Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38964.t1 | RHN40813.1 | 96.2 | 574 | 20 | 1 | 19 | 592 | 18 | 589 | 0.00E+00 | 1075.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38964.t1 | Q9SHH0 | 71.9 | 559 | 157 | 0 | 19 | 577 | 20 | 578 | 2.4e-232 | 806.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38964.t1 | A0A396GJV2 | 96.2 | 574 | 20 | 1 | 19 | 592 | 18 | 589 | 0.0e+00 | 1075.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene030903 | MS.gene38964 | PPI |
| MS.gene38964 | MS.gene030906 | PPI |
| MS.gene38964 | MS.gene064542 | PPI |
| MS.gene38964 | MS.gene037356 | PPI |
| MS.gene38964 | MS.gene029217 | PPI |
| MS.gene38964 | MS.gene53498 | PPI |
| MS.gene38964 | MS.gene53499 | PPI |
| MS.gene38964 | MS.gene27968 | PPI |
| MS.gene47928 | MS.gene38964 | PPI |
| MS.gene38964 | MS.gene029219 | PPI |
| MS.gene38964 | MS.gene90825 | PPI |
| MS.gene53497 | MS.gene38964 | PPI |
| MS.gene38964 | MS.gene47930 | PPI |
| MS.gene38964 | MS.gene73119 | PPI |
| MS.gene38964 | MS.gene27966 | PPI |
| MS.gene38964 | MS.gene97346 | PPI |
| MS.gene93135 | MS.gene38964 | PPI |
| MS.gene38964 | MS.gene029093 | PPI |
| MS.gene035805 | MS.gene38964 | PPI |
| MS.gene23912 | MS.gene38964 | PPI |
| MS.gene38964 | MS.gene53496 | PPI |
| MS.gene47931 | MS.gene38964 | PPI |
| MS.gene030905 | MS.gene38964 | PPI |
| MS.gene27969 | MS.gene38964 | PPI |
| MS.gene38964 | MS.gene27967 | PPI |
| MS.gene38964 | MS.gene066439 | PPI |
| MS.gene030907 | MS.gene38964 | PPI |
| MS.gene38964 | MS.gene47929 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38964.t1 | MTR_8g461380 | 95.608 | 592 | 23 | 2 | 1 | 592 | 1 | 589 | 0.0 | 1145 |
| MS.gene38964.t1 | MTR_2g035430 | 61.313 | 579 | 213 | 4 | 22 | 591 | 14 | 590 | 0.0 | 719 |
| MS.gene38964.t1 | MTR_8g089320 | 50.000 | 568 | 280 | 2 | 27 | 590 | 19 | 586 | 0.0 | 580 |
| MS.gene38964.t1 | MTR_8g089360 | 50.089 | 559 | 275 | 3 | 28 | 585 | 25 | 580 | 0.0 | 559 |
| MS.gene38964.t1 | MTR_8g089360 | 50.089 | 559 | 275 | 3 | 28 | 585 | 8 | 563 | 0.0 | 559 |
| MS.gene38964.t1 | MTR_1g030660 | 48.122 | 559 | 285 | 3 | 37 | 594 | 24 | 578 | 0.0 | 549 |
| MS.gene38964.t1 | MTR_6g034535 | 85.830 | 247 | 31 | 1 | 352 | 594 | 68 | 314 | 6.73e-149 | 432 |
| MS.gene38964.t1 | MTR_6g034535 | 67.708 | 96 | 6 | 1 | 106 | 201 | 19 | 89 | 9.92e-29 | 117 |
| MS.gene38964.t1 | MTR_8g089340 | 48.131 | 428 | 220 | 2 | 157 | 582 | 1 | 428 | 3.78e-133 | 397 |
| MS.gene38964.t1 | MTR_1g111740 | 39.649 | 570 | 314 | 7 | 37 | 585 | 7 | 567 | 2.50e-131 | 397 |
| MS.gene38964.t1 | MTR_4g099270 | 38.314 | 522 | 313 | 5 | 64 | 577 | 6 | 526 | 2.25e-105 | 328 |
| MS.gene38964.t1 | MTR_4g099270 | 41.270 | 378 | 218 | 2 | 40 | 413 | 3 | 380 | 6.79e-89 | 281 |
| MS.gene38964.t1 | MTR_4g099270 | 36.145 | 415 | 256 | 5 | 171 | 577 | 1 | 414 | 3.90e-76 | 249 |
| MS.gene38964.t1 | MTR_4g099270 | 40.461 | 304 | 177 | 2 | 40 | 339 | 3 | 306 | 3.49e-65 | 216 |
| MS.gene38964.t1 | MTR_7g007850 | 31.801 | 522 | 317 | 10 | 76 | 577 | 45 | 547 | 2.65e-63 | 218 |
| MS.gene38964.t1 | MTR_6g027680 | 31.204 | 407 | 265 | 3 | 63 | 454 | 21 | 427 | 4.59e-61 | 213 |
| MS.gene38964.t1 | MTR_7g007850 | 30.515 | 544 | 325 | 11 | 76 | 577 | 45 | 577 | 5.47e-61 | 213 |
| MS.gene38964.t1 | MTR_6g027630 | 31.450 | 407 | 269 | 5 | 58 | 454 | 18 | 424 | 3.02e-60 | 210 |
| MS.gene38964.t1 | MTR_6g027630 | 31.450 | 407 | 269 | 5 | 58 | 454 | 18 | 424 | 6.19e-60 | 211 |
| MS.gene38964.t1 | MTR_6g027660 | 30.788 | 406 | 266 | 3 | 56 | 454 | 28 | 425 | 5.31e-59 | 208 |
| MS.gene38964.t1 | MTR_7g086510 | 31.332 | 383 | 256 | 3 | 79 | 454 | 37 | 419 | 9.72e-59 | 207 |
| MS.gene38964.t1 | MTR_6g027650 | 29.484 | 407 | 271 | 4 | 55 | 454 | 20 | 417 | 3.97e-58 | 206 |
| MS.gene38964.t1 | MTR_7g086610 | 31.152 | 382 | 256 | 2 | 80 | 454 | 32 | 413 | 2.25e-56 | 201 |
| MS.gene38964.t1 | MTR_7g007850 | 31.840 | 424 | 272 | 6 | 76 | 487 | 45 | 463 | 4.86e-56 | 198 |
