277:CDS | 35.0% | |
| ! | ACGAGTCATGAAATTTTCAC+TGG | - | chr8.3:48895609-48895628 | None:intergenic | 35.0% |
| ! | ATGACAACAAGTTTGCTTGT+TGG | + | chr8.3:48896487-48896506 | MS.gene32277:CDS | 35.0% |
| ! | CAATTTGAAGGGTTGATTGA+TGG | + | chr8.3:48897966-48897985 | MS.gene32277:CDS | 35.0% |
| ! | CCTTTTTCTTATGGGATCAT+TGG | + | chr8.3:48896996-48897015 | MS.gene32277:CDS | 35.0% |
| ! | GTGAGTATTTGTGCTTTGAA+AGG | + | chr8.3:48896463-48896482 | MS.gene32277:CDS | 35.0% |
| ! | GTTTTTCCTGTTTGGAAAGA+TGG | - | chr8.3:48895491-48895510 | None:intergenic | 35.0% |
| ! | TAGTTTAGCCCTATTTGTTG+TGG | + | chr8.3:48897160-48897179 | MS.gene32277:intron | 35.0% |
| ! | TGACAACAAGTTTGCTTGTT+GGG | + | chr8.3:48896488-48896507 | MS.gene32277:CDS | 35.0% |
| ! | TTCGATAGGTTTTTCCTGTT+TGG | - | chr8.3:48895499-48895518 | None:intergenic | 35.0% |
| ! | TTCTTTCCTTACGGTGTTAA+AGG | + | chr8.3:48896187-48896206 | MS.gene32277:CDS | 35.0% |
| !! | CTATGGAATTCTGGTTTGTT+TGG | + | chr8.3:48896835-48896854 | MS.gene32277:CDS | 35.0% |
| !!! | CATGAAATTTTCACTGGCTT+TGG | - | chr8.3:48895603-48895622 | None:intergenic | 35.0% |
| !!! | GTCTTATACCGGTTTTGATA+TGG | + | chr8.3:48896240-48896259 | MS.gene32277:CDS | 35.0% |
| AACAAAACCACAACGGCTAA+TGG | - | chr8.3:48896028-48896047 | None:intergenic | 40.0% | |
| AACCATGATGAGAGAATGGA+AGG | + | chr8.3:48897132-48897151 | MS.gene32277:CDS | 40.0% | |
| ATTCTCCTTGAAGCTCTTGT+TGG | + | chr8.3:48895887-48895906 | MS.gene32277:CDS | 40.0% | |
| ATTGAAACGAGCTTCTTGAC+CGG | - | chr8.3:48895702-48895721 | None:intergenic | 40.0% | |
| CAACGGATAAGAGCGATTTA+TGG | + | chr8.3:48896758-48896777 | MS.gene32277:CDS | 40.0% | |
| CACTAAAGATTTGTGAGGGT+GGG | + | chr8.3:48897820-48897839 | MS.gene32277:intron | 40.0% | |
| GAATTCAGCGTAGATGAAAG+CGG | - | chr8.3:48895780-48895799 | None:intergenic | 40.0% | |
| GCAACTTATGATGTGGATCA+TGG | + | chr8.3:48897093-48897112 | MS.gene32277:CDS | 40.0% | |
| GCACTTATTCATCCCAAAAC+TGG | + | chr8.3:48896574-48896593 | MS.gene32277:CDS | 40.0% | |
| GGATAAGAGCGATTTATGGA+AGG | + | chr8.3:48896762-48896781 | MS.gene32277:CDS | 40.0% | |
| GTTAATCACTAACGGAATCG+CGG | + | chr8.3:48896045-48896064 | MS.gene32277:CDS | 40.0% | |
| GTTCATGAGAGTCTGTTGAT+CGG | - | chr8.3:48895568-48895587 | None:intergenic | 40.0% | |
| TATGGGATCATTGGGTTATG+AGG | + | chr8.3:48897005-48897024 | MS.gene32277:CDS | 40.0% | |
| TCACTAAAGATTTGTGAGGG+TGG | + | chr8.3:48897819-48897838 | MS.gene32277:intron | 40.0% | |
| TCATTCCTGAGAATCGAACT+CGG | + | chr8.3:48895833-48895852 | MS.gene32277:CDS | 40.0% | |