| MS.gene38964.t1 | MTR_7g007850 | 31.840 | 424 | 272 | 6 | 76 | 487 | 45 | 463 | 4.89e-56 | 197 |
| MS.gene38964.t1 | MTR_6g027630 | 31.157 | 337 | 225 | 3 | 125 | 454 | 3 | 339 | 2.41e-48 | 177 |
| MS.gene38964.t1 | MTR_8g089342 | 56.410 | 117 | 51 | 0 | 30 | 146 | 23 | 139 | 1.15e-38 | 139 |
| MS.gene38964.t1 | MTR_6g027670 | 32.911 | 158 | 106 | 0 | 297 | 454 | 1 | 158 | 4.54e-25 | 106 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38964.t1 | AT1G17120 | 70.928 | 571 | 165 | 1 | 19 | 588 | 20 | 590 | 0.0 | 820 |
| MS.gene38964.t1 | AT2G34960 | 61.964 | 560 | 210 | 3 | 20 | 577 | 4 | 562 | 0.0 | 723 |
| MS.gene38964.t1 | AT4G21120 | 51.064 | 564 | 275 | 1 | 28 | 590 | 18 | 581 | 0.0 | 590 |
| MS.gene38964.t1 | AT4G21120 | 49.420 | 431 | 217 | 1 | 161 | 590 | 1 | 431 | 1.05e-146 | 431 |
| MS.gene38964.t1 | AT5G04770 | 40.868 | 553 | 310 | 5 | 38 | 576 | 15 | 564 | 2.31e-129 | 392 |
| MS.gene38964.t1 | AT3G10600 | 39.547 | 574 | 322 | 8 | 35 | 590 | 11 | 577 | 4.26e-128 | 388 |
| MS.gene38964.t1 | AT5G04770 | 43.750 | 384 | 206 | 2 | 38 | 411 | 15 | 398 | 1.93e-98 | 306 |
| MS.gene38964.t1 | AT3G10600 | 37.900 | 438 | 247 | 8 | 171 | 590 | 1 | 431 | 1.96e-88 | 281 |
| MS.gene38964.t1 | AT5G04770 | 38.810 | 420 | 240 | 5 | 171 | 576 | 1 | 417 | 8.87e-84 | 269 |
| MS.gene38964.t1 | AT1G05940 | 31.157 | 536 | 333 | 11 | 76 | 586 | 44 | 568 | 1.25e-60 | 211 |
| MS.gene38964.t1 | AT5G36940 | 29.484 | 407 | 280 | 3 | 55 | 454 | 4 | 410 | 1.13e-59 | 209 |
| MS.gene38964.t1 | AT1G58030 | 29.639 | 388 | 266 | 3 | 74 | 454 | 34 | 421 | 1.84e-57 | 204 |
| MS.gene38964.t1 | AT1G05940 | 32.048 | 415 | 269 | 4 | 76 | 478 | 44 | 457 | 3.24e-56 | 197 |
| MS.gene38964.t1 | AT1G05940 | 32.048 | 415 | 269 | 4 | 76 | 478 | 44 | 457 | 4.63e-56 | 198 |
| MS.gene38964.t1 | AT3G03720 | 28.288 | 403 | 280 | 4 | 60 | 454 | 4 | 405 | 4.35e-53 | 191 |
| MS.gene38964.t1 | AT1G05940 | 29.890 | 455 | 282 | 10 | 156 | 586 | 9 | 450 | 3.10e-43 | 161 |
Find 132 sgRNAs with CRISPR-Local
Find 170 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATATACCTATTGGTTTAAT+TGG | 0.145764 | 8.4:+49260099 | MS.gene38964:CDS |
| TTCTTTCCTTACGGTGTTAA+AGG | 0.232045 | 8.4:+49259985 | MS.gene38964:CDS |
| ATTAATAGGTGTTCCAGTTT+TGG | 0.242325 | 8.4:-49260385 | None:intergenic |
| TTGATTGTGAGGAGATATTA+TGG | 0.270784 | 8.4:+49260525 | MS.gene38964:CDS |
| GGCATTGGCACTTGTGAATA+TGG | 0.273952 | 8.4:+49260158 | MS.gene38964:CDS |
| GGGACTGCGCTATGGAATTC+TGG | 0.274074 | 8.4:+49260624 | MS.gene38964:CDS |
| GTTGTTGGTTCTTGTGTTGC+TGG | 0.281893 | 8.4:+49260603 | MS.gene38964:CDS |
| GACTTAACCTGGCTTGCTTT+TGG | 0.287921 | 8.4:+49259442 | MS.gene38964:CDS |
| TTTCTTGCTTTCATTGCTGC+TGG | 0.302937 | 8.4:+49259658 | MS.gene38964:CDS |
| GGTGGGGATGGTTGTGGAGG+AGG | 0.309980 | 8.4:-49259203 | None:intergenic |
| TGCGGTGGTGGGGATGGTTG+TGG | 0.314718 | 8.4:-49259209 | None:intergenic |
| AACAAAACCACAACGGCTAA+TGG | 0.322847 | 8.4:-49259823 | None:intergenic |
| GGCTTTGAAGGTGCGGTGGT+GGG | 0.323895 | 8.4:-49259220 | None:intergenic |
| GCACTTATTCATCCCAAAAC+TGG | 0.324146 | 8.4:+49260372 | MS.gene38964:CDS |
| TTGTGTTTGTTTGTTGTTGT+TGG | 0.327089 | 8.4:+49260588 | MS.gene38964:CDS |
| TTGTTCAAATTGGTATGAAA+TGG | 0.328124 | 8.4:+49260226 | MS.gene38964:CDS |
| GGGGATGGTTGTGGAGGAGG+AGG | 0.328468 | 8.4:-49259200 | None:intergenic |
| AACGGTTATTTATTGTTTGA+TGG | 0.330270 | 8.4:+49260137 | MS.gene38964:CDS |
| TGACAACAAGTTTGCTTGTT+GGG | 0.330599 | 8.4:+49260286 | MS.gene38964:CDS |
| CAACGGATAAGAGCGATTTA+TGG | 0.330824 | 8.4:+49260556 | MS.gene38964:CDS |
| CCAATGATCCCATAAGAAAA+AGG | 0.332205 | 8.4:-49260794 | None:intergenic |
| CTGCCGGTCTCGGTCGTTCA+TGG | 0.340474 | 8.4:+49259710 | MS.gene38964:CDS |
| CTTGTTGGTGCTGCCGGTCT+CGG | 0.343843 | 8.4:+49259700 | MS.gene38964:CDS |
| TGTTCAAATTGGTATGAAAT+GGG | 0.344658 | 8.4:+49260227 | MS.gene38964:CDS |
| CCGGTTTGGAAAGATGGTTC+TGG | 0.347078 | 8.4:-49259280 | None:intergenic |
| TTTGGCGCTGTCGTCGGTTC+CGG | 0.359301 | 8.4:+49259460 | MS.gene38964:CDS |
| ATTCTCCTTGAAGCTCTTGT+TGG | 0.364163 | 8.4:+49259685 | MS.gene38964:CDS |
| TTTAGATTCTTGATTTGTAC+TGG | 0.365670 | 8.4:+49260831 | MS.gene38964:CDS |
| GATGGTTGTGGAGGAGGAGG+AGG | 0.366628 | 8.4:-49259197 | None:intergenic |
| CTATGGAATTCTGGTTTGTT+TGG | 0.375852 | 8.4:+49260633 | MS.gene38964:CDS |
| TGGCTTTGAAGGTGCGGTGG+TGG | 0.379853 | 8.4:-49259221 | None:intergenic |
| CCTTCAAGAGATATACCTAT+TGG | 0.381314 | 8.4:+49260090 | MS.gene38964:CDS |
| GTCAAAAGTGTAGCATTAAT+AGG | 0.382938 | 8.4:-49260399 | None:intergenic |
| GAAGAGGCAACCAAAGGTTT+GGG | 0.387706 | 8.4:+49260725 | MS.gene38964:CDS |
| ACCTTTGGTTGCCTCTTCTT+CGG | 0.388733 | 8.4:-49260720 | None:intergenic |
| TATGGGATCATTGGGTTATG+AGG | 0.391461 | 8.4:+49260803 | MS.gene38964:CDS |
| TCTGGTTTGTTTGGTTGGAT+TGG | 0.392722 | 8.4:+49260642 | MS.gene38964:CDS |
| CACCTTCCATTCTCTCATCA+TGG | 0.395056 | 8.4:-49260932 | None:intergenic |
| GGAATTCTGGTTTGTTTGGT+TGG | 0.396442 | 8.4:+49260637 | MS.gene38964:CDS |
| AAGTTTGCTTGTTGGGTCAA+TGG | 0.398278 | 8.4:+49260293 | MS.gene38964:CDS |
| AGAAGAGGCAACCAAAGGTT+TGG | 0.405906 | 8.4:+49260724 | MS.gene38964:CDS |
| GCCGTTGAAGTTCCCGTCGC+TGG | 0.406958 | 8.4:+49259598 | MS.gene38964:CDS |
| CAGTAGCTTCGTGGCTTTGA+AGG | 0.407913 | 8.4:-49259232 | None:intergenic |
| TCACTTGGTGGGACTTAACC+TGG | 0.412491 | 8.4:+49259431 | MS.gene38964:CDS |
| ACGCTGCAGCTGTCGTGTAT+TGG | 0.414985 | 8.4:+49260016 | MS.gene38964:CDS |
| TATTTATTGTTTGATGGCAT+TGG | 0.415152 | 8.4:+49260143 | MS.gene38964:CDS |
| CCATGACTCGTTGCCTCACT+TGG | 0.415187 | 8.4:+49259416 | MS.gene38964:CDS |
| TTGTTGGTTCTTGTGTTGCT+GGG | 0.417278 | 8.4:+49260604 | MS.gene38964:CDS |
| CTCCATCGCCAGTAGCTTCG+TGG | 0.417828 | 8.4:-49259241 | None:intergenic |
| AGTTTGCTTGTTGGGTCAAT+GGG | 0.420169 | 8.4:+49260294 | MS.gene38964:CDS |
| ATTGAACCAATTAAACCAAT+AGG | 0.426832 | 8.4:-49260105 | None:intergenic |
| CCAATAGGTATATCTCTTGA+AGG | 0.429939 | 8.4:-49260090 | None:intergenic |
| TTCTTGCTTTCATTGCTGCT+GGG | 0.430448 | 8.4:+49259659 | MS.gene38964:CDS |
| TTAACACCGTTCTTTCCTTA+CGG | 0.430663 | 8.4:+49259976 | MS.gene38964:CDS |
| CCAGAACCATCTTTCCAAAC+CGG | 0.431612 | 8.4:+49259280 | MS.gene38964:CDS |
| TGAAGGTGCGGTGGTGGGGA+TGG | 0.431688 | 8.4:-49259215 | None:intergenic |
| ATTCTCTCCTATGCAGCGTC+AGG | 0.432906 | 8.4:+49259535 | MS.gene38964:CDS |
| ATACCGTGGCTGCTTGTGTT+TGG | 0.437593 | 8.4:+49260667 | MS.gene38964:CDS |
| GGTGGTGGGGATGGTTGTGG+AGG | 0.440644 | 8.4:-49259206 | None:intergenic |
| CAACAAATAGGGCTAAACTA+TGG | 0.448577 | 8.4:-49260955 | None:intergenic |
| GCGTGGGCAGGTGTTTGATA+AGG | 0.456491 | 8.4:-49259320 | None:intergenic |
| TGATTGTGAGGAGATATTAT+GGG | 0.459724 | 8.4:+49260526 | MS.gene38964:CDS |
| GAAGCTCTTGTTGGTGCTGC+CGG | 0.460471 | 8.4:+49259694 | MS.gene38964:CDS |
| CACAATGATAAAGAACGATT+CGG | 0.464761 | 8.4:+49259747 | MS.gene38964:CDS |
| TGGTTCAATGTCTATGATAA+CGG | 0.465812 | 8.4:+49260119 | MS.gene38964:CDS |
| CGCTGCATAGGAGAGAATAA+TGG | 0.467239 | 8.4:-49259530 | None:intergenic |
| GCTTTGAAGGTGCGGTGGTG+GGG | 0.472654 | 8.4:-49259219 | None:intergenic |
| ATCAAACCATGATGAGAGAA+TGG | 0.480689 | 8.4:+49260926 | MS.gene38964:CDS |
| GAGAGTCTGTTGATCGGTTG+AGG | 0.481012 | 8.4:-49259357 | None:intergenic |
| GTCGTGTATTGGTCTTATAC+CGG | 0.481654 | 8.4:+49260027 | MS.gene38964:CDS |
| TCCGGTATCTTCGTCGTCAC+CGG | 0.482639 | 8.4:+49259478 | MS.gene38964:CDS |
| ACCGGTGACGACGAAGATAC+CGG | 0.483231 | 8.4:-49259479 | None:intergenic |
| GACTCGTTGCCTCACTTGGT+GGG | 0.485706 | 8.4:+49259420 | MS.gene38964:CDS |
| ATGACAACAAGTTTGCTTGT+TGG | 0.486739 | 8.4:+49260285 | MS.gene38964:CDS |
| TGACTCGTTGCCTCACTTGG+TGG | 0.488994 | 8.4:+49259419 | MS.gene38964:CDS |
| CCAAGTGAGGCAACGAGTCA+TGG | 0.489696 | 8.4:-49259416 | None:intergenic |
| GCAACTTATGATGTGGATCA+TGG | 0.490232 | 8.4:+49260891 | MS.gene38964:CDS |
| TATGATGTGGATCATGGAAT+TGG | 0.490780 | 8.4:+49260897 | MS.gene38964:CDS |