| TGGATCGAGCATATTGAAAC+CGG | - | chr8.3:48896008-48896027 | None:intergenic | 40.0% | |
| TGTGAGGAGATATTATGGGA+GGG | + | chr8.3:48896732-48896751 | MS.gene32277:CDS | 40.0% | |
| TTGTGAGGAGATATTATGGG+AGG | + | chr8.3:48896731-48896750 | MS.gene32277:CDS | 40.0% | |
| TTTCTTGCTTTCATTGCTGC+TGG | + | chr8.3:48895860-48895879 | MS.gene32277:CDS | 40.0% | |
| ! | AAGTTTGCTTGTTGGGTCAA+TGG | + | chr8.3:48896495-48896514 | MS.gene32277:CDS | 40.0% |
| ! | AGTTTGCTTGTTGGGTCAAT+GGG | + | chr8.3:48896496-48896515 | MS.gene32277:CDS | 40.0% |
| ! | GAAGTGGTGCCAAGTTATAA+CGG | + | chr8.3:48897751-48897770 | MS.gene32277:intron | 40.0% |
| ! | GCGACGAACCTTTTTCTTAT+GGG | + | chr8.3:48896988-48897007 | MS.gene32277:CDS | 40.0% |
| ! | GGTTGATTGATGGCAAGAAA+CGG | + | chr8.3:48897976-48897995 | MS.gene32277:CDS | 40.0% |
| ! | TGCGACGAACCTTTTTCTTA+TGG | + | chr8.3:48896987-48897006 | MS.gene32277:CDS | 40.0% |
| ! | TTCGAGTGTCCATCATTTTC+AGG | + | chr8.3:48897870-48897889 | MS.gene32277:intron | 40.0% |
| !! | GCATATGAGAGGATAATGGA+AGG | - | chr8.3:48895731-48895750 | None:intergenic | 40.0% |
| !! | GGAATTCTGGTTTGTTTGGT+TGG | + | chr8.3:48896839-48896858 | MS.gene32277:CDS | 40.0% |
| !! | GTCGTGTATTGGTCTTATAC+CGG | + | chr8.3:48896229-48896248 | MS.gene32277:CDS | 40.0% |
| !! | TCTGGTTTGTTTGGTTGGAT+TGG | + | chr8.3:48896844-48896863 | MS.gene32277:CDS | 40.0% |
| !! | TTGTTGGTTCTTGTGTTGCT+GGG | + | chr8.3:48896806-48896825 | MS.gene32277:CDS | 40.0% |
| !!! | AATTTTCACTGGCTTTGGGA+AGG | - | chr8.3:48895598-48895617 | None:intergenic | 40.0% |
| !!! | GTCCATCATTTTCAGGTGTT+TGG | + | chr8.3:48897877-48897896 | MS.gene32277:intron | 40.0% |
| !!! | TGTTTGGTTTTTGGCGACTT+TGG | + | chr8.3:48896885-48896904 | MS.gene32277:CDS | 40.0% |
| AAACCAAACACAAGCAGCCA+CGG | - | chr8.3:48896875-48896894 | None:intergenic | 45.0% | |
| AAAGATTTGTGAGGGTGGGA+GGG | + | chr8.3:48897824-48897843 | MS.gene32277:intron | 45.0% | |
| AAGAGGCAACCAAAGGTTTG+GGG | + | chr8.3:48896928-48896947 | MS.gene32277:CDS | 45.0% | |
| AATCACCGAGTTCGATTCTC+AGG | - | chr8.3:48895841-48895860 | None:intergenic | 45.0% | |
| ACCTTTGGTTGCCTCTTCTT+CGG | - | chr8.3:48896925-48896944 | None:intergenic | 45.0% | |
| AGAACAACACTATGGAGCGA+TGG | + | chr8.3:48897216-48897235 | MS.gene32277:intron | 45.0% | |
| AGAAGAGGCAACCAAAGGTT+TGG | + | chr8.3:48896926-48896945 | MS.gene32277:CDS | 45.0% | |
| CAAGAAGCTCGTTTCAATGC+TGG | + | chr8.3:48895704-48895723 | MS.gene32277:CDS | 45.0% | |
| CACCTTCCATTCTCTCATCA+TGG | - | chr8.3:48897137-48897156 | None:intergenic | 45.0% | |
| CCAGAACCATCTTTCCAAAC+AGG | + | chr8.3:48895482-48895501 | MS.gene32277:CDS | 45.0% | |