| CTTCAAAGCCACGAAGCTAC+TGG | 0.495668 | 8.4:+49259233 | MS.gene38964:CDS |
| AGTTGCAACCATATCAAAAC+CGG | 0.498318 | 8.4:-49260046 | None:intergenic |
| CGAATCGTTCTTTATCATTG+TGG | 0.500875 | 8.4:-49259746 | None:intergenic |
| CAAGAAGCTCGTTTCAATGC+TGG | 0.502149 | 8.4:+49259502 | MS.gene38964:CDS |
| GTGAGTATTTGTGCTTTGAA+AGG | 0.502564 | 8.4:+49260261 | MS.gene38964:CDS |
| CAGCACCAACAAGAGCTTCA+AGG | 0.507060 | 8.4:-49259690 | None:intergenic |
| AGAAAACGAGCCACCAGCGA+CGG | 0.513871 | 8.4:-49259611 | None:intergenic |
| GAAAACGAGCCACCAGCGAC+GGG | 0.517113 | 8.4:-49259610 | None:intergenic |
| CTGTTGATCGGTTGAGGAGA+CGG | 0.523901 | 8.4:-49259351 | None:intergenic |
| GTTTGATAAGGCGGTTCGAT+AGG | 0.523946 | 8.4:-49259308 | None:intergenic |
| AAAACACCTTTAACACCGTA+AGG | 0.526823 | 8.4:-49259991 | None:intergenic |
| GTTCAAATTGGTATGAAATG+GGG | 0.527507 | 8.4:+49260228 | MS.gene38964:CDS |
| GACAGCGCCAAAAGCAAGCC+AGG | 0.528955 | 8.4:-49259449 | None:intergenic |
| GCTTGATCCATTAGCCGTTG+TGG | 0.536314 | 8.4:+49259816 | MS.gene38964:CDS |
| AGAGAAACCTGACGCTGCAT+AGG | 0.539280 | 8.4:-49259542 | None:intergenic |
| TGACCATGAACGACCGAGAC+CGG | 0.540172 | 8.4:-49259713 | None:intergenic |
| GTGTTGCTGGGACTGCGCTA+TGG | 0.541923 | 8.4:+49260616 | MS.gene38964:CDS |
| ATCGACAATGATGGCACCCA+TGG | 0.546905 | 8.4:-49260762 | None:intergenic |
| ATTGAAACGAGCTTCTTGAC+CGG | 0.547155 | 8.4:-49259497 | None:intergenic |
| TGAGTTTGCTTCCGAAGAAG+AGG | 0.551130 | 8.4:+49260709 | MS.gene38964:CDS |
| GGAGGATGTCGGTGGTGTCA+TGG | 0.553029 | 8.4:-49259179 | None:intergenic |
| TTGGGTCAATGGGACAAGCT+AGG | 0.554068 | 8.4:+49260304 | MS.gene38964:CDS |
| ACTAACGGAATCGCGGCTAG+TGG | 0.559727 | 8.4:+49259850 | MS.gene38964:CDS |
| GTTGAAGTTCCCGTCGCTGG+TGG | 0.562608 | 8.4:+49259601 | MS.gene38964:CDS |
| TGTGAGGAGATATTATGGGA+GGG | 0.562883 | 8.4:+49260530 | MS.gene38964:CDS |
| AAGAGGCAACCAAAGGTTTG+GGG | 0.576079 | 8.4:+49260726 | MS.gene38964:CDS |
| AGCCACGAAGCTACTGGCGA+TGG | 0.577541 | 8.4:+49259239 | MS.gene38964:CDS |
| CAATAGGTATATCTCTTGAA+GGG | 0.579389 | 8.4:-49260089 | None:intergenic |
| TTGTGAGGAGATATTATGGG+AGG | 0.581589 | 8.4:+49260529 | MS.gene38964:CDS |
| AGAGGCAACCAAAGGTTTGG+GGG | 0.584028 | 8.4:+49260727 | MS.gene38964:CDS |
| GAGGAGGAGGAGGATGTCGG+TGG | 0.585848 | 8.4:-49259187 | None:intergenic |
| ACCAGCGACGGGAACTTCAA+CGG | 0.587595 | 8.4:-49259599 | None:intergenic |
| TCCGAAGAAGAGGCAACCAA+AGG | 0.591614 | 8.4:+49260719 | MS.gene38964:CDS |
| AACCATGATGAGAGAATGGA+AGG | 0.591931 | 8.4:+49260930 | MS.gene38964:CDS |
| GCTTCGTGGCTTTGAAGGTG+CGG | 0.594338 | 8.4:-49259227 | None:intergenic |
| AAGTATAGTGAGATTGATGC+TGG | 0.595966 | 8.4:+49260183 | MS.gene38964:CDS |
| ATATTATGGGAGGGAATCAA+CGG | 0.605663 | 8.4:+49260539 | MS.gene38964:CDS |
| TGGGCAGGTGTTTGATAAGG+CGG | 0.606796 | 8.4:-49259317 | None:intergenic |
| TGGCTATTGCGTTGATTGTG+AGG | 0.607141 | 8.4:+49260514 | MS.gene38964:CDS |
| TTCGTCGCAATCGACAATGA+TGG | 0.608279 | 8.4:-49260771 | None:intergenic |
| GGATAAGAGCGATTTATGGA+AGG | 0.608757 | 8.4:+49260560 | MS.gene38964:CDS |
| AAACCAAACACAAGCAGCCA+CGG | 0.609702 | 8.4:-49260670 | None:intergenic |
| AGGTTAAGTCCCACCAAGTG+AGG | 0.616937 | 8.4:-49259429 | None:intergenic |
| TCGTGGCTTTGAAGGTGCGG+TGG | 0.632893 | 8.4:-49259224 | None:intergenic |
| GTTAATCACTAACGGAATCG+CGG | 0.635124 | 8.4:+49259843 | MS.gene38964:CDS |
| GTTCATGAGAGTCTGTTGAT+CGG | 0.635369 | 8.4:-49259363 | None:intergenic |
| GGTACACTACTCAAATTGCA+AGG | 0.653655 | 8.4:+49260325 | MS.gene38964:CDS |
| TTAACACCGTAAGGAAAGAA+CGG | 0.656749 | 8.4:-49259982 | None:intergenic |
| GAGGCAACCAAAGGTTTGGG+GGG | 0.658204 | 8.4:+49260728 | MS.gene38964:CDS |
| TGTTCATGCAACTTATGATG+TGG | 0.672047 | 8.4:+49260884 | MS.gene38964:CDS |
| GCATAGGAGAGAATAATGGA+AGG | 0.678902 | 8.4:-49259526 | None:intergenic |
| GAAATACATCTATCTTAACA+TGG | 0.692843 | 8.4:+49259878 | MS.gene38964:CDS |
| TGGTTGGATTGGTTATACCG+TGG | 0.704461 | 8.4:+49260653 | MS.gene38964:CDS |
| AGTGATTAACAAAACCACAA+CGG | 0.729960 | 8.4:-49259830 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTGTTACAACTTTTATTAT+CGG | + | chr8.4:49259910-49259929 | MS.gene38964:CDS | 15.0% |
| !!! | CTTTTGTATTATTTATTTGT+GGG | + | chr8.4:49260861-49260880 | MS.gene38964:CDS | 15.0% |
| !!! | GCTTTTGTATTATTTATTTG+TGG | + | chr8.4:49260860-49260879 | MS.gene38964:CDS | 20.0% |
| !!! | TCTTTTCATTTTTATGCTTA+TGG | + | chr8.4:49260494-49260513 | MS.gene38964:CDS | 20.0% |
| ! | AACGGTTATTTATTGTTTGA+TGG | + | chr8.4:49260137-49260156 | MS.gene38964:CDS | 25.0% |
| ! | ATTGAACCAATTAAACCAAT+AGG | - | chr8.4:49260108-49260127 | None:intergenic | 25.0% |
| ! | GAAATACATCTATCTTAACA+TGG | + | chr8.4:49259878-49259897 | MS.gene38964:CDS | 25.0% |
| ! | TGTTCAAATTGGTATGAAAT+GGG | + | chr8.4:49260227-49260246 | MS.gene38964:CDS | 25.0% |
| ! | TTGTTCAAATTGGTATGAAA+TGG | + | chr8.4:49260226-49260245 | MS.gene38964:CDS | 25.0% |
| !! | TATTTATTGTTTGATGGCAT+TGG | + | chr8.4:49260143-49260162 | MS.gene38964:CDS | 25.0% |
| !!! | AGAATCGATTCTTTTAAAAC+AGG | + | chr8.4:49259784-49259803 | MS.gene38964:CDS | 25.0% |
| !!! | ATCGGTTTTATTATTGTGAT+CGG | + | chr8.4:49259928-49259947 | MS.gene38964:CDS | 25.0% |
| !!! | GATATACCTATTGGTTTAAT+TGG | + | chr8.4:49260099-49260118 | MS.gene38964:CDS | 25.0% |
| !!! | TCTTTTCTAAGAATTGAACT+CGG | + | chr8.4:49259631-49259650 | MS.gene38964:CDS | 25.0% |
| !!! | TTTAGATTCTTGATTTGTAC+TGG | + | chr8.4:49260831-49260850 | MS.gene38964:CDS | 25.0% |
| AGTGATTAACAAAACCACAA+CGG | - | chr8.4:49259833-49259852 | None:intergenic | 30.0% | |
| CAATAGGTATATCTCTTGAA+GGG | - | chr8.4:49260092-49260111 | None:intergenic | 30.0% | |
| CACAATGATAAAGAACGATT+CGG | + | chr8.4:49259747-49259766 | MS.gene38964:CDS | 30.0% | |
| GGATGAATAAGTGCAAAAAA+GGG | - | chr8.4:49260366-49260385 | None:intergenic | 30.0% | |
| GTTCAAATTGGTATGAAATG+GGG | + | chr8.4:49260228-49260247 | MS.gene38964:CDS | 30.0% | |
| TGATTGTGAGGAGATATTAT+GGG | + | chr8.4:49260526-49260545 | MS.gene38964:CDS | 30.0% | |
| TGGTTCAATGTCTATGATAA+CGG | + | chr8.4:49260119-49260138 | MS.gene38964:CDS | 30.0% | |
| TTGATTGTGAGGAGATATTA+TGG | + | chr8.4:49260525-49260544 | MS.gene38964:CDS | 30.0% | |
| ! | ATTAATAGGTGTTCCAGTTT+TGG | - | chr8.4:49260388-49260407 | None:intergenic | 30.0% |
| ! | CTTTTTCTTATGGGATCATT+GGG | + | chr8.4:49260795-49260814 | MS.gene38964:CDS | 30.0% |
| ! | GTCAAAAGTGTAGCATTAAT+AGG | - | chr8.4:49260402-49260421 | None:intergenic | 30.0% |
| ! | TGTTGCTCTTTTTACTAGTT+TGG | + | chr8.4:49260440-49260459 | MS.gene38964:CDS | 30.0% |
| ! | TTAATAGGTGTTCCAGTTTT+GGG | - | chr8.4:49260387-49260406 | None:intergenic | 30.0% |
| ! | TTTTGATATGGTTGCAACTA+TGG | + | chr8.4:49260050-49260069 | MS.gene38964:CDS | 30.0% |
| !! | AGAACGATTCGGATTATTTT+CGG | + | chr8.4:49259758-49259777 | MS.gene38964:CDS | 30.0% |
| !! | ATTGTGATCGGTTTTATACA+TGG | + | chr8.4:49259940-49259959 | MS.gene38964:CDS | 30.0% |
| !! | TTGTGTTTGTTTGTTGTTGT+TGG | + | chr8.4:49260588-49260607 | MS.gene38964:CDS | 30.0% |
| !!! | GTGGTTTTGTTAATCACTAA+CGG | + | chr8.4:49259835-49259854 | MS.gene38964:CDS | 30.0% |
| !!! | TCAGTTGCTTTTGTTCAAAT+TGG | + | chr8.4:49260216-49260235 | MS.gene38964:CDS | 30.0% |
| AAAACACCTTTAACACCGTA+AGG | - | chr8.4:49259994-49260013 | None:intergenic | 35.0% | |
| AAGTATAGTGAGATTGATGC+TGG | + | chr8.4:49260183-49260202 | MS.gene38964:CDS | 35.0% | |
| AGTTGCAACCATATCAAAAC+CGG | - | chr8.4:49260049-49260068 | None:intergenic | 35.0% | |
| ATATTATGGGAGGGAATCAA+CGG | + | chr8.4:49260539-49260558 | MS.gene38964:CDS | 35.0% | |
| ATCAAACCATGATGAGAGAA+TGG | + | chr8.4:49260926-49260945 | MS.gene38964:CDS | 35.0% | |
| CCAATAGGTATATCTCTTGA+AGG | - | chr8.4:49260093-49260112 | None:intergenic | 35.0% | |
| CCAATGATCCCATAAGAAAA+AGG | - | chr8.4:49260797-49260816 | None:intergenic | 35.0% | |
| CCTTCAAGAGATATACCTAT+TGG | + | chr8.4:49260090-49260109 | MS.gene38964:CDS | 35.0% | |
| CGAATCGTTCTTTATCATTG+TGG | - | chr8.4:49259749-49259768 | None:intergenic | 35.0% | |