| CCTGTTTGGAAAGATGGTTC+TGG | - | chr8.3:48895485-48895504 | None:intergenic | 45.0% | |
| CGCTGCATATGAGAGGATAA+TGG | - | chr8.3:48895735-48895754 | None:intergenic | 45.0% | |
| CTTCAAAACCACGAAGCTAC+TGG | + | chr8.3:48895435-48895454 | MS.gene32277:CDS | 45.0% | |
| GAAGAGGCAACCAAAGGTTT+GGG | + | chr8.3:48896927-48896946 | MS.gene32277:CDS | 45.0% | |
| GATGAAAGCGGAAAGAAGAG+CGG | - | chr8.3:48895768-48895787 | None:intergenic | 45.0% | |
| TAAAGATTTGTGAGGGTGGG+AGG | + | chr8.3:48897823-48897842 | MS.gene32277:intron | 45.0% | |
| TTCGTCGCAATCGACAATGA+TGG | - | chr8.3:48896976-48896995 | None:intergenic | 45.0% | |
| ! | ACGGAAGCAATGTTGCTTGT+CGG | + | chr8.3:48897770-48897789 | MS.gene32277:intron | 45.0% |
| ! | TAGTGGTTGTGCGGGAATTT+TGG | + | chr8.3:48897712-48897731 | MS.gene32277:intron | 45.0% |
| ! | TGAGTTTGCTTCCGAAGAAG+AGG | + | chr8.3:48896911-48896930 | MS.gene32277:CDS | 45.0% |
| !! | GGCATTGGCACTTGTGAATA+TGG | + | chr8.3:48896360-48896379 | MS.gene32277:CDS | 45.0% |
| !! | GTTGTTGGTTCTTGTGTTGC+TGG | + | chr8.3:48896805-48896824 | MS.gene32277:CDS | 45.0% |
| !! | TGGCTATTGCGTTGATTGTG+AGG | + | chr8.3:48896716-48896735 | MS.gene32277:CDS | 45.0% |
| !! | TGGTTGGATTGGTTATACCG+TGG | + | chr8.3:48896855-48896874 | MS.gene32277:CDS | 45.0% |
| !!! | GGCTGCTTGTGTTTGGTTTT+TGG | + | chr8.3:48896876-48896895 | MS.gene32277:CDS | 45.0% |
| AACCTGACGCTGCATATGAG+AGG | - | chr8.3:48895742-48895761 | None:intergenic | 50.0% | |
| ACCGGCAACAGGAACTTCAA+CGG | - | chr8.3:48895804-48895823 | None:intergenic | 50.0% | |
| AGAGGCAACCAAAGGTTTGG+GGG | + | chr8.3:48896929-48896948 | MS.gene32277:CDS | 50.0% | |
| AGGTTAAGTCCCACCAAGTG+AGG | - | chr8.3:48895634-48895653 | None:intergenic | 50.0% | |
| ATACCGTGGCTGCTTGTGTT+TGG | + | chr8.3:48896869-48896888 | MS.gene32277:CDS | 50.0% | |
| ATCCTCTCATATGCAGCGTC+AGG | + | chr8.3:48895737-48895756 | MS.gene32277:CDS | 50.0% | |
| ATCGACAATGATGGCACCCA+TGG | - | chr8.3:48896967-48896986 | None:intergenic | 50.0% | |
| ATGCTGCAGCTGTCGTGTAT+TGG | + | chr8.3:48896218-48896237 | MS.gene32277:CDS | 50.0% | |
| CACGAAGATGGTTGCAGAAG+TGG | + | chr8.3:48897735-48897754 | MS.gene32277:intron | 50.0% | |
| CAGCACCAACAAGAGCTTCA+AGG | - | chr8.3:48895895-48895914 | None:intergenic | 50.0% | |
| CAGGAATGAAAACGAGCCAC+CGG | - | chr8.3:48895822-48895841 | None:intergenic | 50.0% | |
| CTGTTGATCGGTTGAGGAGA+CGG | - | chr8.3:48895556-48895575 | None:intergenic | 50.0% | |
| GAGAGTCTGTTGATCGGTTG+AGG | - | chr8.3:48895562-48895581 | None:intergenic | 50.0% | |