| GGGATGAATAAGTGCAAAAA+AGG | - | chr8.4:49260367-49260386 | None:intergenic | 35.0% | |
| TATGATGTGGATCATGGAAT+TGG | + | chr8.4:49260897-49260916 | MS.gene38964:CDS | 35.0% | |
| TGAATAAGTGCAAAAAAGGG+TGG | - | chr8.4:49260363-49260382 | None:intergenic | 35.0% | |
| TGTTCATGCAACTTATGATG+TGG | + | chr8.4:49260884-49260903 | MS.gene38964:CDS | 35.0% | |
| TTAACACCGTAAGGAAAGAA+CGG | - | chr8.4:49259985-49260004 | None:intergenic | 35.0% | |
| TTAACACCGTTCTTTCCTTA+CGG | + | chr8.4:49259976-49259995 | MS.gene38964:CDS | 35.0% | |
| ! | ATGACAACAAGTTTGCTTGT+TGG | + | chr8.4:49260285-49260304 | MS.gene38964:CDS | 35.0% |
| ! | CCTTTTTCTTATGGGATCAT+TGG | + | chr8.4:49260794-49260813 | MS.gene38964:CDS | 35.0% |
| ! | GTGAGTATTTGTGCTTTGAA+AGG | + | chr8.4:49260261-49260280 | MS.gene38964:CDS | 35.0% |
| ! | TGACAACAAGTTTGCTTGTT+GGG | + | chr8.4:49260286-49260305 | MS.gene38964:CDS | 35.0% |
| ! | TTCTTTCCTTACGGTGTTAA+AGG | + | chr8.4:49259985-49260004 | MS.gene38964:CDS | 35.0% |
| !! | CTATGGAATTCTGGTTTGTT+TGG | + | chr8.4:49260633-49260652 | MS.gene38964:CDS | 35.0% |
| !!! | ATGGAATTTTCACTGGCTTT+GGG | - | chr8.4:49259400-49259419 | None:intergenic | 35.0% |
| !!! | GTCTTATACCGGTTTTGATA+TGG | + | chr8.4:49260038-49260057 | MS.gene38964:CDS | 35.0% |
| AACAAAACCACAACGGCTAA+TGG | - | chr8.4:49259826-49259845 | None:intergenic | 40.0% | |
| AACCATGATGAGAGAATGGA+AGG | + | chr8.4:49260930-49260949 | MS.gene38964:CDS | 40.0% | |
| ATTCTCCTTGAAGCTCTTGT+TGG | + | chr8.4:49259685-49259704 | MS.gene38964:CDS | 40.0% | |
| ATTGAAACGAGCTTCTTGAC+CGG | - | chr8.4:49259500-49259519 | None:intergenic | 40.0% | |
| CAACGGATAAGAGCGATTTA+TGG | + | chr8.4:49260556-49260575 | MS.gene38964:CDS | 40.0% | |
| GCAACTTATGATGTGGATCA+TGG | + | chr8.4:49260891-49260910 | MS.gene38964:CDS | 40.0% | |
| GCACTTATTCATCCCAAAAC+TGG | + | chr8.4:49260372-49260391 | MS.gene38964:CDS | 40.0% | |
| GGATAAGAGCGATTTATGGA+AGG | + | chr8.4:49260560-49260579 | MS.gene38964:CDS | 40.0% | |
| GGTACACTACTCAAATTGCA+AGG | + | chr8.4:49260325-49260344 | MS.gene38964:CDS | 40.0% | |
| GTTAATCACTAACGGAATCG+CGG | + | chr8.4:49259843-49259862 | MS.gene38964:CDS | 40.0% | |
| GTTCATGAGAGTCTGTTGAT+CGG | - | chr8.4:49259366-49259385 | None:intergenic | 40.0% | |
| TATGGGATCATTGGGTTATG+AGG | + | chr8.4:49260803-49260822 | MS.gene38964:CDS | 40.0% | |
| TGTGAGGAGATATTATGGGA+GGG | + | chr8.4:49260530-49260549 | MS.gene38964:CDS | 40.0% | |
| TTCTTGCTTTCATTGCTGCT+GGG | + | chr8.4:49259659-49259678 | MS.gene38964:CDS | 40.0% | |
| TTGTGAGGAGATATTATGGG+AGG | + | chr8.4:49260529-49260548 | MS.gene38964:CDS | 40.0% | |
| TTTCTTGCTTTCATTGCTGC+TGG | + | chr8.4:49259658-49259677 | MS.gene38964:CDS | 40.0% | |
| ! | AAGTTTGCTTGTTGGGTCAA+TGG | + | chr8.4:49260293-49260312 | MS.gene38964:CDS | 40.0% |
| ! | ACGAGTCATGGAATTTTCAC+TGG | - | chr8.4:49259407-49259426 | None:intergenic | 40.0% |
| ! | AGTTTGCTTGTTGGGTCAAT+GGG | + | chr8.4:49260294-49260313 | MS.gene38964:CDS | 40.0% |
| ! | GCATAGGAGAGAATAATGGA+AGG | - | chr8.4:49259529-49259548 | None:intergenic | 40.0% |
| ! | GCGACGAACCTTTTTCTTAT+GGG | + | chr8.4:49260786-49260805 | MS.gene38964:CDS | 40.0% |
| ! | TGCGACGAACCTTTTTCTTA+TGG | + | chr8.4:49260785-49260804 | MS.gene38964:CDS | 40.0% |
| ! | TTCGATAGGTTTTTCCGGTT+TGG | - | chr8.4:49259297-49259316 | None:intergenic | 40.0% |
| !! | GGAATTCTGGTTTGTTTGGT+TGG | + | chr8.4:49260637-49260656 | MS.gene38964:CDS | 40.0% |
| !! | GTCGTGTATTGGTCTTATAC+CGG | + | chr8.4:49260027-49260046 | MS.gene38964:CDS | 40.0% |
| !! | TCTGGTTTGTTTGGTTGGAT+TGG | + | chr8.4:49260642-49260661 | MS.gene38964:CDS | 40.0% |
| !! | TTGTTGGTTCTTGTGTTGCT+GGG | + | chr8.4:49260604-49260623 | MS.gene38964:CDS | 40.0% |
| !!! | AATTTTCACTGGCTTTGGGA+AGG | - | chr8.4:49259396-49259415 | None:intergenic | 40.0% |
| !!! | CATGGAATTTTCACTGGCTT+TGG | - | chr8.4:49259401-49259420 | None:intergenic | 40.0% |
| !!! | GTTTTTCCGGTTTGGAAAGA+TGG | - | chr8.4:49259289-49259308 | None:intergenic | 40.0% |