| TCATGACTCGTTGCCTCACT+TGG | + | chr8.3:48895618-48895637 | MS.gene32277:CDS | 50.0% | |
| TCCGAAGAAGAGGCAACCAA+AGG | + | chr8.3:48896921-48896940 | MS.gene32277:CDS | 50.0% | |
| TTGGGTCAATGGGACAAGCT+AGG | + | chr8.3:48896506-48896525 | MS.gene32277:CDS | 50.0% | |
| ! | AGGAGACGGTCTTTTAAGCG+TGG | - | chr8.3:48895542-48895561 | None:intergenic | 50.0% |
| ! | GAAGCAATGTTGCTTGTCGG+TGG | + | chr8.3:48897773-48897792 | MS.gene32277:intron | 50.0% |
| ! | GACTTAACCTGGCTCGCTTT+CGG | + | chr8.3:48895644-48895663 | MS.gene32277:CDS | 50.0% |
| ! | GGAGACGGTCTTTTAAGCGT+GGG | - | chr8.3:48895541-48895560 | None:intergenic | 50.0% |
| ! | GTTTGCTAAGGCGGTTCGAT+AGG | - | chr8.3:48895513-48895532 | None:intergenic | 50.0% |
| ! | TCACTTGGTGGGACTTAACC+TGG | + | chr8.3:48895633-48895652 | MS.gene32277:CDS | 50.0% |
| !! | CGGGAATTTTGGCACGAAGA+TGG | + | chr8.3:48897723-48897742 | MS.gene32277:intron | 50.0% |
| !!! | GCTTCGTGGTTTTGAAGCTG+CGG | - | chr8.3:48895432-48895451 | None:intergenic | 50.0% |
| AAAGGTTTGGGGGGTTCCGT+TGG | + | chr8.3:48896939-48896958 | MS.gene32277:CDS | 55.0% | |
| AACCACGAAGCTACTGGCGA+TGG | + | chr8.3:48895441-48895460 | MS.gene32277:CDS | 55.0% | |
| AACGGAACCCCCCAAACCTT+TGG | - | chr8.3:48896940-48896959 | None:intergenic | 55.0% | |
| ACCGGTGACGACGAAGATAC+CGG | - | chr8.3:48895684-48895703 | None:intergenic | 55.0% | |
| ACTAACGGAATCGCGGCTAG+TGG | + | chr8.3:48896052-48896071 | MS.gene32277:CDS | 55.0% | |
| GACTCGTTGCCTCACTTGGT+GGG | + | chr8.3:48895622-48895641 | MS.gene32277:CDS | 55.0% | |
| GAGGAGGAGGAGGATGATGT+CGG | - | chr8.3:48895395-48895414 | None:intergenic | 55.0% | |
| GAGGCAACCAAAGGTTTGGG+GGG | + | chr8.3:48896930-48896949 | MS.gene32277:CDS | 55.0% | |
| GATGGCACCCATGGAACCAA+CGG | - | chr8.3:48896958-48896977 | None:intergenic | 55.0% | |
| GCCGTTGAAGTTCCTGTTGC+CGG | + | chr8.3:48895800-48895819 | MS.gene32277:CDS | 55.0% | |
| GCTCGATCCATTAGCCGTTG+TGG | + | chr8.3:48896018-48896037 | MS.gene32277:CDS | 55.0% | |
| GGGACTGCGCTATGGAATTC+TGG | + | chr8.3:48896826-48896845 | MS.gene32277:CDS | 55.0% | |
| GTTGAAGTTCCTGTTGCCGG+TGG | + | chr8.3:48895803-48895822 | MS.gene32277:CDS | 55.0% | |
| TCCGGTATCTTCGTCGTCAC+CGG | + | chr8.3:48895680-48895699 | MS.gene32277:CDS | 55.0% | |
| TGACCATGAACGACCGAGAC+CGG | - | chr8.3:48895918-48895937 | None:intergenic | 55.0% | |
| TGACTCGTTGCCTCACTTGG+TGG | + | chr8.3:48895621-48895640 | MS.gene32277:CDS | 55.0% | |
| TGAGGGTGGGAGGGAAGAAT+CGG | + | chr8.3:48897833-48897852 | MS.gene32277:intron | 55.0% | |
| ! | ACGGTCTTTTAAGCGTGGGC+AGG | - | chr8.3:48895537-48895556 | None:intergenic | 55.0% |
| ! | TGGGCAGGTGTTTGCTAAGG+CGG | - | chr8.3:48895522-48895541 | None:intergenic | 55.0% |
| !! | GAAGCTCTTGTTGGTGCTGC+CGG | + | chr8.3:48895896-48895915 | MS.gene32277:CDS | 55.0% |
| !!! | TCGTGGTTTTGAAGCTGCGG+CGG | - | chr8.3:48895429-48895448 | None:intergenic | 55.0% |
| CTCCATCGCCAGTAGCTTCG+TGG | - | chr8.3:48895446-48895465 | None:intergenic | 60.0% | |
| GAAAACGAGCCACCGGCAAC+AGG | - | chr8.3:48895815-48895834 | None:intergenic | 60.0% | |
| GAGGAGGAGGATGATGTCGG+TGG | - | chr8.3:48895392-48895411 | None:intergenic | 60.0% | |
| ! | GCGTGGGCAGGTGTTTGCTA+AGG | - | chr8.3:48895525-48895544 | None:intergenic | 60.0% |
| ! | GTGTTGCTGGGACTGCGCTA+TGG | + | chr8.3:48896818-48896837 | MS.gene32277:CDS | 60.0% |
| !! | CTTGTTGGTGCTGCCGGTCT+CGG | + | chr8.3:48895902-48895921 | MS.gene32277:CDS | 60.0% |
| !! | GGGGGTTCCGTTGGTTCCAT+GGG | + | chr8.3:48896948-48896967 | MS.gene32277:CDS | 60.0% |
| !! | TTCGGCGCTGTCGTTGGTTC+CGG | + | chr8.3:48895662-48895681 | MS.gene32277:CDS | 60.0% |
| !!! | TGGTTTTGAAGCTGCGGCGG+TGG | - | chr8.3:48895426-48895445 | None:intergenic | 60.0% |
| !!! | TTTTGAAGCTGCGGCGGTGG+TGG | - | chr8.3:48895423-48895442 | None:intergenic | 60.0% |
| CTCGCTTTCGGCGCTGTCGT+TGG | + | chr8.3:48895656-48895675 | MS.gene32277:CDS | 65.0% | |
| CTGCCGGTCTCGGTCGTTCA+TGG | + | chr8.3:48895912-48895931 | MS.gene32277:CDS | 65.0% | |
| !! | GGGGGGTTCCGTTGGTTCCA+TGG | + | chr8.3:48896947-48896966 | MS.gene32277:CDS | 65.0% |
| GGTGGTCGTGGAGGAGGAGG+AGG | - | chr8.3:48895405-48895424 | None:intergenic | 70.0% | |
| ! | GACAGCGCCGAAAGCGAGCC+AGG | - | chr8.3:48895654-48895673 | None:intergenic | 70.0% |
| ! | GGTGGTGGTCGTGGAGGAGG+AGG | - | chr8.3:48895408-48895427 | None:intergenic | 70.0% |
| ! | AGCTGCGGCGGTGGTGGTCG+TGG | - | chr8.3:48895417-48895436 | None:intergenic | 75.0% |
| ! | GGCGGTGGTGGTCGTGGAGG+AGG | - | chr8.3:48895411-48895430 | None:intergenic | 75.0% |
| ! | TGCGGCGGTGGTGGTCGTGG+AGG | - | chr8.3:48895414-48895433 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 48895383 | 48898016 | 48895383 | ID=MS.gene32277 |
| chr8.3 | mRNA | 48895383 | 48898016 | 48895383 | ID=MS.gene32277.t1;Parent=MS.gene32277 |
| chr8.3 | exon | 48895383 | 48897153 | 48895383 | ID=MS.gene32277.t1.exon1;Parent=MS.gene32277.t1 |
| chr8.3 | CDS | 48895383 | 48897153 | 48895383 | ID=cds.MS.gene32277.t1;Parent=MS.gene32277.t1 |
| chr8.3 | exon | 48897892 | 48898016 | 48897892 | ID=MS.gene32277.t1.exon2;Parent=MS.gene32277.t1 |
| chr8.3 | CDS | 48897892 | 48898016 | 48897892 | ID=cds.MS.gene32277.t1;Parent=MS.gene32277.t1 |
| Gene Sequence |
| Protein sequence |