| !!! | TGTTTGGTTTTTGGCGACTT+TGG | + | chr8.4:49260683-49260702 | MS.gene38964:CDS | 40.0% |
| AAACCAAACACAAGCAGCCA+CGG | - | chr8.4:49260673-49260692 | None:intergenic | 45.0% | |
| AAGAGGCAACCAAAGGTTTG+GGG | + | chr8.4:49260726-49260745 | MS.gene38964:CDS | 45.0% | |
| ACCTTTGGTTGCCTCTTCTT+CGG | - | chr8.4:49260723-49260742 | None:intergenic | 45.0% | |
| AGAAGAGGCAACCAAAGGTT+TGG | + | chr8.4:49260724-49260743 | MS.gene38964:CDS | 45.0% | |
| CAAGAAGCTCGTTTCAATGC+TGG | + | chr8.4:49259502-49259521 | MS.gene38964:CDS | 45.0% | |
| CACCTTCCATTCTCTCATCA+TGG | - | chr8.4:49260935-49260954 | None:intergenic | 45.0% | |
| CCAGAACCATCTTTCCAAAC+CGG | + | chr8.4:49259280-49259299 | MS.gene38964:CDS | 45.0% | |
| CGCTGCATAGGAGAGAATAA+TGG | - | chr8.4:49259533-49259552 | None:intergenic | 45.0% | |
| GAAGAGGCAACCAAAGGTTT+GGG | + | chr8.4:49260725-49260744 | MS.gene38964:CDS | 45.0% | |
| GTTTGATAAGGCGGTTCGAT+AGG | - | chr8.4:49259311-49259330 | None:intergenic | 45.0% | |
| TTCGTCGCAATCGACAATGA+TGG | - | chr8.4:49260774-49260793 | None:intergenic | 45.0% | |
| ! | TGAGTTTGCTTCCGAAGAAG+AGG | + | chr8.4:49260709-49260728 | MS.gene38964:CDS | 45.0% |
| !! | GGCATTGGCACTTGTGAATA+TGG | + | chr8.4:49260158-49260177 | MS.gene38964:CDS | 45.0% |
| !! | GTTGTTGGTTCTTGTGTTGC+TGG | + | chr8.4:49260603-49260622 | MS.gene38964:CDS | 45.0% |
| !! | TGGCTATTGCGTTGATTGTG+AGG | + | chr8.4:49260514-49260533 | MS.gene38964:CDS | 45.0% |
| !! | TGGTTGGATTGGTTATACCG+TGG | + | chr8.4:49260653-49260672 | MS.gene38964:CDS | 45.0% |
| !!! | GACTTAACCTGGCTTGCTTT+TGG | + | chr8.4:49259442-49259461 | MS.gene38964:CDS | 45.0% |
| !!! | GGCTGCTTGTGTTTGGTTTT+TGG | + | chr8.4:49260674-49260693 | MS.gene38964:CDS | 45.0% |
| AAAGGTTTGGGGGGTTCAGT+TGG | + | chr8.4:49260737-49260756 | MS.gene38964:CDS | 50.0% | |
| AACTGAACCCCCCAAACCTT+TGG | - | chr8.4:49260738-49260757 | None:intergenic | 50.0% | |
| AGAGAAACCTGACGCTGCAT+AGG | - | chr8.4:49259545-49259564 | None:intergenic | 50.0% | |
| AGAGGCAACCAAAGGTTTGG+GGG | + | chr8.4:49260727-49260746 | MS.gene38964:CDS | 50.0% | |
| AGGTTAAGTCCCACCAAGTG+AGG | - | chr8.4:49259432-49259451 | None:intergenic | 50.0% | |
| ATACCGTGGCTGCTTGTGTT+TGG | + | chr8.4:49260667-49260686 | MS.gene38964:CDS | 50.0% | |
| ATCGACAATGATGGCACCCA+TGG | - | chr8.4:49260765-49260784 | None:intergenic | 50.0% | |
| ATTCTCTCCTATGCAGCGTC+AGG | + | chr8.4:49259535-49259554 | MS.gene38964:CDS | 50.0% | |
| CAGCACCAACAAGAGCTTCA+AGG | - | chr8.4:49259693-49259712 | None:intergenic | 50.0% | |
| CTGTTGATCGGTTGAGGAGA+CGG | - | chr8.4:49259354-49259373 | None:intergenic | 50.0% | |
| CTTCAAAGCCACGAAGCTAC+TGG | + | chr8.4:49259233-49259252 | MS.gene38964:CDS | 50.0% | |
| GAGAGTCTGTTGATCGGTTG+AGG | - | chr8.4:49259360-49259379 | None:intergenic | 50.0% | |
| GCTTGATCCATTAGCCGTTG+TGG | + | chr8.4:49259816-49259835 | MS.gene38964:CDS | 50.0% | |
| TCCGAAGAAGAGGCAACCAA+AGG | + | chr8.4:49260719-49260738 | MS.gene38964:CDS | 50.0% | |
| TGGGCAGGTGTTTGATAAGG+CGG | - | chr8.4:49259320-49259339 | None:intergenic | 50.0% | |
| TTGGGTCAATGGGACAAGCT+AGG | + | chr8.4:49260304-49260323 | MS.gene38964:CDS | 50.0% | |
| ! | AGGAGACGGTCTTTTAAGCG+TGG | - | chr8.4:49259340-49259359 | None:intergenic | 50.0% |
| ! | GGAGACGGTCTTTTAAGCGT+GGG | - | chr8.4:49259339-49259358 | None:intergenic | 50.0% |
| ! | GGCGGTTCGATAGGTTTTTC+CGG | - | chr8.4:49259302-49259321 | None:intergenic | 50.0% |
| ! | TCACTTGGTGGGACTTAACC+TGG | + | chr8.4:49259431-49259450 | MS.gene38964:CDS | 50.0% |
| !! | CAGTAGCTTCGTGGCTTTGA+AGG | - | chr8.4:49259235-49259254 | None:intergenic | 50.0% |
| !! | CCGGTTTGGAAAGATGGTTC+TGG | - | chr8.4:49259283-49259302 | None:intergenic | 50.0% |
| ACCAGCGACGGGAACTTCAA+CGG | - | chr8.4:49259602-49259621 | None:intergenic | 55.0% | |
| ACCGGTGACGACGAAGATAC+CGG | - | chr8.4:49259482-49259501 | None:intergenic | 55.0% | |
| ACGCTGCAGCTGTCGTGTAT+TGG | + | chr8.4:49260016-49260035 | MS.gene38964:CDS | 55.0% | |
| ACTAACGGAATCGCGGCTAG+TGG | + | chr8.4:49259850-49259869 | MS.gene38964:CDS | 55.0% | |
| AGAAAACGAGCCACCAGCGA+CGG | - | chr8.4:49259614-49259633 | None:intergenic | 55.0% | |
| CCAAGTGAGGCAACGAGTCA+TGG | - | chr8.4:49259419-49259438 | None:intergenic | 55.0% | |
| CCATGACTCGTTGCCTCACT+TGG | + | chr8.4:49259416-49259435 | MS.gene38964:CDS | 55.0% | |
| GACTCGTTGCCTCACTTGGT+GGG | + | chr8.4:49259420-49259439 | MS.gene38964:CDS | 55.0% | |
| GAGGCAACCAAAGGTTTGGG+GGG | + | chr8.4:49260728-49260747 | MS.gene38964:CDS | 55.0% | |
| GCGTGGGCAGGTGTTTGATA+AGG | - | chr8.4:49259323-49259342 | None:intergenic | 55.0% | |
| GGGACTGCGCTATGGAATTC+TGG | + | chr8.4:49260624-49260643 | MS.gene38964:CDS | 55.0% | |
| TCCGGTATCTTCGTCGTCAC+CGG | + | chr8.4:49259478-49259497 | MS.gene38964:CDS | 55.0% | |
| TGACCATGAACGACCGAGAC+CGG | - | chr8.4:49259716-49259735 | None:intergenic | 55.0% | |
| TGACTCGTTGCCTCACTTGG+TGG | + | chr8.4:49259419-49259438 | MS.gene38964:CDS | 55.0% | |
| ! | ACGGTCTTTTAAGCGTGGGC+AGG | - | chr8.4:49259335-49259354 | None:intergenic | 55.0% |
| ! | GGGGGTTCAGTTGGTTCCAT+GGG | + | chr8.4:49260746-49260765 | MS.gene38964:CDS | 55.0% |
| !! | CTTGCTTTTGGCGCTGTCGT+CGG | + | chr8.4:49259454-49259473 | MS.gene38964:CDS | 55.0% |
| !! | GAAGCTCTTGTTGGTGCTGC+CGG | + | chr8.4:49259694-49259713 | MS.gene38964:CDS | 55.0% |
| !! | GCTTCGTGGCTTTGAAGGTG+CGG | - | chr8.4:49259230-49259249 | None:intergenic | 55.0% |
| AGCCACGAAGCTACTGGCGA+TGG | + | chr8.4:49259239-49259258 | MS.gene38964:CDS | 60.0% | |
| CTCCATCGCCAGTAGCTTCG+TGG | - | chr8.4:49259244-49259263 | None:intergenic | 60.0% | |
| GAAAACGAGCCACCAGCGAC+GGG | - | chr8.4:49259613-49259632 | None:intergenic | 60.0% | |
| GACAGCGCCAAAAGCAAGCC+AGG | - | chr8.4:49259452-49259471 | None:intergenic | 60.0% | |
| GATGGTTGTGGAGGAGGAGG+AGG | - | chr8.4:49259200-49259219 | None:intergenic | 60.0% | |
| GTGGAGGAGGAGGAGGATGT+CGG | - | chr8.4:49259193-49259212 | None:intergenic | 60.0% | |
| GTTGAAGTTCCCGTCGCTGG+TGG | + | chr8.4:49259601-49259620 | MS.gene38964:CDS | 60.0% | |
| ! | GGGGGGTTCAGTTGGTTCCA+TGG | + | chr8.4:49260745-49260764 | MS.gene38964:CDS | 60.0% |
| ! | GTGTTGCTGGGACTGCGCTA+TGG | + | chr8.4:49260616-49260635 | MS.gene38964:CDS | 60.0% |
| !! | CTTGTTGGTGCTGCCGGTCT+CGG | + | chr8.4:49259700-49259719 | MS.gene38964:CDS | 60.0% |
| !! | GCTTTGAAGGTGCGGTGGTG+GGG | - | chr8.4:49259222-49259241 | None:intergenic | 60.0% |
| !! | GGCTTTGAAGGTGCGGTGGT+GGG | - | chr8.4:49259223-49259242 | None:intergenic | 60.0% |
| !! | TCGTGGCTTTGAAGGTGCGG+TGG | - | chr8.4:49259227-49259246 | None:intergenic | 60.0% |
| !! | TGGCTTTGAAGGTGCGGTGG+TGG | - | chr8.4:49259224-49259243 | None:intergenic | 60.0% |
| !! | TTTGGCGCTGTCGTCGGTTC+CGG | + | chr8.4:49259460-49259479 | MS.gene38964:CDS | 60.0% |
| CTGCCGGTCTCGGTCGTTCA+TGG | + | chr8.4:49259710-49259729 | MS.gene38964:CDS | 65.0% | |
| GAGGAGGAGGAGGATGTCGG+TGG | - | chr8.4:49259190-49259209 | None:intergenic | 65.0% | |
| GCCGTTGAAGTTCCCGTCGC+TGG | + | chr8.4:49259598-49259617 | MS.gene38964:CDS | 65.0% | |
| GGGGATGGTTGTGGAGGAGG+AGG | - | chr8.4:49259203-49259222 | None:intergenic | 65.0% | |
| GGTGGGGATGGTTGTGGAGG+AGG | - | chr8.4:49259206-49259225 | None:intergenic | 65.0% | |
| !! | GGTGGTGGGGATGGTTGTGG+AGG | - | chr8.4:49259209-49259228 | None:intergenic | 65.0% |
| !! | TGAAGGTGCGGTGGTGGGGA+TGG | - | chr8.4:49259218-49259237 | None:intergenic | 65.0% |
| !! | TGCGGTGGTGGGGATGGTTG+TGG | - | chr8.4:49259212-49259231 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 49259181 | 49260965 | 49259181 | ID=MS.gene38964 |
| chr8.4 | mRNA | 49259181 | 49260965 | 49259181 | ID=MS.gene38964.t1;Parent=MS.gene38964 |
| chr8.4 | exon | 49259181 | 49260965 | 49259181 | ID=MS.gene38964.t1.exon1;Parent=MS.gene38964.t1 |
| chr8.4 | CDS | 49259181 | 49260965 | 49259181 | ID=cds.MS.gene38964.t1;Parent=MS.gene38964.t1 |
| Gene Sequence |
| Protein sequence |
